HEADER TRANSFERASE 11-MAR-21 7EC7 TITLE CRYSTAL STRUCTURE OF SDGB (COMPLEXED WITH PHOSPHATE IONS) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSYL TRANSFERASE, GROUP 1 FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS (STRAIN USA300); SOURCE 3 ORGANISM_TAXID: 367830; SOURCE 4 STRAIN: USA300; SOURCE 5 GENE: SAUSA300_0550; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.-G.KIM,I.BAEK,Y.LEE,H.S.KIM REVDAT 3 29-NOV-23 7EC7 1 REMARK REVDAT 2 12-OCT-22 7EC7 1 JRNL REVDAT 1 16-MAR-22 7EC7 0 JRNL AUTH D.G.KIM,I.BAEK,Y.LEE,H.KIM,J.Y.KIM,G.BANG,S.KIM,H.J.YOON, JRNL AUTH 2 B.W.HAN,S.W.SUH,H.S.KIM JRNL TITL STRUCTURAL BASIS FOR SDGB- AND SDGA-MEDIATED GLYCOSYLATION JRNL TITL 2 OF STAPHYLOCOCCAL ADHESIVE PROTEINS. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 77 1460 2021 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 34726173 JRNL DOI 10.1107/S2059798321010068 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.8 REMARK 3 NUMBER OF REFLECTIONS : 25550 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1357 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2044 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8254 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 4 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.10000 REMARK 3 B22 (A**2) : -0.10000 REMARK 3 B33 (A**2) : 0.34000 REMARK 3 B12 (A**2) : -0.05000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.502 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.317 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.958 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.873 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8507 ; 0.004 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 7863 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11517 ; 1.376 ; 1.645 REMARK 3 BOND ANGLES OTHERS (DEGREES): 18079 ; 1.113 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 987 ; 7.744 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 497 ;33.148 ;22.877 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1439 ;18.186 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 46 ;20.180 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1057 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9601 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2111 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7EC7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1300021129. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 287 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26949 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.0 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7EC1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2 M NAH2PO4, 0.8 M K2HPO4, AND 0.1 M REMARK 280 CAPS-NAOH (PH 10.5), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.78267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.39133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.39133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.78267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -70.78267 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -70.78267 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 497 REMARK 465 GLU A 498 REMARK 465 HIS A 499 REMARK 465 HIS A 500 REMARK 465 HIS A 501 REMARK 465 HIS A 502 REMARK 465 HIS A 503 REMARK 465 HIS A 504 REMARK 465 ILE B 310 REMARK 465 ASP B 311 REMARK 465 LEU B 497 REMARK 465 GLU B 498 REMARK 465 HIS B 499 REMARK 465 HIS B 500 REMARK 465 HIS B 501 REMARK 465 HIS B 502 REMARK 465 HIS B 503 REMARK 465 HIS B 504 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 7 -63.87 -92.75 REMARK 500 TYR A 52 -45.76 -134.35 REMARK 500 ARG A 73 117.78 -37.43 REMARK 500 ASP A 154 -126.13 53.01 REMARK 500 ARG A 224 79.07 -110.82 REMARK 500 SER A 258 58.39 -95.58 REMARK 500 ASN A 271 62.97 -112.58 REMARK 500 THR A 309 133.89 -38.59 REMARK 500 THR A 316 77.58 -101.10 REMARK 500 GLU A 406 -36.09 -130.01 REMARK 500 ASN A 440 43.50 -151.25 REMARK 500 ASN A 447 14.86 52.52 REMARK 500 SER B 8 -166.21 -161.90 REMARK 500 LEU B 39 -64.05 -99.93 REMARK 500 HIS B 98 46.94 -102.14 REMARK 500 GLU B 106 2.43 84.83 REMARK 500 LEU B 109 -63.54 -94.38 REMARK 500 ASP B 154 -127.68 53.90 REMARK 500 ASP B 180 -116.52 54.19 REMARK 500 LEU B 234 34.84 -92.42 REMARK 500 ALA B 255 75.87 -101.51 REMARK 500 SER B 273 -7.65 -58.95 REMARK 500 THR B 316 62.33 -101.16 REMARK 500 SER B 387 -65.38 -100.13 REMARK 500 PHE B 439 -58.85 -127.55 REMARK 500 HIS B 462 75.68 -114.61 REMARK 500 TYR B 480 56.52 -108.81 REMARK 500 REMARK 500 REMARK: NULL DBREF1 7EC7 A 1 496 UNP A0A0H2XGN0_STAA3 DBREF2 7EC7 A A0A0H2XGN0 1 496 DBREF1 7EC7 B 1 496 UNP A0A0H2XGN0_STAA3 DBREF2 7EC7 B A0A0H2XGN0 1 496 SEQADV 7EC7 LEU A 497 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 GLU A 498 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS A 499 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS A 500 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS A 501 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS A 502 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS A 503 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS A 504 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 LEU B 497 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 GLU B 498 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS B 499 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS B 500 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS B 501 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS B 502 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS B 503 UNP A0A0H2XGN EXPRESSION TAG SEQADV 7EC7 HIS B 504 UNP A0A0H2XGN EXPRESSION TAG SEQRES 1 A 504 MSE ASN TYR PHE VAL GLY ASN SER LEU GLY VAL ASN LEU SEQRES 2 A 504 THR GLY ILE GLU LYS ALA ILE ILE ASN ARG LEU ASN LEU SEQRES 3 A 504 PHE LYS GLU MSE GLY ARG PRO ALA GLN CYS VAL PHE LEU SEQRES 4 A 504 SER TRP ASN ARG TYR LEU TYR ARG ASN ALA GLN ASN TYR SEQRES 5 A 504 ILE THR SER SER ASP TYR ILE ASN MSE TYR ASP PHE PHE SEQRES 6 A 504 GLN GLU ALA THR TYR LEU GLU ARG ASN GLU PRO PHE ASP SEQRES 7 A 504 TRP LEU SER TYR TRP THR ASP GLU CYS HIS TYR THR LEU SEQRES 8 A 504 LYS HIS VAL GLU ASN SER HIS ASP PHE ARG ILE TYR ASP SEQRES 9 A 504 GLN GLU ARG PHE LEU MSE TYR ALA HIS PHE GLN ASP PRO SEQRES 10 A 504 LYS TYR ARG ILE LEU ASP TYR VAL ASN HIS PHE ASP SER SEQRES 11 A 504 GLN ARG ARG LYS VAL LYS ARG ASP PHE TYR ASP VAL ARG SEQRES 12 A 504 GLY PHE LEU SER CYS SER ARG ILE LEU VAL ASP LYS GLN SEQRES 13 A 504 GLN THR LEU CYS GLU PHE PHE TYR ASN PRO GLU GLY ASP SEQRES 14 A 504 THR LYS LEU GLU LYS TYR PHE SER TYR LYS ASP GLY LYS SEQRES 15 A 504 PRO GLU VAL GLN LYS ILE ILE VAL TYR TYR ALA ASN LYS SEQRES 16 A 504 GLN TYR PHE PHE ASN ASN GLU THR GLU LEU GLY ALA PHE SEQRES 17 A 504 PHE ILE LYS GLN LEU TYR GLN HIS GLY ASP LEU PHE PHE SEQRES 18 A 504 SER ASP ARG ASN VAL TYR THR ALA PRO ILE PHE ASN LEU SEQRES 19 A 504 THR PRO GLU SER ILE PRO VAL VAL ALA VAL LEU HIS SER SEQRES 20 A 504 THR HIS ILE LYS ASN ILE ASP ALA LEU ASP SER SER PRO SEQRES 21 A 504 PHE LYS ASN VAL TYR LYS ALA MSE PHE GLU ASN LEU SER SEQRES 22 A 504 ARG TYR ARG ALA ILE ILE VAL SER THR GLU GLN GLN LYS SEQRES 23 A 504 LEU ASP VAL GLU LYS ARG ILE ASN HIS THR ILE PRO VAL SEQRES 24 A 504 VAL ASN ILE PRO VAL GLY TYR SER GLU THR ILE ASP THR SEQRES 25 A 504 PRO VAL GLN THR LEU ASP GLN ARG SER VAL LYS LEU ILE SEQRES 26 A 504 SER VAL ALA ARG TYR SER PRO GLU LYS GLN LEU HIS GLN SEQRES 27 A 504 GLN ILE GLU LEU ILE LYS ARG LEU VAL SER TYR VAL PRO SEQRES 28 A 504 LYS ILE GLU LEU HIS MSE TYR GLY PHE GLY SER GLU SER SEQRES 29 A 504 LYS LYS LEU ASN GLU LEU ILE GLN LYS TYR GLY LEU GLU SEQRES 30 A 504 ASN HIS VAL TYR LEU ARG GLY PHE LEU SER ASN LEU ASP SEQRES 31 A 504 GLN GLU TYR SER ASP ALA TYR LEU SER LEU ILE THR SER SEQRES 32 A 504 ASN MSE GLU GLY PHE SER LEU ALA LEU LEU GLU SER LEU SEQRES 33 A 504 ALA HIS GLY VAL PRO VAL ILE SER TYR ASP ILE LYS TYR SEQRES 34 A 504 GLY PRO ASN GLU LEU ILE THR SER ASP PHE ASN GLY TYR SEQRES 35 A 504 LEU ILE THR LYS ASN ASP GLU ASP ALA LEU PHE ASP LYS SEQRES 36 A 504 VAL LYS TYR VAL ILE ASP HIS PRO GLU VAL GLN GLN ARG SEQRES 37 A 504 LEU SER LYS GLY SER LEU ALA LYS ALA GLN GLN TYR SER SEQRES 38 A 504 LYS ALA SER LEU ILE LYS GLN TRP ASP GLN PHE VAL ARG SEQRES 39 A 504 LEU ILE LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 504 MSE ASN TYR PHE VAL GLY ASN SER LEU GLY VAL ASN LEU SEQRES 2 B 504 THR GLY ILE GLU LYS ALA ILE ILE ASN ARG LEU ASN LEU SEQRES 3 B 504 PHE LYS GLU MSE GLY ARG PRO ALA GLN CYS VAL PHE LEU SEQRES 4 B 504 SER TRP ASN ARG TYR LEU TYR ARG ASN ALA GLN ASN TYR SEQRES 5 B 504 ILE THR SER SER ASP TYR ILE ASN MSE TYR ASP PHE PHE SEQRES 6 B 504 GLN GLU ALA THR TYR LEU GLU ARG ASN GLU PRO PHE ASP SEQRES 7 B 504 TRP LEU SER TYR TRP THR ASP GLU CYS HIS TYR THR LEU SEQRES 8 B 504 LYS HIS VAL GLU ASN SER HIS ASP PHE ARG ILE TYR ASP SEQRES 9 B 504 GLN GLU ARG PHE LEU MSE TYR ALA HIS PHE GLN ASP PRO SEQRES 10 B 504 LYS TYR ARG ILE LEU ASP TYR VAL ASN HIS PHE ASP SER SEQRES 11 B 504 GLN ARG ARG LYS VAL LYS ARG ASP PHE TYR ASP VAL ARG SEQRES 12 B 504 GLY PHE LEU SER CYS SER ARG ILE LEU VAL ASP LYS GLN SEQRES 13 B 504 GLN THR LEU CYS GLU PHE PHE TYR ASN PRO GLU GLY ASP SEQRES 14 B 504 THR LYS LEU GLU LYS TYR PHE SER TYR LYS ASP GLY LYS SEQRES 15 B 504 PRO GLU VAL GLN LYS ILE ILE VAL TYR TYR ALA ASN LYS SEQRES 16 B 504 GLN TYR PHE PHE ASN ASN GLU THR GLU LEU GLY ALA PHE SEQRES 17 B 504 PHE ILE LYS GLN LEU TYR GLN HIS GLY ASP LEU PHE PHE SEQRES 18 B 504 SER ASP ARG ASN VAL TYR THR ALA PRO ILE PHE ASN LEU SEQRES 19 B 504 THR PRO GLU SER ILE PRO VAL VAL ALA VAL LEU HIS SER SEQRES 20 B 504 THR HIS ILE LYS ASN ILE ASP ALA LEU ASP SER SER PRO SEQRES 21 B 504 PHE LYS ASN VAL TYR LYS ALA MSE PHE GLU ASN LEU SER SEQRES 22 B 504 ARG TYR ARG ALA ILE ILE VAL SER THR GLU GLN GLN LYS SEQRES 23 B 504 LEU ASP VAL GLU LYS ARG ILE ASN HIS THR ILE PRO VAL SEQRES 24 B 504 VAL ASN ILE PRO VAL GLY TYR SER GLU THR ILE ASP THR SEQRES 25 B 504 PRO VAL GLN THR LEU ASP GLN ARG SER VAL LYS LEU ILE SEQRES 26 B 504 SER VAL ALA ARG TYR SER PRO GLU LYS GLN LEU HIS GLN SEQRES 27 B 504 GLN ILE GLU LEU ILE LYS ARG LEU VAL SER TYR VAL PRO SEQRES 28 B 504 LYS ILE GLU LEU HIS MSE TYR GLY PHE GLY SER GLU SER SEQRES 29 B 504 LYS LYS LEU ASN GLU LEU ILE GLN LYS TYR GLY LEU GLU SEQRES 30 B 504 ASN HIS VAL TYR LEU ARG GLY PHE LEU SER ASN LEU ASP SEQRES 31 B 504 GLN GLU TYR SER ASP ALA TYR LEU SER LEU ILE THR SER SEQRES 32 B 504 ASN MSE GLU GLY PHE SER LEU ALA LEU LEU GLU SER LEU SEQRES 33 B 504 ALA HIS GLY VAL PRO VAL ILE SER TYR ASP ILE LYS TYR SEQRES 34 B 504 GLY PRO ASN GLU LEU ILE THR SER ASP PHE ASN GLY TYR SEQRES 35 B 504 LEU ILE THR LYS ASN ASP GLU ASP ALA LEU PHE ASP LYS SEQRES 36 B 504 VAL LYS TYR VAL ILE ASP HIS PRO GLU VAL GLN GLN ARG SEQRES 37 B 504 LEU SER LYS GLY SER LEU ALA LYS ALA GLN GLN TYR SER SEQRES 38 B 504 LYS ALA SER LEU ILE LYS GLN TRP ASP GLN PHE VAL ARG SEQRES 39 B 504 LEU ILE LEU GLU HIS HIS HIS HIS HIS HIS MODRES 7EC7 MSE A 1 MET MODIFIED RESIDUE MODRES 7EC7 MSE A 30 MET MODIFIED RESIDUE MODRES 7EC7 MSE A 61 MET MODIFIED RESIDUE MODRES 7EC7 MSE A 110 MET MODIFIED RESIDUE MODRES 7EC7 MSE A 268 MET MODIFIED RESIDUE MODRES 7EC7 MSE A 357 MET MODIFIED RESIDUE MODRES 7EC7 MSE A 405 MET MODIFIED RESIDUE MODRES 7EC7 MSE B 1 MET MODIFIED RESIDUE MODRES 7EC7 MSE B 30 MET MODIFIED RESIDUE MODRES 7EC7 MSE B 61 MET MODIFIED RESIDUE MODRES 7EC7 MSE B 110 MET MODIFIED RESIDUE MODRES 7EC7 MSE B 268 MET MODIFIED RESIDUE MODRES 7EC7 MSE B 357 MET MODIFIED RESIDUE MODRES 7EC7 MSE B 405 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 30 8 HET MSE A 61 8 HET MSE A 110 8 HET MSE A 268 8 HET MSE A 357 8 HET MSE A 405 8 HET MSE B 1 8 HET MSE B 30 8 HET MSE B 61 8 HET MSE B 110 8 HET MSE B 268 8 HET MSE B 357 8 HET MSE B 405 8 HET PO4 A 601 5 HET PO4 A 602 5 HET PO4 A 603 5 HET PO4 A 604 5 HET PO4 B 601 5 HET PO4 B 602 5 HET PO4 B 603 5 HET PO4 B 604 5 HET PO4 B 605 5 HET PO4 B 606 5 HET PO4 B 607 5 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 PO4 11(O4 P 3-) FORMUL 14 HOH *4(H2 O) HELIX 1 AA1 THR A 14 GLY A 31 1 18 HELIX 2 AA2 TYR A 44 GLN A 50 1 7 HELIX 3 AA3 MSE A 61 GLN A 66 1 6 HELIX 4 AA4 ASP A 78 GLU A 86 1 9 HELIX 5 AA5 ASN A 201 TYR A 214 1 14 HELIX 6 AA6 ARG A 224 LEU A 234 1 11 HELIX 7 AA7 TYR A 265 ASN A 271 1 7 HELIX 8 AA8 THR A 282 ASN A 294 1 13 HELIX 9 AA9 SER A 331 GLN A 335 5 5 HELIX 10 AB1 LEU A 336 ARG A 345 1 10 HELIX 11 AB2 GLU A 363 TYR A 374 1 12 HELIX 12 AB3 SER A 409 HIS A 418 1 10 HELIX 13 AB4 GLY A 430 ILE A 435 1 6 HELIX 14 AB5 ASP A 448 HIS A 462 1 15 HELIX 15 AB6 HIS A 462 TYR A 480 1 19 HELIX 16 AB7 SER A 481 LEU A 495 1 15 HELIX 17 AB8 THR B 14 GLY B 31 1 18 HELIX 18 AB9 TYR B 44 ALA B 49 1 6 HELIX 19 AC1 MSE B 61 GLN B 66 1 6 HELIX 20 AC2 ASP B 78 GLU B 86 1 9 HELIX 21 AC3 ASN B 201 TYR B 214 1 14 HELIX 22 AC4 ARG B 224 LEU B 234 1 11 HELIX 23 AC5 LYS B 262 GLU B 270 1 9 HELIX 24 AC6 ASN B 271 TYR B 275 5 5 HELIX 25 AC7 THR B 282 ILE B 293 1 12 HELIX 26 AC8 SER B 331 GLN B 335 5 5 HELIX 27 AC9 LEU B 336 VAL B 347 1 12 HELIX 28 AD1 GLU B 363 TYR B 374 1 12 HELIX 29 AD2 SER B 409 HIS B 418 1 10 HELIX 30 AD3 GLY B 430 ILE B 435 1 6 HELIX 31 AD4 ASP B 448 HIS B 462 1 15 HELIX 32 AD5 HIS B 462 GLN B 478 1 17 HELIX 33 AD6 SER B 481 LEU B 495 1 15 SHEET 1 AA1 7 TYR A 58 ASN A 60 0 SHEET 2 AA1 7 ALA A 34 PHE A 38 1 N CYS A 36 O ILE A 59 SHEET 3 AA1 7 ASN A 2 GLY A 6 1 N GLY A 6 O VAL A 37 SHEET 4 AA1 7 LEU A 219 SER A 222 1 O LEU A 219 N TYR A 3 SHEET 5 AA1 7 VAL A 241 VAL A 244 1 O VAL A 244 N SER A 222 SHEET 6 AA1 7 ILE A 278 VAL A 280 1 O ILE A 279 N ALA A 243 SHEET 7 AA1 7 VAL A 299 ASN A 301 1 O VAL A 300 N VAL A 280 SHEET 1 AA210 THR A 90 HIS A 93 0 SHEET 2 AA210 ASP A 99 ASP A 104 -1 O TYR A 103 N THR A 90 SHEET 3 AA210 ARG A 107 PHE A 114 -1 O MSE A 110 N ILE A 102 SHEET 4 AA210 LEU A 122 PHE A 128 -1 O TYR A 124 N HIS A 113 SHEET 5 AA210 LYS A 134 TYR A 140 -1 O LYS A 136 N HIS A 127 SHEET 6 AA210 LEU A 146 VAL A 153 -1 O LEU A 152 N VAL A 135 SHEET 7 AA210 GLN A 157 TYR A 164 -1 O CYS A 160 N ILE A 151 SHEET 8 AA210 THR A 170 LYS A 179 -1 O PHE A 176 N LEU A 159 SHEET 9 AA210 LYS A 182 TYR A 192 -1 O ILE A 189 N GLU A 173 SHEET 10 AA210 LYS A 195 PHE A 199 -1 O TYR A 197 N VAL A 190 SHEET 1 AA3 6 VAL A 380 TYR A 381 0 SHEET 2 AA3 6 ILE A 353 TYR A 358 1 N MSE A 357 O TYR A 381 SHEET 3 AA3 6 VAL A 322 VAL A 327 1 N LEU A 324 O GLU A 354 SHEET 4 AA3 6 ALA A 396 ILE A 401 1 O TYR A 397 N LYS A 323 SHEET 5 AA3 6 VAL A 422 TYR A 425 1 O ILE A 423 N SER A 399 SHEET 6 AA3 6 GLY A 441 ILE A 444 1 O ILE A 444 N SER A 424 SHEET 1 AA4 7 TYR B 58 ASN B 60 0 SHEET 2 AA4 7 ALA B 34 PHE B 38 1 N PHE B 38 O ILE B 59 SHEET 3 AA4 7 ASN B 2 GLY B 6 1 N PHE B 4 O VAL B 37 SHEET 4 AA4 7 LEU B 219 SER B 222 1 O LEU B 219 N TYR B 3 SHEET 5 AA4 7 VAL B 241 VAL B 244 1 O VAL B 242 N SER B 222 SHEET 6 AA4 7 ILE B 278 VAL B 280 1 O ILE B 279 N ALA B 243 SHEET 7 AA4 7 VAL B 299 ASN B 301 1 O VAL B 300 N VAL B 280 SHEET 1 AA510 THR B 90 HIS B 93 0 SHEET 2 AA510 ASP B 99 ASP B 104 -1 O ARG B 101 N LYS B 92 SHEET 3 AA510 ARG B 107 PHE B 114 -1 O MSE B 110 N ILE B 102 SHEET 4 AA510 LEU B 122 PHE B 128 -1 O PHE B 128 N LEU B 109 SHEET 5 AA510 LYS B 134 TYR B 140 -1 O LYS B 136 N HIS B 127 SHEET 6 AA510 LEU B 146 VAL B 153 -1 O CYS B 148 N PHE B 139 SHEET 7 AA510 GLN B 157 TYR B 164 -1 O GLN B 157 N VAL B 153 SHEET 8 AA510 THR B 170 LYS B 179 -1 O PHE B 176 N LEU B 159 SHEET 9 AA510 LYS B 182 TYR B 192 -1 O GLN B 186 N TYR B 175 SHEET 10 AA510 LYS B 195 PHE B 199 -1 O PHE B 199 N ILE B 188 SHEET 1 AA6 6 VAL B 380 TYR B 381 0 SHEET 2 AA6 6 GLU B 354 TYR B 358 1 N LEU B 355 O TYR B 381 SHEET 3 AA6 6 LYS B 323 VAL B 327 1 N LEU B 324 O GLU B 354 SHEET 4 AA6 6 LEU B 398 ILE B 401 1 O LEU B 400 N ILE B 325 SHEET 5 AA6 6 VAL B 422 TYR B 425 1 O ILE B 423 N SER B 399 SHEET 6 AA6 6 LEU B 443 ILE B 444 1 O ILE B 444 N SER B 424 LINK C MSE A 1 N ASN A 2 1555 1555 1.33 LINK C GLU A 29 N MSE A 30 1555 1555 1.34 LINK C MSE A 30 N GLY A 31 1555 1555 1.34 LINK C ASN A 60 N MSE A 61 1555 1555 1.33 LINK C MSE A 61 N TYR A 62 1555 1555 1.34 LINK C LEU A 109 N MSE A 110 1555 1555 1.33 LINK C MSE A 110 N TYR A 111 1555 1555 1.33 LINK C ALA A 267 N MSE A 268 1555 1555 1.34 LINK C MSE A 268 N PHE A 269 1555 1555 1.33 LINK C HIS A 356 N MSE A 357 1555 1555 1.34 LINK C MSE A 357 N TYR A 358 1555 1555 1.34 LINK C ASN A 404 N MSE A 405 1555 1555 1.33 LINK C MSE A 405 N GLU A 406 1555 1555 1.33 LINK C MSE B 1 N ASN B 2 1555 1555 1.33 LINK C GLU B 29 N MSE B 30 1555 1555 1.34 LINK C MSE B 30 N GLY B 31 1555 1555 1.34 LINK C ASN B 60 N MSE B 61 1555 1555 1.34 LINK C MSE B 61 N TYR B 62 1555 1555 1.34 LINK C LEU B 109 N MSE B 110 1555 1555 1.34 LINK C MSE B 110 N TYR B 111 1555 1555 1.34 LINK C ALA B 267 N MSE B 268 1555 1555 1.34 LINK C MSE B 268 N PHE B 269 1555 1555 1.34 LINK C HIS B 356 N MSE B 357 1555 1555 1.34 LINK C MSE B 357 N TYR B 358 1555 1555 1.33 LINK C ASN B 404 N MSE B 405 1555 1555 1.33 LINK C MSE B 405 N GLU B 406 1555 1555 1.33 CISPEP 1 LYS A 428 TYR A 429 0 -24.98 CISPEP 2 LYS B 428 TYR B 429 0 -4.46 CRYST1 172.257 172.257 106.174 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005805 0.003352 0.000000 0.00000 SCALE2 0.000000 0.006703 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009419 0.00000 HETATM 1 N MSE A 1 -79.149 32.851 -41.294 1.00 59.49 N HETATM 2 CA MSE A 1 -78.536 32.403 -40.019 1.00 61.95 C HETATM 3 C MSE A 1 -77.088 32.860 -39.939 1.00 63.27 C HETATM 4 O MSE A 1 -76.353 32.673 -40.908 1.00 63.03 O HETATM 5 CB MSE A 1 -78.614 30.888 -39.847 1.00 62.82 C HETATM 6 CG MSE A 1 -77.795 30.355 -38.700 1.00 65.76 C HETATM 7 SE MSE A 1 -78.635 30.681 -36.973 0.65 72.99 SE HETATM 8 CE MSE A 1 -80.155 29.467 -36.768 1.00 73.71 C