data_7EAG # _entry.id 7EAG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7EAG pdb_00007eag 10.2210/pdb7eag/pdb WWPDB D_1300021078 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7EAG _pdbx_database_status.recvd_initial_deposition_date 2021-03-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Huang, L.' 1 ? 'Lilley, D.M.J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 49 _citation.language ? _citation.page_first 5916 _citation.page_last 5924 _citation.title 'Structure and folding of four putative kink turns identified in structured RNA species in a test of structural prediction rules.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkab333 _citation.pdbx_database_id_PubMed 33978763 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, L.' 1 ? primary 'Liao, X.' 2 ? primary 'Li, M.' 3 ? primary 'Wang, J.' 4 ? primary 'Peng, X.' 5 ? primary 'Wilson, T.J.' 6 ? primary 'Lilley, D.M.J.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7EAG _cell.details ? _cell.formula_units_Z ? _cell.length_a 62.769 _cell.length_a_esd ? _cell.length_b 74.908 _cell.length_b_esd ? _cell.length_c 136.595 _cell.length_c_esd ? _cell.volume 642249.400 _cell.volume_esd ? _cell.Z_PDB 48 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EAG _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;RNA (5'-R(*GP*UP*CP*UP*AP*UP*GP*AP*AP*GP*GP*CP*UP*GP*GP*AP*GP*AP*C)-3') ; _entity.formula_weight 6157.722 _entity.pdbx_number_of_molecules 6 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GUCUAUGAAGGCUGGAGAC _entity_poly.pdbx_seq_one_letter_code_can GUCUAUGAAGGCUGGAGAC _entity_poly.pdbx_strand_id C,D,A,B,E,F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 U n 1 3 C n 1 4 U n 1 5 A n 1 6 U n 1 7 G n 1 8 A n 1 9 A n 1 10 G n 1 11 G n 1 12 C n 1 13 U n 1 14 G n 1 15 G n 1 16 A n 1 17 G n 1 18 A n 1 19 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 19 _pdbx_entity_src_syn.organism_scientific 'Clostridium perfringens SM101' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 289380 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7EAG _struct_ref.pdbx_db_accession 7EAG _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7EAG C 1 ? 19 ? 7EAG 1 ? 19 ? 1 19 2 1 7EAG D 1 ? 19 ? 7EAG 1 ? 19 ? 1 19 3 1 7EAG A 1 ? 19 ? 7EAG 1 ? 19 ? 1 19 4 1 7EAG B 1 ? 19 ? 7EAG 1 ? 19 ? 1 19 5 1 7EAG E 1 ? 19 ? 7EAG 1 ? 19 ? 1 19 6 1 7EAG F 1 ? 19 ? 7EAG 1 ? 19 ? 1 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7EAG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Ammonium Acetate, 0.1 M tri-Sodium Citrate dihydrate pH 5.6, 30 % v/v 2-Methyl-2,4-pentanediol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-02-02 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9119 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9119 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 90.11 _reflns.entry_id 7EAG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.40 _reflns.d_resolution_low 65.68 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12955 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0.3 _reflns.percent_possible_obs 99.87 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.3 _reflns.pdbx_Rmerge_I_obs 0.044 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.019 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.44 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 637 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.5 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.717 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.666 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 120.91 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7EAG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.50 _refine.ls_d_res_low 65.68 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11427 _refine.ls_number_reflns_R_free 534 _refine.ls_number_reflns_R_work 10893 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.30 _refine.ls_percent_reflns_R_free 4.67 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2202 _refine.ls_R_factor_R_free 0.2746 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2177 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4CS1 _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 34.0669 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4302 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 65.68 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2040 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2040 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0025 ? 2284 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5913 ? 3556 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0321 ? 470 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0060 ? 95 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.8970 ? 1117 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' d_2 ? ? 0.411143050882 ? ? 1 'Torsion NCS' ? A ? ? ? ens_1 'X-RAY DIFFRACTION' d_3 ? ? 0.992609614896 ? ? 2 'Torsion NCS' ? A ? ? ? ens_1 'X-RAY DIFFRACTION' d_4 ? ? 1.06059745828 ? ? 3 'Torsion NCS' ? A ? ? ? ens_1 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.50 2.75 . . 147 2642 99.43 . . . 0.3752 . 0.3759 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.75 3.15 . . 125 2698 99.02 . . . 0.4059 . 0.3440 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.15 3.97 . . 123 2724 99.37 . . . 0.2906 . 0.2594 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.97 65.68 . . 139 2829 99.40 . . . 0.2427 . 0.1693 . . . . . . . . . . . # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] _struct_ncs_oper.details 1 given -0.999959826119 0.00110777170262 -0.00889488559551 -0.00885587314596 -0.275481920786 0.961265460126 -0.00138551749359 0.96130561434 0.275480663894 31.8817749134 0.075637973885 0.0491836623137 ? 2 given -0.00602047805206 -0.30272940873 -0.953057531807 -0.00491105511014 -0.953054359683 0.302759424341 -0.999969817235 0.00650327453114 0.00425112204516 31.3932336651 -0.0649367647362 52.1631514395 ? 3 given 0.0124307368756 -0.824553273741 -0.565647748642 0.0205876090716 0.565782592849 -0.824297402629 0.99971077174 -0.00139871060194 0.0240086749989 31.036696196 -0.704533957017 19.6566756183 ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details ens_1 d_1 ;chain "C" ; ens_1 d_2 ;chain "D" ; ens_1 d_3 ;chain "E" ; ens_1 d_4 ;chain "F" ; # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id ens_1 d_1 1 . A G . . A C . ? ? ? ? ? ? ? ? ens_1 d_2 1 . B G . . B C . ? ? ? ? ? ? ? ? ens_1 d_3 1 . E G . . E C . ? ? ? ? ? ? ? ? ens_1 d_4 1 . F G . . F C . ? ? ? ? ? ? ? ? # _struct_ncs_ens.id ens_1 _struct_ncs_ens.details ? # loop_ _struct_ncs_ens_gen.ens_id _struct_ncs_ens_gen.dom_id_1 _struct_ncs_ens_gen.dom_id_2 _struct_ncs_ens_gen.oper_id ens_1 d_2 d_1 1 ens_1 d_3 d_1 2 ens_1 d_4 d_1 3 # _struct.entry_id 7EAG _struct.title 'Crystal structure of the RAGATH-18 k-turn' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7EAG _struct_keywords.text 'RNA, motif, kink-turn' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C G 1 N1 ? ? ? 1_555 D C 19 N3 ? ? A G 1 B C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C G 1 N2 ? ? ? 1_555 D C 19 O2 ? ? A G 1 B C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C G 1 O6 ? ? ? 1_555 D C 19 N4 ? ? A G 1 B C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C U 2 N3 ? ? ? 1_555 D A 18 N1 ? ? A U 2 B A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C U 2 O4 ? ? ? 1_555 D A 18 N6 ? ? A U 2 B A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C C 3 N3 ? ? ? 1_555 D G 17 N1 ? ? A C 3 B G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C C 3 N4 ? ? ? 1_555 D G 17 O6 ? ? A C 3 B G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C C 3 O2 ? ? ? 1_555 D G 17 N2 ? ? A C 3 B G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C G 7 N2 ? ? ? 1_555 D A 16 N7 ? ? A G 7 B A 16 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog10 hydrog ? ? C G 7 N3 ? ? ? 1_555 D A 16 N6 ? ? A G 7 B A 16 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog11 hydrog ? ? C A 8 N6 ? ? ? 1_555 D G 15 N3 ? ? A A 8 B G 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog12 hydrog ? ? C A 8 N7 ? ? ? 1_555 D G 15 N2 ? ? A A 8 B G 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog13 hydrog ? ? C A 9 N6 ? ? ? 1_555 D G 14 N3 ? ? A A 9 B G 14 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog14 hydrog ? ? C A 9 N7 ? ? ? 1_555 D G 14 N2 ? ? A A 9 B G 14 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog15 hydrog ? ? C G 10 N1 ? ? ? 1_555 D U 13 O2 ? ? A G 10 B U 13 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? C G 10 O6 ? ? ? 1_555 D U 13 N3 ? ? A G 10 B U 13 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? C G 11 N1 ? ? ? 1_555 D C 12 N3 ? ? A G 11 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C G 11 N2 ? ? ? 1_555 D C 12 O2 ? ? A G 11 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C G 11 O6 ? ? ? 1_555 D C 12 N4 ? ? A G 11 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 19 N3 ? ? C G 1 D C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 19 O2 ? ? C G 1 D C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 19 N4 ? ? C G 1 D C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 2 N3 ? ? ? 1_555 B A 18 N1 ? ? C U 2 D A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 2 O4 ? ? ? 1_555 B A 18 N6 ? ? C U 2 D A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 3 N3 ? ? ? 1_555 B G 17 N1 ? ? C C 3 D G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 3 N4 ? ? ? 1_555 B G 17 O6 ? ? C C 3 D G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 3 O2 ? ? ? 1_555 B G 17 N2 ? ? C C 3 D G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A U 6 N3 ? ? ? 1_555 C A 8 N1 ? ? C U 6 A A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A U 6 O4 ? ? ? 1_555 C A 8 N6 ? ? C U 6 A A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 7 N2 ? ? ? 1_555 B A 16 N7 ? ? C G 7 D A 16 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog31 hydrog ? ? A G 7 N3 ? ? ? 1_555 B A 16 N6 ? ? C G 7 D A 16 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog32 hydrog ? ? A A 8 N6 ? ? ? 1_555 B G 15 N3 ? ? C A 8 D G 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog33 hydrog ? ? A A 8 N7 ? ? ? 1_555 B G 15 N2 ? ? C A 8 D G 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog34 hydrog ? ? A A 9 N6 ? ? ? 1_555 B G 14 N3 ? ? C A 9 D G 14 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog35 hydrog ? ? A A 9 N7 ? ? ? 1_555 B G 14 N2 ? ? C A 9 D G 14 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog36 hydrog ? ? A G 10 N1 ? ? ? 1_555 B U 13 O2 ? ? C G 10 D U 13 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog37 hydrog ? ? A G 10 O6 ? ? ? 1_555 B U 13 N3 ? ? C G 10 D U 13 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog38 hydrog ? ? A G 11 N1 ? ? ? 1_555 B C 12 N3 ? ? C G 11 D C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 11 N2 ? ? ? 1_555 B C 12 O2 ? ? C G 11 D C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 11 O6 ? ? ? 1_555 B C 12 N4 ? ? C G 11 D C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 12 N3 ? ? ? 1_555 B G 11 N1 ? ? C C 12 D G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 12 N4 ? ? ? 1_555 B G 11 O6 ? ? C C 12 D G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 12 O2 ? ? ? 1_555 B G 11 N2 ? ? C C 12 D G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A U 13 N3 ? ? ? 1_555 B G 10 O6 ? ? C U 13 D G 10 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog45 hydrog ? ? A U 13 O2 ? ? ? 1_555 B G 10 N1 ? ? C U 13 D G 10 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog46 hydrog ? ? A G 14 N2 ? ? ? 1_555 B A 9 N7 ? ? C G 14 D A 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog47 hydrog ? ? A G 14 N3 ? ? ? 1_555 B A 9 N6 ? ? C G 14 D A 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog48 hydrog ? ? A G 15 N2 ? ? ? 1_555 B A 8 N7 ? ? C G 15 D A 8 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog49 hydrog ? ? A G 15 N3 ? ? ? 1_555 B A 8 N6 ? ? C G 15 D A 8 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog50 hydrog ? ? A A 16 N6 ? ? ? 1_555 B G 7 N3 ? ? C A 16 D G 7 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog51 hydrog ? ? A A 16 N7 ? ? ? 1_555 B G 7 N2 ? ? C A 16 D G 7 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog52 hydrog ? ? A G 17 N1 ? ? ? 1_555 B C 3 N3 ? ? C G 17 D C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 17 N2 ? ? ? 1_555 B C 3 O2 ? ? C G 17 D C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 17 O6 ? ? ? 1_555 B C 3 N4 ? ? C G 17 D C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A A 18 N1 ? ? ? 1_555 B U 2 N3 ? ? C A 18 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A A 18 N6 ? ? ? 1_555 B U 2 O4 ? ? C A 18 D U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 19 N3 ? ? ? 1_555 B G 1 N1 ? ? C C 19 D G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 19 N4 ? ? ? 1_555 B G 1 O6 ? ? C C 19 D G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A C 19 O2 ? ? ? 1_555 B G 1 N2 ? ? C C 19 D G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B U 6 N3 ? ? ? 1_555 E A 8 N1 ? ? D U 6 E A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B U 6 O4 ? ? ? 1_555 E A 8 N6 ? ? D U 6 E A 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E G 1 N1 ? ? ? 1_555 F C 19 N3 ? ? E G 1 F C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E G 1 N2 ? ? ? 1_555 F C 19 O2 ? ? E G 1 F C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? E G 1 O6 ? ? ? 1_555 F C 19 N4 ? ? E G 1 F C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? E U 2 N3 ? ? ? 1_555 F A 18 N1 ? ? E U 2 F A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? E U 2 O4 ? ? ? 1_555 F A 18 N6 ? ? E U 2 F A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? E C 3 N3 ? ? ? 1_555 F G 17 N1 ? ? E C 3 F G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? E C 3 N4 ? ? ? 1_555 F G 17 O6 ? ? E C 3 F G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? E C 3 O2 ? ? ? 1_555 F G 17 N2 ? ? E C 3 F G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? E G 7 N2 ? ? ? 1_555 F A 16 N7 ? ? E G 7 F A 16 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog71 hydrog ? ? E G 7 N3 ? ? ? 1_555 F A 16 N6 ? ? E G 7 F A 16 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog72 hydrog ? ? E A 8 N6 ? ? ? 1_555 F G 15 N3 ? ? E A 8 F G 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog73 hydrog ? ? E A 8 N7 ? ? ? 1_555 F G 15 N2 ? ? E A 8 F G 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog74 hydrog ? ? E A 9 N6 ? ? ? 1_555 F G 14 N3 ? ? E A 9 F G 14 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog75 hydrog ? ? E A 9 N7 ? ? ? 1_555 F G 14 N2 ? ? E A 9 F G 14 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog76 hydrog ? ? E G 10 N1 ? ? ? 1_555 F U 13 O2 ? ? E G 10 F U 13 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog77 hydrog ? ? E G 10 O6 ? ? ? 1_555 F U 13 N3 ? ? E G 10 F U 13 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog78 hydrog ? ? E G 11 N1 ? ? ? 1_555 F C 12 N3 ? ? E G 11 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? E G 11 N2 ? ? ? 1_555 F C 12 O2 ? ? E G 11 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? E G 11 O6 ? ? ? 1_555 F C 12 N4 ? ? E G 11 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? E C 12 N3 ? ? ? 1_555 F G 11 N1 ? ? E C 12 F G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? E C 12 N4 ? ? ? 1_555 F G 11 O6 ? ? E C 12 F G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? E C 12 O2 ? ? ? 1_555 F G 11 N2 ? ? E C 12 F G 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? E U 13 N3 ? ? ? 1_555 F G 10 O6 ? ? E U 13 F G 10 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog85 hydrog ? ? E U 13 O2 ? ? ? 1_555 F G 10 N1 ? ? E U 13 F G 10 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog86 hydrog ? ? E G 14 N2 ? ? ? 1_555 F A 9 N7 ? ? E G 14 F A 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog87 hydrog ? ? E G 14 N3 ? ? ? 1_555 F A 9 N6 ? ? E G 14 F A 9 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog88 hydrog ? ? E G 15 N2 ? ? ? 1_555 F A 8 N7 ? ? E G 15 F A 8 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog89 hydrog ? ? E G 15 N3 ? ? ? 1_555 F A 8 N6 ? ? E G 15 F A 8 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog90 hydrog ? ? E A 16 N6 ? ? ? 1_555 F G 7 N3 ? ? E A 16 F G 7 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog91 hydrog ? ? E A 16 N7 ? ? ? 1_555 F G 7 N2 ? ? E A 16 F G 7 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog92 hydrog ? ? E G 17 N1 ? ? ? 1_555 F C 3 N3 ? ? E G 17 F C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? E G 17 N2 ? ? ? 1_555 F C 3 O2 ? ? E G 17 F C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? E G 17 O6 ? ? ? 1_555 F C 3 N4 ? ? E G 17 F C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? E A 18 N1 ? ? ? 1_555 F U 2 N3 ? ? E A 18 F U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? E A 18 N6 ? ? ? 1_555 F U 2 O4 ? ? E A 18 F U 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? E C 19 N3 ? ? ? 1_555 F G 1 N1 ? ? E C 19 F G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? E C 19 N4 ? ? ? 1_555 F G 1 O6 ? ? E C 19 F G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? E C 19 O2 ? ? ? 1_555 F G 1 N2 ? ? E C 19 F G 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 7EAG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.015931 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013350 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007321 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 5.12366 3.84317 ? ? 3.49406 27.47979 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G C . n A 1 2 U 2 2 2 U U C . n A 1 3 C 3 3 3 C C C . n A 1 4 U 4 4 4 U U C . n A 1 5 A 5 5 5 A A C . n A 1 6 U 6 6 6 U U C . n A 1 7 G 7 7 7 G G C . n A 1 8 A 8 8 8 A A C . n A 1 9 A 9 9 9 A A C . n A 1 10 G 10 10 10 G G C . n A 1 11 G 11 11 11 G G C . n A 1 12 C 12 12 12 C C C . n A 1 13 U 13 13 13 U U C . n A 1 14 G 14 14 14 G G C . n A 1 15 G 15 15 15 G G C . n A 1 16 A 16 16 16 A A C . n A 1 17 G 17 17 17 G G C . n A 1 18 A 18 18 18 A A C . n A 1 19 C 19 19 19 C C C . n B 1 1 G 1 1 1 G G D . n B 1 2 U 2 2 2 U U D . n B 1 3 C 3 3 3 C C D . n B 1 4 U 4 4 4 U U D . n B 1 5 A 5 5 5 A A D . n B 1 6 U 6 6 6 U U D . n B 1 7 G 7 7 7 G G D . n B 1 8 A 8 8 8 A A D . n B 1 9 A 9 9 9 A A D . n B 1 10 G 10 10 10 G G D . n B 1 11 G 11 11 11 G G D . n B 1 12 C 12 12 12 C C D . n B 1 13 U 13 13 13 U U D . n B 1 14 G 14 14 14 G G D . n B 1 15 G 15 15 15 G G D . n B 1 16 A 16 16 16 A A D . n B 1 17 G 17 17 17 G G D . n B 1 18 A 18 18 18 A A D . n B 1 19 C 19 19 19 C C D . n C 1 1 G 1 1 1 G G A . n C 1 2 U 2 2 2 U U A . n C 1 3 C 3 3 3 C C A . n C 1 4 U 4 4 4 U U A . n C 1 5 A 5 5 5 A A A . n C 1 6 U 6 6 6 U U A . n C 1 7 G 7 7 7 G G A . n C 1 8 A 8 8 8 A A A . n C 1 9 A 9 9 9 A A A . n C 1 10 G 10 10 10 G G A . n C 1 11 G 11 11 11 G G A . n C 1 12 C 12 12 ? ? ? A . n C 1 13 U 13 13 ? ? ? A . n C 1 14 G 14 14 ? ? ? A . n C 1 15 G 15 15 ? ? ? A . n C 1 16 A 16 16 ? ? ? A . n C 1 17 G 17 17 ? ? ? A . n C 1 18 A 18 18 ? ? ? A . n C 1 19 C 19 19 ? ? ? A . n D 1 1 G 1 1 ? ? ? B . n D 1 2 U 2 2 ? ? ? B . n D 1 3 C 3 3 ? ? ? B . n D 1 4 U 4 4 ? ? ? B . n D 1 5 A 5 5 ? ? ? B . n D 1 6 U 6 6 ? ? ? B . n D 1 7 G 7 7 ? ? ? B . n D 1 8 A 8 8 ? ? ? B . n D 1 9 A 9 9 ? ? ? B . n D 1 10 G 10 10 ? ? ? B . n D 1 11 G 11 11 ? ? ? B . n D 1 12 C 12 12 12 C C B . n D 1 13 U 13 13 13 U U B . n D 1 14 G 14 14 14 G G B . n D 1 15 G 15 15 15 G G B . n D 1 16 A 16 16 16 A A B . n D 1 17 G 17 17 17 G G B . n D 1 18 A 18 18 18 A A B . n D 1 19 C 19 19 19 C C B . n E 1 1 G 1 1 1 G G E . n E 1 2 U 2 2 2 U U E . n E 1 3 C 3 3 3 C C E . n E 1 4 U 4 4 4 U U E . n E 1 5 A 5 5 5 A A E . n E 1 6 U 6 6 6 U U E . n E 1 7 G 7 7 7 G G E . n E 1 8 A 8 8 8 A A E . n E 1 9 A 9 9 9 A A E . n E 1 10 G 10 10 10 G G E . n E 1 11 G 11 11 11 G G E . n E 1 12 C 12 12 12 C C E . n E 1 13 U 13 13 13 U U E . n E 1 14 G 14 14 14 G G E . n E 1 15 G 15 15 15 G G E . n E 1 16 A 16 16 16 A A E . n E 1 17 G 17 17 17 G G E . n E 1 18 A 18 18 18 A A E . n E 1 19 C 19 19 19 C C E . n F 1 1 G 1 1 1 G G F . n F 1 2 U 2 2 2 U U F . n F 1 3 C 3 3 3 C C F . n F 1 4 U 4 4 4 U U F . n F 1 5 A 5 5 5 A A F . n F 1 6 U 6 6 6 U U F . n F 1 7 G 7 7 7 G G F . n F 1 8 A 8 8 8 A A F . n F 1 9 A 9 9 9 A A F . n F 1 10 G 10 10 10 G G F . n F 1 11 G 11 11 11 G G F . n F 1 12 C 12 12 12 C C F . n F 1 13 U 13 13 13 U U F . n F 1 14 G 14 14 14 G G F . n F 1 15 G 15 15 15 G G F . n F 1 16 A 16 16 16 A A F . n F 1 17 G 17 17 17 G G F . n F 1 18 A 18 18 18 A A F . n F 1 19 C 19 19 19 C C F . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-06-02 2 'Structure model' 1 1 2021-06-23 3 'Structure model' 1 2 2023-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x,-y,-z 3 -x,y,-z 4 -x,-y,z 5 x+1/2,y+1/2,z+1/2 6 x+1/2,-y+1/2,-z+1/2 7 -x+1/2,y+1/2,-z+1/2 8 -x+1/2,-y+1/2,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 23.7812575685 12.2966465331 6.8322874035 1.14214292788 ? -0.0795809554972 ? -0.0781558012562 ? 0.486249441234 ? -0.0776839367429 ? 1.0627113412 ? 5.25220418062 ? 0.241908866855 ? 0.675420142739 ? 7.31127386131 ? -5.65497476492 ? 4.64219667401 ? -0.0809371876414 ? -0.135459095832 ? 0.611635791456 ? 0.445093400976 ? -0.232134218182 ? -0.586142857452 ? 0.560781578736 ? -0.470171335987 ? 0.12500593477 ? 2 'X-RAY DIFFRACTION' ? refined 8.14858647965 9.73190654753 17.4937932729 1.15852863566 ? -0.15987830854 ? -0.0338057759365 ? 1.52164099792 ? -0.147442110855 ? 0.663540328892 ? 6.63013987835 ? 2.39002197423 ? 5.20967682563 ? 7.49107466966 ? -0.36906263058 ? 6.92088823465 ? 0.305753695328 ? -2.04101802406 ? 1.05747641179 ? 0.978141393278 ? -0.372276719007 ? 0.2791673633 ? -0.795730227401 ? -0.134849445299 ? -0.0371247979875 ? 3 'X-RAY DIFFRACTION' ? refined 7.65323561162 -1.34580379818 9.92462151637 1.2360795655 ? -0.0690528607922 ? -0.0336784008597 ? 1.33940879717 ? 0.204976761913 ? 0.595860289637 ? 5.76675193871 ? -0.64561103187 ? 1.23156452206 ? 9.82505790605 ? 3.10385913373 ? 2.04810917369 ? -0.025771215806 ? -0.0524941894794 ? -0.11988197785 ? -0.953703839291 ? -0.448982587662 ? -0.308176931543 ? -0.472501752158 ? 1.02813165796 ? 0.532723268277 ? 4 'X-RAY DIFFRACTION' ? refined 8.52577927544 7.22941547847 17.2520199891 1.23752750273 ? -0.310552439378 ? -0.149649217631 ? 1.6994350779 ? 0.0207660749492 ? 0.506668399376 ? 6.22719190305 ? -1.34232116529 ? 0.18862923508 ? 4.85451604319 ? -5.64175108825 ? 6.62590096645 ? 0.838869125234 ? -2.57182435929 ? -0.113154315639 ? 1.33955017394 ? -0.334827808061 ? -0.624230424809 ? 0.0860584059438 ? -0.33553948421 ? -0.597697153604 ? 5 'X-RAY DIFFRACTION' ? refined 19.9259242412 19.2352331403 17.904823342 1.25614376737 ? -0.11279568339 ? -0.152451270904 ? 0.9597233582 ? -0.755244608496 ? 1.8075166614 ? 6.53986949699 ? -4.44007492587 ? 4.05832436193 ? 6.66405745778 ? -2.55598690868 ? 5.92357952664 ? -0.710402772225 ? -3.70398014088 ? 1.87002299937 ? 2.3015216404 ? 0.907017622268 ? -0.00393286201902 ? -0.701378341755 ? -1.40667841424 ? 0.616358272655 ? 6 'X-RAY DIFFRACTION' ? refined 28.0698495352 7.5441656654 9.51509149177 1.42813603834 ? 0.108900216406 ? -0.169929541477 ? 0.625337475652 ? 0.0598621867784 ? 1.33110008654 ? 5.56070231675 ? 4.12347645 ? 2.69608259192 ? 4.51380076382 ? 5.34935545597 ? 8.79457597117 ? 0.0947800455256 ? -0.16365894124 ? -0.296005321896 ? 0.584834797133 ? -0.591277910572 ? -0.116839996761 ? 2.04087679022 ? 1.3037955414 ? 0.280269718599 ? 7 'X-RAY DIFFRACTION' ? refined 14.2207170394 30.0268931599 -4.75472421153 0.810193442373 ? 0.0198424441831 ? -0.0454688576564 ? 0.742000208172 ? -0.04158192945 ? 0.84647886883 ? 4.15283914097 ? 3.67831807053 ? 1.11120856657 ? 4.27463643048 ? 3.29367143903 ? 4.4347339541 ? 0.299263989138 ? 0.504500029375 ? -0.294356386251 ? -0.384419854688 ? 0.00470529364422 ? -0.100947728215 ? -0.461725640197 ? -0.315751567167 ? -0.496011401478 ? 8 'X-RAY DIFFRACTION' ? refined 19.4762426374 28.0540369201 -2.69659040587 0.880825349149 ? -0.0570169945856 ? -0.108653708539 ? 0.6238366033 ? -0.0207205821169 ? 1.05930912402 ? 5.96641765414 ? 1.46756940721 ? -0.186095427247 ? 8.34085700959 ? -1.27960528844 ? 5.78226614325 ? -0.119346188728 ? 0.0801176080042 ? -2.12864550622 ? -0.401190985202 ? 0.039077535349 ? -0.133959672738 ? 0.709328392088 ? -0.590221779481 ? 0.128714927155 ? 9 'X-RAY DIFFRACTION' ? refined 26.8146008477 -8.99430580051 28.7485609002 1.37500264982 ? 0.0994103199844 ? -0.197376694695 ? 1.04000409394 ? 0.22782359285 ? 1.76169970369 ? 6.91015389659 ? 5.54321634012 ? -2.33493752283 ? 4.5021906192 ? -2.33146930939 ? 7.67702711783 ? -0.142776235688 ? -0.72469840949 ? -3.30377753923 ? 1.02249229969 ? 0.574075919904 ? -2.45548036294 ? 0.575242351493 ? -0.103609694395 ? -0.532759218079 ? 10 'X-RAY DIFFRACTION' ? refined 15.6309885539 -10.4999164524 29.342002004 1.21402501313 ? -0.227773928332 ? -0.136816585755 ? 1.49887522674 ? 0.534312142804 ? 1.45686828455 ? 2.33564894935 ? 2.44188031874 ? -3.30478791957 ? 7.08985002373 ? -1.89966658395 ? 9.22905657739 ? -0.289153915338 ? -1.37900087088 ? -1.89690890613 ? 0.371957633989 ? 0.386643650343 ? -0.975341361991 ? 0.776476766258 ? -0.854307174924 ? 0.493993263932 ? 11 'X-RAY DIFFRACTION' ? refined 5.16860037765 -4.42132921275 40.7910046267 1.83429595835 ? 0.0519739993427 ? 0.257733769714 ? 2.19898269665 ? 0.534774352768 ? 1.06434517143 ? 3.86119049283 ? 3.63584179774 ? -1.78130570927 ? 5.0705279552 ? -0.439131909736 ? 3.7993973721 ? -0.166112490666 ? -0.561329530129 ? -0.34324967195 ? 0.96374875374 ? -0.333762970669 ? 1.60652036889 ? -0.940878272598 ? -0.265739153809 ? -0.1609604919 ? 12 'X-RAY DIFFRACTION' ? refined 20.0747957949 -3.81730946302 47.0320389432 2.25028097717 ? 0.407971517443 ? -0.255767105638 ? 1.92134950578 ? 0.337104131455 ? 1.04160716484 ? 3.93371534427 ? 3.04872082628 ? 1.05297299091 ? 7.15167627876 ? -2.86657416035 ? 7.68900674156 ? 1.34393553527 ? -1.83708059437 ? -0.0519047091458 ? 1.25093796561 ? 0.00422683560386 ? 0.454522031254 ? 0.425079573122 ? -1.39243400233 ? -0.890994540841 ? 13 'X-RAY DIFFRACTION' ? refined 22.3473615576 4.13059810887 42.9958216 1.78176007572 ? 0.357242137051 ? 0.130710586571 ? 1.85591339681 ? 0.137767166852 ? 1.39880510895 ? 5.78607656711 ? 5.2982450901 ? -5.79450918985 ? 4.9854981248 ? -4.89731268161 ? 6.54518633508 ? 0.501202734126 ? 0.11967013835 ? 4.13834161872 ? -0.26983613251 ? 0.242743654589 ? 1.01462211676 ? 0.422643799522 ? -0.867506944549 ? -0.50142557545 ? 14 'X-RAY DIFFRACTION' ? refined 12.602654604 -2.09213823336 42.9924117267 1.90967295992 ? 0.35591112606 ? 0.0919156951088 ? 2.03236486729 ? 0.590045957833 ? 1.11011728397 ? 7.87379204214 ? 2.08136416687 ? -0.129007247018 ? 5.80732547501 ? 3.80336194386 ? 2.80971569391 ? 0.342481269905 ? -1.67783306088 ? 0.97377480557 ? -0.471541091483 ? 0.54980404373 ? 1.0881114613 ? 1.84410703148 ? 0.122671380718 ? -0.934838373957 ? 15 'X-RAY DIFFRACTION' ? refined 7.95776748443 -13.0332744817 31.9124245502 2.03392599714 ? -0.465882660164 ? -0.0873207772246 ? 1.94172972025 ? 0.614105698224 ? 1.05226372034 ? 7.02989489516 ? -1.96907717735 ? -2.27643608112 ? 0.535661501867 ? 0.219019694601 ? 8.20202032751 ? -0.479668083392 ? -0.720869045183 ? -3.11681673333 ? 1.15561384158 ? 0.546145740351 ? 0.931317323522 ? 2.33760416395 ? -2.08979849232 ? -0.280242938587 ? 16 'X-RAY DIFFRACTION' ? refined 19.9494394946 -4.39002240656 24.9389568361 1.58021351645 ? 0.0401752765172 ? 0.105529408761 ? 1.45212072265 ? 0.243197559857 ? 1.26926172901 ? 4.27861794391 ? 6.15097184812 ? 1.89132100707 ? 8.98728476879 ? 4.29110550646 ? 8.73030122205 ? 0.250492137043 ? 2.13359437258 ? 0.421934556554 ? 0.127092692843 ? 0.838226826659 ? 1.45469226644 ? 2.07470550239 ? -0.559372676504 ? -0.876864180162 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? C 1 ? A ? C 10 ? ? ;chain 'C' and (resid 1 through 10 ) ; 2 'X-RAY DIFFRACTION' 2 A ? C 11 ? A ? C 19 ? ? ;chain 'C' and (resid 11 through 19 ) ; 3 'X-RAY DIFFRACTION' 3 B ? D 1 ? B ? D 5 ? ? ;chain 'D' and (resid 1 through 5 ) ; 4 'X-RAY DIFFRACTION' 4 B ? D 6 ? B ? D 10 ? ? ;chain 'D' and (resid 6 through 10 ) ; 5 'X-RAY DIFFRACTION' 5 B ? D 11 ? B ? D 15 ? ? ;chain 'D' and (resid 11 through 15 ) ; 6 'X-RAY DIFFRACTION' 6 B ? D 16 ? B ? D 19 ? ? ;chain 'D' and (resid 16 through 19 ) ; 7 'X-RAY DIFFRACTION' 7 C ? A 1 ? C ? A 11 ? ? ;chain 'A' and (resid 1 through 11 ) ; 8 'X-RAY DIFFRACTION' 8 D ? B 12 ? D ? B 19 ? ? ;chain 'B' and (resid 12 through 19 ) ; 9 'X-RAY DIFFRACTION' 9 E ? E 1 ? E ? E 5 ? ? ;chain 'E' and (resid 1 through 5 ) ; 10 'X-RAY DIFFRACTION' 10 E ? E 6 ? E ? E 10 ? ? ;chain 'E' and (resid 6 through 10 ) ; 11 'X-RAY DIFFRACTION' 11 E ? E 11 ? E ? E 15 ? ? ;chain 'E' and (resid 11 through 15 ) ; 12 'X-RAY DIFFRACTION' 12 E ? E 16 ? E ? E 19 ? ? ;chain 'E' and (resid 16 through 19 ) ; 13 'X-RAY DIFFRACTION' 13 F ? F 1 ? F ? F 5 ? ? ;chain 'F' and (resid 1 through 5 ) ; 14 'X-RAY DIFFRACTION' 14 F ? F 6 ? F ? F 10 ? ? ;chain 'F' and (resid 6 through 10 ) ; 15 'X-RAY DIFFRACTION' 15 F ? F 11 ? F ? F 15 ? ? ;chain 'F' and (resid 11 through 15 ) ; 16 'X-RAY DIFFRACTION' 16 F ? F 16 ? F ? F 19 ? ? ;chain 'F' and (resid 16 through 19 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.1_4122 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A C 12 ? C C 12 2 1 Y 1 A U 13 ? C U 13 3 1 Y 1 A G 14 ? C G 14 4 1 Y 1 A G 15 ? C G 15 5 1 Y 1 A A 16 ? C A 16 6 1 Y 1 A G 17 ? C G 17 7 1 Y 1 A A 18 ? C A 18 8 1 Y 1 A C 19 ? C C 19 9 1 Y 1 B G 1 ? D G 1 10 1 Y 1 B U 2 ? D U 2 11 1 Y 1 B C 3 ? D C 3 12 1 Y 1 B U 4 ? D U 4 13 1 Y 1 B A 5 ? D A 5 14 1 Y 1 B U 6 ? D U 6 15 1 Y 1 B G 7 ? D G 7 16 1 Y 1 B A 8 ? D A 8 17 1 Y 1 B A 9 ? D A 9 18 1 Y 1 B G 10 ? D G 10 19 1 Y 1 B G 11 ? D G 11 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7EAG 'double helix' 7EAG 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 19 1_555 -0.275 -0.187 -0.167 -4.277 -5.364 1.484 1 C_G1:C19_D C 1 ? D 19 ? 19 1 1 A U 2 1_555 B A 18 1_555 -0.040 -0.172 0.004 1.936 -5.175 3.178 2 C_U2:A18_D C 2 ? D 18 ? 20 1 1 A C 3 1_555 B G 17 1_555 0.184 -0.184 -0.231 3.411 0.231 -0.551 3 C_C3:G17_D C 3 ? D 17 ? 19 1 1 A G 7 1_555 B A 16 1_555 6.496 -4.276 0.662 18.768 17.534 2.029 4 C_G7:A16_D C 7 ? D 16 ? 11 9 1 A A 8 1_555 B G 15 1_555 -6.464 -5.030 0.878 -25.966 10.334 -6.584 5 C_A8:G15_D C 8 ? D 15 ? 11 10 1 A A 9 1_555 B G 14 1_555 -6.623 -4.088 0.283 -0.794 8.618 -3.342 6 C_A9:G14_D C 9 ? D 14 ? 11 9 1 A G 10 1_555 B U 13 1_555 -2.167 -0.310 0.063 6.249 1.729 5.776 7 C_G10:U13_D C 10 ? D 13 ? 28 1 1 A G 11 1_555 B C 12 1_555 -0.184 -0.106 -0.203 -0.758 5.751 1.795 8 C_G11:C12_D C 11 ? D 12 ? 19 1 1 A C 12 1_555 B G 11 1_555 0.176 -0.127 -0.248 2.377 6.977 1.191 9 C_C12:G11_D C 12 ? D 11 ? 19 1 1 A U 13 1_555 B G 10 1_555 2.364 -0.481 -0.297 -3.980 2.359 3.457 10 C_U13:G10_D C 13 ? D 10 ? 28 1 1 A G 14 1_555 B A 9 1_555 6.678 -4.179 -0.187 2.030 10.046 -0.627 11 C_G14:A9_D C 14 ? D 9 ? 11 9 1 A G 15 1_555 B A 8 1_555 6.566 -5.194 0.823 28.235 16.026 -7.318 12 C_G15:A8_D C 15 ? D 8 ? 11 10 1 A A 16 1_555 B G 7 1_555 -5.938 -4.299 1.715 -11.466 12.395 5.126 13 C_A16:G7_D C 16 ? D 7 ? 11 9 1 A G 17 1_555 B C 3 1_555 -0.187 -0.169 -0.205 -2.995 3.855 -0.898 14 C_G17:C3_D C 17 ? D 3 ? 19 1 1 A A 18 1_555 B U 2 1_555 0.038 -0.145 -0.117 2.465 -0.402 1.656 15 C_A18:U2_D C 18 ? D 2 ? 20 1 1 A C 19 1_555 B G 1 1_555 0.241 -0.137 -0.021 3.181 -2.590 0.703 16 C_C19:G1_D C 19 ? D 1 ? 19 1 1 C G 1 1_555 D C 19 1_555 -0.132 -0.154 -0.267 -1.612 1.958 0.575 17 A_G1:C19_B A 1 ? B 19 ? 19 1 1 C U 2 1_555 D A 18 1_555 -0.090 -0.093 -0.338 2.766 2.075 2.553 18 A_U2:A18_B A 2 ? B 18 ? 20 1 1 C C 3 1_555 D G 17 1_555 0.166 -0.176 -0.443 3.034 8.345 -0.295 19 A_C3:G17_B A 3 ? B 17 ? 19 1 1 C G 7 1_555 D A 16 1_555 6.492 -4.412 0.348 21.319 16.376 4.969 20 A_G7:A16_B A 7 ? B 16 ? 11 9 1 C A 8 1_555 A U 6 1_555 0.057 -0.126 0.228 15.079 6.052 -1.036 21 A_A8:U6_C A 8 ? C 6 ? 20 1 1 C A 9 1_555 D G 14 1_555 -6.790 -4.279 0.010 -4.033 1.459 -2.171 22 A_A9:G14_B A 9 ? B 14 ? 11 10 1 C G 10 1_555 D U 13 1_555 -2.204 -0.654 -0.455 -3.697 -1.908 -3.331 23 A_G10:U13_B A 10 ? B 13 ? 28 1 1 C G 11 1_555 D C 12 1_555 -0.178 -0.193 0.106 1.769 -3.218 1.316 24 A_G11:C12_B A 11 ? B 12 ? 19 1 1 E G 1 1_555 F C 19 1_555 -0.205 -0.181 -0.501 -7.287 2.059 0.716 25 E_G1:C19_F E 1 ? F 19 ? 19 1 1 E U 2 1_555 F A 18 1_555 -0.031 -0.177 -0.406 -1.002 7.050 3.603 26 E_U2:A18_F E 2 ? F 18 ? 20 1 1 E C 3 1_555 F G 17 1_555 0.178 -0.147 -0.418 1.339 5.007 0.053 27 E_C3:G17_F E 3 ? F 17 ? 19 1 1 E G 7 1_555 F A 16 1_555 6.322 -4.301 1.198 15.497 12.812 7.878 28 E_G7:A16_F E 7 ? F 16 ? 11 9 1 E A 8 1_555 B U 6 1_555 -0.073 -0.154 0.044 15.246 3.065 7.328 29 E_A8:U6_D E 8 ? D 6 ? 20 1 1 E A 9 1_555 F G 14 1_555 -6.528 -4.016 0.496 -2.099 12.682 0.098 30 E_A9:G14_F E 9 ? F 14 ? 11 9 1 E G 10 1_555 F U 13 1_555 -2.644 -0.505 0.096 6.421 5.251 1.885 31 E_G10:U13_F E 10 ? F 13 ? 28 1 1 E G 11 1_555 F C 12 1_555 -0.187 -0.161 -0.214 -0.057 9.428 0.094 32 E_G11:C12_F E 11 ? F 12 ? 19 1 1 E C 12 1_555 F G 11 1_555 0.192 -0.158 -0.239 3.690 11.715 1.200 33 E_C12:G11_F E 12 ? F 11 ? 19 1 1 E U 13 1_555 F G 10 1_555 1.723 -0.495 -0.400 -3.643 4.020 0.428 34 E_U13:G10_F E 13 ? F 10 ? 28 1 1 E G 14 1_555 F A 9 1_555 6.618 -4.174 -0.059 5.445 9.196 3.953 35 E_G14:A9_F E 14 ? F 9 ? 11 9 1 E G 15 1_555 F A 8 1_555 6.712 -4.962 1.065 27.649 11.323 -0.819 36 E_G15:A8_F E 15 ? F 8 ? 11 10 1 E A 16 1_555 F G 7 1_555 -5.835 -4.093 1.872 -11.596 9.915 6.605 37 E_A16:G7_F E 16 ? F 7 ? 11 9 1 E G 17 1_555 F C 3 1_555 -0.193 -0.183 -0.502 1.540 8.445 -0.887 38 E_G17:C3_F E 17 ? F 3 ? 19 1 1 E A 18 1_555 F U 2 1_555 0.047 -0.134 -0.575 -3.792 0.182 2.676 39 E_A18:U2_F E 18 ? F 2 ? 20 1 1 E C 19 1_555 F G 1 1_555 0.205 -0.136 -0.183 4.546 0.753 0.927 40 E_C19:G1_F E 19 ? F 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 19 1_555 A U 2 1_555 B A 18 1_555 -0.415 -1.891 3.110 -4.362 1.610 29.845 -3.940 -0.041 3.035 3.101 8.405 30.197 1 CC_G1U2:A18C19_DD C 1 ? D 19 ? C 2 ? D 18 ? 1 A U 2 1_555 B A 18 1_555 A C 3 1_555 B G 17 1_555 -0.054 -2.033 3.169 0.101 4.621 32.775 -4.293 0.111 2.863 8.138 -0.177 33.090 2 CC_U2C3:G17A18_DD C 2 ? D 18 ? C 3 ? D 17 ? 1 A G 7 1_555 B A 16 1_555 A A 8 1_555 B G 15 1_555 -1.040 -1.317 4.696 -4.607 -15.725 -8.311 14.154 -6.198 0.746 60.731 -17.791 -18.360 3 CC_G7A8:G15A16_DD C 7 ? D 16 ? C 8 ? D 15 ? 1 A A 8 1_555 B G 15 1_555 A A 9 1_555 B G 14 1_555 -0.224 -0.041 3.208 -11.927 4.249 35.073 -0.625 -1.225 3.094 6.784 19.042 37.220 4 CC_A8A9:G14G15_DD C 8 ? D 15 ? C 9 ? D 14 ? 1 A A 9 1_555 B G 14 1_555 A G 10 1_555 B U 13 1_555 0.963 -1.083 2.946 -2.957 5.645 55.401 -1.444 -1.180 2.782 6.050 3.168 55.738 5 CC_A9G10:U13G14_DD C 9 ? D 14 ? C 10 ? D 13 ? 1 A G 10 1_555 B U 13 1_555 A G 11 1_555 B C 12 1_555 -0.795 -2.054 3.268 -1.522 5.423 39.152 -3.649 1.003 2.996 8.042 2.257 39.539 6 CC_G10G11:C12U13_DD C 10 ? D 13 ? C 11 ? D 12 ? 1 A G 11 1_555 B C 12 1_555 A C 12 1_555 B G 11 1_555 -0.097 -1.858 3.149 0.138 3.462 31.532 -3.993 0.200 2.933 6.347 -0.254 31.717 7 CC_G11C12:G11C12_DD C 11 ? D 12 ? C 12 ? D 11 ? 1 A C 12 1_555 B G 11 1_555 A U 13 1_555 B G 10 1_555 0.678 -1.937 3.258 3.884 7.140 40.567 -3.477 -0.562 2.940 10.174 -5.534 41.340 8 CC_C12U13:G10G11_DD C 12 ? D 11 ? C 13 ? D 10 ? 1 A U 13 1_555 B G 10 1_555 A G 14 1_555 B A 9 1_555 -0.680 -1.016 3.037 4.556 5.817 55.680 -1.379 0.957 2.867 6.197 -4.854 56.129 9 CC_U13G14:A9G10_DD C 13 ? D 10 ? C 14 ? D 9 ? 1 A G 14 1_555 B A 9 1_555 A G 15 1_555 B A 8 1_555 0.217 -0.194 3.090 12.591 6.700 32.666 -1.251 1.398 2.884 11.267 -21.173 35.566 10 CC_G14G15:A8A9_DD C 14 ? D 9 ? C 15 ? D 8 ? 1 A G 15 1_555 B A 8 1_555 A A 16 1_555 B G 7 1_555 1.598 -1.354 5.011 7.535 -26.641 -7.871 9.619 5.166 -0.285 71.627 20.259 -28.762 11 CC_G15A16:G7A8_DD C 15 ? D 8 ? C 16 ? D 7 ? 1 A G 17 1_555 B C 3 1_555 A A 18 1_555 B U 2 1_555 0.112 -1.831 3.150 1.126 2.337 33.646 -3.513 -0.020 3.021 4.031 -1.942 33.743 12 CC_G17A18:U2C3_DD C 17 ? D 3 ? C 18 ? D 2 ? 1 A A 18 1_555 B U 2 1_555 A C 19 1_555 B G 1 1_555 0.538 -1.857 3.361 3.212 2.317 30.731 -3.931 -0.379 3.254 4.349 -6.029 30.979 13 CC_A18C19:G1U2_DD C 18 ? D 2 ? C 19 ? D 1 ? 1 C G 1 1_555 D C 19 1_555 C U 2 1_555 D A 18 1_555 -0.293 -2.140 3.244 -2.165 1.246 27.815 -4.725 0.102 3.160 2.585 4.493 27.925 14 AA_G1U2:A18C19_BB A 1 ? B 19 ? A 2 ? B 18 ? 1 C U 2 1_555 D A 18 1_555 C C 3 1_555 D G 17 1_555 -0.041 -2.116 3.322 -1.364 6.467 33.984 -4.511 -0.133 2.882 10.936 2.306 34.602 15 AA_U2C3:G17A18_BB A 2 ? B 18 ? A 3 ? B 17 ? 1 C G 7 1_555 D A 16 1_555 C A 8 1_555 A U 6 1_555 -4.693 -4.496 3.646 -25.145 -4.458 -10.900 9.410 -9.964 -3.519 11.742 -66.228 -27.731 16 AA_G7A8:U6A16_CB A 7 ? B 16 ? A 8 ? C 6 ? 1 C A 8 1_555 A U 6 1_555 C A 9 1_555 D G 14 1_555 3.091 0.477 3.700 7.991 -0.268 31.602 0.909 -3.776 4.328 -0.482 -14.387 32.572 17 AA_A8A9:G14U6_BC A 8 ? C 6 ? A 9 ? B 14 ? 1 C A 9 1_555 D G 14 1_555 C G 10 1_555 D U 13 1_555 0.106 -0.893 3.354 -5.575 8.099 55.704 -1.402 -0.427 3.183 8.593 5.915 56.497 18 AA_A9G10:U13G14_BB A 9 ? B 14 ? A 10 ? B 13 ? 1 C G 10 1_555 D U 13 1_555 C G 11 1_555 D C 12 1_555 0.230 -1.622 3.156 -3.919 1.065 38.676 -2.560 -0.800 3.075 1.603 5.897 38.880 19 AA_G10G11:C12U13_BB A 10 ? B 13 ? A 11 ? B 12 ? 1 E G 1 1_555 F C 19 1_555 E U 2 1_555 F A 18 1_555 -0.291 -1.815 3.248 -3.385 3.196 29.934 -4.100 -0.106 3.055 6.140 6.504 30.286 20 EE_G1U2:A18C19_FF E 1 ? F 19 ? E 2 ? F 18 ? 1 E U 2 1_555 F A 18 1_555 E C 3 1_555 F G 17 1_555 0.002 -1.963 3.118 0.357 8.466 33.471 -4.468 0.046 2.560 14.415 -0.608 34.497 21 EE_U2C3:G17A18_FF E 2 ? F 18 ? E 3 ? F 17 ? 1 E G 7 1_555 F A 16 1_555 E A 8 1_555 B U 6 1_555 -4.806 -4.498 3.495 -24.310 -11.624 -17.016 8.257 -8.867 -3.393 25.150 -52.600 -31.785 22 EE_G7A8:U6A16_DF E 7 ? F 16 ? E 8 ? D 6 ? 1 E A 8 1_555 B U 6 1_555 E A 9 1_555 F G 14 1_555 2.915 0.616 3.793 6.593 -8.511 35.580 2.353 -3.505 4.005 -13.550 -10.496 37.123 23 EE_A8A9:G14U6_FD E 8 ? D 6 ? E 9 ? F 14 ? 1 E A 9 1_555 F G 14 1_555 E G 10 1_555 F U 13 1_555 0.678 -1.217 2.861 -2.280 6.422 53.497 -1.681 -0.868 2.681 7.101 2.522 53.897 24 EE_A9G10:U13G14_FF E 9 ? F 14 ? E 10 ? F 13 ? 1 E G 10 1_555 F U 13 1_555 E G 11 1_555 F C 12 1_555 -0.645 -1.992 3.277 -0.751 6.685 41.957 -3.400 0.817 2.951 9.264 1.041 42.469 25 EE_G10G11:C12U13_FF E 10 ? F 13 ? E 11 ? F 12 ? 1 E G 11 1_555 F C 12 1_555 E C 12 1_555 F G 11 1_555 0.091 -1.827 3.180 0.222 5.168 32.531 -4.042 -0.126 2.864 9.154 -0.393 32.929 26 EE_G11C12:G11C12_FF E 11 ? F 12 ? E 12 ? F 11 ? 1 E C 12 1_555 F G 11 1_555 E U 13 1_555 F G 10 1_555 0.573 -2.053 3.263 5.396 10.683 38.692 -4.087 -0.266 2.680 15.674 -7.916 40.433 27 EE_C12U13:G10G11_FF E 12 ? F 11 ? E 13 ? F 10 ? 1 E U 13 1_555 F G 10 1_555 E G 14 1_555 F A 9 1_555 -0.041 -0.770 2.984 3.651 6.087 59.800 -1.037 0.203 2.894 6.082 -3.648 60.181 28 EE_U13G14:A9G10_FF E 13 ? F 10 ? E 14 ? F 9 ? 1 E G 14 1_555 F A 9 1_555 E G 15 1_555 F A 8 1_555 0.295 -0.098 3.351 13.639 5.637 34.310 -0.933 1.427 3.184 9.054 -21.906 37.262 29 EE_G14G15:A8A9_FF E 14 ? F 9 ? E 15 ? F 8 ? 1 E G 15 1_555 F A 8 1_555 E A 16 1_555 F G 7 1_555 1.370 -1.550 5.091 10.222 -27.996 -9.520 8.998 4.778 -0.264 68.272 24.928 -31.254 30 EE_G15A16:G7A8_FF E 15 ? F 8 ? E 16 ? F 7 ? 1 E G 17 1_555 F C 3 1_555 E A 18 1_555 F U 2 1_555 -0.153 -1.996 3.412 2.228 9.157 34.350 -4.555 0.564 2.790 15.154 -3.687 35.581 31 EE_G17A18:U2C3_FF E 17 ? F 3 ? E 18 ? F 2 ? 1 E A 18 1_555 F U 2 1_555 E C 19 1_555 F G 1 1_555 0.211 -1.690 3.187 0.062 1.668 29.505 -3.653 -0.402 3.090 3.272 -0.121 29.552 32 EE_A18C19:G1U2_FF E 18 ? F 2 ? E 19 ? F 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Ministry of Education (MoE, China)' China ? 1 'Cancer Research UK' 'United Kingdom' A18604 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4CS1 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'I 2 2 2' _space_group.name_Hall 'I 2 2' _space_group.IT_number 23 _space_group.crystal_system orthorhombic _space_group.id 1 #