HEADER OXIDOREDUCTASE 06-MAY-21 7ERD TITLE CRYSTAL STRUCTURE OF HUMAN BILIVERDIN IX-BETA REDUCTASE B WITH TITLE 2 FLUNIXIN MEGLUMIN (FMG) COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVIN REDUCTASE (NADPH); COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FR,BILIVERDIN REDUCTASE B,BVR-B,BILIVERDIN-IX BETA- COMPND 5 REDUCTASE,GREEN HEME-BINDING PROTEIN,GHBP,NADPH-DEPENDENT DIAPHORASE, COMPND 6 NADPH-FLAVIN REDUCTASE,FLR; COMPND 7 EC: 1.5.1.30,1.3.1.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BLVRB, FLR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PLATELETS, BILIVERDIN REDUCTASE B, BLVRB, INHIBITORS, NADP, FLUNIXIN, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.GRIESINGER,D.LEE,K.S.RYU,M.KIM,J.H.HA REVDAT 3 29-NOV-23 7ERD 1 REMARK REVDAT 2 23-FEB-22 7ERD 1 JRNL REVDAT 1 19-JAN-22 7ERD 0 JRNL AUTH M.KIM,J.H.HA,J.CHOI,B.R.KIM,V.GAPSYS,K.O.LEE,J.G.JEE, JRNL AUTH 2 K.S.CHAKRABARTI,B.L.DE GROOT,C.GRIESINGER,K.S.RYU,D.LEE JRNL TITL REPOSITIONING FOOD AND DRUG ADMINISTRATION-APPROVED DRUGS JRNL TITL 2 FOR INHIBITING BILIVERDIN IX BETA REDUCTASE B AS A NOVEL JRNL TITL 3 THROMBOCYTOPENIA THERAPEUTIC TARGET. JRNL REF J.MED.CHEM. V. 65 2548 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 34957824 JRNL DOI 10.1021/ACS.JMEDCHEM.1C01664 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.460 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 25804 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.750 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 4.8100 - 3.8200 0.97 1827 153 0.1338 0.1562 REMARK 3 2 3.8200 - 3.3400 0.99 1850 155 0.1542 0.2393 REMARK 3 3 3.3400 - 3.0300 0.98 1806 152 0.1691 0.2348 REMARK 3 4 3.0300 - 2.8200 0.97 1767 149 0.1893 0.2342 REMARK 3 5 2.8200 - 2.6500 0.93 1707 143 0.1947 0.2921 REMARK 3 6 2.6500 - 2.5200 0.94 1731 146 0.1954 0.2441 REMARK 3 7 2.5200 - 2.4100 0.94 1708 142 0.1990 0.2492 REMARK 3 8 2.4100 - 2.3100 0.93 1678 141 0.2002 0.2637 REMARK 3 9 2.3100 - 2.2300 0.91 1668 141 0.2093 0.2332 REMARK 3 10 2.2300 - 2.1600 0.87 1564 131 0.2183 0.3002 REMARK 3 11 2.1600 - 2.1000 0.86 1547 130 0.2556 0.3062 REMARK 3 12 2.1000 - 2.0500 0.85 1550 131 0.2557 0.2936 REMARK 3 13 2.0500 - 2.0000 0.81 1444 121 0.2669 0.3015 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.236 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.625 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3333 REMARK 3 ANGLE : 0.966 4567 REMARK 3 CHIRALITY : 0.052 531 REMARK 3 PLANARITY : 0.007 572 REMARK 3 DIHEDRAL : 11.997 2289 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.0300 6.3057 -14.6140 REMARK 3 T TENSOR REMARK 3 T11: 0.2135 T22: 0.1759 REMARK 3 T33: 0.2283 T12: -0.0373 REMARK 3 T13: 0.0420 T23: 0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.4844 L22: 3.3329 REMARK 3 L33: 5.8648 L12: 0.1470 REMARK 3 L13: 0.2782 L23: 0.6358 REMARK 3 S TENSOR REMARK 3 S11: 0.3256 S12: 0.3334 S13: 0.1705 REMARK 3 S21: -0.3116 S22: 0.2632 S23: -0.1949 REMARK 3 S31: -0.3689 S32: -0.4203 S33: -0.4492 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2740 11.2533 -11.4400 REMARK 3 T TENSOR REMARK 3 T11: 0.2685 T22: 0.1982 REMARK 3 T33: 0.2193 T12: -0.0063 REMARK 3 T13: 0.0642 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 2.0987 L22: 1.8059 REMARK 3 L33: 2.6558 L12: -0.9350 REMARK 3 L13: -0.4810 L23: 1.2689 REMARK 3 S TENSOR REMARK 3 S11: 0.1662 S12: 0.0084 S13: 0.4828 REMARK 3 S21: -0.2235 S22: 0.2165 S23: -0.2381 REMARK 3 S31: -0.5186 S32: -0.0030 S33: -0.4518 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.2348 7.9837 -7.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.2711 T22: 0.2125 REMARK 3 T33: 0.2455 T12: 0.0561 REMARK 3 T13: 0.0041 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 2.1483 L22: 1.2488 REMARK 3 L33: 1.8221 L12: 0.6561 REMARK 3 L13: -0.8571 L23: -0.4477 REMARK 3 S TENSOR REMARK 3 S11: 0.0927 S12: 0.1190 S13: 0.4715 REMARK 3 S21: -0.0123 S22: -0.0022 S23: 0.0990 REMARK 3 S31: -0.4464 S32: -0.3271 S33: -0.0686 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.5136 -4.5333 -8.8667 REMARK 3 T TENSOR REMARK 3 T11: 0.1881 T22: 0.2566 REMARK 3 T33: 0.1927 T12: -0.0134 REMARK 3 T13: -0.0112 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 1.8899 L22: 2.0603 REMARK 3 L33: 4.3314 L12: 0.1953 REMARK 3 L13: -0.0970 L23: 0.6910 REMARK 3 S TENSOR REMARK 3 S11: 0.0126 S12: 0.2182 S13: -0.1941 REMARK 3 S21: -0.0083 S22: 0.0577 S23: 0.2262 REMARK 3 S31: 0.0656 S32: -0.7085 S33: -0.0404 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5613 -5.3404 2.4155 REMARK 3 T TENSOR REMARK 3 T11: 0.1640 T22: 0.1258 REMARK 3 T33: 0.1969 T12: 0.0082 REMARK 3 T13: -0.0136 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.8589 L22: 2.0458 REMARK 3 L33: 1.8568 L12: 0.3864 REMARK 3 L13: -0.1078 L23: 0.0768 REMARK 3 S TENSOR REMARK 3 S11: 0.0012 S12: -0.1573 S13: -0.1242 REMARK 3 S21: 0.0600 S22: 0.1353 S23: -0.3527 REMARK 3 S31: -0.1099 S32: 0.1149 S33: -0.1705 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.4784 -6.5365 3.8304 REMARK 3 T TENSOR REMARK 3 T11: 0.1818 T22: 0.1867 REMARK 3 T33: 0.1391 T12: -0.0095 REMARK 3 T13: -0.0031 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.1361 L22: 1.3132 REMARK 3 L33: 3.5524 L12: 0.4273 REMARK 3 L13: 0.1151 L23: 0.2870 REMARK 3 S TENSOR REMARK 3 S11: 0.0594 S12: -0.2744 S13: -0.1606 REMARK 3 S21: 0.1374 S22: -0.1068 S23: 0.0657 REMARK 3 S31: -0.1414 S32: -0.3420 S33: 0.0602 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2415 0.2090 -0.3623 REMARK 3 T TENSOR REMARK 3 T11: 0.2110 T22: 0.2350 REMARK 3 T33: 0.2103 T12: 0.0227 REMARK 3 T13: -0.0219 T23: -0.0555 REMARK 3 L TENSOR REMARK 3 L11: 2.1819 L22: 2.7235 REMARK 3 L33: 0.9605 L12: 0.4267 REMARK 3 L13: -0.1614 L23: 0.6910 REMARK 3 S TENSOR REMARK 3 S11: 0.0287 S12: -0.2210 S13: 0.1348 REMARK 3 S21: 0.2879 S22: 0.1086 S23: -0.3000 REMARK 3 S31: -0.0171 S32: 0.2417 S33: -0.1574 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 175 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1620 5.4703 -5.3452 REMARK 3 T TENSOR REMARK 3 T11: 0.1873 T22: 0.2547 REMARK 3 T33: 0.2038 T12: -0.0388 REMARK 3 T13: 0.0353 T23: -0.0527 REMARK 3 L TENSOR REMARK 3 L11: 1.2706 L22: 2.2728 REMARK 3 L33: 3.1418 L12: 0.1274 REMARK 3 L13: 0.5220 L23: 1.0452 REMARK 3 S TENSOR REMARK 3 S11: 0.2570 S12: 0.0055 S13: 0.0698 REMARK 3 S21: -0.2300 S22: 0.1889 S23: -0.4312 REMARK 3 S31: -0.2440 S32: 0.4021 S33: -0.4038 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 190 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5099 -1.2675 -4.0257 REMARK 3 T TENSOR REMARK 3 T11: 0.2006 T22: 0.2849 REMARK 3 T33: 0.3325 T12: -0.0030 REMARK 3 T13: 0.0376 T23: -0.1069 REMARK 3 L TENSOR REMARK 3 L11: 1.8014 L22: 3.0040 REMARK 3 L33: 1.1938 L12: -0.2308 REMARK 3 L13: -0.1601 L23: -0.2885 REMARK 3 S TENSOR REMARK 3 S11: 0.0107 S12: -0.0953 S13: -0.2204 REMARK 3 S21: -0.2345 S22: 0.2317 S23: -0.9085 REMARK 3 S31: -0.0818 S32: 0.3245 S33: -0.2451 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.2159 -33.3218 2.5600 REMARK 3 T TENSOR REMARK 3 T11: 0.2317 T22: 0.2401 REMARK 3 T33: 0.3993 T12: 0.0302 REMARK 3 T13: 0.0294 T23: 0.0881 REMARK 3 L TENSOR REMARK 3 L11: 2.5838 L22: 2.8512 REMARK 3 L33: 0.7982 L12: -0.2326 REMARK 3 L13: 0.4284 L23: 0.6041 REMARK 3 S TENSOR REMARK 3 S11: -0.0734 S12: -0.0135 S13: -0.3833 REMARK 3 S21: 0.0417 S22: 0.1057 S23: -0.0190 REMARK 3 S31: 0.1184 S32: -0.0386 S33: 0.0150 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 35 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.0448 -30.1344 -8.9962 REMARK 3 T TENSOR REMARK 3 T11: 0.5529 T22: 0.5353 REMARK 3 T33: 0.4968 T12: 0.0599 REMARK 3 T13: -0.0693 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.1685 L22: 1.6244 REMARK 3 L33: 0.8114 L12: -0.0079 REMARK 3 L13: 0.3018 L23: -0.7032 REMARK 3 S TENSOR REMARK 3 S11: 0.2452 S12: 0.3915 S13: -0.1290 REMARK 3 S21: -0.7479 S22: -0.1008 S23: 0.2010 REMARK 3 S31: 0.0262 S32: 0.5178 S33: 0.0246 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.3735 -25.3589 1.7097 REMARK 3 T TENSOR REMARK 3 T11: 0.3037 T22: 0.3168 REMARK 3 T33: 0.6299 T12: 0.0140 REMARK 3 T13: -0.0289 T23: 0.1016 REMARK 3 L TENSOR REMARK 3 L11: 1.0503 L22: 2.4057 REMARK 3 L33: 1.0504 L12: -1.2138 REMARK 3 L13: -0.2157 L23: 1.4190 REMARK 3 S TENSOR REMARK 3 S11: 0.0351 S12: -0.0024 S13: -0.5408 REMARK 3 S21: -0.4203 S22: -0.0833 S23: 0.9866 REMARK 3 S31: 0.0412 S32: -0.0461 S33: 0.1053 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 86 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.9662 -18.3647 12.1737 REMARK 3 T TENSOR REMARK 3 T11: 0.2683 T22: 0.3860 REMARK 3 T33: 0.3541 T12: 0.0585 REMARK 3 T13: 0.0486 T23: 0.1326 REMARK 3 L TENSOR REMARK 3 L11: 1.6434 L22: 3.1465 REMARK 3 L33: 1.9478 L12: -0.7614 REMARK 3 L13: -0.7094 L23: 0.5756 REMARK 3 S TENSOR REMARK 3 S11: -0.1975 S12: -0.5771 S13: -0.5273 REMARK 3 S21: 0.3130 S22: 0.0787 S23: 0.3872 REMARK 3 S31: 0.0476 S32: 0.1284 S33: 0.1046 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 143 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.2915 -23.6878 12.3342 REMARK 3 T TENSOR REMARK 3 T11: 0.2691 T22: 0.3816 REMARK 3 T33: 0.3186 T12: 0.0622 REMARK 3 T13: -0.0079 T23: 0.1049 REMARK 3 L TENSOR REMARK 3 L11: 2.0046 L22: 2.8387 REMARK 3 L33: 1.6651 L12: 0.4523 REMARK 3 L13: -0.3923 L23: -0.1749 REMARK 3 S TENSOR REMARK 3 S11: -0.1605 S12: -0.5109 S13: -0.3747 REMARK 3 S21: 0.3329 S22: 0.0873 S23: -0.1701 REMARK 3 S31: 0.0160 S32: 0.5100 S33: 0.0963 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 191 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.3851 -24.5224 16.7251 REMARK 3 T TENSOR REMARK 3 T11: 0.3841 T22: 0.5316 REMARK 3 T33: 0.3507 T12: 0.1259 REMARK 3 T13: -0.1178 T23: 0.1349 REMARK 3 L TENSOR REMARK 3 L11: 2.2996 L22: 8.1351 REMARK 3 L33: 4.4772 L12: 1.4930 REMARK 3 L13: -0.6839 L23: 0.1415 REMARK 3 S TENSOR REMARK 3 S11: -0.0051 S12: -0.6312 S13: -0.5822 REMARK 3 S21: 0.8426 S22: -0.0321 S23: -0.8038 REMARK 3 S31: -0.1436 S32: 0.3480 S33: -0.0977 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ERD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1300022045. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 11C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97942 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 1.16_3549 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25824 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.502 REMARK 200 RESOLUTION RANGE LOW (A) : 47.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.09644 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44970 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1HE5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9-2.0M AMMONIUM SULFATE, 0.1M BIS REMARK 280 -TRIS (PH 6.5), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.91050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.49800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.91050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.49800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 507 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 562 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 570 O HOH A 596 2.10 REMARK 500 O PRO B 45 O HOH B 501 2.14 REMARK 500 O LEU A 189 O HOH A 501 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG1 THR A 164 OG1 THR A 164 2555 2.04 REMARK 500 O HOH A 600 O HOH B 586 4545 2.08 REMARK 500 O HOH A 612 O HOH B 576 2455 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 4 -33.00 -134.05 REMARK 500 ARG A 78 -140.21 56.45 REMARK 500 THR A 110 -103.83 -113.20 REMARK 500 PRO A 152 -151.04 -83.92 REMARK 500 THR B 110 -102.89 -113.11 REMARK 500 PRO B 152 -153.20 -82.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue JBO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue JBO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 403 DBREF 7ERD A 1 206 UNP P30043 BLVRB_HUMAN 1 206 DBREF 7ERD B 1 206 UNP P30043 BLVRB_HUMAN 1 206 SEQRES 1 A 206 MET ALA VAL LYS LYS ILE ALA ILE PHE GLY ALA THR GLY SEQRES 2 A 206 GLN THR GLY LEU THR THR LEU ALA GLN ALA VAL GLN ALA SEQRES 3 A 206 GLY TYR GLU VAL THR VAL LEU VAL ARG ASP SER SER ARG SEQRES 4 A 206 LEU PRO SER GLU GLY PRO ARG PRO ALA HIS VAL VAL VAL SEQRES 5 A 206 GLY ASP VAL LEU GLN ALA ALA ASP VAL ASP LYS THR VAL SEQRES 6 A 206 ALA GLY GLN ASP ALA VAL ILE VAL LEU LEU GLY THR ARG SEQRES 7 A 206 ASN ASP LEU SER PRO THR THR VAL MET SER GLU GLY ALA SEQRES 8 A 206 ARG ASN ILE VAL ALA ALA MET LYS ALA HIS GLY VAL ASP SEQRES 9 A 206 LYS VAL VAL ALA CYS THR SER ALA PHE LEU LEU TRP ASP SEQRES 10 A 206 PRO THR LYS VAL PRO PRO ARG LEU GLN ALA VAL THR ASP SEQRES 11 A 206 ASP HIS ILE ARG MET HIS LYS VAL LEU ARG GLU SER GLY SEQRES 12 A 206 LEU LYS TYR VAL ALA VAL MET PRO PRO HIS ILE GLY ASP SEQRES 13 A 206 GLN PRO LEU THR GLY ALA TYR THR VAL THR LEU ASP GLY SEQRES 14 A 206 ARG GLY PRO SER ARG VAL ILE SER LYS HIS ASP LEU GLY SEQRES 15 A 206 HIS PHE MET LEU ARG CYS LEU THR THR ASP GLU TYR ASP SEQRES 16 A 206 GLY HIS SER THR TYR PRO SER HIS GLN TYR GLN SEQRES 1 B 206 MET ALA VAL LYS LYS ILE ALA ILE PHE GLY ALA THR GLY SEQRES 2 B 206 GLN THR GLY LEU THR THR LEU ALA GLN ALA VAL GLN ALA SEQRES 3 B 206 GLY TYR GLU VAL THR VAL LEU VAL ARG ASP SER SER ARG SEQRES 4 B 206 LEU PRO SER GLU GLY PRO ARG PRO ALA HIS VAL VAL VAL SEQRES 5 B 206 GLY ASP VAL LEU GLN ALA ALA ASP VAL ASP LYS THR VAL SEQRES 6 B 206 ALA GLY GLN ASP ALA VAL ILE VAL LEU LEU GLY THR ARG SEQRES 7 B 206 ASN ASP LEU SER PRO THR THR VAL MET SER GLU GLY ALA SEQRES 8 B 206 ARG ASN ILE VAL ALA ALA MET LYS ALA HIS GLY VAL ASP SEQRES 9 B 206 LYS VAL VAL ALA CYS THR SER ALA PHE LEU LEU TRP ASP SEQRES 10 B 206 PRO THR LYS VAL PRO PRO ARG LEU GLN ALA VAL THR ASP SEQRES 11 B 206 ASP HIS ILE ARG MET HIS LYS VAL LEU ARG GLU SER GLY SEQRES 12 B 206 LEU LYS TYR VAL ALA VAL MET PRO PRO HIS ILE GLY ASP SEQRES 13 B 206 GLN PRO LEU THR GLY ALA TYR THR VAL THR LEU ASP GLY SEQRES 14 B 206 ARG GLY PRO SER ARG VAL ILE SER LYS HIS ASP LEU GLY SEQRES 15 B 206 HIS PHE MET LEU ARG CYS LEU THR THR ASP GLU TYR ASP SEQRES 16 B 206 GLY HIS SER THR TYR PRO SER HIS GLN TYR GLN HET NAP A 401 48 HET JBO A 402 21 HET SO4 A 403 5 HET NAP B 401 48 HET JBO B 402 21 HET SO4 B 403 5 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM JBO 2-[[2-METHYL-3-(TRIFLUOROMETHYL)PHENYL]AMINO]PYRIDINE- HETNAM 2 JBO 3-CARBOXYLIC ACID HETNAM SO4 SULFATE ION HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 4 JBO 2(C14 H11 F3 N2 O2) FORMUL 5 SO4 2(O4 S 2-) FORMUL 9 HOH *207(H2 O) HELIX 1 AA1 GLY A 13 ALA A 26 1 14 HELIX 2 AA2 GLN A 57 ALA A 66 1 10 HELIX 3 AA3 THR A 85 GLY A 102 1 18 HELIX 4 AA4 SER A 111 LEU A 115 5 5 HELIX 5 AA5 ASP A 117 VAL A 121 5 5 HELIX 6 AA6 PRO A 122 ARG A 124 5 3 HELIX 7 AA7 LEU A 125 GLU A 141 1 17 HELIX 8 AA8 LYS A 178 CYS A 188 1 11 HELIX 9 AA9 GLY B 13 ALA B 26 1 14 HELIX 10 AB1 ASP B 36 LEU B 40 5 5 HELIX 11 AB2 GLN B 57 ALA B 66 1 10 HELIX 12 AB3 THR B 85 GLY B 102 1 18 HELIX 13 AB4 SER B 111 LEU B 115 5 5 HELIX 14 AB5 ASP B 117 VAL B 121 5 5 HELIX 15 AB6 PRO B 122 ARG B 124 5 3 HELIX 16 AB7 LEU B 125 GLU B 141 1 17 HELIX 17 AB8 LYS B 178 CYS B 188 1 11 HELIX 18 AB9 LEU B 189 THR B 191 5 3 SHEET 1 AA1 8 HIS A 49 VAL A 52 0 SHEET 2 AA1 8 GLU A 29 VAL A 34 1 N VAL A 32 O VAL A 51 SHEET 3 AA1 8 LYS A 5 PHE A 9 1 N ILE A 6 O THR A 31 SHEET 4 AA1 8 ALA A 70 VAL A 73 1 O ILE A 72 N ALA A 7 SHEET 5 AA1 8 LYS A 105 CYS A 109 1 O VAL A 107 N VAL A 73 SHEET 6 AA1 8 LYS A 145 VAL A 149 1 O VAL A 149 N ALA A 108 SHEET 7 AA1 8 SER A 198 SER A 202 1 O THR A 199 N ALA A 148 SHEET 8 AA1 8 THR A 164 LEU A 167 -1 N THR A 166 O TYR A 200 SHEET 1 AA2 2 HIS A 153 GLY A 155 0 SHEET 2 AA2 2 VAL A 175 SER A 177 1 O ILE A 176 N GLY A 155 SHEET 1 AA3 8 HIS B 49 VAL B 52 0 SHEET 2 AA3 8 GLU B 29 VAL B 34 1 N VAL B 32 O VAL B 51 SHEET 3 AA3 8 LYS B 5 PHE B 9 1 N ILE B 8 O THR B 31 SHEET 4 AA3 8 ALA B 70 VAL B 73 1 O ILE B 72 N PHE B 9 SHEET 5 AA3 8 LYS B 105 CYS B 109 1 O VAL B 107 N VAL B 73 SHEET 6 AA3 8 LYS B 145 VAL B 149 1 O LYS B 145 N VAL B 106 SHEET 7 AA3 8 SER B 198 SER B 202 1 O THR B 199 N ALA B 148 SHEET 8 AA3 8 THR B 164 LEU B 167 -1 N THR B 164 O SER B 202 SHEET 1 AA4 2 HIS B 153 GLY B 155 0 SHEET 2 AA4 2 VAL B 175 SER B 177 1 O ILE B 176 N GLY B 155 SITE 1 AC1 34 GLY A 10 THR A 12 GLY A 13 GLN A 14 SITE 2 AC1 34 THR A 15 ARG A 35 SER A 38 ASP A 54 SITE 3 AC1 34 VAL A 55 LEU A 74 LEU A 75 GLY A 76 SITE 4 AC1 34 ARG A 78 VAL A 86 MET A 87 CYS A 109 SITE 5 AC1 34 THR A 110 HIS A 132 PRO A 151 PRO A 152 SITE 6 AC1 34 HIS A 153 ILE A 154 JBO A 402 HOH A 508 SITE 7 AC1 34 HOH A 511 HOH A 535 HOH A 537 HOH A 540 SITE 8 AC1 34 HOH A 552 HOH A 553 HOH A 570 HOH A 573 SITE 9 AC1 34 SER B 82 HOH B 508 SITE 1 AC2 10 ARG A 78 LEU A 81 SER A 111 PHE A 113 SITE 2 AC2 10 PRO A 151 PRO A 152 HIS A 153 NAP A 401 SITE 3 AC2 10 HOH A 511 HOH A 586 SITE 1 AC3 2 HIS A 183 LYS B 4 SITE 1 AC4 28 SER A 37 GLY B 10 THR B 12 GLY B 13 SITE 2 AC4 28 GLN B 14 THR B 15 ARG B 35 ARG B 39 SITE 3 AC4 28 ASP B 54 VAL B 55 LEU B 74 LEU B 75 SITE 4 AC4 28 GLY B 76 ARG B 78 CYS B 109 THR B 110 SITE 5 AC4 28 SER B 111 HIS B 132 PRO B 151 PRO B 152 SITE 6 AC4 28 HIS B 153 ILE B 154 JBO B 402 HOH B 519 SITE 7 AC4 28 HOH B 522 HOH B 523 HOH B 533 HOH B 546 SITE 1 AC5 11 ARG A 134 ALA B 112 PHE B 113 TRP B 116 SITE 2 AC5 11 LEU B 125 PRO B 152 HIS B 153 NAP B 401 SITE 3 AC5 11 HOH B 506 HOH B 519 HOH B 564 SITE 1 AC6 7 ARG A 140 HOH A 542 HIS B 153 GLY B 155 SITE 2 AC6 7 ASP B 156 GLN B 157 VAL B 175 CRYST1 81.821 116.996 41.615 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012222 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024030 0.00000