HEADER SIGNALING PROTEIN 07-MAR-21 7EAL TITLE THE STRUCTURE OF THE A20-BINDING INHIBITOR OF NF-KB 1 IN COMPLEX WITH TITLE 2 DI-UBIQUITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: DIUBIQUITIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TNFAIP3-INTERACTING PROTEIN 1; COMPND 8 CHAIN: B, C, E, F; COMPND 9 SYNONYM: A20-BINDING INHIBITOR OF NF-KAPPA-B ACTIVATION 1,ABIN-1,HIV- COMPND 10 1 NEF-INTERACTING PROTEIN,NEF-ASSOCIATED FACTOR 1,NAF1,NIP40-1, COMPND 11 VIRION-ASSOCIATED NUCLEAR SHUTTLING PROTEIN,VAN,HVAN; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TNIP1, KIAA0113, NAF1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS M1-UBIQUITIN, NF-KB, UBIQUITIN-BINDING DOMAIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.C.LO,S.C.LIN REVDAT 2 29-NOV-23 7EAL 1 REMARK REVDAT 1 21-JUL-21 7EAL 0 JRNL AUTH J.Y.HONG,S.C.LIN,B.J.KUO,Y.C.LO JRNL TITL STRUCTURAL AND BIOCHEMICAL BASIS FOR HIGHER-ORDER ASSEMBLY JRNL TITL 2 BETWEEN A20-BINDING INHIBITOR OF NF-KAPPA B 1 (ABIN1) AND JRNL TITL 3 M1-LINKED UBIQUITINS. JRNL REF J.MOL.BIOL. V. 433 67116 2021 JRNL REFN ESSN 1089-8638 JRNL PMID 34161781 JRNL DOI 10.1016/J.JMB.2021.167116 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 26576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1301 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 5.1425 0.96 2856 141 0.1957 0.2284 REMARK 3 2 5.1425 - 4.0887 0.99 2831 170 0.1556 0.1832 REMARK 3 3 4.0887 - 3.5739 1.00 2864 140 0.1604 0.1942 REMARK 3 4 3.5739 - 3.2480 1.00 2858 129 0.1823 0.2562 REMARK 3 5 3.2480 - 3.0157 1.00 2856 148 0.1988 0.2466 REMARK 3 6 3.0157 - 2.8382 1.00 2870 135 0.2035 0.2448 REMARK 3 7 2.8382 - 2.6963 1.00 2844 133 0.2062 0.2905 REMARK 3 8 2.6963 - 2.5791 1.00 2801 166 0.2244 0.2671 REMARK 3 9 2.5791 - 2.5000 0.88 2495 139 0.2359 0.2918 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4601 REMARK 3 ANGLE : 0.997 6149 REMARK 3 CHIRALITY : 0.047 705 REMARK 3 PLANARITY : 0.006 805 REMARK 3 DIHEDRAL : 8.177 2936 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 23 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 176.6583 10.4377 37.3774 REMARK 3 T TENSOR REMARK 3 T11: 0.5906 T22: 0.8996 REMARK 3 T33: 0.6571 T12: 0.3224 REMARK 3 T13: 0.0343 T23: 0.2499 REMARK 3 L TENSOR REMARK 3 L11: 2.9529 L22: 5.5481 REMARK 3 L33: 1.2349 L12: -0.2418 REMARK 3 L13: 1.8492 L23: -0.7704 REMARK 3 S TENSOR REMARK 3 S11: -0.4170 S12: -0.4672 S13: -1.0953 REMARK 3 S21: -0.3013 S22: -0.1296 S23: -1.2402 REMARK 3 S31: 1.7672 S32: 0.7676 S33: 0.2007 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 167.6880 12.2797 32.8636 REMARK 3 T TENSOR REMARK 3 T11: 0.4278 T22: 0.3931 REMARK 3 T33: 0.5082 T12: 0.1035 REMARK 3 T13: 0.0507 T23: 0.0552 REMARK 3 L TENSOR REMARK 3 L11: 9.6540 L22: 2.5662 REMARK 3 L33: 5.7471 L12: 2.9065 REMARK 3 L13: -0.2831 L23: 2.0180 REMARK 3 S TENSOR REMARK 3 S11: -0.0524 S12: 0.0358 S13: -1.0823 REMARK 3 S21: -0.0949 S22: 0.1945 S23: -0.2486 REMARK 3 S31: 0.8460 S32: 0.4721 S33: -0.2425 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 173.4262 23.0585 35.9884 REMARK 3 T TENSOR REMARK 3 T11: 0.6365 T22: 0.7532 REMARK 3 T33: 0.4498 T12: 0.0646 REMARK 3 T13: -0.0658 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 3.4437 L22: 2.4699 REMARK 3 L33: 3.8477 L12: 1.7152 REMARK 3 L13: -3.2349 L23: -2.7310 REMARK 3 S TENSOR REMARK 3 S11: 0.1758 S12: -0.4184 S13: 0.8874 REMARK 3 S21: 0.0613 S22: -0.4416 S23: 0.5762 REMARK 3 S31: -1.9043 S32: 0.3113 S33: 0.0968 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 171.4859 16.9546 37.7658 REMARK 3 T TENSOR REMARK 3 T11: 0.3474 T22: 0.7063 REMARK 3 T33: 0.3277 T12: 0.0122 REMARK 3 T13: 0.0130 T23: 0.1271 REMARK 3 L TENSOR REMARK 3 L11: 5.1947 L22: 3.7889 REMARK 3 L33: 1.8289 L12: 1.1100 REMARK 3 L13: -0.7412 L23: 0.1210 REMARK 3 S TENSOR REMARK 3 S11: -0.3720 S12: -0.6582 S13: -0.6239 REMARK 3 S21: 0.1974 S22: 0.0527 S23: -0.6249 REMARK 3 S31: -0.0912 S32: 1.0494 S33: 0.3143 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 141.8186 5.1360 29.1077 REMARK 3 T TENSOR REMARK 3 T11: 0.2040 T22: 0.3269 REMARK 3 T33: 0.4087 T12: -0.0173 REMARK 3 T13: 0.0198 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 2.3353 L22: 2.6794 REMARK 3 L33: 7.7630 L12: 1.8166 REMARK 3 L13: -1.4705 L23: -2.7241 REMARK 3 S TENSOR REMARK 3 S11: 0.2312 S12: -0.7476 S13: 0.9417 REMARK 3 S21: -0.4453 S22: -0.1441 S23: 1.4347 REMARK 3 S31: 0.5285 S32: -0.6186 S33: -0.0616 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 152.6703 9.4038 27.0106 REMARK 3 T TENSOR REMARK 3 T11: 0.3658 T22: 0.3160 REMARK 3 T33: 0.3142 T12: -0.0172 REMARK 3 T13: 0.0397 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 6.6330 L22: 2.7733 REMARK 3 L33: 3.8432 L12: -2.6965 REMARK 3 L13: -4.8797 L23: 1.5634 REMARK 3 S TENSOR REMARK 3 S11: -0.1109 S12: 0.8497 S13: -0.0521 REMARK 3 S21: -0.5166 S22: -0.0897 S23: -0.3402 REMARK 3 S31: -0.1253 S32: -0.2984 S33: 0.1107 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 153.4592 1.0836 28.1405 REMARK 3 T TENSOR REMARK 3 T11: 0.4444 T22: 0.3543 REMARK 3 T33: 0.4981 T12: 0.0533 REMARK 3 T13: -0.0085 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 3.6884 L22: 4.1644 REMARK 3 L33: 3.8996 L12: 1.3269 REMARK 3 L13: 1.5660 L23: -2.8435 REMARK 3 S TENSOR REMARK 3 S11: 0.0041 S12: 0.2871 S13: -0.8536 REMARK 3 S21: 0.6121 S22: 0.1566 S23: -0.8167 REMARK 3 S31: 0.1258 S32: 0.0057 S33: 0.1551 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 148.7340 -0.5469 19.5182 REMARK 3 T TENSOR REMARK 3 T11: 0.5821 T22: 0.3018 REMARK 3 T33: 0.3094 T12: -0.0065 REMARK 3 T13: 0.0084 T23: -0.0812 REMARK 3 L TENSOR REMARK 3 L11: 7.7515 L22: 8.2737 REMARK 3 L33: 6.3270 L12: -1.0314 REMARK 3 L13: -0.8355 L23: -2.6983 REMARK 3 S TENSOR REMARK 3 S11: -0.2158 S12: 0.8640 S13: -0.1316 REMARK 3 S21: -1.5777 S22: -0.0021 S23: -0.0052 REMARK 3 S31: 0.8289 S32: -0.0763 S33: 0.0883 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 149.6675 12.7047 18.9961 REMARK 3 T TENSOR REMARK 3 T11: 0.7119 T22: 0.3274 REMARK 3 T33: 0.3286 T12: 0.0118 REMARK 3 T13: 0.0942 T23: 0.0939 REMARK 3 L TENSOR REMARK 3 L11: 4.6832 L22: 7.2010 REMARK 3 L33: 3.8667 L12: -4.3490 REMARK 3 L13: -3.6212 L23: 5.2304 REMARK 3 S TENSOR REMARK 3 S11: 0.2772 S12: 0.8663 S13: 1.1041 REMARK 3 S21: -1.4438 S22: 0.0824 S23: -0.5357 REMARK 3 S31: -0.5811 S32: -0.2799 S33: -0.1897 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 144.9277 -4.4352 21.3778 REMARK 3 T TENSOR REMARK 3 T11: 0.6275 T22: 0.3376 REMARK 3 T33: 0.2648 T12: 0.0445 REMARK 3 T13: 0.0592 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 8.7641 L22: 3.3793 REMARK 3 L33: 4.5168 L12: -1.5210 REMARK 3 L13: -1.6211 L23: 3.9115 REMARK 3 S TENSOR REMARK 3 S11: -0.0456 S12: 0.5052 S13: -0.3521 REMARK 3 S21: -0.8905 S22: -0.4211 S23: 0.0364 REMARK 3 S31: 0.3242 S32: 0.3146 S33: 0.6156 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 452 THROUGH 513 ) REMARK 3 ORIGIN FOR THE GROUP (A): 139.6150 21.6129 34.5120 REMARK 3 T TENSOR REMARK 3 T11: 0.3741 T22: 0.2743 REMARK 3 T33: 0.3291 T12: 0.0572 REMARK 3 T13: 0.0455 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 1.8768 L22: 0.6493 REMARK 3 L33: 4.0720 L12: 1.1061 REMARK 3 L13: 2.1223 L23: 0.9235 REMARK 3 S TENSOR REMARK 3 S11: -0.1562 S12: -0.2108 S13: 0.1621 REMARK 3 S21: 0.0560 S22: -0.0848 S23: 0.1885 REMARK 3 S31: -0.0995 S32: -0.2770 S33: 0.1915 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 453 THROUGH 513 ) REMARK 3 ORIGIN FOR THE GROUP (A): 137.6110 17.1763 34.2095 REMARK 3 T TENSOR REMARK 3 T11: 0.3796 T22: 0.3057 REMARK 3 T33: 0.3991 T12: -0.0177 REMARK 3 T13: 0.0691 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 3.5665 L22: 1.1093 REMARK 3 L33: 2.3236 L12: -1.1415 REMARK 3 L13: 1.5585 L23: -0.3064 REMARK 3 S TENSOR REMARK 3 S11: -0.0521 S12: -0.0742 S13: -0.5049 REMARK 3 S21: -0.0056 S22: 0.1648 S23: 0.2597 REMARK 3 S31: -0.2776 S32: -0.3564 S33: -0.1711 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.0345 -22.4198 28.2013 REMARK 3 T TENSOR REMARK 3 T11: 0.4433 T22: 0.2751 REMARK 3 T33: 0.2708 T12: -0.0338 REMARK 3 T13: 0.0537 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 7.9705 L22: 7.2058 REMARK 3 L33: 6.9509 L12: 0.7845 REMARK 3 L13: 1.2592 L23: 3.2414 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: -0.4417 S13: 0.9622 REMARK 3 S21: -0.0129 S22: 0.1634 S23: 0.3110 REMARK 3 S31: -0.8817 S32: 0.4608 S33: -0.1878 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 23 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 150.0718 -23.0675 21.0601 REMARK 3 T TENSOR REMARK 3 T11: 0.4922 T22: 0.3630 REMARK 3 T33: 0.3752 T12: 0.0590 REMARK 3 T13: 0.1430 T23: 0.1002 REMARK 3 L TENSOR REMARK 3 L11: 7.3017 L22: 2.1391 REMARK 3 L33: 2.4822 L12: -2.5134 REMARK 3 L13: 1.2722 L23: -0.5965 REMARK 3 S TENSOR REMARK 3 S11: 0.1185 S12: -0.0038 S13: 0.1784 REMARK 3 S21: -0.5831 S22: -0.1822 S23: 1.0659 REMARK 3 S31: -1.0630 S32: -0.7694 S33: -0.0814 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 35 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.1788 -31.0099 24.2788 REMARK 3 T TENSOR REMARK 3 T11: 0.2315 T22: 0.2297 REMARK 3 T33: 0.2436 T12: 0.0128 REMARK 3 T13: 0.0783 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 4.0709 L22: 7.0443 REMARK 3 L33: 6.8832 L12: -0.2771 REMARK 3 L13: 1.2044 L23: -4.5003 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: 0.1168 S13: -0.2105 REMARK 3 S21: -0.1743 S22: 0.2081 S23: -0.0245 REMARK 3 S31: 0.1316 S32: -0.0757 S33: -0.1729 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 66 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 159.7787 -26.1662 15.4959 REMARK 3 T TENSOR REMARK 3 T11: 0.3096 T22: 0.3628 REMARK 3 T33: 0.3362 T12: 0.0051 REMARK 3 T13: 0.1000 T23: -0.0487 REMARK 3 L TENSOR REMARK 3 L11: 0.4260 L22: 1.3509 REMARK 3 L33: 7.9894 L12: -0.0909 REMARK 3 L13: 0.8616 L23: -0.7707 REMARK 3 S TENSOR REMARK 3 S11: 0.0793 S12: -0.1500 S13: -0.0462 REMARK 3 S21: 0.1310 S22: 0.1883 S23: 0.2475 REMARK 3 S31: -0.0690 S32: 0.1255 S33: -0.2588 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 101 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 149.6170 -18.0925 0.2700 REMARK 3 T TENSOR REMARK 3 T11: 0.2084 T22: 0.3098 REMARK 3 T33: 0.2522 T12: -0.0584 REMARK 3 T13: 0.0117 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 4.4214 L22: 9.3958 REMARK 3 L33: 2.6441 L12: -3.7235 REMARK 3 L13: 3.2472 L23: -2.9618 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: -0.1655 S13: -0.1413 REMARK 3 S21: -0.1861 S22: -0.1705 S23: 0.3164 REMARK 3 S31: 0.4737 S32: 0.6724 S33: 0.1190 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 123 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 148.1746 -8.9261 4.1287 REMARK 3 T TENSOR REMARK 3 T11: 0.2391 T22: 0.3515 REMARK 3 T33: 0.3045 T12: 0.0138 REMARK 3 T13: 0.0571 T23: 0.0137 REMARK 3 L TENSOR REMARK 3 L11: 5.3204 L22: 4.0200 REMARK 3 L33: 8.4485 L12: 3.9095 REMARK 3 L13: 2.3507 L23: -1.0306 REMARK 3 S TENSOR REMARK 3 S11: 0.1183 S12: 0.0453 S13: 0.0490 REMARK 3 S21: 0.2104 S22: -0.0495 S23: 0.1999 REMARK 3 S31: -0.2106 S32: -0.0854 S33: -0.0077 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 145 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 136.5489 -13.6230 1.3609 REMARK 3 T TENSOR REMARK 3 T11: 0.4902 T22: 0.5416 REMARK 3 T33: 0.5743 T12: -0.1086 REMARK 3 T13: -0.0065 T23: 0.0437 REMARK 3 L TENSOR REMARK 3 L11: 7.3173 L22: 3.7274 REMARK 3 L33: 4.1590 L12: 0.3513 REMARK 3 L13: 2.6603 L23: 3.5588 REMARK 3 S TENSOR REMARK 3 S11: -0.1965 S12: -0.0905 S13: -0.4884 REMARK 3 S21: -0.2004 S22: 0.0745 S23: 1.6111 REMARK 3 S31: 0.1880 S32: -1.6215 S33: 0.2566 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 155 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 140.5763 -22.8968 1.9749 REMARK 3 T TENSOR REMARK 3 T11: 0.3191 T22: 0.4061 REMARK 3 T33: 0.6627 T12: -0.1478 REMARK 3 T13: -0.0218 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 6.1615 L22: 2.1349 REMARK 3 L33: 7.8251 L12: -2.4984 REMARK 3 L13: -1.5857 L23: -1.7192 REMARK 3 S TENSOR REMARK 3 S11: 0.1739 S12: 0.0196 S13: -0.1542 REMARK 3 S21: 0.3233 S22: 0.4123 S23: 0.9684 REMARK 3 S31: 0.6049 S32: -0.8331 S33: -0.3464 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 166 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 143.9344 -5.6626 -2.3693 REMARK 3 T TENSOR REMARK 3 T11: 0.3561 T22: 0.4468 REMARK 3 T33: 0.4823 T12: 0.0947 REMARK 3 T13: 0.0461 T23: 0.0258 REMARK 3 L TENSOR REMARK 3 L11: 8.3397 L22: 3.3396 REMARK 3 L33: 7.8363 L12: -1.4372 REMARK 3 L13: 0.4075 L23: -4.0371 REMARK 3 S TENSOR REMARK 3 S11: 0.3025 S12: -0.1639 S13: 1.1441 REMARK 3 S21: 0.1327 S22: -0.5011 S23: 1.0811 REMARK 3 S31: -0.8186 S32: -0.8631 S33: 0.2968 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 449 THROUGH 513 ) REMARK 3 ORIGIN FOR THE GROUP (A): 154.7213 -30.7426 -5.4780 REMARK 3 T TENSOR REMARK 3 T11: 0.3630 T22: 0.3794 REMARK 3 T33: 0.3149 T12: 0.0129 REMARK 3 T13: -0.0034 T23: -0.0650 REMARK 3 L TENSOR REMARK 3 L11: 6.1908 L22: 0.8955 REMARK 3 L33: 5.5666 L12: -1.4325 REMARK 3 L13: 5.1452 L23: -2.1209 REMARK 3 S TENSOR REMARK 3 S11: 0.1965 S12: 0.2354 S13: -0.2602 REMARK 3 S21: -0.2977 S22: 0.0042 S23: 0.1623 REMARK 3 S31: 0.1756 S32: -0.1052 S33: -0.1765 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 446 THROUGH 511 ) REMARK 3 ORIGIN FOR THE GROUP (A): 157.9344 -26.4318 -4.3113 REMARK 3 T TENSOR REMARK 3 T11: 0.3319 T22: 0.5075 REMARK 3 T33: 0.3414 T12: 0.0131 REMARK 3 T13: 0.0398 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 3.0451 L22: 0.8597 REMARK 3 L33: 2.6913 L12: 0.0253 REMARK 3 L13: 2.2818 L23: 0.3467 REMARK 3 S TENSOR REMARK 3 S11: -0.0374 S12: 0.3468 S13: 0.0849 REMARK 3 S21: -0.1830 S22: -0.1151 S23: 0.0584 REMARK 3 S31: -0.1864 S32: 0.1664 S33: 0.2105 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7EAL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1300021065. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26579 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5H07 REMARK 200 REMARK 200 REMARK: NEEDLE SHAPE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRATE PH 5.5, 10% ISO-PROPANOL, REMARK 280 20% PEG 400, VAPOR DIFFUSION, TEMPERATURE 255K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.99500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU B 405 REMARK 465 THR B 406 REMARK 465 ARG B 407 REMARK 465 GLN B 408 REMARK 465 ARG B 409 REMARK 465 GLU B 410 REMARK 465 TYR B 411 REMARK 465 GLN B 412 REMARK 465 GLU B 413 REMARK 465 LYS B 414 REMARK 465 GLU B 415 REMARK 465 ILE B 416 REMARK 465 GLN B 417 REMARK 465 ARG B 418 REMARK 465 LEU B 419 REMARK 465 ASN B 420 REMARK 465 LYS B 421 REMARK 465 ALA B 422 REMARK 465 LEU B 423 REMARK 465 GLU B 424 REMARK 465 GLU B 425 REMARK 465 ALA B 426 REMARK 465 LEU B 427 REMARK 465 SER B 428 REMARK 465 ILE B 429 REMARK 465 GLN B 430 REMARK 465 THR B 431 REMARK 465 PRO B 432 REMARK 465 PRO B 433 REMARK 465 SER B 434 REMARK 465 SER B 435 REMARK 465 PRO B 436 REMARK 465 PRO B 437 REMARK 465 THR B 438 REMARK 465 ALA B 439 REMARK 465 PHE B 440 REMARK 465 GLY B 441 REMARK 465 SER B 442 REMARK 465 PRO B 443 REMARK 465 GLU B 444 REMARK 465 GLY B 445 REMARK 465 ALA B 446 REMARK 465 GLY B 447 REMARK 465 ALA B 448 REMARK 465 LEU B 449 REMARK 465 LEU B 450 REMARK 465 ARG B 451 REMARK 465 LEU C 405 REMARK 465 THR C 406 REMARK 465 ARG C 407 REMARK 465 GLN C 408 REMARK 465 ARG C 409 REMARK 465 GLU C 410 REMARK 465 TYR C 411 REMARK 465 GLN C 412 REMARK 465 GLU C 413 REMARK 465 LYS C 414 REMARK 465 GLU C 415 REMARK 465 ILE C 416 REMARK 465 GLN C 417 REMARK 465 ARG C 418 REMARK 465 LEU C 419 REMARK 465 ASN C 420 REMARK 465 LYS C 421 REMARK 465 ALA C 422 REMARK 465 LEU C 423 REMARK 465 GLU C 424 REMARK 465 GLU C 425 REMARK 465 ALA C 426 REMARK 465 LEU C 427 REMARK 465 SER C 428 REMARK 465 ILE C 429 REMARK 465 GLN C 430 REMARK 465 THR C 431 REMARK 465 PRO C 432 REMARK 465 PRO C 433 REMARK 465 SER C 434 REMARK 465 SER C 435 REMARK 465 PRO C 436 REMARK 465 PRO C 437 REMARK 465 THR C 438 REMARK 465 ALA C 439 REMARK 465 PHE C 440 REMARK 465 GLY C 441 REMARK 465 SER C 442 REMARK 465 PRO C 443 REMARK 465 GLU C 444 REMARK 465 GLY C 445 REMARK 465 ALA C 446 REMARK 465 GLY C 447 REMARK 465 ALA C 448 REMARK 465 LEU C 449 REMARK 465 LEU C 450 REMARK 465 ARG C 451 REMARK 465 LYS C 452 REMARK 465 LEU E 405 REMARK 465 THR E 406 REMARK 465 ARG E 407 REMARK 465 GLN E 408 REMARK 465 ARG E 409 REMARK 465 GLU E 410 REMARK 465 TYR E 411 REMARK 465 GLN E 412 REMARK 465 GLU E 413 REMARK 465 LYS E 414 REMARK 465 GLU E 415 REMARK 465 ILE E 416 REMARK 465 GLN E 417 REMARK 465 ARG E 418 REMARK 465 LEU E 419 REMARK 465 ASN E 420 REMARK 465 LYS E 421 REMARK 465 ALA E 422 REMARK 465 LEU E 423 REMARK 465 GLU E 424 REMARK 465 GLU E 425 REMARK 465 ALA E 426 REMARK 465 LEU E 427 REMARK 465 SER E 428 REMARK 465 ILE E 429 REMARK 465 GLN E 430 REMARK 465 THR E 431 REMARK 465 PRO E 432 REMARK 465 PRO E 433 REMARK 465 SER E 434 REMARK 465 SER E 435 REMARK 465 PRO E 436 REMARK 465 PRO E 437 REMARK 465 THR E 438 REMARK 465 ALA E 439 REMARK 465 PHE E 440 REMARK 465 GLY E 441 REMARK 465 SER E 442 REMARK 465 PRO E 443 REMARK 465 GLU E 444 REMARK 465 GLY E 445 REMARK 465 ALA E 446 REMARK 465 GLY E 447 REMARK 465 ALA E 448 REMARK 465 LEU F 405 REMARK 465 THR F 406 REMARK 465 ARG F 407 REMARK 465 GLN F 408 REMARK 465 ARG F 409 REMARK 465 GLU F 410 REMARK 465 TYR F 411 REMARK 465 GLN F 412 REMARK 465 GLU F 413 REMARK 465 LYS F 414 REMARK 465 GLU F 415 REMARK 465 ILE F 416 REMARK 465 GLN F 417 REMARK 465 ARG F 418 REMARK 465 LEU F 419 REMARK 465 ASN F 420 REMARK 465 LYS F 421 REMARK 465 ALA F 422 REMARK 465 LEU F 423 REMARK 465 GLU F 424 REMARK 465 GLU F 425 REMARK 465 ALA F 426 REMARK 465 LEU F 427 REMARK 465 SER F 428 REMARK 465 ILE F 429 REMARK 465 GLN F 430 REMARK 465 THR F 431 REMARK 465 PRO F 432 REMARK 465 PRO F 433 REMARK 465 SER F 434 REMARK 465 SER F 435 REMARK 465 PRO F 436 REMARK 465 PRO F 437 REMARK 465 THR F 438 REMARK 465 ALA F 439 REMARK 465 PHE F 440 REMARK 465 GLY F 441 REMARK 465 SER F 442 REMARK 465 PRO F 443 REMARK 465 GLU F 444 REMARK 465 GLY F 445 REMARK 465 LYS F 512 REMARK 465 ASP F 513 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP C 479 NH2 ARG C 482 2.13 REMARK 500 NZ LYS E 487 OE2 GLU F 486 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG C 475 CD GLU D 16 2956 1.53 REMARK 500 NH2 ARG C 475 CG GLU D 16 2956 1.62 REMARK 500 NH2 ARG C 475 OE2 GLU D 16 2956 1.85 REMARK 500 CZ ARG C 475 OE2 GLU D 16 2956 1.92 REMARK 500 NH1 ARG C 475 OE2 GLU D 16 2956 2.10 REMARK 500 OD1 ASP A 58 NZ LYS E 452 1565 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG C 475 CZ ARG C 475 NH1 -0.094 REMARK 500 GLU D 16 CD GLU D 16 OE1 0.068 REMARK 500 GLU D 16 CD GLU D 16 OE2 -0.105 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 48 CD - CE - NZ ANGL. DEV. = -15.9 DEGREES REMARK 500 ARG A 154 CG - CD - NE ANGL. DEV. = -19.1 DEGREES REMARK 500 ARG C 475 NE - CZ - NH1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG C 475 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG F 475 NH1 - CZ - NH2 ANGL. DEV. = 8.3 DEGREES REMARK 500 ARG F 475 NE - CZ - NH2 ANGL. DEV. = -8.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 174 53.77 -65.73 REMARK 500 GLN B 453 28.22 -146.74 REMARK 500 GLU B 454 9.61 -66.46 REMARK 500 PHE C 511 -80.09 -96.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 201 DBREF 7EAL A 1 176 UNP P0CG48 UBC_HUMAN 1 152 DBREF 7EAL B 405 513 UNP Q15025 TNIP1_HUMAN 405 513 DBREF 7EAL C 405 513 UNP Q15025 TNIP1_HUMAN 405 513 DBREF 7EAL D 1 176 UNP P0CG48 UBC_HUMAN 1 152 DBREF 7EAL E 405 513 UNP Q15025 TNIP1_HUMAN 405 513 DBREF 7EAL F 405 513 UNP Q15025 TNIP1_HUMAN 405 513 SEQADV 7EAL THR B 506 UNP Q15025 ALA 506 CONFLICT SEQADV 7EAL THR C 506 UNP Q15025 ALA 506 CONFLICT SEQADV 7EAL THR E 506 UNP Q15025 ALA 506 CONFLICT SEQADV 7EAL THR F 506 UNP Q15025 ALA 506 CONFLICT SEQRES 1 A 152 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 A 152 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 A 152 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 A 152 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 A 152 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 A 152 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY MET GLN SEQRES 7 A 152 ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE THR LEU SEQRES 8 A 152 GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL LYS ALA SEQRES 9 A 152 LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP GLN GLN SEQRES 10 A 152 ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG SEQRES 11 A 152 THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER THR LEU SEQRES 12 A 152 HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 B 109 LEU THR ARG GLN ARG GLU TYR GLN GLU LYS GLU ILE GLN SEQRES 2 B 109 ARG LEU ASN LYS ALA LEU GLU GLU ALA LEU SER ILE GLN SEQRES 3 B 109 THR PRO PRO SER SER PRO PRO THR ALA PHE GLY SER PRO SEQRES 4 B 109 GLU GLY ALA GLY ALA LEU LEU ARG LYS GLN GLU LEU VAL SEQRES 5 B 109 THR GLN ASN GLU LEU LEU LYS GLN GLN VAL LYS ILE PHE SEQRES 6 B 109 GLU GLU ASP PHE GLN ARG GLU ARG SER ASP ARG GLU ARG SEQRES 7 B 109 MET ASN GLU GLU LYS GLU GLU LEU LYS LYS GLN VAL GLU SEQRES 8 B 109 LYS LEU GLN ALA GLN VAL THR LEU SER ASN THR GLN LEU SEQRES 9 B 109 LYS ALA PHE LYS ASP SEQRES 1 C 109 LEU THR ARG GLN ARG GLU TYR GLN GLU LYS GLU ILE GLN SEQRES 2 C 109 ARG LEU ASN LYS ALA LEU GLU GLU ALA LEU SER ILE GLN SEQRES 3 C 109 THR PRO PRO SER SER PRO PRO THR ALA PHE GLY SER PRO SEQRES 4 C 109 GLU GLY ALA GLY ALA LEU LEU ARG LYS GLN GLU LEU VAL SEQRES 5 C 109 THR GLN ASN GLU LEU LEU LYS GLN GLN VAL LYS ILE PHE SEQRES 6 C 109 GLU GLU ASP PHE GLN ARG GLU ARG SER ASP ARG GLU ARG SEQRES 7 C 109 MET ASN GLU GLU LYS GLU GLU LEU LYS LYS GLN VAL GLU SEQRES 8 C 109 LYS LEU GLN ALA GLN VAL THR LEU SER ASN THR GLN LEU SEQRES 9 C 109 LYS ALA PHE LYS ASP SEQRES 1 D 152 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 D 152 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 D 152 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 D 152 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 D 152 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 D 152 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY MET GLN SEQRES 7 D 152 ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE THR LEU SEQRES 8 D 152 GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL LYS ALA SEQRES 9 D 152 LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP GLN GLN SEQRES 10 D 152 ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG SEQRES 11 D 152 THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER THR LEU SEQRES 12 D 152 HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 E 109 LEU THR ARG GLN ARG GLU TYR GLN GLU LYS GLU ILE GLN SEQRES 2 E 109 ARG LEU ASN LYS ALA LEU GLU GLU ALA LEU SER ILE GLN SEQRES 3 E 109 THR PRO PRO SER SER PRO PRO THR ALA PHE GLY SER PRO SEQRES 4 E 109 GLU GLY ALA GLY ALA LEU LEU ARG LYS GLN GLU LEU VAL SEQRES 5 E 109 THR GLN ASN GLU LEU LEU LYS GLN GLN VAL LYS ILE PHE SEQRES 6 E 109 GLU GLU ASP PHE GLN ARG GLU ARG SER ASP ARG GLU ARG SEQRES 7 E 109 MET ASN GLU GLU LYS GLU GLU LEU LYS LYS GLN VAL GLU SEQRES 8 E 109 LYS LEU GLN ALA GLN VAL THR LEU SER ASN THR GLN LEU SEQRES 9 E 109 LYS ALA PHE LYS ASP SEQRES 1 F 109 LEU THR ARG GLN ARG GLU TYR GLN GLU LYS GLU ILE GLN SEQRES 2 F 109 ARG LEU ASN LYS ALA LEU GLU GLU ALA LEU SER ILE GLN SEQRES 3 F 109 THR PRO PRO SER SER PRO PRO THR ALA PHE GLY SER PRO SEQRES 4 F 109 GLU GLY ALA GLY ALA LEU LEU ARG LYS GLN GLU LEU VAL SEQRES 5 F 109 THR GLN ASN GLU LEU LEU LYS GLN GLN VAL LYS ILE PHE SEQRES 6 F 109 GLU GLU ASP PHE GLN ARG GLU ARG SER ASP ARG GLU ARG SEQRES 7 F 109 MET ASN GLU GLU LYS GLU GLU LEU LYS LYS GLN VAL GLU SEQRES 8 F 109 LYS LEU GLN ALA GLN VAL THR LEU SER ASN THR GLN LEU SEQRES 9 F 109 LYS ALA PHE LYS ASP HET GOL D 201 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *11(H2 O) HELIX 1 AA1 THR A 22 GLY A 35 1 14 HELIX 2 AA2 PRO A 37 ASP A 39 5 3 HELIX 3 AA3 LEU A 56 ASN A 60 5 5 HELIX 4 AA4 THR A 122 GLY A 135 1 14 HELIX 5 AA5 PRO A 137 ASP A 139 5 3 HELIX 6 AA6 GLU B 454 PHE B 511 1 58 HELIX 7 AA7 GLU C 454 ALA C 510 1 57 HELIX 8 AA8 THR D 22 GLY D 35 1 14 HELIX 9 AA9 PRO D 37 ASP D 39 5 3 HELIX 10 AB1 LEU D 56 ASN D 60 5 5 HELIX 11 AB2 THR D 122 GLY D 135 1 14 HELIX 12 AB3 PRO D 137 ASP D 139 5 3 HELIX 13 AB4 LEU D 156 ASN D 160 5 5 HELIX 14 AB5 ARG E 451 ASP E 513 1 63 HELIX 15 AB6 GLY F 447 PHE F 511 1 65 SHEET 1 AA1 5 THR A 12 GLU A 16 0 SHEET 2 AA1 5 GLN A 2 THR A 7 -1 N VAL A 5 O ILE A 13 SHEET 3 AA1 5 THR A 66 LEU A 71 1 O LEU A 67 N LYS A 6 SHEET 4 AA1 5 GLN A 41 PHE A 45 -1 N ILE A 44 O HIS A 68 SHEET 5 AA1 5 LYS A 48 GLN A 49 -1 O LYS A 48 N PHE A 45 SHEET 1 AA2 5 THR A 112 GLU A 116 0 SHEET 2 AA2 5 GLN A 102 LYS A 106 -1 N ILE A 103 O LEU A 115 SHEET 3 AA2 5 THR A 166 LEU A 171 1 O LEU A 167 N LYS A 106 SHEET 4 AA2 5 GLN A 141 PHE A 145 -1 N ARG A 142 O VAL A 170 SHEET 5 AA2 5 LYS A 148 GLN A 149 -1 O LYS A 148 N PHE A 145 SHEET 1 AA3 5 THR D 12 GLU D 16 0 SHEET 2 AA3 5 GLN D 2 THR D 7 -1 N VAL D 5 O ILE D 13 SHEET 3 AA3 5 THR D 66 LEU D 71 1 O LEU D 67 N PHE D 4 SHEET 4 AA3 5 GLN D 41 PHE D 45 -1 N ARG D 42 O VAL D 70 SHEET 5 AA3 5 LYS D 48 GLN D 49 -1 O LYS D 48 N PHE D 45 SHEET 1 AA4 5 THR D 112 VAL D 117 0 SHEET 2 AA4 5 MET D 101 THR D 107 -1 N MET D 101 O VAL D 117 SHEET 3 AA4 5 THR D 166 LEU D 171 1 O LEU D 167 N PHE D 104 SHEET 4 AA4 5 GLN D 141 PHE D 145 -1 N ILE D 144 O HIS D 168 SHEET 5 AA4 5 LYS D 148 GLN D 149 -1 O LYS D 148 N PHE D 145 SITE 1 AC1 3 THR D 107 LEU D 108 LEU D 169 CRYST1 80.753 59.990 84.058 90.00 109.71 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012383 0.000000 0.004437 0.00000 SCALE2 0.000000 0.016669 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012637 0.00000