HEADER VIRAL PROTEIN 15-MAR-21 7ED5 TITLE A DUAL MECHANISM OF ACTION OF AT-527 AGAINST SARS-COV-2 POLYMERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POL,RDRP,NON-STRUCTURAL PROTEIN 12,NSP12; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NON-STRUCTURAL PROTEIN 8; COMPND 9 CHAIN: B, D; COMPND 10 SYNONYM: NSP8; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: NON-STRUCTURAL PROTEIN 7; COMPND 14 CHAIN: C; COMPND 15 SYNONYM: NSP7; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: RNA (5'- COMPND 19 R(P*GP*CP*UP*AP*UP*GP*UP*GP*AP*GP*AP*UP*UP*AP*AP*GP*UP*UP*AP*U*(AT9) COMPND 20 )-3'); COMPND 21 CHAIN: I; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 5; COMPND 24 MOLECULE: RNA (5'- COMPND 25 R(P*CP*CP*CP*CP*AP*UP*AP*AP*CP*UP*UP*AP*AP*UP*CP*UP*CP*AP*CP*AP*UP*AP COMPND 26 *GP*C)-3'); COMPND 27 CHAIN: J; COMPND 28 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: REP, 1A-1B; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 10 2; SOURCE 11 ORGANISM_TAXID: 2697049; SOURCE 12 GENE: REP, 1A-1B; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 17 2; SOURCE 18 ORGANISM_TAXID: 2697049; SOURCE 19 GENE: REP, 1A-1B; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 MOL_ID: 4; SOURCE 23 SYNTHETIC: YES; SOURCE 24 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 25 ORGANISM_TAXID: 32630; SOURCE 26 MOL_ID: 5; SOURCE 27 SYNTHETIC: YES; SOURCE 28 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 29 ORGANISM_TAXID: 32630 KEYWDS SARS-COV-2, NSP12, NIRAN, RDRP, AT-9010, AT-527, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR A.SHANNON,V.FATTORINI,B.SAMA,B.SELISKO,M.FERACCI,C.FALCOU,P.GAUFFRE, AUTHOR 2 P.EL KAZZI,A.DELPAL,E.DECROLY,K.ALVAREZ,C.EYDOUX,J.-C.GUILLEMOT, AUTHOR 3 A.MOUSSA,S.GOOD,P.COLLA,K.LIN,J.-P.SOMMADOSSI,Y.X.ZHU,X.D.YAN,H.SHI, AUTHOR 4 F.FERRON,B.CANARD REVDAT 2 10-APR-24 7ED5 1 REMARK REVDAT 1 16-FEB-22 7ED5 0 JRNL AUTH A.SHANNON,V.FATTORINI,B.SAMA,B.SELISKO,M.FERACCI,C.FALCOU, JRNL AUTH 2 P.GAUFFRE,P.EL KAZZI,A.DELPAL,E.DECROLY,K.ALVAREZ,C.EYDOUX, JRNL AUTH 3 J.C.GUILLEMOT,A.MOUSSA,S.S.GOOD,P.LA COLLA,K.LIN, JRNL AUTH 4 J.P.SOMMADOSSI,Y.ZHU,X.YAN,H.SHI,F.FERRON,B.CANARD JRNL TITL A DUAL MECHANISM OF ACTION OF AT-527 AGAINST SARS-COV-2 JRNL TITL 2 POLYMERASE. JRNL REF NAT COMMUN V. 13 621 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 35110538 JRNL DOI 10.1038/S41467-022-28113-1 REMARK 2 REMARK 2 RESOLUTION. 2.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.980 REMARK 3 NUMBER OF PARTICLES : 181669 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7ED5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1300021156. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : NSP12-NSP7-NSP8-RNA-AT9010; REMARK 245 NSP12-NSP7-NSP8; RNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 5.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 161.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 TRP A -14 REMARK 465 SER A -13 REMARK 465 HIS A -12 REMARK 465 PRO A -11 REMARK 465 GLN A -10 REMARK 465 PHE A -9 REMARK 465 GLU A -8 REMARK 465 LYS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 VAL A 930 REMARK 465 LEU A 931 REMARK 465 GLN A 932 REMARK 465 MET B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 ASP B -14 REMARK 465 TYR B -13 REMARK 465 LYS B -12 REMARK 465 ASP B -11 REMARK 465 ASP B -10 REMARK 465 ASP B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 ALA B 1 REMARK 465 ILE B 2 REMARK 465 ALA B 3 REMARK 465 SER B 4 REMARK 465 GLU B 5 REMARK 465 PHE B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 LEU B 9 REMARK 465 PRO B 10 REMARK 465 SER B 11 REMARK 465 TYR B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 PHE B 15 REMARK 465 ALA B 16 REMARK 465 THR B 17 REMARK 465 ALA B 18 REMARK 465 GLN B 19 REMARK 465 GLU B 20 REMARK 465 ALA B 21 REMARK 465 TYR B 22 REMARK 465 GLU B 23 REMARK 465 GLN B 24 REMARK 465 ALA B 25 REMARK 465 VAL B 26 REMARK 465 ALA B 27 REMARK 465 ASN B 28 REMARK 465 GLY B 29 REMARK 465 ASP B 30 REMARK 465 SER B 31 REMARK 465 GLU B 32 REMARK 465 VAL B 33 REMARK 465 VAL B 34 REMARK 465 LEU B 35 REMARK 465 LYS B 36 REMARK 465 LYS B 37 REMARK 465 LEU B 38 REMARK 465 LYS B 39 REMARK 465 LYS B 40 REMARK 465 SER B 41 REMARK 465 LEU B 42 REMARK 465 SER B 193 REMARK 465 ALA B 194 REMARK 465 VAL B 195 REMARK 465 LYS B 196 REMARK 465 LEU B 197 REMARK 465 GLN B 198 REMARK 465 MET C 0 REMARK 465 SER C 1 REMARK 465 GLU C 74 REMARK 465 MET C 75 REMARK 465 LEU C 76 REMARK 465 ASP C 77 REMARK 465 ASN C 78 REMARK 465 ARG C 79 REMARK 465 ALA C 80 REMARK 465 THR C 81 REMARK 465 LEU C 82 REMARK 465 GLN C 83 REMARK 465 GLY C 84 REMARK 465 GLY C 85 REMARK 465 GLY C 86 REMARK 465 GLY C 87 REMARK 465 SER C 88 REMARK 465 GLY C 89 REMARK 465 LEU C 90 REMARK 465 ASN C 91 REMARK 465 ASP C 92 REMARK 465 ILE C 93 REMARK 465 PHE C 94 REMARK 465 GLU C 95 REMARK 465 ALA C 96 REMARK 465 GLN C 97 REMARK 465 LYS C 98 REMARK 465 ILE C 99 REMARK 465 GLU C 100 REMARK 465 TRP C 101 REMARK 465 HIS C 102 REMARK 465 GLU C 103 REMARK 465 HIS C 104 REMARK 465 HIS C 105 REMARK 465 HIS C 106 REMARK 465 HIS C 107 REMARK 465 HIS C 108 REMARK 465 HIS C 109 REMARK 465 MET D -21 REMARK 465 HIS D -20 REMARK 465 HIS D -19 REMARK 465 HIS D -18 REMARK 465 HIS D -17 REMARK 465 HIS D -16 REMARK 465 HIS D -15 REMARK 465 ASP D -14 REMARK 465 TYR D -13 REMARK 465 LYS D -12 REMARK 465 ASP D -11 REMARK 465 ASP D -10 REMARK 465 ASP D -9 REMARK 465 ASP D -8 REMARK 465 LYS D -7 REMARK 465 GLU D -6 REMARK 465 ASN D -5 REMARK 465 LEU D -4 REMARK 465 TYR D -3 REMARK 465 PHE D -2 REMARK 465 GLN D -1 REMARK 465 GLY D 0 REMARK 465 ALA D 1 REMARK 465 ILE D 2 REMARK 465 ALA D 3 REMARK 465 SER D 4 REMARK 465 GLU D 5 REMARK 465 PHE D 6 REMARK 465 SER D 7 REMARK 465 SER D 8 REMARK 465 LEU D 9 REMARK 465 PRO D 10 REMARK 465 SER D 11 REMARK 465 TYR D 12 REMARK 465 ALA D 13 REMARK 465 ALA D 14 REMARK 465 PHE D 15 REMARK 465 ALA D 16 REMARK 465 THR D 17 REMARK 465 ALA D 18 REMARK 465 GLN D 19 REMARK 465 GLU D 20 REMARK 465 ALA D 21 REMARK 465 TYR D 22 REMARK 465 GLU D 23 REMARK 465 GLN D 24 REMARK 465 ALA D 25 REMARK 465 VAL D 26 REMARK 465 ALA D 27 REMARK 465 ASN D 28 REMARK 465 GLY D 29 REMARK 465 ASP D 30 REMARK 465 SER D 31 REMARK 465 GLU D 32 REMARK 465 VAL D 33 REMARK 465 VAL D 34 REMARK 465 LEU D 35 REMARK 465 LYS D 36 REMARK 465 LYS D 37 REMARK 465 ASN D 192 REMARK 465 SER D 193 REMARK 465 ALA D 194 REMARK 465 VAL D 195 REMARK 465 LYS D 196 REMARK 465 LEU D 197 REMARK 465 GLN D 198 REMARK 465 C J 18 REMARK 465 C J 19 REMARK 465 C J 20 REMARK 465 C J 21 REMARK 465 C J 22 REMARK 465 C J 23 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 43 CG OD1 ND2 REMARK 470 SER B 47 OG REMARK 470 LYS D 40 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 246 O PRO A 461 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 A I 31 C3' - O3' - P ANGL. DEV. = -7.2 DEGREES REMARK 500 U I 32 O3' - P - OP2 ANGL. DEV. = 11.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 52 -144.13 -102.29 REMARK 500 CYS A 53 93.32 58.69 REMARK 500 ILE A 106 -60.74 -92.03 REMARK 500 ASP A 154 -0.70 66.13 REMARK 500 ASP A 161 76.28 -102.68 REMARK 500 PHE A 165 -4.59 67.66 REMARK 500 VAL A 166 -60.75 -122.66 REMARK 500 ASN A 168 72.44 53.77 REMARK 500 PRO A 169 9.20 -68.89 REMARK 500 VAL A 174 -27.74 69.04 REMARK 500 ASP A 218 84.96 56.99 REMARK 500 ASP A 221 31.95 -97.04 REMARK 500 THR A 225 -169.02 -126.57 REMARK 500 LEU A 251 52.96 -90.90 REMARK 500 TRP A 268 125.77 68.90 REMARK 500 ASP A 304 -18.23 66.75 REMARK 500 VAL A 398 -63.36 -98.73 REMARK 500 ASP A 454 49.08 -82.07 REMARK 500 LYS A 500 -68.85 -97.11 REMARK 500 SER A 501 -39.57 -135.08 REMARK 500 ALA A 502 -3.98 69.42 REMARK 500 LEU A 576 -5.94 67.37 REMARK 500 SER A 607 -120.77 42.46 REMARK 500 TYR A 619 75.05 53.70 REMARK 500 ASP A 623 -6.45 73.24 REMARK 500 HIS A 642 23.45 -144.37 REMARK 500 SER A 664 33.96 -95.81 REMARK 500 ASP A 684 -103.67 -78.78 REMARK 500 ALA A 685 -25.83 -143.94 REMARK 500 GLN A 698 -5.56 67.05 REMARK 500 PHE A 745 -19.97 69.62 REMARK 500 ASP A 760 -3.53 68.51 REMARK 500 ASN A 790 -3.63 -140.71 REMARK 500 ARG A 858 -19.38 75.23 REMARK 500 MET A 906 -131.21 -80.53 REMARK 500 ASN A 909 -103.30 -104.63 REMARK 500 ASP A 910 19.58 57.33 REMARK 500 SER B 151 -131.54 54.36 REMARK 500 ALA B 152 -172.07 50.67 REMARK 500 PRO B 183 56.01 -93.82 REMARK 500 ARG C 21 64.65 60.72 REMARK 500 LYS D 82 75.69 -100.22 REMARK 500 ALA D 126 144.66 66.36 REMARK 500 THR D 141 -93.11 -88.99 REMARK 500 THR D 145 -8.01 58.68 REMARK 500 THR D 148 -128.48 51.82 REMARK 500 TYR D 149 126.55 62.94 REMARK 500 SER D 151 22.94 49.99 REMARK 500 ALA D 152 -169.02 -126.33 REMARK 500 ASP D 161 -160.98 -78.52 REMARK 500 REMARK 500 THIS ENTRY HAS 62 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TRP B 182 PRO B 183 147.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 AT9 I 101 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1003 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 209 OD1 REMARK 620 2 ASP A 218 OD2 85.0 REMARK 620 3 AT9 A1004 O3A 168.1 99.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1007 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 218 OD1 REMARK 620 2 ASP A 218 OD2 57.2 REMARK 620 3 AT9 A1004 O3B 79.5 75.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 295 ND1 REMARK 620 2 CYS A 301 SG 100.5 REMARK 620 3 CYS A 306 SG 101.3 119.2 REMARK 620 4 CYS A 310 SG 99.5 109.4 121.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 487 SG REMARK 620 2 HIS A 642 ND1 117.2 REMARK 620 3 CYS A 645 SG 113.0 74.3 REMARK 620 4 CYS A 646 SG 110.0 124.3 112.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1006 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 618 O REMARK 620 2 ASP A 618 OD2 64.9 REMARK 620 3 AT9 A1005 O3A 166.1 128.8 REMARK 620 4 AT9 A1005 O3B 133.2 97.9 53.5 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-31061 RELATED DB: EMDB REMARK 900 SARS-COV-2 NSP12-NSP7-NSP8/RNA COMPLEX BOUND TO INHIBITOR DBREF 7ED5 A 1 932 UNP P0DTD1 R1AB_SARS2 4393 5324 DBREF 7ED5 B 1 198 UNP P0DTD1 R1AB_SARS2 3943 4140 DBREF 7ED5 C 1 83 UNP P0DTD1 R1AB_SARS2 3860 3942 DBREF 7ED5 D 1 198 UNP P0DTD1 R1AB_SARS2 3943 4140 DBREF 7ED5 I 13 32 PDB 7ED5 7ED5 13 32 DBREF 7ED5 J 18 47 PDB 7ED5 7ED5 18 47 SEQADV 7ED5 MET A -23 UNP P0DTD1 INITIATING METHIONINE SEQADV 7ED5 HIS A -22 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS A -21 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS A -20 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS A -19 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS A -18 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS A -17 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS A -16 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS A -15 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 TRP A -14 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 SER A -13 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS A -12 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 PRO A -11 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLN A -10 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 PHE A -9 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLU A -8 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LYS A -7 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLU A -6 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASN A -5 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LEU A -4 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 TYR A -3 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 PHE A -2 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLN A -1 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLY A 0 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 MET B -21 UNP P0DTD1 INITIATING METHIONINE SEQADV 7ED5 HIS B -20 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS B -19 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS B -18 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS B -17 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS B -16 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS B -15 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP B -14 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 TYR B -13 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LYS B -12 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP B -11 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP B -10 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP B -9 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP B -8 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LYS B -7 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLU B -6 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASN B -5 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LEU B -4 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 TYR B -3 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 PHE B -2 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLN B -1 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLY B 0 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 MET C 0 UNP P0DTD1 INITIATING METHIONINE SEQADV 7ED5 GLY C 84 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLY C 85 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLY C 86 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLY C 87 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 SER C 88 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLY C 89 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LEU C 90 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASN C 91 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP C 92 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ILE C 93 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 PHE C 94 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLU C 95 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ALA C 96 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLN C 97 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LYS C 98 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ILE C 99 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLU C 100 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 TRP C 101 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS C 102 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLU C 103 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS C 104 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS C 105 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS C 106 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS C 107 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS C 108 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS C 109 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 MET D -21 UNP P0DTD1 INITIATING METHIONINE SEQADV 7ED5 HIS D -20 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS D -19 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS D -18 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS D -17 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS D -16 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 HIS D -15 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP D -14 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 TYR D -13 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LYS D -12 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP D -11 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP D -10 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP D -9 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASP D -8 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LYS D -7 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLU D -6 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 ASN D -5 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 LEU D -4 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 TYR D -3 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 PHE D -2 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLN D -1 UNP P0DTD1 EXPRESSION TAG SEQADV 7ED5 GLY D 0 UNP P0DTD1 EXPRESSION TAG SEQRES 1 A 956 MET HIS HIS HIS HIS HIS HIS HIS HIS TRP SER HIS PRO SEQRES 2 A 956 GLN PHE GLU LYS GLU ASN LEU TYR PHE GLN GLY SER ALA SEQRES 3 A 956 ASP ALA GLN SER PHE LEU ASN ARG VAL CYS GLY VAL SER SEQRES 4 A 956 ALA ALA ARG LEU THR PRO CYS GLY THR GLY THR SER THR SEQRES 5 A 956 ASP VAL VAL TYR ARG ALA PHE ASP ILE TYR ASN ASP LYS SEQRES 6 A 956 VAL ALA GLY PHE ALA LYS PHE LEU LYS THR ASN CYS CYS SEQRES 7 A 956 ARG PHE GLN GLU LYS ASP GLU ASP ASP ASN LEU ILE ASP SEQRES 8 A 956 SER TYR PHE VAL VAL LYS ARG HIS THR PHE SER ASN TYR SEQRES 9 A 956 GLN HIS GLU GLU THR ILE TYR ASN LEU LEU LYS ASP CYS SEQRES 10 A 956 PRO ALA VAL ALA LYS HIS ASP PHE PHE LYS PHE ARG ILE SEQRES 11 A 956 ASP GLY ASP MET VAL PRO HIS ILE SER ARG GLN ARG LEU SEQRES 12 A 956 THR LYS TYR THR MET ALA ASP LEU VAL TYR ALA LEU ARG SEQRES 13 A 956 HIS PHE ASP GLU GLY ASN CYS ASP THR LEU LYS GLU ILE SEQRES 14 A 956 LEU VAL THR TYR ASN CYS CYS ASP ASP ASP TYR PHE ASN SEQRES 15 A 956 LYS LYS ASP TRP TYR ASP PHE VAL GLU ASN PRO ASP ILE SEQRES 16 A 956 LEU ARG VAL TYR ALA ASN LEU GLY GLU ARG VAL ARG GLN SEQRES 17 A 956 ALA LEU LEU LYS THR VAL GLN PHE CYS ASP ALA MET ARG SEQRES 18 A 956 ASN ALA GLY ILE VAL GLY VAL LEU THR LEU ASP ASN GLN SEQRES 19 A 956 ASP LEU ASN GLY ASN TRP TYR ASP PHE GLY ASP PHE ILE SEQRES 20 A 956 GLN THR THR PRO GLY SER GLY VAL PRO VAL VAL ASP SER SEQRES 21 A 956 TYR TYR SER LEU LEU MET PRO ILE LEU THR LEU THR ARG SEQRES 22 A 956 ALA LEU THR ALA GLU SER HIS VAL ASP THR ASP LEU THR SEQRES 23 A 956 LYS PRO TYR ILE LYS TRP ASP LEU LEU LYS TYR ASP PHE SEQRES 24 A 956 THR GLU GLU ARG LEU LYS LEU PHE ASP ARG TYR PHE LYS SEQRES 25 A 956 TYR TRP ASP GLN THR TYR HIS PRO ASN CYS VAL ASN CYS SEQRES 26 A 956 LEU ASP ASP ARG CYS ILE LEU HIS CYS ALA ASN PHE ASN SEQRES 27 A 956 VAL LEU PHE SER THR VAL PHE PRO PRO THR SER PHE GLY SEQRES 28 A 956 PRO LEU VAL ARG LYS ILE PHE VAL ASP GLY VAL PRO PHE SEQRES 29 A 956 VAL VAL SER THR GLY TYR HIS PHE ARG GLU LEU GLY VAL SEQRES 30 A 956 VAL HIS ASN GLN ASP VAL ASN LEU HIS SER SER ARG LEU SEQRES 31 A 956 SER PHE LYS GLU LEU LEU VAL TYR ALA ALA ASP PRO ALA SEQRES 32 A 956 MET HIS ALA ALA SER GLY ASN LEU LEU LEU ASP LYS ARG SEQRES 33 A 956 THR THR CYS PHE SER VAL ALA ALA LEU THR ASN ASN VAL SEQRES 34 A 956 ALA PHE GLN THR VAL LYS PRO GLY ASN PHE ASN LYS ASP SEQRES 35 A 956 PHE TYR ASP PHE ALA VAL SER LYS GLY PHE PHE LYS GLU SEQRES 36 A 956 GLY SER SER VAL GLU LEU LYS HIS PHE PHE PHE ALA GLN SEQRES 37 A 956 ASP GLY ASN ALA ALA ILE SER ASP TYR ASP TYR TYR ARG SEQRES 38 A 956 TYR ASN LEU PRO THR MET CYS ASP ILE ARG GLN LEU LEU SEQRES 39 A 956 PHE VAL VAL GLU VAL VAL ASP LYS TYR PHE ASP CYS TYR SEQRES 40 A 956 ASP GLY GLY CYS ILE ASN ALA ASN GLN VAL ILE VAL ASN SEQRES 41 A 956 ASN LEU ASP LYS SER ALA GLY PHE PRO PHE ASN LYS TRP SEQRES 42 A 956 GLY LYS ALA ARG LEU TYR TYR ASP SER MET SER TYR GLU SEQRES 43 A 956 ASP GLN ASP ALA LEU PHE ALA TYR THR LYS ARG ASN VAL SEQRES 44 A 956 ILE PRO THR ILE THR GLN MET ASN LEU LYS TYR ALA ILE SEQRES 45 A 956 SER ALA LYS ASN ARG ALA ARG THR VAL ALA GLY VAL SER SEQRES 46 A 956 ILE CYS SER THR MET THR ASN ARG GLN PHE HIS GLN LYS SEQRES 47 A 956 LEU LEU LYS SER ILE ALA ALA THR ARG GLY ALA THR VAL SEQRES 48 A 956 VAL ILE GLY THR SER LYS PHE TYR GLY GLY TRP HIS ASN SEQRES 49 A 956 MET LEU LYS THR VAL TYR SER ASP VAL GLU ASN PRO HIS SEQRES 50 A 956 LEU MET GLY TRP ASP TYR PRO LYS CYS ASP ARG ALA MET SEQRES 51 A 956 PRO ASN MET LEU ARG ILE MET ALA SER LEU VAL LEU ALA SEQRES 52 A 956 ARG LYS HIS THR THR CYS CYS SER LEU SER HIS ARG PHE SEQRES 53 A 956 TYR ARG LEU ALA ASN GLU CYS ALA GLN VAL LEU SER GLU SEQRES 54 A 956 MET VAL MET CYS GLY GLY SER LEU TYR VAL LYS PRO GLY SEQRES 55 A 956 GLY THR SER SER GLY ASP ALA THR THR ALA TYR ALA ASN SEQRES 56 A 956 SER VAL PHE ASN ILE CYS GLN ALA VAL THR ALA ASN VAL SEQRES 57 A 956 ASN ALA LEU LEU SER THR ASP GLY ASN LYS ILE ALA ASP SEQRES 58 A 956 LYS TYR VAL ARG ASN LEU GLN HIS ARG LEU TYR GLU CYS SEQRES 59 A 956 LEU TYR ARG ASN ARG ASP VAL ASP THR ASP PHE VAL ASN SEQRES 60 A 956 GLU PHE TYR ALA TYR LEU ARG LYS HIS PHE SER MET MET SEQRES 61 A 956 ILE LEU SER ASP ASP ALA VAL VAL CYS PHE ASN SER THR SEQRES 62 A 956 TYR ALA SER GLN GLY LEU VAL ALA SER ILE LYS ASN PHE SEQRES 63 A 956 LYS SER VAL LEU TYR TYR GLN ASN ASN VAL PHE MET SER SEQRES 64 A 956 GLU ALA LYS CYS TRP THR GLU THR ASP LEU THR LYS GLY SEQRES 65 A 956 PRO HIS GLU PHE CYS SER GLN HIS THR MET LEU VAL LYS SEQRES 66 A 956 GLN GLY ASP ASP TYR VAL TYR LEU PRO TYR PRO ASP PRO SEQRES 67 A 956 SER ARG ILE LEU GLY ALA GLY CYS PHE VAL ASP ASP ILE SEQRES 68 A 956 VAL LYS THR ASP GLY THR LEU MET ILE GLU ARG PHE VAL SEQRES 69 A 956 SER LEU ALA ILE ASP ALA TYR PRO LEU THR LYS HIS PRO SEQRES 70 A 956 ASN GLN GLU TYR ALA ASP VAL PHE HIS LEU TYR LEU GLN SEQRES 71 A 956 TYR ILE ARG LYS LEU HIS ASP GLU LEU THR GLY HIS MET SEQRES 72 A 956 LEU ASP MET TYR SER VAL MET LEU THR ASN ASP ASN THR SEQRES 73 A 956 SER ARG TYR TRP GLU PRO GLU PHE TYR GLU ALA MET TYR SEQRES 74 A 956 THR PRO HIS THR VAL LEU GLN SEQRES 1 B 220 MET HIS HIS HIS HIS HIS HIS ASP TYR LYS ASP ASP ASP SEQRES 2 B 220 ASP LYS GLU ASN LEU TYR PHE GLN GLY ALA ILE ALA SER SEQRES 3 B 220 GLU PHE SER SER LEU PRO SER TYR ALA ALA PHE ALA THR SEQRES 4 B 220 ALA GLN GLU ALA TYR GLU GLN ALA VAL ALA ASN GLY ASP SEQRES 5 B 220 SER GLU VAL VAL LEU LYS LYS LEU LYS LYS SER LEU ASN SEQRES 6 B 220 VAL ALA LYS SER GLU PHE ASP ARG ASP ALA ALA MET GLN SEQRES 7 B 220 ARG LYS LEU GLU LYS MET ALA ASP GLN ALA MET THR GLN SEQRES 8 B 220 MET TYR LYS GLN ALA ARG SER GLU ASP LYS ARG ALA LYS SEQRES 9 B 220 VAL THR SER ALA MET GLN THR MET LEU PHE THR MET LEU SEQRES 10 B 220 ARG LYS LEU ASP ASN ASP ALA LEU ASN ASN ILE ILE ASN SEQRES 11 B 220 ASN ALA ARG ASP GLY CYS VAL PRO LEU ASN ILE ILE PRO SEQRES 12 B 220 LEU THR THR ALA ALA LYS LEU MET VAL VAL ILE PRO ASP SEQRES 13 B 220 TYR ASN THR TYR LYS ASN THR CYS ASP GLY THR THR PHE SEQRES 14 B 220 THR TYR ALA SER ALA LEU TRP GLU ILE GLN GLN VAL VAL SEQRES 15 B 220 ASP ALA ASP SER LYS ILE VAL GLN LEU SER GLU ILE SER SEQRES 16 B 220 MET ASP ASN SER PRO ASN LEU ALA TRP PRO LEU ILE VAL SEQRES 17 B 220 THR ALA LEU ARG ALA ASN SER ALA VAL LYS LEU GLN SEQRES 1 C 110 MET SER LYS MET SER ASP VAL LYS CYS THR SER VAL VAL SEQRES 2 C 110 LEU LEU SER VAL LEU GLN GLN LEU ARG VAL GLU SER SER SEQRES 3 C 110 SER LYS LEU TRP ALA GLN CYS VAL GLN LEU HIS ASN ASP SEQRES 4 C 110 ILE LEU LEU ALA LYS ASP THR THR GLU ALA PHE GLU LYS SEQRES 5 C 110 MET VAL SER LEU LEU SER VAL LEU LEU SER MET GLN GLY SEQRES 6 C 110 ALA VAL ASP ILE ASN LYS LEU CYS GLU GLU MET LEU ASP SEQRES 7 C 110 ASN ARG ALA THR LEU GLN GLY GLY GLY GLY SER GLY LEU SEQRES 8 C 110 ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU TRP HIS GLU SEQRES 9 C 110 HIS HIS HIS HIS HIS HIS SEQRES 1 D 220 MET HIS HIS HIS HIS HIS HIS ASP TYR LYS ASP ASP ASP SEQRES 2 D 220 ASP LYS GLU ASN LEU TYR PHE GLN GLY ALA ILE ALA SER SEQRES 3 D 220 GLU PHE SER SER LEU PRO SER TYR ALA ALA PHE ALA THR SEQRES 4 D 220 ALA GLN GLU ALA TYR GLU GLN ALA VAL ALA ASN GLY ASP SEQRES 5 D 220 SER GLU VAL VAL LEU LYS LYS LEU LYS LYS SER LEU ASN SEQRES 6 D 220 VAL ALA LYS SER GLU PHE ASP ARG ASP ALA ALA MET GLN SEQRES 7 D 220 ARG LYS LEU GLU LYS MET ALA ASP GLN ALA MET THR GLN SEQRES 8 D 220 MET TYR LYS GLN ALA ARG SER GLU ASP LYS ARG ALA LYS SEQRES 9 D 220 VAL THR SER ALA MET GLN THR MET LEU PHE THR MET LEU SEQRES 10 D 220 ARG LYS LEU ASP ASN ASP ALA LEU ASN ASN ILE ILE ASN SEQRES 11 D 220 ASN ALA ARG ASP GLY CYS VAL PRO LEU ASN ILE ILE PRO SEQRES 12 D 220 LEU THR THR ALA ALA LYS LEU MET VAL VAL ILE PRO ASP SEQRES 13 D 220 TYR ASN THR TYR LYS ASN THR CYS ASP GLY THR THR PHE SEQRES 14 D 220 THR TYR ALA SER ALA LEU TRP GLU ILE GLN GLN VAL VAL SEQRES 15 D 220 ASP ALA ASP SER LYS ILE VAL GLN LEU SER GLU ILE SER SEQRES 16 D 220 MET ASP ASN SER PRO ASN LEU ALA TRP PRO LEU ILE VAL SEQRES 17 D 220 THR ALA LEU ARG ALA ASN SER ALA VAL LYS LEU GLN SEQRES 1 I 20 G C U A U G U G A G A U U SEQRES 2 I 20 A A G U U A U SEQRES 1 J 30 C C C C C C C C C C A U A SEQRES 2 J 30 A C U U A A U C U C A C A SEQRES 3 J 30 U A G C HET ZN A1001 1 HET ZN A1002 1 HET MG A1003 1 HET AT9 A1004 29 HET AT9 A1005 33 HET MG A1006 1 HET MG A1007 1 HET AT9 I 101 24 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM AT9 [[(2R,3R,4R,5R)-5-(2-AZANYL-6-OXIDANYLIDENE-1H-PURIN-9- HETNAM 2 AT9 YL)-4-FLUORANYL-4-METHYL-3-OXIDANYL-OXOLAN-2- HETNAM 3 AT9 YL]METHOXY-OXIDANYL-PHOSPHORYL] PHOSPHONO HYDROGEN HETNAM 4 AT9 PHOSPHATE HETSYN AT9 AT-9010 FORMUL 7 ZN 2(ZN 2+) FORMUL 9 MG 3(MG 2+) FORMUL 10 AT9 3(C11 H17 F N5 O13 P3) HELIX 1 AA1 ALA A 4 CYS A 12 1 9 HELIX 2 AA2 THR A 76 LEU A 90 1 15 HELIX 3 AA3 THR A 123 HIS A 133 1 11 HELIX 4 AA4 CYS A 139 THR A 148 1 10 HELIX 5 AA5 ASP A 155 LYS A 159 5 5 HELIX 6 AA6 ASN A 168 LEU A 172 5 5 HELIX 7 AA7 TYR A 175 ASN A 177 5 3 HELIX 8 AA8 LEU A 178 GLY A 200 1 23 HELIX 9 AA9 THR A 206 GLN A 210 5 5 HELIX 10 AB1 VAL A 234 THR A 248 1 15 HELIX 11 AB2 ARG A 249 HIS A 256 5 8 HELIX 12 AB3 PHE A 275 PHE A 287 1 13 HELIX 13 AB4 ASN A 297 CYS A 301 5 5 HELIX 14 AB5 ASP A 304 SER A 318 1 15 HELIX 15 AB6 PRO A 322 PHE A 326 5 5 HELIX 16 AB7 SER A 367 ASP A 377 1 11 HELIX 17 AB8 ASP A 377 SER A 384 1 8 HELIX 18 AB9 ASN A 416 LYS A 426 1 11 HELIX 19 AC1 ALA A 448 ASP A 454 1 7 HELIX 20 AC2 TYR A 455 ASN A 459 5 5 HELIX 21 AC3 ASP A 465 PHE A 480 1 16 HELIX 22 AC4 ASN A 489 VAL A 493 5 5 HELIX 23 AC5 PRO A 505 TRP A 509 5 5 HELIX 24 AC6 LYS A 511 MET A 519 1 9 HELIX 25 AC7 SER A 520 LYS A 532 1 13 HELIX 26 AC8 SER A 561 GLN A 573 1 13 HELIX 27 AC9 GLY A 596 SER A 607 1 12 HELIX 28 AD1 PRO A 627 ALA A 639 1 13 HELIX 29 AD2 SER A 647 LEU A 663 1 17 HELIX 30 AD3 THR A 686 CYS A 697 1 12 HELIX 31 AD4 ALA A 699 LEU A 708 1 10 HELIX 32 AD5 ASP A 711 ILE A 715 5 5 HELIX 33 AD6 ASP A 717 ARG A 733 1 17 HELIX 34 AD7 ASP A 738 GLU A 744 1 7 HELIX 35 AD8 PHE A 745 HIS A 752 1 8 HELIX 36 AD9 SER A 768 GLN A 773 1 6 HELIX 37 AE1 SER A 778 ASN A 790 1 13 HELIX 38 AE2 SER A 795 CYS A 799 5 5 HELIX 39 AE3 ASP A 833 CYS A 842 1 10 HELIX 40 AE4 ARG A 858 ALA A 866 1 9 HELIX 41 AE5 TYR A 867 HIS A 872 5 6 HELIX 42 AE6 ASN A 874 TYR A 903 1 30 HELIX 43 AE7 THR A 912 TRP A 916 5 5 HELIX 44 AE8 GLU A 917 ALA A 923 1 7 HELIX 45 AE9 LYS B 46 ARG B 51 1 6 HELIX 46 AF1 ALA B 54 MET B 94 1 41 HELIX 47 AF2 LEU B 95 ASP B 99 5 5 HELIX 48 AF3 LEU B 103 ASN B 108 1 6 HELIX 49 AF4 ILE B 119 ALA B 125 1 7 HELIX 50 AF5 ASP B 134 CYS B 142 1 9 HELIX 51 AF6 MET C 3 LYS C 7 1 5 HELIX 52 AF7 CYS C 8 LEU C 20 1 13 HELIX 53 AF8 SER C 25 LEU C 41 1 17 HELIX 54 AF9 ASP C 44 LEU C 56 1 13 HELIX 55 AG1 ILE C 68 CYS C 72 5 5 HELIX 56 AG2 GLU D 48 LYS D 82 1 35 HELIX 57 AG3 VAL D 83 ASP D 99 1 17 HELIX 58 AG4 ASP D 101 ASP D 112 1 12 HELIX 59 AG5 ASP D 134 THR D 141 1 8 SHEET 1 AA1 5 ARG A 18 PRO A 21 0 SHEET 2 AA1 5 PHE A 56 LYS A 59 -1 O GLN A 57 N THR A 20 SHEET 3 AA1 5 LEU A 65 ARG A 74 -1 O SER A 68 N GLU A 58 SHEET 4 AA1 5 MET A 110 LEU A 119 -1 O ILE A 114 N LYS A 73 SHEET 5 AA1 5 LYS A 98 ARG A 105 -1 N ASP A 100 O SER A 115 SHEET 1 AA2 2 VAL A 31 TYR A 38 0 SHEET 2 AA2 2 ALA A 43 LYS A 50 -1 O ALA A 46 N PHE A 35 SHEET 1 AA3 2 ILE A 201 VAL A 202 0 SHEET 2 AA3 2 ILE A 223 GLN A 224 -1 O ILE A 223 N VAL A 202 SHEET 1 AA4 4 VAL A 353 VAL A 354 0 SHEET 2 AA4 4 VAL A 342 HIS A 347 -1 N TYR A 346 O VAL A 354 SHEET 3 AA4 4 GLY A 327 ARG A 331 -1 N LEU A 329 O THR A 344 SHEET 4 AA4 4 VAL B 115 PRO B 116 -1 O VAL B 115 N VAL A 330 SHEET 1 AA5 3 VAL A 338 PRO A 339 0 SHEET 2 AA5 3 PHE A 334 VAL A 335 -1 N VAL A 335 O VAL A 338 SHEET 3 AA5 3 HIS A 362 SER A 363 1 O SER A 363 N PHE A 334 SHEET 1 AA610 THR A 556 GLY A 559 0 SHEET 2 AA610 ILE A 539 LEU A 544 -1 N GLN A 541 O GLY A 559 SHEET 3 AA610 MET A 666 CYS A 669 1 O MET A 668 N THR A 540 SHEET 4 AA610 SER A 672 TYR A 674 -1 O TYR A 674 N VAL A 667 SHEET 5 AA610 SER A 397 ALA A 400 -1 N ALA A 399 O LEU A 673 SHEET 6 AA610 ASN A 386 ASP A 390 -1 N ASN A 386 O ALA A 400 SHEET 7 AA610 LYS B 127 ILE B 132 1 O MET B 129 N LEU A 389 SHEET 8 AA610 LEU B 184 ARG B 190 -1 O VAL B 186 N VAL B 130 SHEET 9 AA610 TRP B 154 VAL B 160 -1 N VAL B 160 O ILE B 185 SHEET 10 AA610 THR B 146 PHE B 147 -1 N PHE B 147 O TRP B 154 SHEET 1 AA7 2 ASN A 414 PHE A 415 0 SHEET 2 AA7 2 PHE A 843 VAL A 844 -1 O VAL A 844 N ASN A 414 SHEET 1 AA8 4 PHE A 753 MET A 755 0 SHEET 2 AA8 4 ALA A 762 ASN A 767 -1 O CYS A 765 N SER A 754 SHEET 3 AA8 4 PRO A 612 TRP A 617 -1 N MET A 615 O VAL A 764 SHEET 4 AA8 4 TRP A 800 GLU A 802 -1 O GLU A 802 N LEU A 614 SHEET 1 AA9 2 HIS A 816 GLN A 822 0 SHEET 2 AA9 2 ASP A 825 TYR A 831 -1 O TYR A 831 N HIS A 816 SHEET 1 AB1 3 LYS D 127 VAL D 130 0 SHEET 2 AB1 3 VAL D 186 ARG D 190 -1 O ALA D 188 N LEU D 128 SHEET 3 AB1 3 TRP D 154 VAL D 159 -1 N GLU D 155 O LEU D 189 LINK O3' U I 32 PA AT9 I 101 1555 1555 1.59 LINK OD1 ASN A 209 MG MG A1003 1555 1555 2.09 LINK OD2 ASP A 218 MG MG A1003 1555 1555 2.70 LINK OD1 ASP A 218 MG MG A1007 1555 1555 2.21 LINK OD2 ASP A 218 MG MG A1007 1555 1555 2.35 LINK ND1 HIS A 295 ZN ZN A1001 1555 1555 2.09 LINK SG CYS A 301 ZN ZN A1001 1555 1555 2.33 LINK SG CYS A 306 ZN ZN A1001 1555 1555 2.36 LINK SG CYS A 310 ZN ZN A1001 1555 1555 2.34 LINK SG CYS A 487 ZN ZN A1002 1555 1555 2.32 LINK O ASP A 618 MG MG A1006 1555 1555 2.62 LINK OD2 ASP A 618 MG MG A1006 1555 1555 2.83 LINK ND1 HIS A 642 ZN ZN A1002 1555 1555 2.07 LINK SG CYS A 645 ZN ZN A1002 1555 1555 2.32 LINK SG CYS A 646 ZN ZN A1002 1555 1555 2.32 LINK MG MG A1003 O3A AT9 A1004 1555 1555 2.37 LINK O3B AT9 A1004 MG MG A1007 1555 1555 2.31 LINK O3A AT9 A1005 MG MG A1006 1555 1555 2.48 LINK O3B AT9 A1005 MG MG A1006 1555 1555 2.98 CISPEP 1 PHE A 504 PRO A 505 0 -0.29 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000