HEADER OXIDOREDUCTASE 06-MAY-21 7ERR TITLE TUNNEL-REDESIGNED O2-TOLERANT CO DEHYDROGENASE FOR REMOVAL OF CO IN TITLE 2 REAL FLUE GAS (AEROBIC CHCODH2 A559W MUTANT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBON MONOXIDE DEHYDROGENASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CODH 2; COMPND 5 EC: 1.2.7.4; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CARBOXYDOTHERMUS HYDROGENOFORMANS Z-2901; SOURCE 3 ORGANISM_TAXID: 246194; SOURCE 4 STRAIN: ATCC BAA-161 / DSM 6008 / Z-2901; SOURCE 5 GENE: COOS2, COOSII, CHY_0085; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CARBON MONOXIDE DEHYDROGENASE, ELECTRON TRANSPORT, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.Y.HEO,S.M.KIM REVDAT 3 29-NOV-23 7ERR 1 REMARK REVDAT 2 19-OCT-22 7ERR 1 JRNL REVDAT 1 05-OCT-22 7ERR 0 JRNL AUTH S.M.KIM,J.H.LEE,S.H.KANG,Y.Y.HEO,H.J.YOON,J.S.HAHN,H.H.LEE, JRNL AUTH 2 Y.H.KIM JRNL TITL O2-TOLERANT CO DEHYDROGENASE VIA TUNNEL REDESIGN FOR THE JRNL TITL 2 REMOVAL OF CO FROM INDUSTRIAL FLUE GAS JRNL REF NAT CATAL V. 5 807 2022 JRNL REFN ESSN 2520-1158 JRNL DOI 10.1038/S41929-022-00834-Y REMARK 2 REMARK 2 RESOLUTION. 2.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 25632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 1235 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.7200 - 4.7000 1.00 2778 144 0.1520 0.1939 REMARK 3 2 4.7000 - 3.7300 1.00 2728 132 0.1290 0.1739 REMARK 3 3 3.7300 - 3.2600 1.00 2709 167 0.1454 0.1849 REMARK 3 4 3.2600 - 2.9600 1.00 2730 133 0.1591 0.2088 REMARK 3 5 2.9600 - 2.7500 1.00 2730 123 0.1545 0.2239 REMARK 3 6 2.7500 - 2.5900 1.00 2700 132 0.1378 0.2036 REMARK 3 7 2.5900 - 2.4600 1.00 2752 121 0.1323 0.2326 REMARK 3 8 2.4600 - 2.3500 0.99 2667 142 0.1393 0.2149 REMARK 3 9 2.3500 - 2.2600 0.96 2603 141 0.1490 0.2194 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ERR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1300022013. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25635 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.260 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.51300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 1SU7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES/NAOH PH 7.0, 50 MM MGCL2, REMARK 280 25 % (W/V) POLYETHYLENEGLYCOL 3350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.07200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.56850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.07200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.56850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ARG A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 5 CG OD1 ND2 REMARK 470 LYS A 105 CD CE NZ REMARK 470 LYS A 111 NZ REMARK 470 GLU A 135 CG CD OE1 OE2 REMARK 470 LYS A 148 CE NZ REMARK 470 ASP A 158 CG OD1 OD2 REMARK 470 LYS A 250 NZ REMARK 470 SER A 266 OG REMARK 470 GLU A 354 CB CG CD OE1 OE2 REMARK 470 LYS A 376 CE NZ REMARK 470 ARG A 388 CD NE CZ NH1 NH2 REMARK 470 LYS A 390 CB CG CD CE NZ REMARK 470 ASP A 493 CG OD2 REMARK 470 LYS A 501 NZ REMARK 470 GLU A 509 OE1 OE2 REMARK 470 GLN A 594 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1000 O HOH A 1004 1.89 REMARK 500 OG SER A 94 O HOH A 801 2.00 REMARK 500 NZ LYS A 21 O HOH A 802 2.11 REMARK 500 OE1 GLU A 75 O HOH A 803 2.17 REMARK 500 O HOH A 967 O HOH A 979 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 841 O HOH A 934 2555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 201 -148.00 -120.22 REMARK 500 ASP A 202 122.98 -37.82 REMARK 500 ASN A 245 174.09 85.35 REMARK 500 CYS A 294 -150.46 55.49 REMARK 500 SER A 312 -128.54 47.58 REMARK 500 ASP A 330 -75.94 -100.16 REMARK 500 GLN A 332 124.28 79.45 REMARK 500 ASP A 454 -1.51 81.46 REMARK 500 MET A 560 -43.56 -139.93 REMARK 500 SER A 598 -58.55 -129.60 REMARK 500 GLU A 611 117.44 -160.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 702 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 39 SG REMARK 620 2 FES A 702 S1 126.9 REMARK 620 3 FES A 702 S2 101.5 103.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 702 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 47 SG REMARK 620 2 FES A 702 S1 132.4 REMARK 620 3 FES A 702 S2 113.3 103.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 701 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 48 SG REMARK 620 2 SF4 A 701 S1 117.2 REMARK 620 3 SF4 A 701 S3 115.1 104.5 REMARK 620 4 SF4 A 701 S4 110.6 105.5 102.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 701 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 51 SG REMARK 620 2 SF4 A 701 S1 116.8 REMARK 620 3 SF4 A 701 S2 102.5 104.0 REMARK 620 4 SF4 A 701 S3 123.5 103.6 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 701 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 56 SG REMARK 620 2 SF4 A 701 S1 116.8 REMARK 620 3 SF4 A 701 S2 119.2 104.9 REMARK 620 4 SF4 A 701 S4 107.2 104.5 102.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 701 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 70 SG REMARK 620 2 SF4 A 701 S2 103.3 REMARK 620 3 SF4 A 701 S3 118.3 103.4 REMARK 620 4 SF4 A 701 S4 122.5 102.6 104.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFS A 703 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 261 NE2 REMARK 620 2 NFS A 703 S1 71.6 REMARK 620 3 NFS A 703 S2 119.6 133.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFS A 703 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 333 SG REMARK 620 2 NFS A 703 S1 125.2 REMARK 620 3 NFS A 703 S3 103.0 128.5 REMARK 620 4 NFS A 703 S4 84.4 95.3 107.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFS A 703 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 446 SG REMARK 620 2 NFS A 703 S3 100.2 REMARK 620 3 NFS A 703 S4 113.1 104.3 REMARK 620 4 NFS A 703 S5 128.3 99.0 107.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFS A 703 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 476 SG REMARK 620 2 NFS A 703 S1 116.9 REMARK 620 3 NFS A 703 S4 124.6 100.0 REMARK 620 4 NFS A 703 S5 103.6 99.5 109.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NFS A 703 NI1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 526 SG REMARK 620 2 NFS A 703 S2 62.3 REMARK 620 3 NFS A 703 S3 136.5 80.3 REMARK 620 4 NFS A 703 S5 124.1 161.9 98.4 REMARK 620 N 1 2 3 DBREF 7ERR A 4 636 UNP Q9F8A8 COOS2_CARHZ 4 636 SEQADV 7ERR MET A -19 UNP Q9F8A8 INITIATING METHIONINE SEQADV 7ERR GLY A -18 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR SER A -17 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR SER A -16 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR HIS A -15 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR HIS A -14 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR HIS A -13 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR HIS A -12 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR HIS A -11 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR HIS A -10 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR SER A -9 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR SER A -8 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR GLY A -7 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR LEU A -6 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR VAL A -5 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR PRO A -4 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR ARG A -3 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR GLY A -2 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR SER A -1 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR HIS A 0 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR MET A 1 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR ALA A 2 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR ARG A 3 UNP Q9F8A8 EXPRESSION TAG SEQADV 7ERR TRP A 559 UNP Q9F8A8 ALA 559 ENGINEERED MUTATION SEQRES 1 A 656 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 656 LEU VAL PRO ARG GLY SER HIS MET ALA ARG GLN ASN LEU SEQRES 3 A 656 LYS SER THR ASP ARG ALA VAL GLN GLN MET LEU ASP LYS SEQRES 4 A 656 ALA LYS ARG GLU GLY ILE GLN THR VAL TRP ASP ARG TYR SEQRES 5 A 656 GLU ALA MET LYS PRO GLN CYS GLY PHE GLY GLU THR GLY SEQRES 6 A 656 LEU CYS CYS ARG HIS CYS LEU GLN GLY PRO CYS ARG ILE SEQRES 7 A 656 ASN PRO PHE GLY ASP GLU PRO LYS VAL GLY ILE CYS GLY SEQRES 8 A 656 ALA THR ALA GLU VAL ILE VAL ALA ARG GLY LEU ASP ARG SEQRES 9 A 656 SER ILE ALA ALA GLY ALA ALA GLY HIS SER GLY HIS ALA SEQRES 10 A 656 LYS HIS LEU ALA HIS THR LEU LYS LYS ALA VAL GLN GLY SEQRES 11 A 656 LYS ALA ALA SER TYR MET ILE LYS ASP ARG THR LYS LEU SEQRES 12 A 656 HIS SER ILE ALA LYS ARG LEU GLY ILE PRO THR GLU GLY SEQRES 13 A 656 GLN LYS ASP GLU ASP ILE ALA LEU GLU VAL ALA LYS ALA SEQRES 14 A 656 ALA LEU ALA ASP PHE HIS GLU LYS ASP THR PRO VAL LEU SEQRES 15 A 656 TRP VAL THR THR VAL LEU PRO PRO SER ARG VAL LYS VAL SEQRES 16 A 656 LEU SER ALA HIS GLY LEU ILE PRO ALA GLY ILE ASP HIS SEQRES 17 A 656 GLU ILE ALA GLU ILE MET HIS ARG THR SER MET GLY CYS SEQRES 18 A 656 ASP ALA ASP ALA GLN ASN LEU LEU LEU GLY GLY LEU ARG SEQRES 19 A 656 CYS SER LEU ALA ASP LEU ALA GLY CYS TYR MET GLY THR SEQRES 20 A 656 ASP LEU ALA ASP ILE LEU PHE GLY THR PRO ALA PRO VAL SEQRES 21 A 656 VAL THR GLU SER ASN LEU GLY VAL LEU LYS ALA ASP ALA SEQRES 22 A 656 VAL ASN VAL ALA VAL HIS GLY HIS ASN PRO VAL LEU SER SEQRES 23 A 656 ASP ILE ILE VAL SER VAL SER LYS GLU MET GLU ASN GLU SEQRES 24 A 656 ALA ARG ALA ALA GLY ALA THR GLY ILE ASN VAL VAL GLY SEQRES 25 A 656 ILE CYS CYS THR GLY ASN GLU VAL LEU MET ARG HIS GLY SEQRES 26 A 656 ILE PRO ALA CYS THR HIS SER VAL SER GLN GLU MET ALA SEQRES 27 A 656 MET ILE THR GLY ALA LEU ASP ALA MET ILE LEU ASP TYR SEQRES 28 A 656 GLN CYS ILE GLN PRO SER VAL ALA THR ILE ALA GLU CYS SEQRES 29 A 656 THR GLY THR THR VAL ILE THR THR MET GLU MET SER LYS SEQRES 30 A 656 ILE THR GLY ALA THR HIS VAL ASN PHE ALA GLU GLU ALA SEQRES 31 A 656 ALA VAL GLU ASN ALA LYS GLN ILE LEU ARG LEU ALA ILE SEQRES 32 A 656 ASP THR PHE LYS ARG ARG LYS GLY LYS PRO VAL GLU ILE SEQRES 33 A 656 PRO ASN ILE LYS THR LYS VAL VAL ALA GLY PHE SER THR SEQRES 34 A 656 GLU ALA ILE ILE ASN ALA LEU SER LYS LEU ASN ALA ASN SEQRES 35 A 656 ASP PRO LEU LYS PRO LEU ILE ASP ASN VAL VAL ASN GLY SEQRES 36 A 656 ASN ILE ARG GLY VAL CYS LEU PHE ALA GLY CYS ASN ASN SEQRES 37 A 656 VAL LYS VAL PRO GLN ASP GLN ASN PHE THR THR ILE ALA SEQRES 38 A 656 ARG LYS LEU LEU LYS GLN ASN VAL LEU VAL VAL ALA THR SEQRES 39 A 656 GLY CYS GLY ALA GLY ALA LEU MET ARG HIS GLY PHE MET SEQRES 40 A 656 ASP PRO ALA ASN VAL ASP GLU LEU CYS GLY ASP GLY LEU SEQRES 41 A 656 LYS ALA VAL LEU THR ALA ILE GLY GLU ALA ASN GLY LEU SEQRES 42 A 656 GLY GLY PRO LEU PRO PRO VAL LEU HIS MET GLY SER CYS SEQRES 43 A 656 VAL ASP ASN SER ARG ALA VAL ALA LEU VAL ALA ALA LEU SEQRES 44 A 656 ALA ASN ARG LEU GLY VAL ASP LEU ASP ARG LEU PRO VAL SEQRES 45 A 656 VAL ALA SER ALA ALA GLU TRP MET HIS GLU LYS ALA VAL SEQRES 46 A 656 ALA ILE GLY THR TRP ALA VAL THR ILE GLY LEU PRO THR SEQRES 47 A 656 HIS ILE GLY VAL LEU PRO PRO ILE THR GLY SER LEU PRO SEQRES 48 A 656 VAL THR GLN ILE LEU THR SER SER VAL LYS ASP ILE THR SEQRES 49 A 656 GLY GLY TYR PHE ILE VAL GLU LEU ASP PRO GLU THR ALA SEQRES 50 A 656 ALA ASP LYS LEU LEU ALA ALA ILE ASN GLU ARG ARG ALA SEQRES 51 A 656 GLY LEU GLY LEU PRO TRP HET SF4 A 701 8 HET FES A 702 4 HET NFS A 703 10 HETNAM SF4 IRON/SULFUR CLUSTER HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM NFS FE(4)-NI(1)-S(5) CLUSTER FORMUL 2 SF4 FE4 S4 FORMUL 3 FES FE2 S2 FORMUL 4 NFS FE4 NI S5 FORMUL 5 HOH *226(H2 O) HELIX 1 AA1 ASP A 10 GLY A 24 1 15 HELIX 2 AA2 THR A 27 ALA A 34 1 8 HELIX 3 AA3 CYS A 39 GLY A 45 1 7 HELIX 4 AA4 THR A 73 GLN A 109 1 37 HELIX 5 AA5 ASP A 119 LEU A 130 1 12 HELIX 6 AA6 LYS A 138 ASP A 153 1 16 HELIX 7 AA7 VAL A 161 THR A 166 1 6 HELIX 8 AA8 PRO A 169 HIS A 179 1 11 HELIX 9 AA9 GLY A 185 THR A 197 1 13 HELIX 10 AB1 ASP A 204 GLY A 235 1 32 HELIX 11 AB2 ASN A 245 LEU A 249 5 5 HELIX 12 AB3 ASN A 262 MET A 276 1 15 HELIX 13 AB4 MET A 276 ALA A 283 1 8 HELIX 14 AB5 CYS A 294 GLY A 305 1 12 HELIX 15 AB6 HIS A 311 SER A 314 5 4 HELIX 16 AB7 GLN A 315 THR A 321 1 7 HELIX 17 AB8 PRO A 336 GLY A 346 1 11 HELIX 18 AB9 ALA A 367 GLU A 369 5 3 HELIX 19 AC1 ALA A 370 LYS A 390 1 21 HELIX 20 AC2 SER A 408 LYS A 418 1 11 HELIX 21 AC3 PRO A 424 ASN A 434 1 11 HELIX 22 AC4 ASP A 454 GLN A 467 1 14 HELIX 23 AC5 GLY A 475 HIS A 484 1 10 HELIX 24 AC6 ASP A 488 ALA A 490 5 3 HELIX 25 AC7 ASN A 491 CYS A 496 1 6 HELIX 26 AC8 GLY A 497 ASN A 511 1 15 HELIX 27 AC9 ASP A 528 GLY A 544 1 17 HELIX 28 AD1 ASP A 546 LEU A 550 5 5 HELIX 29 AD2 HIS A 561 ILE A 574 1 14 HELIX 30 AD3 SER A 589 SER A 598 1 10 HELIX 31 AD4 VAL A 600 GLY A 605 1 6 HELIX 32 AD5 ASP A 613 LEU A 632 1 20 SHEET 1 AA1 2 CYS A 47 CYS A 48 0 SHEET 2 AA1 2 CYS A 56 ARG A 57 -1 O CYS A 56 N CYS A 48 SHEET 1 AA2 2 VAL A 240 SER A 244 0 SHEET 2 AA2 2 THR A 401 ALA A 405 -1 O VAL A 403 N THR A 242 SHEET 1 AA3 6 ALA A 308 THR A 310 0 SHEET 2 AA3 6 ILE A 288 ILE A 293 1 N GLY A 292 O CYS A 309 SHEET 3 AA3 6 VAL A 254 HIS A 259 1 N VAL A 254 O ASN A 289 SHEET 4 AA3 6 LEU A 324 LEU A 329 1 O ILE A 328 N ALA A 257 SHEET 5 AA3 6 THR A 348 THR A 351 1 O ILE A 350 N LEU A 329 SHEET 6 AA3 6 THR A 362 HIS A 363 1 O THR A 362 N THR A 351 SHEET 1 AA4 6 LEU A 521 GLY A 524 0 SHEET 2 AA4 6 VAL A 469 THR A 474 1 N ALA A 473 O MET A 523 SHEET 3 AA4 6 GLY A 439 PHE A 443 1 N GLY A 439 O LEU A 470 SHEET 4 AA4 6 VAL A 552 ALA A 556 1 O SER A 555 N LEU A 442 SHEET 5 AA4 6 PRO A 577 ILE A 580 1 O HIS A 579 N ALA A 556 SHEET 6 AA4 6 TYR A 607 VAL A 610 1 O TYR A 607 N THR A 578 LINK SG CYS A 39 FE2 FES A 702 1555 1555 2.32 LINK SG CYS A 47 FE1 FES A 702 1555 1555 2.23 LINK SG CYS A 48 FE2 SF4 A 701 1555 1555 2.27 LINK SG CYS A 51 FE4 SF4 A 701 1555 1555 2.34 LINK SG CYS A 56 FE3 SF4 A 701 1555 1555 2.27 LINK SG CYS A 70 FE1 SF4 A 701 1555 1555 2.27 LINK NE2 HIS A 261 FE1 NFS A 703 1555 1555 1.94 LINK SG CYS A 333 FE4 NFS A 703 1555 1555 2.24 LINK SG CYS A 446 FE3 NFS A 703 1555 1555 2.43 LINK SG CYS A 476 FE2 NFS A 703 1555 1555 2.30 LINK SG CYS A 526 NI1 NFS A 703 1555 1555 1.98 CISPEP 1 LYS A 36 PRO A 37 0 -5.70 CISPEP 2 GLY A 54 PRO A 55 0 1.69 CISPEP 3 GLU A 64 PRO A 65 0 0.64 CRYST1 112.144 75.137 70.785 90.00 111.20 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008917 0.000000 0.003459 0.00000 SCALE2 0.000000 0.013309 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015153 0.00000