data_7EK2 # _entry.id 7EK2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7EK2 pdb_00007ek2 10.2210/pdb7ek2/pdb WWPDB D_1300021570 ? ? EMDB EMD-31166 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-04-06 2 'Structure model' 1 1 2022-05-18 3 'Structure model' 1 2 2024-06-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7EK2 _pdbx_database_status.recvd_initial_deposition_date 2021-04-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of VCCN1 in lipid nanodisc' _pdbx_database_related.db_id EMD-31166 _pdbx_database_related.content_type 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hagino, T.' 1 ? 'Kato, T.' 2 ? 'Kasuya, G.' 3 ? 'Kobayashi, K.' 4 ? 'Kusakizako, T.' 5 ? 'Yamashita, K.' 6 ? 'Nishizawa, T.' 7 ? 'Nureki, O.' 8 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 2505 _citation.page_last 2505 _citation.title 'Cryo-EM structures of thylakoid-located voltage-dependent chloride channel VCCN1.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-022-30292-w _citation.pdbx_database_id_PubMed 35523970 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hagino, T.' 1 ? primary 'Kato, T.' 2 ? primary 'Kasuya, G.' 3 0000-0003-1756-5764 primary 'Kobayashi, K.' 4 ? primary 'Kusakizako, T.' 5 0000-0002-6186-6647 primary 'Hamamoto, S.' 6 ? primary 'Sobajima, T.' 7 0000-0002-0753-5361 primary 'Fujiwara, Y.' 8 ? primary 'Yamashita, K.' 9 0000-0002-5442-7582 primary 'Kawasaki, H.' 10 ? primary 'Maturana, A.D.' 11 ? primary 'Nishizawa, T.' 12 0000-0001-7463-8398 primary 'Nureki, O.' 13 0000-0003-1813-7008 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Bestrophin-like protein' _entity.formula_weight 42057.738 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation A207S _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MPNPSPPSSSSPVQTLISILRIIPDWSDRTQERGMRQHRTLYDHEKWMHHRSSYRHLRHLLSSLSSRVILSLIPPVIAFT LVAVVIASYNTAVALDLLPGIFPLLRSSSLPYQLTAPALALLLVFRTEASYSRFEEGRKSWTEVIAGANDFARQIISSVE TSGDAQLKKALLQYIVAFPVALKCHVIYGSDIARDLQNLLEVDDLLVVLNSKHRPGCIIQFISRSLQLLKLEESRRIMLQ SKISCFHEGIGICEQLIGTPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEQVGVLIEEPFPML ALDDLCNSVRNNVQEALASEKLIRARLAAKGRIQSEQQFQNGQPRPENLYFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MPNPSPPSSSSPVQTLISILRIIPDWSDRTQERGMRQHRTLYDHEKWMHHRSSYRHLRHLLSSLSSRVILSLIPPVIAFT LVAVVIASYNTAVALDLLPGIFPLLRSSSLPYQLTAPALALLLVFRTEASYSRFEEGRKSWTEVIAGANDFARQIISSVE TSGDAQLKKALLQYIVAFPVALKCHVIYGSDIARDLQNLLEVDDLLVVLNSKHRPGCIIQFISRSLQLLKLEESRRIMLQ SKISCFHEGIGICEQLIGTPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEQVGVLIEEPFPML ALDDLCNSVRNNVQEALASEKLIRARLAAKGRIQSEQQFQNGQPRPENLYFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 ASN n 1 4 PRO n 1 5 SER n 1 6 PRO n 1 7 PRO n 1 8 SER n 1 9 SER n 1 10 SER n 1 11 SER n 1 12 PRO n 1 13 VAL n 1 14 GLN n 1 15 THR n 1 16 LEU n 1 17 ILE n 1 18 SER n 1 19 ILE n 1 20 LEU n 1 21 ARG n 1 22 ILE n 1 23 ILE n 1 24 PRO n 1 25 ASP n 1 26 TRP n 1 27 SER n 1 28 ASP n 1 29 ARG n 1 30 THR n 1 31 GLN n 1 32 GLU n 1 33 ARG n 1 34 GLY n 1 35 MET n 1 36 ARG n 1 37 GLN n 1 38 HIS n 1 39 ARG n 1 40 THR n 1 41 LEU n 1 42 TYR n 1 43 ASP n 1 44 HIS n 1 45 GLU n 1 46 LYS n 1 47 TRP n 1 48 MET n 1 49 HIS n 1 50 HIS n 1 51 ARG n 1 52 SER n 1 53 SER n 1 54 TYR n 1 55 ARG n 1 56 HIS n 1 57 LEU n 1 58 ARG n 1 59 HIS n 1 60 LEU n 1 61 LEU n 1 62 SER n 1 63 SER n 1 64 LEU n 1 65 SER n 1 66 SER n 1 67 ARG n 1 68 VAL n 1 69 ILE n 1 70 LEU n 1 71 SER n 1 72 LEU n 1 73 ILE n 1 74 PRO n 1 75 PRO n 1 76 VAL n 1 77 ILE n 1 78 ALA n 1 79 PHE n 1 80 THR n 1 81 LEU n 1 82 VAL n 1 83 ALA n 1 84 VAL n 1 85 VAL n 1 86 ILE n 1 87 ALA n 1 88 SER n 1 89 TYR n 1 90 ASN n 1 91 THR n 1 92 ALA n 1 93 VAL n 1 94 ALA n 1 95 LEU n 1 96 ASP n 1 97 LEU n 1 98 LEU n 1 99 PRO n 1 100 GLY n 1 101 ILE n 1 102 PHE n 1 103 PRO n 1 104 LEU n 1 105 LEU n 1 106 ARG n 1 107 SER n 1 108 SER n 1 109 SER n 1 110 LEU n 1 111 PRO n 1 112 TYR n 1 113 GLN n 1 114 LEU n 1 115 THR n 1 116 ALA n 1 117 PRO n 1 118 ALA n 1 119 LEU n 1 120 ALA n 1 121 LEU n 1 122 LEU n 1 123 LEU n 1 124 VAL n 1 125 PHE n 1 126 ARG n 1 127 THR n 1 128 GLU n 1 129 ALA n 1 130 SER n 1 131 TYR n 1 132 SER n 1 133 ARG n 1 134 PHE n 1 135 GLU n 1 136 GLU n 1 137 GLY n 1 138 ARG n 1 139 LYS n 1 140 SER n 1 141 TRP n 1 142 THR n 1 143 GLU n 1 144 VAL n 1 145 ILE n 1 146 ALA n 1 147 GLY n 1 148 ALA n 1 149 ASN n 1 150 ASP n 1 151 PHE n 1 152 ALA n 1 153 ARG n 1 154 GLN n 1 155 ILE n 1 156 ILE n 1 157 SER n 1 158 SER n 1 159 VAL n 1 160 GLU n 1 161 THR n 1 162 SER n 1 163 GLY n 1 164 ASP n 1 165 ALA n 1 166 GLN n 1 167 LEU n 1 168 LYS n 1 169 LYS n 1 170 ALA n 1 171 LEU n 1 172 LEU n 1 173 GLN n 1 174 TYR n 1 175 ILE n 1 176 VAL n 1 177 ALA n 1 178 PHE n 1 179 PRO n 1 180 VAL n 1 181 ALA n 1 182 LEU n 1 183 LYS n 1 184 CYS n 1 185 HIS n 1 186 VAL n 1 187 ILE n 1 188 TYR n 1 189 GLY n 1 190 SER n 1 191 ASP n 1 192 ILE n 1 193 ALA n 1 194 ARG n 1 195 ASP n 1 196 LEU n 1 197 GLN n 1 198 ASN n 1 199 LEU n 1 200 LEU n 1 201 GLU n 1 202 VAL n 1 203 ASP n 1 204 ASP n 1 205 LEU n 1 206 LEU n 1 207 VAL n 1 208 VAL n 1 209 LEU n 1 210 ASN n 1 211 SER n 1 212 LYS n 1 213 HIS n 1 214 ARG n 1 215 PRO n 1 216 GLY n 1 217 CYS n 1 218 ILE n 1 219 ILE n 1 220 GLN n 1 221 PHE n 1 222 ILE n 1 223 SER n 1 224 ARG n 1 225 SER n 1 226 LEU n 1 227 GLN n 1 228 LEU n 1 229 LEU n 1 230 LYS n 1 231 LEU n 1 232 GLU n 1 233 GLU n 1 234 SER n 1 235 ARG n 1 236 ARG n 1 237 ILE n 1 238 MET n 1 239 LEU n 1 240 GLN n 1 241 SER n 1 242 LYS n 1 243 ILE n 1 244 SER n 1 245 CYS n 1 246 PHE n 1 247 HIS n 1 248 GLU n 1 249 GLY n 1 250 ILE n 1 251 GLY n 1 252 ILE n 1 253 CYS n 1 254 GLU n 1 255 GLN n 1 256 LEU n 1 257 ILE n 1 258 GLY n 1 259 THR n 1 260 PRO n 1 261 ILE n 1 262 PRO n 1 263 LEU n 1 264 SER n 1 265 TYR n 1 266 THR n 1 267 ARG n 1 268 LEU n 1 269 THR n 1 270 SER n 1 271 ARG n 1 272 PHE n 1 273 LEU n 1 274 VAL n 1 275 LEU n 1 276 TRP n 1 277 HIS n 1 278 LEU n 1 279 THR n 1 280 LEU n 1 281 PRO n 1 282 ILE n 1 283 ILE n 1 284 LEU n 1 285 TRP n 1 286 ASP n 1 287 ASP n 1 288 CYS n 1 289 HIS n 1 290 TRP n 1 291 ILE n 1 292 VAL n 1 293 VAL n 1 294 PRO n 1 295 ALA n 1 296 THR n 1 297 PHE n 1 298 ILE n 1 299 SER n 1 300 ALA n 1 301 ALA n 1 302 SER n 1 303 LEU n 1 304 PHE n 1 305 CYS n 1 306 ILE n 1 307 GLU n 1 308 GLN n 1 309 VAL n 1 310 GLY n 1 311 VAL n 1 312 LEU n 1 313 ILE n 1 314 GLU n 1 315 GLU n 1 316 PRO n 1 317 PHE n 1 318 PRO n 1 319 MET n 1 320 LEU n 1 321 ALA n 1 322 LEU n 1 323 ASP n 1 324 ASP n 1 325 LEU n 1 326 CYS n 1 327 ASN n 1 328 SER n 1 329 VAL n 1 330 ARG n 1 331 ASN n 1 332 ASN n 1 333 VAL n 1 334 GLN n 1 335 GLU n 1 336 ALA n 1 337 LEU n 1 338 ALA n 1 339 SER n 1 340 GLU n 1 341 LYS n 1 342 LEU n 1 343 ILE n 1 344 ARG n 1 345 ALA n 1 346 ARG n 1 347 LEU n 1 348 ALA n 1 349 ALA n 1 350 LYS n 1 351 GLY n 1 352 ARG n 1 353 ILE n 1 354 GLN n 1 355 SER n 1 356 GLU n 1 357 GLN n 1 358 GLN n 1 359 PHE n 1 360 GLN n 1 361 ASN n 1 362 GLY n 1 363 GLN n 1 364 PRO n 1 365 ARG n 1 366 PRO n 1 367 GLU n 1 368 ASN n 1 369 LEU n 1 370 TYR n 1 371 PHE n 1 372 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 372 _entity_src_gen.gene_src_common_name 'Apple, Pyrus malus' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DVH24_014265 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Malus domestica' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3750 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 68 ? ? ? A . n A 1 2 PRO 2 69 ? ? ? A . n A 1 3 ASN 3 70 ? ? ? A . n A 1 4 PRO 4 71 ? ? ? A . n A 1 5 SER 5 72 ? ? ? A . n A 1 6 PRO 6 73 ? ? ? A . n A 1 7 PRO 7 74 ? ? ? A . n A 1 8 SER 8 75 ? ? ? A . n A 1 9 SER 9 76 ? ? ? A . n A 1 10 SER 10 77 ? ? ? A . n A 1 11 SER 11 78 78 SER SER A . n A 1 12 PRO 12 79 79 PRO PRO A . n A 1 13 VAL 13 80 80 VAL VAL A . n A 1 14 GLN 14 81 81 GLN GLN A . n A 1 15 THR 15 82 82 THR THR A . n A 1 16 LEU 16 83 83 LEU LEU A . n A 1 17 ILE 17 84 84 ILE ILE A . n A 1 18 SER 18 85 85 SER SER A . n A 1 19 ILE 19 86 86 ILE ILE A . n A 1 20 LEU 20 87 87 LEU LEU A . n A 1 21 ARG 21 88 88 ARG ARG A . n A 1 22 ILE 22 89 89 ILE ILE A . n A 1 23 ILE 23 90 90 ILE ILE A . n A 1 24 PRO 24 91 91 PRO PRO A . n A 1 25 ASP 25 92 92 ASP ASP A . n A 1 26 TRP 26 93 93 TRP TRP A . n A 1 27 SER 27 94 94 SER SER A . n A 1 28 ASP 28 95 95 ASP ASP A . n A 1 29 ARG 29 96 96 ARG ARG A . n A 1 30 THR 30 97 97 THR THR A . n A 1 31 GLN 31 98 98 GLN GLN A . n A 1 32 GLU 32 99 99 GLU GLU A . n A 1 33 ARG 33 100 100 ARG ARG A . n A 1 34 GLY 34 101 101 GLY GLY A . n A 1 35 MET 35 102 102 MET MET A . n A 1 36 ARG 36 103 103 ARG ARG A . n A 1 37 GLN 37 104 104 GLN GLN A . n A 1 38 HIS 38 105 105 HIS HIS A . n A 1 39 ARG 39 106 106 ARG ARG A . n A 1 40 THR 40 107 107 THR THR A . n A 1 41 LEU 41 108 108 LEU LEU A . n A 1 42 TYR 42 109 109 TYR TYR A . n A 1 43 ASP 43 110 110 ASP ASP A . n A 1 44 HIS 44 111 111 HIS HIS A . n A 1 45 GLU 45 112 112 GLU GLU A . n A 1 46 LYS 46 113 113 LYS LYS A . n A 1 47 TRP 47 114 114 TRP TRP A . n A 1 48 MET 48 115 115 MET MET A . n A 1 49 HIS 49 116 116 HIS HIS A . n A 1 50 HIS 50 117 117 HIS HIS A . n A 1 51 ARG 51 118 118 ARG ARG A . n A 1 52 SER 52 119 119 SER SER A . n A 1 53 SER 53 120 120 SER SER A . n A 1 54 TYR 54 121 121 TYR TYR A . n A 1 55 ARG 55 122 122 ARG ARG A . n A 1 56 HIS 56 123 123 HIS HIS A . n A 1 57 LEU 57 124 124 LEU LEU A . n A 1 58 ARG 58 125 125 ARG ARG A . n A 1 59 HIS 59 126 126 HIS HIS A . n A 1 60 LEU 60 127 127 LEU LEU A . n A 1 61 LEU 61 128 128 LEU LEU A . n A 1 62 SER 62 129 129 SER SER A . n A 1 63 SER 63 130 130 SER SER A . n A 1 64 LEU 64 131 131 LEU LEU A . n A 1 65 SER 65 132 132 SER SER A . n A 1 66 SER 66 133 133 SER SER A . n A 1 67 ARG 67 134 134 ARG ARG A . n A 1 68 VAL 68 135 135 VAL VAL A . n A 1 69 ILE 69 136 136 ILE ILE A . n A 1 70 LEU 70 137 137 LEU LEU A . n A 1 71 SER 71 138 138 SER SER A . n A 1 72 LEU 72 139 139 LEU LEU A . n A 1 73 ILE 73 140 140 ILE ILE A . n A 1 74 PRO 74 141 141 PRO PRO A . n A 1 75 PRO 75 142 142 PRO PRO A . n A 1 76 VAL 76 143 143 VAL VAL A . n A 1 77 ILE 77 144 144 ILE ILE A . n A 1 78 ALA 78 145 145 ALA ALA A . n A 1 79 PHE 79 146 146 PHE PHE A . n A 1 80 THR 80 147 147 THR THR A . n A 1 81 LEU 81 148 148 LEU LEU A . n A 1 82 VAL 82 149 149 VAL VAL A . n A 1 83 ALA 83 150 150 ALA ALA A . n A 1 84 VAL 84 151 151 VAL VAL A . n A 1 85 VAL 85 152 152 VAL VAL A . n A 1 86 ILE 86 153 153 ILE ILE A . n A 1 87 ALA 87 154 154 ALA ALA A . n A 1 88 SER 88 155 155 SER SER A . n A 1 89 TYR 89 156 156 TYR TYR A . n A 1 90 ASN 90 157 157 ASN ASN A . n A 1 91 THR 91 158 158 THR THR A . n A 1 92 ALA 92 159 159 ALA ALA A . n A 1 93 VAL 93 160 160 VAL VAL A . n A 1 94 ALA 94 161 161 ALA ALA A . n A 1 95 LEU 95 162 162 LEU LEU A . n A 1 96 ASP 96 163 163 ASP ASP A . n A 1 97 LEU 97 164 164 LEU LEU A . n A 1 98 LEU 98 165 165 LEU LEU A . n A 1 99 PRO 99 166 166 PRO PRO A . n A 1 100 GLY 100 167 167 GLY GLY A . n A 1 101 ILE 101 168 168 ILE ILE A . n A 1 102 PHE 102 169 169 PHE PHE A . n A 1 103 PRO 103 170 170 PRO PRO A . n A 1 104 LEU 104 171 171 LEU LEU A . n A 1 105 LEU 105 172 172 LEU LEU A . n A 1 106 ARG 106 173 173 ARG ARG A . n A 1 107 SER 107 174 174 SER SER A . n A 1 108 SER 108 175 175 SER SER A . n A 1 109 SER 109 176 176 SER SER A . n A 1 110 LEU 110 177 177 LEU LEU A . n A 1 111 PRO 111 178 178 PRO PRO A . n A 1 112 TYR 112 179 179 TYR TYR A . n A 1 113 GLN 113 180 180 GLN GLN A . n A 1 114 LEU 114 181 181 LEU LEU A . n A 1 115 THR 115 182 182 THR THR A . n A 1 116 ALA 116 183 183 ALA ALA A . n A 1 117 PRO 117 184 184 PRO PRO A . n A 1 118 ALA 118 185 185 ALA ALA A . n A 1 119 LEU 119 186 186 LEU LEU A . n A 1 120 ALA 120 187 187 ALA ALA A . n A 1 121 LEU 121 188 188 LEU LEU A . n A 1 122 LEU 122 189 189 LEU LEU A . n A 1 123 LEU 123 190 190 LEU LEU A . n A 1 124 VAL 124 191 191 VAL VAL A . n A 1 125 PHE 125 192 192 PHE PHE A . n A 1 126 ARG 126 193 193 ARG ARG A . n A 1 127 THR 127 194 194 THR THR A . n A 1 128 GLU 128 195 195 GLU GLU A . n A 1 129 ALA 129 196 196 ALA ALA A . n A 1 130 SER 130 197 197 SER SER A . n A 1 131 TYR 131 198 198 TYR TYR A . n A 1 132 SER 132 199 199 SER SER A . n A 1 133 ARG 133 200 200 ARG ARG A . n A 1 134 PHE 134 201 201 PHE PHE A . n A 1 135 GLU 135 202 202 GLU GLU A . n A 1 136 GLU 136 203 203 GLU GLU A . n A 1 137 GLY 137 204 204 GLY GLY A . n A 1 138 ARG 138 205 205 ARG ARG A . n A 1 139 LYS 139 206 206 LYS LYS A . n A 1 140 SER 140 207 207 SER SER A . n A 1 141 TRP 141 208 208 TRP TRP A . n A 1 142 THR 142 209 209 THR THR A . n A 1 143 GLU 143 210 210 GLU GLU A . n A 1 144 VAL 144 211 211 VAL VAL A . n A 1 145 ILE 145 212 212 ILE ILE A . n A 1 146 ALA 146 213 213 ALA ALA A . n A 1 147 GLY 147 214 214 GLY GLY A . n A 1 148 ALA 148 215 215 ALA ALA A . n A 1 149 ASN 149 216 216 ASN ASN A . n A 1 150 ASP 150 217 217 ASP ASP A . n A 1 151 PHE 151 218 218 PHE PHE A . n A 1 152 ALA 152 219 219 ALA ALA A . n A 1 153 ARG 153 220 220 ARG ARG A . n A 1 154 GLN 154 221 221 GLN GLN A . n A 1 155 ILE 155 222 222 ILE ILE A . n A 1 156 ILE 156 223 223 ILE ILE A . n A 1 157 SER 157 224 224 SER SER A . n A 1 158 SER 158 225 225 SER SER A . n A 1 159 VAL 159 226 226 VAL VAL A . n A 1 160 GLU 160 227 227 GLU GLU A . n A 1 161 THR 161 228 228 THR THR A . n A 1 162 SER 162 229 229 SER SER A . n A 1 163 GLY 163 230 230 GLY GLY A . n A 1 164 ASP 164 231 231 ASP ASP A . n A 1 165 ALA 165 232 232 ALA ALA A . n A 1 166 GLN 166 233 233 GLN GLN A . n A 1 167 LEU 167 234 234 LEU LEU A . n A 1 168 LYS 168 235 235 LYS LYS A . n A 1 169 LYS 169 236 236 LYS LYS A . n A 1 170 ALA 170 237 237 ALA ALA A . n A 1 171 LEU 171 238 238 LEU LEU A . n A 1 172 LEU 172 239 239 LEU LEU A . n A 1 173 GLN 173 240 240 GLN GLN A . n A 1 174 TYR 174 241 241 TYR TYR A . n A 1 175 ILE 175 242 242 ILE ILE A . n A 1 176 VAL 176 243 243 VAL VAL A . n A 1 177 ALA 177 244 244 ALA ALA A . n A 1 178 PHE 178 245 245 PHE PHE A . n A 1 179 PRO 179 246 246 PRO PRO A . n A 1 180 VAL 180 247 247 VAL VAL A . n A 1 181 ALA 181 248 248 ALA ALA A . n A 1 182 LEU 182 249 249 LEU LEU A . n A 1 183 LYS 183 250 250 LYS LYS A . n A 1 184 CYS 184 251 251 CYS CYS A . n A 1 185 HIS 185 252 252 HIS HIS A . n A 1 186 VAL 186 253 253 VAL VAL A . n A 1 187 ILE 187 254 254 ILE ILE A . n A 1 188 TYR 188 255 255 TYR TYR A . n A 1 189 GLY 189 256 256 GLY GLY A . n A 1 190 SER 190 257 257 SER SER A . n A 1 191 ASP 191 258 258 ASP ASP A . n A 1 192 ILE 192 259 259 ILE ILE A . n A 1 193 ALA 193 260 260 ALA ALA A . n A 1 194 ARG 194 261 261 ARG ARG A . n A 1 195 ASP 195 262 262 ASP ASP A . n A 1 196 LEU 196 263 263 LEU LEU A . n A 1 197 GLN 197 264 264 GLN GLN A . n A 1 198 ASN 198 265 265 ASN ASN A . n A 1 199 LEU 199 266 266 LEU LEU A . n A 1 200 LEU 200 267 267 LEU LEU A . n A 1 201 GLU 201 268 268 GLU GLU A . n A 1 202 VAL 202 269 269 VAL VAL A . n A 1 203 ASP 203 270 270 ASP ASP A . n A 1 204 ASP 204 271 271 ASP ASP A . n A 1 205 LEU 205 272 272 LEU LEU A . n A 1 206 LEU 206 273 273 LEU LEU A . n A 1 207 VAL 207 274 274 VAL VAL A . n A 1 208 VAL 208 275 275 VAL VAL A . n A 1 209 LEU 209 276 276 LEU LEU A . n A 1 210 ASN 210 277 277 ASN ASN A . n A 1 211 SER 211 278 278 SER SER A . n A 1 212 LYS 212 279 279 LYS LYS A . n A 1 213 HIS 213 280 280 HIS HIS A . n A 1 214 ARG 214 281 281 ARG ARG A . n A 1 215 PRO 215 282 282 PRO PRO A . n A 1 216 GLY 216 283 283 GLY GLY A . n A 1 217 CYS 217 284 284 CYS CYS A . n A 1 218 ILE 218 285 285 ILE ILE A . n A 1 219 ILE 219 286 286 ILE ILE A . n A 1 220 GLN 220 287 287 GLN GLN A . n A 1 221 PHE 221 288 288 PHE PHE A . n A 1 222 ILE 222 289 289 ILE ILE A . n A 1 223 SER 223 290 290 SER SER A . n A 1 224 ARG 224 291 291 ARG ARG A . n A 1 225 SER 225 292 292 SER SER A . n A 1 226 LEU 226 293 293 LEU LEU A . n A 1 227 GLN 227 294 294 GLN GLN A . n A 1 228 LEU 228 295 295 LEU LEU A . n A 1 229 LEU 229 296 296 LEU LEU A . n A 1 230 LYS 230 297 297 LYS LYS A . n A 1 231 LEU 231 298 298 LEU LEU A . n A 1 232 GLU 232 299 299 GLU GLU A . n A 1 233 GLU 233 300 300 GLU GLU A . n A 1 234 SER 234 301 301 SER SER A . n A 1 235 ARG 235 302 302 ARG ARG A . n A 1 236 ARG 236 303 303 ARG ARG A . n A 1 237 ILE 237 304 304 ILE ILE A . n A 1 238 MET 238 305 305 MET MET A . n A 1 239 LEU 239 306 306 LEU LEU A . n A 1 240 GLN 240 307 307 GLN GLN A . n A 1 241 SER 241 308 308 SER SER A . n A 1 242 LYS 242 309 309 LYS LYS A . n A 1 243 ILE 243 310 310 ILE ILE A . n A 1 244 SER 244 311 311 SER SER A . n A 1 245 CYS 245 312 312 CYS CYS A . n A 1 246 PHE 246 313 313 PHE PHE A . n A 1 247 HIS 247 314 314 HIS HIS A . n A 1 248 GLU 248 315 315 GLU GLU A . n A 1 249 GLY 249 316 316 GLY GLY A . n A 1 250 ILE 250 317 317 ILE ILE A . n A 1 251 GLY 251 318 318 GLY GLY A . n A 1 252 ILE 252 319 319 ILE ILE A . n A 1 253 CYS 253 320 320 CYS CYS A . n A 1 254 GLU 254 321 321 GLU GLU A . n A 1 255 GLN 255 322 322 GLN GLN A . n A 1 256 LEU 256 323 323 LEU LEU A . n A 1 257 ILE 257 324 324 ILE ILE A . n A 1 258 GLY 258 325 325 GLY GLY A . n A 1 259 THR 259 326 326 THR THR A . n A 1 260 PRO 260 327 327 PRO PRO A . n A 1 261 ILE 261 328 328 ILE ILE A . n A 1 262 PRO 262 329 329 PRO PRO A . n A 1 263 LEU 263 330 330 LEU LEU A . n A 1 264 SER 264 331 331 SER SER A . n A 1 265 TYR 265 332 332 TYR TYR A . n A 1 266 THR 266 333 333 THR THR A . n A 1 267 ARG 267 334 334 ARG ARG A . n A 1 268 LEU 268 335 335 LEU LEU A . n A 1 269 THR 269 336 336 THR THR A . n A 1 270 SER 270 337 337 SER SER A . n A 1 271 ARG 271 338 338 ARG ARG A . n A 1 272 PHE 272 339 339 PHE PHE A . n A 1 273 LEU 273 340 340 LEU LEU A . n A 1 274 VAL 274 341 341 VAL VAL A . n A 1 275 LEU 275 342 342 LEU LEU A . n A 1 276 TRP 276 343 343 TRP TRP A . n A 1 277 HIS 277 344 344 HIS HIS A . n A 1 278 LEU 278 345 345 LEU LEU A . n A 1 279 THR 279 346 346 THR THR A . n A 1 280 LEU 280 347 347 LEU LEU A . n A 1 281 PRO 281 348 348 PRO PRO A . n A 1 282 ILE 282 349 349 ILE ILE A . n A 1 283 ILE 283 350 350 ILE ILE A . n A 1 284 LEU 284 351 351 LEU LEU A . n A 1 285 TRP 285 352 352 TRP TRP A . n A 1 286 ASP 286 353 353 ASP ASP A . n A 1 287 ASP 287 354 354 ASP ASP A . n A 1 288 CYS 288 355 355 CYS CYS A . n A 1 289 HIS 289 356 356 HIS HIS A . n A 1 290 TRP 290 357 357 TRP TRP A . n A 1 291 ILE 291 358 358 ILE ILE A . n A 1 292 VAL 292 359 359 VAL VAL A . n A 1 293 VAL 293 360 360 VAL VAL A . n A 1 294 PRO 294 361 361 PRO PRO A . n A 1 295 ALA 295 362 362 ALA ALA A . n A 1 296 THR 296 363 363 THR THR A . n A 1 297 PHE 297 364 364 PHE PHE A . n A 1 298 ILE 298 365 365 ILE ILE A . n A 1 299 SER 299 366 366 SER SER A . n A 1 300 ALA 300 367 367 ALA ALA A . n A 1 301 ALA 301 368 368 ALA ALA A . n A 1 302 SER 302 369 369 SER SER A . n A 1 303 LEU 303 370 370 LEU LEU A . n A 1 304 PHE 304 371 371 PHE PHE A . n A 1 305 CYS 305 372 372 CYS CYS A . n A 1 306 ILE 306 373 373 ILE ILE A . n A 1 307 GLU 307 374 374 GLU GLU A . n A 1 308 GLN 308 375 375 GLN GLN A . n A 1 309 VAL 309 376 376 VAL VAL A . n A 1 310 GLY 310 377 377 GLY GLY A . n A 1 311 VAL 311 378 378 VAL VAL A . n A 1 312 LEU 312 379 379 LEU LEU A . n A 1 313 ILE 313 380 380 ILE ILE A . n A 1 314 GLU 314 381 381 GLU GLU A . n A 1 315 GLU 315 382 382 GLU GLU A . n A 1 316 PRO 316 383 383 PRO PRO A . n A 1 317 PHE 317 384 384 PHE PHE A . n A 1 318 PRO 318 385 385 PRO PRO A . n A 1 319 MET 319 386 386 MET MET A . n A 1 320 LEU 320 387 387 LEU LEU A . n A 1 321 ALA 321 388 388 ALA ALA A . n A 1 322 LEU 322 389 389 LEU LEU A . n A 1 323 ASP 323 390 390 ASP ASP A . n A 1 324 ASP 324 391 391 ASP ASP A . n A 1 325 LEU 325 392 392 LEU LEU A . n A 1 326 CYS 326 393 393 CYS CYS A . n A 1 327 ASN 327 394 394 ASN ASN A . n A 1 328 SER 328 395 395 SER SER A . n A 1 329 VAL 329 396 396 VAL VAL A . n A 1 330 ARG 330 397 397 ARG ARG A . n A 1 331 ASN 331 398 398 ASN ASN A . n A 1 332 ASN 332 399 399 ASN ASN A . n A 1 333 VAL 333 400 400 VAL VAL A . n A 1 334 GLN 334 401 401 GLN GLN A . n A 1 335 GLU 335 402 402 GLU GLU A . n A 1 336 ALA 336 403 403 ALA ALA A . n A 1 337 LEU 337 404 404 LEU LEU A . n A 1 338 ALA 338 405 405 ALA ALA A . n A 1 339 SER 339 406 406 SER SER A . n A 1 340 GLU 340 407 407 GLU GLU A . n A 1 341 LYS 341 408 408 LYS LYS A . n A 1 342 LEU 342 409 409 LEU LEU A . n A 1 343 ILE 343 410 410 ILE ILE A . n A 1 344 ARG 344 411 411 ARG ARG A . n A 1 345 ALA 345 412 412 ALA ALA A . n A 1 346 ARG 346 413 413 ARG ARG A . n A 1 347 LEU 347 414 414 LEU LEU A . n A 1 348 ALA 348 415 415 ALA ALA A . n A 1 349 ALA 349 416 416 ALA ALA A . n A 1 350 LYS 350 417 417 LYS LYS A . n A 1 351 GLY 351 418 418 GLY GLY A . n A 1 352 ARG 352 419 ? ? ? A . n A 1 353 ILE 353 420 ? ? ? A . n A 1 354 GLN 354 421 ? ? ? A . n A 1 355 SER 355 422 ? ? ? A . n A 1 356 GLU 356 423 ? ? ? A . n A 1 357 GLN 357 424 ? ? ? A . n A 1 358 GLN 358 425 ? ? ? A . n A 1 359 PHE 359 426 ? ? ? A . n A 1 360 GLN 360 427 ? ? ? A . n A 1 361 ASN 361 428 ? ? ? A . n A 1 362 GLY 362 429 ? ? ? A . n A 1 363 GLN 363 430 ? ? ? A . n A 1 364 PRO 364 431 ? ? ? A . n A 1 365 ARG 365 432 ? ? ? A . n A 1 366 PRO 366 433 ? ? ? A . n A 1 367 GLU 367 434 ? ? ? A . n A 1 368 ASN 368 435 ? ? ? A . n A 1 369 LEU 369 436 ? ? ? A . n A 1 370 TYR 370 437 ? ? ? A . n A 1 371 PHE 371 438 ? ? ? A . n A 1 372 GLN 372 439 ? ? ? A . n # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name REFMAC _software.os ? _software.os_version ? _software.type ? _software.version 5.8.0274 _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7EK2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7EK2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7EK2 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] 0.428 _refine.aniso_B[1][2] 0.009 _refine.aniso_B[1][3] 0.004 _refine.aniso_B[2][2] 0.374 _refine.aniso_B[2][3] 0.009 _refine.aniso_B[3][3] -0.802 _refine.B_iso_max ? _refine.B_iso_mean 72.646 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.779 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7EK2 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.700 _refine.ls_d_res_low 119.520 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work 173687 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.000 _refine.ls_percent_reflns_R_free 0.000 _refine.ls_R_factor_all 0.368 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.3676 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work 0.368 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'BABINET MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.128 _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B 5.162 _refine.overall_SU_ML 0.107 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall 0.9038 _refine.pdbx_average_fsc_work 0.9038 _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.013 0.013 2766 ? r_bond_refined_d ? ? 'ELECTRON MICROSCOPY' ? 0.050 0.017 2734 ? r_bond_other_d ? ? 'ELECTRON MICROSCOPY' ? 0.314 0.100 251 ? r_ext_dist_refined_d ? ? 'ELECTRON MICROSCOPY' ? 1.728 1.624 3762 ? r_angle_refined_deg ? ? 'ELECTRON MICROSCOPY' ? 1.704 1.566 6271 ? r_angle_other_deg ? ? 'ELECTRON MICROSCOPY' ? 4.734 5.000 340 ? r_dihedral_angle_1_deg ? ? 'ELECTRON MICROSCOPY' ? 27.394 20.292 137 ? r_dihedral_angle_2_deg ? ? 'ELECTRON MICROSCOPY' ? 15.073 15.000 487 ? r_dihedral_angle_3_deg ? ? 'ELECTRON MICROSCOPY' ? 19.259 15.000 24 ? r_dihedral_angle_4_deg ? ? 'ELECTRON MICROSCOPY' ? 0.055 0.200 374 ? r_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 0.020 3040 ? r_gen_planes_refined ? ? 'ELECTRON MICROSCOPY' ? 0.001 0.020 638 ? r_gen_planes_other ? ? 'ELECTRON MICROSCOPY' ? 0.193 0.200 1104 ? r_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? 0.153 0.200 4880 ? r_symmetry_nbd_other ? ? 'ELECTRON MICROSCOPY' ? 0.163 0.200 2818 ? r_nbtor_refined ? ? 'ELECTRON MICROSCOPY' ? 0.074 0.200 3072 ? r_symmetry_nbtor_other ? ? 'ELECTRON MICROSCOPY' ? 0.225 0.200 54 ? r_xyhbond_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? 0.102 0.200 44 ? r_symmetry_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? 0.170 0.200 202 ? r_nbd_other ? ? 'ELECTRON MICROSCOPY' ? 0.187 0.200 20 ? r_symmetry_xyhbond_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? 7.468 7.025 1363 ? r_mcbond_it ? ? 'ELECTRON MICROSCOPY' ? 7.453 7.010 1361 ? r_mcbond_other ? ? 'ELECTRON MICROSCOPY' ? 9.863 10.594 1702 ? r_mcangle_it ? ? 'ELECTRON MICROSCOPY' ? 9.867 10.593 1702 ? r_mcangle_other ? ? 'ELECTRON MICROSCOPY' ? 9.587 8.107 1403 ? r_scbond_it ? ? 'ELECTRON MICROSCOPY' ? 9.584 8.113 1404 ? r_scbond_other ? ? 'ELECTRON MICROSCOPY' ? 14.287 11.749 2060 ? r_scangle_it ? ? 'ELECTRON MICROSCOPY' ? 14.287 11.756 2061 ? r_scangle_other ? ? 'ELECTRON MICROSCOPY' ? 18.398 138.724 11196 ? r_lrange_it ? ? 'ELECTRON MICROSCOPY' ? 18.379 138.631 11191 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'ELECTRON MICROSCOPY' 2.700 2.770 12911 . 0 12911 100.0000 . 1.747 . . . 1.747 . . . . . 1.747 . 20 . 0.758 . 'ELECTRON MICROSCOPY' 2.770 2.846 12468 . 0 12468 100.0000 . 1.004 . . . 1.004 . . . . . 1.004 . 20 . 0.828 . 'ELECTRON MICROSCOPY' 2.846 2.928 12153 . 0 12153 100.0000 . 0.869 . . . 0.869 . . . . . 0.869 . 20 . 0.880 . 'ELECTRON MICROSCOPY' 2.928 3.019 11835 . 0 11835 100.0000 . 0.690 . . . 0.690 . . . . . 0.690 . 20 . 0.898 . 'ELECTRON MICROSCOPY' 3.019 3.117 11554 . 0 11554 100.0000 . 0.468 . . . 0.468 . . . . . 0.468 . 20 . 0.922 . 'ELECTRON MICROSCOPY' 3.117 3.227 11024 . 0 11024 100.0000 . 0.298 . . . 0.298 . . . . . 0.298 . 20 . 0.943 . 'ELECTRON MICROSCOPY' 3.227 3.349 10648 . 0 10648 100.0000 . 0.228 . . . 0.228 . . . . . 0.228 . 20 . 0.950 . 'ELECTRON MICROSCOPY' 3.349 3.485 10350 . 0 10350 100.0000 . 0.205 . . . 0.205 . . . . . 0.205 . 20 . 0.952 . 'ELECTRON MICROSCOPY' 3.485 3.640 9845 . 0 9845 100.0000 . 0.211 . . . 0.211 . . . . . 0.211 . 20 . 0.964 . 'ELECTRON MICROSCOPY' 3.640 3.817 9468 . 0 9468 100.0000 . 0.238 . . . 0.238 . . . . . 0.238 . 20 . 0.965 . 'ELECTRON MICROSCOPY' 3.817 4.024 8931 . 0 8931 100.0000 . 0.288 . . . 0.288 . . . . . 0.288 . 20 . 0.962 . 'ELECTRON MICROSCOPY' 4.024 4.267 8548 . 0 8548 100.0000 . 0.309 . . . 0.309 . . . . . 0.309 . 20 . 0.957 . 'ELECTRON MICROSCOPY' 4.267 4.562 7928 . 0 7928 100.0000 . 0.317 . . . 0.317 . . . . . 0.317 . 20 . 0.954 . 'ELECTRON MICROSCOPY' 4.562 4.927 7430 . 0 7430 100.0000 . 0.287 . . . 0.287 . . . . . 0.287 . 20 . 0.949 . 'ELECTRON MICROSCOPY' 4.927 5.396 6854 . 0 6854 100.0000 . 0.271 . . . 0.271 . . . . . 0.271 . 20 . 0.932 . 'ELECTRON MICROSCOPY' 5.396 6.031 6159 . 0 6159 100.0000 . 0.329 . . . 0.329 . . . . . 0.329 . 20 . 0.880 . 'ELECTRON MICROSCOPY' 6.031 6.961 5450 . 0 5450 100.0000 . 0.458 . . . 0.458 . . . . . 0.458 . 20 . 0.822 . 'ELECTRON MICROSCOPY' 6.961 8.519 4611 . 0 4611 100.0000 . 0.403 . . . 0.403 . . . . . 0.403 . 20 . 0.848 . 'ELECTRON MICROSCOPY' 8.519 12.017 3567 . 0 3567 100.0000 . 0.273 . . . 0.273 . . . . . 0.273 . 20 . 0.929 . 'ELECTRON MICROSCOPY' 12.017 119.520 1953 . 0 1953 100.0000 . 1.055 . . . 1.055 . . . . . 1.055 . 20 . 0.530 . # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.vector[2] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[3] _struct_ncs_oper.details 1 given 1 0 0 0 0 1 0 0 0 0 1 0 ? 2 generate 0.309016994 -0.951056516 0 130.837709 0.951056516 0.309016994 0 -20.7226573 0 0 1 0 ? 3 generate -0.809016994 -0.587785252 0 190.977203 0.587785252 -0.809016994 0 97.3077452 0 0 1 0 ? 4 generate -0.809016994 0.587785252 0 97.3077452 -0.587785252 -0.809016994 0 190.977203 0 0 1 0 ? 5 generate 0.309016994 0.951056516 0 -20.7226573 -0.951056516 0.309016994 0 130.837709 0 0 1 0 ? # _struct.entry_id 7EK2 _struct.title 'Cryo-EM structure of VCCN1 in lipid nanodisc' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7EK2 _struct_keywords.text 'Ion channel, Thylakoid, Photosynthesis, Bestrophin family, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A498JCY7_MALDO _struct_ref.pdbx_db_accession A0A498JCY7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PNPSPPSSSSPVQTLISILRIIPDWSDRTQERGMRQHRTLYDHEKWMHHRSSYRHLRHLLSSLSSRVILSLIPPVIAFTL VAVVIASYNTAVALDLLPGIFPLLRSSSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTEVIAGANDFARQIISSVET SGDAQLKKALLQYIVAFPVALKCHVIYGSDIARDLQNLLEVDDLLVVLNSKHRPGCIIQFISRSLQLLKLEESRRIMLQS KISCFHEGIGICEQLIGTPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEQVGVLIEEPFPMLA LDDLCNSVRNNVQEALASEKLIRARLAAKGRIQSEQQFQNGQPRP ; _struct_ref.pdbx_align_begin 69 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7EK2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 366 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A498JCY7 _struct_ref_seq.db_align_beg 69 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 433 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 69 _struct_ref_seq.pdbx_auth_seq_align_end 433 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7EK2 MET A 1 ? UNP A0A498JCY7 ? ? 'initiating methionine' 68 1 1 7EK2 SER A 140 ? UNP A0A498JCY7 ALA 207 conflict 207 2 1 7EK2 GLU A 367 ? UNP A0A498JCY7 ? ? 'expression tag' 434 3 1 7EK2 ASN A 368 ? UNP A0A498JCY7 ? ? 'expression tag' 435 4 1 7EK2 LEU A 369 ? UNP A0A498JCY7 ? ? 'expression tag' 436 5 1 7EK2 TYR A 370 ? UNP A0A498JCY7 ? ? 'expression tag' 437 6 1 7EK2 PHE A 371 ? UNP A0A498JCY7 ? ? 'expression tag' 438 7 1 7EK2 GLN A 372 ? UNP A0A498JCY7 ? ? 'expression tag' 439 8 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete point assembly' ? pentameric 5 2 'point asymmetric unit' ? monomeric 1 3 'point asymmetric unit, std point frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-5)' A 2 1 A 3 P A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.85978775 -0.51065156 0.00000000 109.19660 0.51065156 -0.85978775 0.00000000 27.81917 0.00000000 0.00000000 1.00000000 -86.76854 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.30901699 -0.95105652 0.00000000 130.83770 0.95105652 0.30901699 0.00000000 -20.72266 0.00000000 0.00000000 1.00000000 0.00000 3 'point symmetry operation' ? ? -0.80901699 -0.58778525 0.00000000 190.97720 0.58778525 -0.80901699 0.00000000 97.30774 0.00000000 0.00000000 1.00000000 0.00000 4 'point symmetry operation' ? ? -0.80901699 0.58778525 0.00000000 97.30774 -0.58778525 -0.80901699 0.00000000 190.97719 0.00000000 0.00000000 1.00000000 0.00000 5 'point symmetry operation' ? ? 0.30901699 0.95105652 0.00000000 -20.72266 -0.95105652 0.30901699 0.00000000 130.83770 0.00000000 0.00000000 1.00000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 13 ? ARG A 21 ? VAL A 80 ARG A 88 1 ? 9 HELX_P HELX_P2 AA2 ILE A 22 ? GLY A 34 ? ILE A 89 GLY A 101 1 ? 13 HELX_P HELX_P3 AA3 ASP A 43 ? ARG A 51 ? ASP A 110 ARG A 118 1 ? 9 HELX_P HELX_P4 AA4 TYR A 54 ? SER A 62 ? TYR A 121 SER A 129 1 ? 9 HELX_P HELX_P5 AA5 SER A 66 ? LEU A 72 ? SER A 133 LEU A 139 1 ? 7 HELX_P HELX_P6 AA6 LEU A 72 ? LEU A 95 ? LEU A 139 LEU A 162 1 ? 24 HELX_P HELX_P7 AA7 SER A 109 ? VAL A 159 ? SER A 176 VAL A 226 1 ? 51 HELX_P HELX_P8 AA8 THR A 161 ? GLY A 163 ? THR A 228 GLY A 230 5 ? 3 HELX_P HELX_P9 AA9 ASP A 164 ? ILE A 187 ? ASP A 231 ILE A 254 1 ? 24 HELX_P HELX_P10 AB1 ASP A 191 ? LEU A 196 ? ASP A 258 LEU A 263 1 ? 6 HELX_P HELX_P11 AB2 GLU A 201 ? ASN A 210 ? GLU A 268 ASN A 277 1 ? 10 HELX_P HELX_P12 AB3 HIS A 213 ? LEU A 229 ? HIS A 280 LEU A 296 1 ? 17 HELX_P HELX_P13 AB4 GLU A 232 ? SER A 241 ? GLU A 299 SER A 308 1 ? 10 HELX_P HELX_P14 AB5 ILE A 243 ? THR A 259 ? ILE A 310 THR A 326 1 ? 17 HELX_P HELX_P15 AB6 PRO A 262 ? HIS A 289 ? PRO A 329 HIS A 356 1 ? 28 HELX_P HELX_P16 AB7 ILE A 291 ? ILE A 313 ? ILE A 358 ILE A 380 1 ? 23 HELX_P HELX_P17 AB8 PRO A 316 ? LEU A 320 ? PRO A 383 LEU A 387 5 ? 5 HELX_P HELX_P18 AB9 ALA A 321 ? GLY A 351 ? ALA A 388 GLY A 418 1 ? 31 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLN _pdbx_validate_rmsd_bond.auth_seq_id_1 401 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 O _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLN _pdbx_validate_rmsd_bond.auth_seq_id_2 401 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.345 _pdbx_validate_rmsd_bond.bond_target_value 1.229 _pdbx_validate_rmsd_bond.bond_deviation 0.116 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 125 ? ? CZ A ARG 125 ? ? NH1 A ARG 125 ? ? 123.34 120.30 3.04 0.50 N 2 1 NE A ARG 125 ? ? CZ A ARG 125 ? ? NH2 A ARG 125 ? ? 116.86 120.30 -3.44 0.50 N 3 1 NE A ARG 134 ? ? CZ A ARG 134 ? ? NH2 A ARG 134 ? ? 116.89 120.30 -3.41 0.50 N 4 1 NE A ARG 200 ? ? CZ A ARG 200 ? ? NH1 A ARG 200 ? ? 116.56 120.30 -3.74 0.50 N 5 1 NE A ARG 200 ? ? CZ A ARG 200 ? ? NH2 A ARG 200 ? ? 124.28 120.30 3.98 0.50 N 6 1 NE A ARG 338 ? ? CZ A ARG 338 ? ? NH1 A ARG 338 ? ? 124.26 120.30 3.96 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 110 ? ? -103.48 -168.57 2 1 ARG A 118 ? ? -99.57 46.93 3 1 HIS A 356 ? ? 52.69 -130.77 # _pdbx_point_symmetry.entry_id 7EK2 _pdbx_point_symmetry.Schoenflies_symbol C _pdbx_point_symmetry.circular_symmetry 5 # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 7EK2 _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'SER 207 is the natural mutation, which appeared in the sequence amplified from the cDNA library.' _pdbx_entry_details.source_details ? # _em_3d_fitting.entry_id 7EK2 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7EK2 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 345938 _em_3d_reconstruction.resolution 2.7 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8.0 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Bestrophin-like protein' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 7EK2 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 277 _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 7EK2 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7EK2 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 7EK2 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C5 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 68 ? A MET 1 2 1 Y 1 A PRO 69 ? A PRO 2 3 1 Y 1 A ASN 70 ? A ASN 3 4 1 Y 1 A PRO 71 ? A PRO 4 5 1 Y 1 A SER 72 ? A SER 5 6 1 Y 1 A PRO 73 ? A PRO 6 7 1 Y 1 A PRO 74 ? A PRO 7 8 1 Y 1 A SER 75 ? A SER 8 9 1 Y 1 A SER 76 ? A SER 9 10 1 Y 1 A SER 77 ? A SER 10 11 1 Y 1 A ARG 419 ? A ARG 352 12 1 Y 1 A ILE 420 ? A ILE 353 13 1 Y 1 A GLN 421 ? A GLN 354 14 1 Y 1 A SER 422 ? A SER 355 15 1 Y 1 A GLU 423 ? A GLU 356 16 1 Y 1 A GLN 424 ? A GLN 357 17 1 Y 1 A GLN 425 ? A GLN 358 18 1 Y 1 A PHE 426 ? A PHE 359 19 1 Y 1 A GLN 427 ? A GLN 360 20 1 Y 1 A ASN 428 ? A ASN 361 21 1 Y 1 A GLY 429 ? A GLY 362 22 1 Y 1 A GLN 430 ? A GLN 363 23 1 Y 1 A PRO 431 ? A PRO 364 24 1 Y 1 A ARG 432 ? A ARG 365 25 1 Y 1 A PRO 433 ? A PRO 366 26 1 Y 1 A GLU 434 ? A GLU 367 27 1 Y 1 A ASN 435 ? A ASN 368 28 1 Y 1 A LEU 436 ? A LEU 369 29 1 Y 1 A TYR 437 ? A TYR 370 30 1 Y 1 A PHE 438 ? A PHE 371 31 1 Y 1 A GLN 439 ? A GLN 372 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 3750 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Malus domestica' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell HEK293 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 48 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 2271 # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? RELION 3.1 1 ? ? 2 'PARTICLE SELECTION' ? ? ? ? ? ? 3 'VOLUME SELECTION' ? ? ? ? ? ? 4 CLASSIFICATION ? ? ? ? ? ? 5 MASKING ? ? ? ? ? ? 6 RECONSTRUCTION ? ? ? ? ? ? 7 'INITIAL EULER ASSIGNMENT' ? ? ? ? ? ? 8 'FINAL EULER ASSIGNMENT' ? ? ? ? ? ? 9 'CTF CORRECTION' ? CTFFIND 4.1.13 1 ? ? 10 'INITIAL EULER ASSIGNMENT' ? RELION 3.1 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? RELION 3.1 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 'MODEL REFINEMENT' ? ? ? ? ? ? 14 RECONSTRUCTION ? RELION 3.1 1 ? ? 15 'MOLECULAR REPLACEMENT' ? ? ? ? ? ? 16 'LATTICE DISTORTION CORRECTION' ? ? ? ? ? ? 17 'SYMMETRY DETERMINATION' ? ? ? ? ? ? 18 'CRYSTALLOGRAPHY MERGING' ? ? ? ? ? ? 19 OTHER ? ? ? ? ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _atom_sites.entry_id 7EK2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 0.867 # loop_