HEADER OXIDOREDUCTASE 06-MAY-21 7ER9 TITLE CRYSTAL STRUCTURE OF HUMAN BILIVERDIN IX-BETA REDUCTASE B WITH TITLE 2 FEBUXOSTAT (TEI) COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVIN REDUCTASE (NADPH); COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FR,BILIVERDIN REDUCTASE B,BVR-B,BILIVERDIN-IX BETA- COMPND 5 REDUCTASE,GREEN HEME-BINDING PROTEIN,GHBP,NADPH-DEPENDENT DIAPHORASE, COMPND 6 NADPH-FLAVIN REDUCTASE,FLR; COMPND 7 EC: 1.5.1.30,1.3.1.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BLVRB, FLR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PLATELETS, BILIVERDIN REDUCTASE B, BLVRB, INHIBITORS, NADP, KEYWDS 2 FEBUXOSTAT, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.GRIESINGER,D.LEE,K.S.RYU,M.KIM,J.H.HA REVDAT 3 29-NOV-23 7ER9 1 REMARK REVDAT 2 23-FEB-22 7ER9 1 JRNL REVDAT 1 19-JAN-22 7ER9 0 JRNL AUTH M.KIM,J.H.HA,J.CHOI,B.R.KIM,V.GAPSYS,K.O.LEE,J.G.JEE, JRNL AUTH 2 K.S.CHAKRABARTI,B.L.DE GROOT,C.GRIESINGER,K.S.RYU,D.LEE JRNL TITL REPOSITIONING FOOD AND DRUG ADMINISTRATION-APPROVED DRUGS JRNL TITL 2 FOR INHIBITING BILIVERDIN IX BETA REDUCTASE B AS A NOVEL JRNL TITL 3 THROMBOCYTOPENIA THERAPEUTIC TARGET. JRNL REF J.MED.CHEM. V. 65 2548 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 34957824 JRNL DOI 10.1021/ACS.JMEDCHEM.1C01664 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.450 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 69792 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.4900 - 2.7700 0.97 4978 148 0.1483 0.2030 REMARK 3 2 2.7700 - 2.4200 0.99 5015 148 0.1528 0.2000 REMARK 3 3 2.4200 - 2.2000 0.96 4836 143 0.1406 0.1649 REMARK 3 4 2.2000 - 2.0400 0.98 4911 145 0.1437 0.1675 REMARK 3 5 2.0400 - 1.9200 0.99 4931 145 0.1468 0.1912 REMARK 3 6 1.9200 - 1.8300 0.96 4782 141 0.1477 0.1967 REMARK 3 7 1.8300 - 1.7500 0.97 4826 142 0.1556 0.2015 REMARK 3 8 1.7500 - 1.6800 0.97 4832 142 0.1699 0.2021 REMARK 3 9 1.6800 - 1.6200 0.97 4797 142 0.1681 0.1822 REMARK 3 10 1.6200 - 1.5700 0.96 4752 140 0.1812 0.2205 REMARK 3 11 1.5700 - 1.5300 0.94 4638 137 0.1982 0.2155 REMARK 3 12 1.5300 - 1.4900 0.96 4704 138 0.2255 0.2563 REMARK 3 13 1.4900 - 1.4500 0.92 4540 134 0.2572 0.2627 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.127 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.135 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3403 REMARK 3 ANGLE : 1.226 4670 REMARK 3 CHIRALITY : 0.086 539 REMARK 3 PLANARITY : 0.007 587 REMARK 3 DIHEDRAL : 13.990 1904 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2122 6.3830 -15.9506 REMARK 3 T TENSOR REMARK 3 T11: 0.1227 T22: 0.1858 REMARK 3 T33: 0.1078 T12: -0.0256 REMARK 3 T13: 0.0288 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 1.5251 L22: 3.0160 REMARK 3 L33: 2.1327 L12: -0.9786 REMARK 3 L13: 0.2960 L23: 1.0309 REMARK 3 S TENSOR REMARK 3 S11: 0.1955 S12: 0.3570 S13: 0.2726 REMARK 3 S21: -0.3452 S22: 0.1412 S23: -0.2144 REMARK 3 S31: -0.2555 S32: 0.2154 S33: -0.3457 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.4844 11.3768 -11.4386 REMARK 3 T TENSOR REMARK 3 T11: 0.1310 T22: 0.1070 REMARK 3 T33: 0.1316 T12: 0.0009 REMARK 3 T13: 0.0201 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 2.1641 L22: 1.0922 REMARK 3 L33: 1.2046 L12: 0.1903 REMARK 3 L13: -0.0922 L23: 0.1849 REMARK 3 S TENSOR REMARK 3 S11: 0.0165 S12: 0.1720 S13: 0.3241 REMARK 3 S21: -0.0782 S22: 0.0860 S23: -0.0259 REMARK 3 S31: -0.1219 S32: -0.0048 S33: -0.0797 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.4878 8.1802 -7.1903 REMARK 3 T TENSOR REMARK 3 T11: 0.1310 T22: 0.1245 REMARK 3 T33: 0.1484 T12: 0.0225 REMARK 3 T13: 0.0233 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 1.5517 L22: 0.7997 REMARK 3 L33: 1.8163 L12: 0.1616 REMARK 3 L13: -0.3772 L23: -0.3109 REMARK 3 S TENSOR REMARK 3 S11: 0.0845 S12: 0.1336 S13: 0.3596 REMARK 3 S21: 0.0254 S22: 0.0541 S23: 0.1508 REMARK 3 S31: -0.2500 S32: -0.2014 S33: -0.1076 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.6048 -5.1337 -2.5141 REMARK 3 T TENSOR REMARK 3 T11: 0.1069 T22: 0.0931 REMARK 3 T33: 0.0678 T12: 0.0063 REMARK 3 T13: 0.0151 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.6748 L22: 1.0926 REMARK 3 L33: 1.7084 L12: 0.3027 REMARK 3 L13: -0.0857 L23: 0.4197 REMARK 3 S TENSOR REMARK 3 S11: -0.0187 S12: -0.0277 S13: -0.1181 REMARK 3 S21: 0.0711 S22: 0.0310 S23: 0.0044 REMARK 3 S31: 0.0842 S32: 0.0257 S33: -0.0448 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.4805 -6.4791 3.9339 REMARK 3 T TENSOR REMARK 3 T11: 0.1251 T22: 0.1315 REMARK 3 T33: 0.0775 T12: -0.0133 REMARK 3 T13: 0.0090 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.8485 L22: 0.7729 REMARK 3 L33: 2.8147 L12: 0.4299 REMARK 3 L13: 0.1106 L23: 0.8548 REMARK 3 S TENSOR REMARK 3 S11: 0.0513 S12: -0.1878 S13: -0.0807 REMARK 3 S21: 0.0156 S22: -0.0223 S23: -0.0661 REMARK 3 S31: 0.0291 S32: -0.0463 S33: -0.0250 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2725 0.6382 -0.3678 REMARK 3 T TENSOR REMARK 3 T11: 0.1037 T22: 0.1094 REMARK 3 T33: 0.1004 T12: 0.0002 REMARK 3 T13: -0.0049 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.9217 L22: 1.6251 REMARK 3 L33: 0.5762 L12: 0.8806 REMARK 3 L13: -0.1100 L23: 0.0240 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: -0.2259 S13: -0.0292 REMARK 3 S21: 0.0772 S22: -0.0397 S23: -0.1492 REMARK 3 S31: -0.0165 S32: 0.0548 S33: 0.0368 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 175 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2262 1.7520 -5.1917 REMARK 3 T TENSOR REMARK 3 T11: 0.1021 T22: 0.1273 REMARK 3 T33: 0.1299 T12: -0.0002 REMARK 3 T13: 0.0132 T23: -0.0280 REMARK 3 L TENSOR REMARK 3 L11: 1.0920 L22: 1.4954 REMARK 3 L33: 1.0051 L12: -0.1245 REMARK 3 L13: -0.1242 L23: -0.3066 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: 0.0228 S13: -0.0171 REMARK 3 S21: -0.0273 S22: -0.0167 S23: -0.1916 REMARK 3 S31: 0.0298 S32: 0.1242 S33: -0.0151 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.3729 -31.9393 -1.1072 REMARK 3 T TENSOR REMARK 3 T11: 0.1713 T22: 0.1101 REMARK 3 T33: 0.2327 T12: 0.0113 REMARK 3 T13: -0.0295 T23: 0.0487 REMARK 3 L TENSOR REMARK 3 L11: 2.3464 L22: 2.5009 REMARK 3 L33: 1.2090 L12: -0.5103 REMARK 3 L13: 0.4256 L23: 0.5632 REMARK 3 S TENSOR REMARK 3 S11: 0.0811 S12: 0.1905 S13: -0.0307 REMARK 3 S21: -0.3248 S22: -0.0611 S23: 0.2534 REMARK 3 S31: -0.0579 S32: -0.0325 S33: -0.0297 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.4699 -22.1409 8.6000 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.1658 REMARK 3 T33: 0.2477 T12: -0.0059 REMARK 3 T13: 0.0086 T23: 0.0818 REMARK 3 L TENSOR REMARK 3 L11: 0.6176 L22: 2.6123 REMARK 3 L33: 0.4938 L12: -0.3811 REMARK 3 L13: -0.3783 L23: 0.2049 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: -0.1955 S13: -0.2793 REMARK 3 S21: 0.1001 S22: -0.0362 S23: 0.2978 REMARK 3 S31: 0.0235 S32: -0.0337 S33: 0.0053 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.7505 -17.2561 13.0798 REMARK 3 T TENSOR REMARK 3 T11: 0.1854 T22: 0.2183 REMARK 3 T33: 0.1791 T12: 0.0067 REMARK 3 T13: 0.0256 T23: 0.0725 REMARK 3 L TENSOR REMARK 3 L11: 1.0664 L22: 1.1845 REMARK 3 L33: 0.2484 L12: -0.1531 REMARK 3 L13: 0.0493 L23: 0.5304 REMARK 3 S TENSOR REMARK 3 S11: -0.1233 S12: -0.1915 S13: -0.1266 REMARK 3 S21: 0.1672 S22: 0.1083 S23: 0.1828 REMARK 3 S31: 0.0254 S32: -0.0605 S33: 0.0117 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 156 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4978 -24.3161 13.8366 REMARK 3 T TENSOR REMARK 3 T11: 0.1752 T22: 0.2440 REMARK 3 T33: 0.2234 T12: -0.0030 REMARK 3 T13: -0.0478 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 1.3433 L22: 2.6044 REMARK 3 L33: 2.5001 L12: -0.4472 REMARK 3 L13: -0.0973 L23: 0.5561 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: -0.3133 S13: -0.0847 REMARK 3 S21: 0.3016 S22: 0.1599 S23: -0.3390 REMARK 3 S31: 0.0009 S32: 0.3564 S33: -0.1321 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ER9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1300022041. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 11C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97942 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 1.16_3549 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69794 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.449 REMARK 200 RESOLUTION RANGE LOW (A) : 47.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.06665 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.4300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39430 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1HE5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9-2.0M AMMONIUM SULFATE, 0.1M BIS REMARK 280 -TRIS (PH 6.5), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 41.02050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.67600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.02050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.67600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 556 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 623 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 118 O HOH A 501 2.06 REMARK 500 O HOH A 665 O HOH A 689 2.06 REMARK 500 NH1 ARG B 140 O HOH B 501 2.11 REMARK 500 O HOH B 515 O HOH B 651 2.13 REMARK 500 O HOH A 654 O HOH A 672 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 619 O HOH A 619 2555 1.96 REMARK 500 O HOH A 670 O HOH B 682 3455 2.11 REMARK 500 O HOH A 665 O HOH B 654 3455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 134 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 MET B 185 CG - SD - CE ANGL. DEV. = 9.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 4 -36.58 -130.56 REMARK 500 ARG A 78 -127.37 52.63 REMARK 500 THR A 110 -106.63 -114.68 REMARK 500 PRO A 152 -153.73 -82.09 REMARK 500 THR B 110 -111.02 -115.70 REMARK 500 PRO B 152 -149.31 -80.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 734 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH B 729 DISTANCE = 6.12 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TEI A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TEI B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 404 DBREF 7ER9 A 1 206 UNP P30043 BLVRB_HUMAN 1 206 DBREF 7ER9 B 1 206 UNP P30043 BLVRB_HUMAN 1 206 SEQADV 7ER9 HIS A -9 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS A -8 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS A -7 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS A -6 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS A -5 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS A -4 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS A -3 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS A -2 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS A -1 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS A 0 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B -9 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B -8 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B -7 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B -6 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B -5 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B -4 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B -3 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B -2 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B -1 UNP P30043 EXPRESSION TAG SEQADV 7ER9 HIS B 0 UNP P30043 EXPRESSION TAG SEQRES 1 A 216 HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS MET ALA VAL SEQRES 2 A 216 LYS LYS ILE ALA ILE PHE GLY ALA THR GLY GLN THR GLY SEQRES 3 A 216 LEU THR THR LEU ALA GLN ALA VAL GLN ALA GLY TYR GLU SEQRES 4 A 216 VAL THR VAL LEU VAL ARG ASP SER SER ARG LEU PRO SER SEQRES 5 A 216 GLU GLY PRO ARG PRO ALA HIS VAL VAL VAL GLY ASP VAL SEQRES 6 A 216 LEU GLN ALA ALA ASP VAL ASP LYS THR VAL ALA GLY GLN SEQRES 7 A 216 ASP ALA VAL ILE VAL LEU LEU GLY THR ARG ASN ASP LEU SEQRES 8 A 216 SER PRO THR THR VAL MET SER GLU GLY ALA ARG ASN ILE SEQRES 9 A 216 VAL ALA ALA MET LYS ALA HIS GLY VAL ASP LYS VAL VAL SEQRES 10 A 216 ALA CYS THR SER ALA PHE LEU LEU TRP ASP PRO THR LYS SEQRES 11 A 216 VAL PRO PRO ARG LEU GLN ALA VAL THR ASP ASP HIS ILE SEQRES 12 A 216 ARG MET HIS LYS VAL LEU ARG GLU SER GLY LEU LYS TYR SEQRES 13 A 216 VAL ALA VAL MET PRO PRO HIS ILE GLY ASP GLN PRO LEU SEQRES 14 A 216 THR GLY ALA TYR THR VAL THR LEU ASP GLY ARG GLY PRO SEQRES 15 A 216 SER ARG VAL ILE SER LYS HIS ASP LEU GLY HIS PHE MET SEQRES 16 A 216 LEU ARG CYS LEU THR THR ASP GLU TYR ASP GLY HIS SER SEQRES 17 A 216 THR TYR PRO SER HIS GLN TYR GLN SEQRES 1 B 216 HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS MET ALA VAL SEQRES 2 B 216 LYS LYS ILE ALA ILE PHE GLY ALA THR GLY GLN THR GLY SEQRES 3 B 216 LEU THR THR LEU ALA GLN ALA VAL GLN ALA GLY TYR GLU SEQRES 4 B 216 VAL THR VAL LEU VAL ARG ASP SER SER ARG LEU PRO SER SEQRES 5 B 216 GLU GLY PRO ARG PRO ALA HIS VAL VAL VAL GLY ASP VAL SEQRES 6 B 216 LEU GLN ALA ALA ASP VAL ASP LYS THR VAL ALA GLY GLN SEQRES 7 B 216 ASP ALA VAL ILE VAL LEU LEU GLY THR ARG ASN ASP LEU SEQRES 8 B 216 SER PRO THR THR VAL MET SER GLU GLY ALA ARG ASN ILE SEQRES 9 B 216 VAL ALA ALA MET LYS ALA HIS GLY VAL ASP LYS VAL VAL SEQRES 10 B 216 ALA CYS THR SER ALA PHE LEU LEU TRP ASP PRO THR LYS SEQRES 11 B 216 VAL PRO PRO ARG LEU GLN ALA VAL THR ASP ASP HIS ILE SEQRES 12 B 216 ARG MET HIS LYS VAL LEU ARG GLU SER GLY LEU LYS TYR SEQRES 13 B 216 VAL ALA VAL MET PRO PRO HIS ILE GLY ASP GLN PRO LEU SEQRES 14 B 216 THR GLY ALA TYR THR VAL THR LEU ASP GLY ARG GLY PRO SEQRES 15 B 216 SER ARG VAL ILE SER LYS HIS ASP LEU GLY HIS PHE MET SEQRES 16 B 216 LEU ARG CYS LEU THR THR ASP GLU TYR ASP GLY HIS SER SEQRES 17 B 216 THR TYR PRO SER HIS GLN TYR GLN HET NAP A 401 48 HET TEI A 402 22 HET SO4 A 403 5 HET SO4 A 404 5 HET NAP B 401 48 HET TEI B 402 22 HET SO4 B 403 5 HET SO4 B 404 5 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM TEI 2-(3-CYANO-4-ISOBUTOXY-PHENYL)-4-METHYL-5-THIAZOLE- HETNAM 2 TEI CARBOXYLIC ACID HETNAM SO4 SULFATE ION HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 4 TEI 2(C16 H16 N2 O3 S) FORMUL 5 SO4 4(O4 S 2-) FORMUL 11 HOH *463(H2 O) HELIX 1 AA1 GLY A 13 ALA A 26 1 14 HELIX 2 AA2 GLN A 57 ALA A 66 1 10 HELIX 3 AA3 THR A 85 GLY A 102 1 18 HELIX 4 AA4 SER A 111 TRP A 116 5 6 HELIX 5 AA5 ASP A 117 VAL A 121 5 5 HELIX 6 AA6 PRO A 122 ARG A 124 5 3 HELIX 7 AA7 LEU A 125 SER A 142 1 18 HELIX 8 AA8 LYS A 178 CYS A 188 1 11 HELIX 9 AA9 LEU A 189 THR A 191 5 3 HELIX 10 AB1 GLY B 13 GLY B 27 1 15 HELIX 11 AB2 ASP B 36 LEU B 40 5 5 HELIX 12 AB3 GLN B 57 ALA B 66 1 10 HELIX 13 AB4 THR B 85 GLY B 102 1 18 HELIX 14 AB5 SER B 111 TRP B 116 5 6 HELIX 15 AB6 ASP B 117 VAL B 121 5 5 HELIX 16 AB7 PRO B 122 ARG B 124 5 3 HELIX 17 AB8 LEU B 125 GLU B 141 1 17 HELIX 18 AB9 LYS B 178 CYS B 188 1 11 HELIX 19 AC1 LEU B 189 THR B 191 5 3 SHEET 1 AA1 8 HIS A 49 VAL A 52 0 SHEET 2 AA1 8 GLU A 29 VAL A 34 1 N VAL A 32 O VAL A 51 SHEET 3 AA1 8 LYS A 5 PHE A 9 1 N ILE A 6 O THR A 31 SHEET 4 AA1 8 ALA A 70 VAL A 73 1 O ILE A 72 N ALA A 7 SHEET 5 AA1 8 LYS A 105 CYS A 109 1 O VAL A 107 N VAL A 71 SHEET 6 AA1 8 LYS A 145 VAL A 149 1 O LYS A 145 N VAL A 106 SHEET 7 AA1 8 SER A 198 SER A 202 1 O THR A 199 N ALA A 148 SHEET 8 AA1 8 THR A 164 LEU A 167 -1 N THR A 164 O SER A 202 SHEET 1 AA2 2 HIS A 153 GLY A 155 0 SHEET 2 AA2 2 VAL A 175 SER A 177 1 O ILE A 176 N HIS A 153 SHEET 1 AA3 8 HIS B 49 VAL B 52 0 SHEET 2 AA3 8 GLU B 29 VAL B 34 1 N VAL B 32 O VAL B 51 SHEET 3 AA3 8 LYS B 5 PHE B 9 1 N ILE B 6 O THR B 31 SHEET 4 AA3 8 ALA B 70 VAL B 73 1 O ILE B 72 N ALA B 7 SHEET 5 AA3 8 LYS B 105 CYS B 109 1 O VAL B 107 N VAL B 71 SHEET 6 AA3 8 LYS B 145 VAL B 149 1 O LYS B 145 N VAL B 106 SHEET 7 AA3 8 SER B 198 SER B 202 1 O THR B 199 N ALA B 148 SHEET 8 AA3 8 THR B 164 LEU B 167 -1 N THR B 164 O SER B 202 SHEET 1 AA4 2 HIS B 153 GLY B 155 0 SHEET 2 AA4 2 VAL B 175 SER B 177 1 O ILE B 176 N GLY B 155 SITE 1 AC1 37 GLY A 10 THR A 12 GLY A 13 GLN A 14 SITE 2 AC1 37 THR A 15 ARG A 35 SER A 38 ASP A 54 SITE 3 AC1 37 VAL A 55 LEU A 74 LEU A 75 GLY A 76 SITE 4 AC1 37 THR A 77 ARG A 78 VAL A 86 MET A 87 SITE 5 AC1 37 CYS A 109 THR A 110 SER A 111 HIS A 132 SITE 6 AC1 37 PRO A 151 PRO A 152 HIS A 153 ILE A 154 SITE 7 AC1 37 TEI A 402 HOH A 531 HOH A 550 HOH A 554 SITE 8 AC1 37 HOH A 580 HOH A 584 HOH A 595 HOH A 603 SITE 9 AC1 37 HOH A 615 HOH A 621 HOH A 636 SER B 82 SITE 10 AC1 37 HOH B 552 SITE 1 AC2 11 HIS A 0 SER A 111 ALA A 112 PHE A 113 SITE 2 AC2 11 TRP A 116 HIS A 132 PRO A 152 HIS A 153 SITE 3 AC2 11 ARG A 174 NAP A 401 HOH A 510 SITE 1 AC3 3 HIS A 183 HOH A 664 LYS B 4 SITE 1 AC4 4 SER A 173 ARG A 174 HOH A 532 HOH A 606 SITE 1 AC5 36 SER A 37 GLY B 10 THR B 12 GLY B 13 SITE 2 AC5 36 GLN B 14 THR B 15 ARG B 35 ARG B 39 SITE 3 AC5 36 ASP B 54 VAL B 55 LEU B 74 LEU B 75 SITE 4 AC5 36 GLY B 76 ARG B 78 CYS B 109 THR B 110 SITE 5 AC5 36 SER B 111 HIS B 132 PRO B 151 PRO B 152 SITE 6 AC5 36 HIS B 153 ILE B 154 TEI B 402 HOH B 507 SITE 7 AC5 36 HOH B 523 HOH B 531 HOH B 533 HOH B 544 SITE 8 AC5 36 HOH B 559 HOH B 561 HOH B 593 HOH B 606 SITE 9 AC5 36 HOH B 630 HOH B 631 HOH B 647 HOH B 658 SITE 1 AC6 11 ARG B 78 ALA B 112 PHE B 113 VAL B 128 SITE 2 AC6 11 HIS B 132 HIS B 153 ARG B 170 ARG B 174 SITE 3 AC6 11 NAP B 401 HOH B 522 HOH B 540 SITE 1 AC7 9 LYS A 137 ARG A 140 HOH A 600 HIS B 153 SITE 2 AC7 9 GLY B 155 ASP B 156 GLN B 157 HOH B 510 SITE 3 AC7 9 HOH B 620 SITE 1 AC8 8 LEU A 159 VAL B 3 ALA B 26 TYR B 28 SITE 2 AC8 8 HOH B 600 HOH B 624 HOH B 661 HOH B 663 CRYST1 82.041 117.352 41.606 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012189 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008521 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024035 0.00000