HEADER HYDROLASE 19-MAY-21 7EUX TITLE CRYSTAL STRUCTURE OF THE LON-LIKE PROTEASE MTALONC WITH D581A MUTATION TITLE 2 IN COMPLEX WITH SUBSTRATE POLYPEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOPEPTIDASE LA; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.21.53; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ALA-PRO-GLU-ALA-VAL; COMPND 9 CHAIN: S; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: B19, A KNOWN PEPTIDE SUBSTRATE OF LON DERIVED FROM AN COMPND 12 INTERNAL SEGMENT OF BETA-GALACTOSIDASE, AND F-B20-Q. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MEIOTHERMUS TAIWANENSIS; SOURCE 3 ORGANISM_TAXID: 172827; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 9 ORGANISM_TAXID: 562 KEYWDS HYDROLASE, PROTEASE, TTC1975 PEPTIDASE, LON-LIKE PROTEASE EXPDTA X-RAY DIFFRACTION AUTHOR K.Y.HSIEH,C.I.KUO,S.C.SU,K.F.HUANG,C.I.CHANG REVDAT 2 29-NOV-23 7EUX 1 REMARK REVDAT 1 24-NOV-21 7EUX 0 JRNL AUTH S.LI,K.Y.HSIEH,C.I.KUO,S.C.SU,K.F.HUANG,K.ZHANG,C.I.CHANG JRNL TITL PROCESSIVE CLEAVAGE OF SUBSTRATE AT INDIVIDUAL PROTEOLYTIC JRNL TITL 2 ACTIVE SITES OF THE LON PROTEASE COMPLEX. JRNL REF SCI ADV V. 7 J9537 2021 JRNL REFN ESSN 2375-2548 JRNL PMID 34757797 JRNL DOI 10.1126/SCIADV.ABJ9537 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.5 REMARK 3 NUMBER OF REFLECTIONS : 41112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2255 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1662 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 48.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE SET COUNT : 105 REMARK 3 BIN FREE R VALUE : 0.2770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4542 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 257 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.73000 REMARK 3 B22 (A**2) : -0.73000 REMARK 3 B33 (A**2) : 1.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.036 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.033 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.841 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4637 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4500 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6299 ; 1.454 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10312 ; 0.797 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 585 ; 6.683 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 207 ;36.199 ;22.850 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 742 ;17.696 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;19.151 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 710 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5266 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1048 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.512 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.488 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7EUX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1300022280. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER SMART 6500 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48531 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.59200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4FW9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% ISOPROPANOL, 100 MM MONOSODIUM REMARK 280 PHOSPHATE, 100 MM SODIUM CITRATE AT PH 4.6., VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1099 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 109 REMARK 465 LEU A 110 REMARK 465 GLU A 111 REMARK 465 VAL A 112 REMARK 465 ASN A 113 REMARK 465 ARG A 114 REMARK 465 LEU A 115 REMARK 465 ASP A 116 REMARK 465 GLU A 117 REMARK 465 LEU A 118 REMARK 465 PHE A 119 REMARK 465 ARG A 120 REMARK 465 GLN A 121 REMARK 465 GLY A 122 REMARK 465 SER A 123 REMARK 465 PHE A 124 REMARK 465 LEU A 125 REMARK 465 ARG A 126 REMARK 465 GLU A 127 REMARK 465 LYS A 128 REMARK 465 THR A 129 REMARK 465 GLN A 130 REMARK 465 LEU A 131 REMARK 465 GLU A 132 REMARK 465 ALA A 133 REMARK 465 ARG A 134 REMARK 465 PHE A 135 REMARK 465 LYS A 136 REMARK 465 GLU A 137 REMARK 465 ALA A 138 REMARK 465 ARG A 139 REMARK 465 GLU A 140 REMARK 465 GLN A 141 REMARK 465 GLN A 142 REMARK 465 LEU A 143 REMARK 465 GLU A 144 REMARK 465 ALA A 145 REMARK 465 LEU A 146 REMARK 465 ARG A 147 REMARK 465 ARG A 148 REMARK 465 GLU A 149 REMARK 465 ALA A 150 REMARK 465 GLN A 151 REMARK 465 GLU A 152 REMARK 465 ALA A 153 REMARK 465 GLY A 154 REMARK 465 PHE A 155 REMARK 465 ALA A 156 REMARK 465 LEU A 157 REMARK 465 SER A 158 REMARK 465 THR A 159 REMARK 465 ASN A 160 REMARK 465 GLY A 161 REMARK 465 GLU A 162 REMARK 465 ARG A 163 REMARK 465 LEU A 164 REMARK 465 GLU A 165 REMARK 465 LEU A 166 REMARK 465 THR A 167 REMARK 465 GLY A 168 REMARK 465 PRO A 169 REMARK 465 GLY A 170 REMARK 465 PRO A 171 REMARK 465 VAL A 172 REMARK 465 PRO A 173 REMARK 465 ALA A 174 REMARK 465 GLU A 175 REMARK 465 LEU A 176 REMARK 465 SER A 177 REMARK 465 ALA A 178 REMARK 465 ARG A 179 REMARK 465 LEU A 180 REMARK 465 GLU A 181 REMARK 465 GLU A 182 REMARK 465 VAL A 183 REMARK 465 THR A 184 REMARK 465 LEU A 185 REMARK 465 GLY A 186 REMARK 465 SER A 187 REMARK 465 LEU A 188 REMARK 465 ALA A 189 REMARK 465 ALA A 190 REMARK 465 SER A 191 REMARK 465 ALA A 192 REMARK 465 GLU A 193 REMARK 465 LEU A 194 REMARK 465 GLU A 195 REMARK 465 VAL A 196 REMARK 465 ALA A 197 REMARK 465 LEU A 198 REMARK 465 ARG A 199 REMARK 465 ARG A 200 REMARK 465 LEU A 201 REMARK 465 ARG A 202 REMARK 465 ARG A 203 REMARK 465 ASP A 204 REMARK 465 TRP A 205 REMARK 465 ALA A 206 REMARK 465 LEU A 207 REMARK 465 HIS A 208 REMARK 465 TYR A 209 REMARK 465 LEU A 210 REMARK 465 ASN A 211 REMARK 465 ASN A 212 REMARK 465 ARG A 213 REMARK 465 PHE A 214 REMARK 465 GLU A 215 REMARK 465 PRO A 216 REMARK 465 LEU A 217 REMARK 465 PHE A 218 REMARK 465 GLN A 219 REMARK 465 ALA A 233 REMARK 465 ARG A 234 REMARK 465 LEU A 235 REMARK 465 ALA A 236 REMARK 465 LEU A 245 REMARK 465 ASP A 246 REMARK 465 PRO A 247 REMARK 465 ALA A 248 REMARK 465 ASP A 286 REMARK 465 ARG A 287 REMARK 465 GLY A 288 REMARK 465 VAL A 289 REMARK 465 GLN A 342 REMARK 465 ALA A 343 REMARK 465 HIS A 713 REMARK 465 ASP A 714 REMARK 465 LYS A 715 REMARK 465 GLU A 716 REMARK 465 ASP A 717 REMARK 465 ARG A 718 REMARK 465 GLU A 719 REMARK 465 LYS A 720 REMARK 465 LEU A 721 REMARK 465 ALA A 722 REMARK 465 ALA A 723 REMARK 465 ALA A 724 REMARK 465 LEU A 725 REMARK 465 GLU A 726 REMARK 465 HIS A 727 REMARK 465 HIS A 728 REMARK 465 HIS A 729 REMARK 465 HIS A 730 REMARK 465 HIS A 731 REMARK 465 HIS A 732 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 582 C VAL S 19 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 425 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 432 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 631 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 94 155.73 -49.87 REMARK 500 ALA A 224 33.41 -88.69 REMARK 500 LEU A 231 4.78 -65.42 REMARK 500 THR A 241 15.43 -155.45 REMARK 500 SER A 257 148.23 -170.36 REMARK 500 ALA A 345 142.27 -174.87 REMARK 500 TYR A 510 60.65 69.66 REMARK 500 ARG A 525 66.70 -107.24 REMARK 500 GLU A 690 -158.91 -120.28 REMARK 500 PHE A 692 87.64 -36.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 692 ARG A 693 53.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH S 105 DISTANCE = 5.82 ANGSTROMS DBREF 7EUX A 1 719 UNP C9DRU9 C9DRU9_9DEIN 1 719 DBREF 7EUX S 15 19 PDB 7EUX 7EUX 15 19 SEQADV 7EUX ALA A 581 UNP C9DRU9 ASP 581 ENGINEERED MUTATION SEQADV 7EUX LYS A 720 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX LEU A 721 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX ALA A 722 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX ALA A 723 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX ALA A 724 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX LEU A 725 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX GLU A 726 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX HIS A 727 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX HIS A 728 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX HIS A 729 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX HIS A 730 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX HIS A 731 UNP C9DRU9 EXPRESSION TAG SEQADV 7EUX HIS A 732 UNP C9DRU9 EXPRESSION TAG SEQRES 1 A 732 MET ARG LEU SER TYR GLU ALA LEU GLU TRP ARG THR PRO SEQRES 2 A 732 ILE GLU ASN SER THR GLU PRO VAL SER LEU PRO PRO PRO SEQRES 3 A 732 PRO PRO PHE PHE GLY GLN GLU ARG ALA ARG GLU ALA LEU SEQRES 4 A 732 GLU LEU ALA ILE ARG GLY GLY PHE HIS ALA TYR LEU VAL SEQRES 5 A 732 GLY PRO PRO SER LEU GLY LYS HIS GLU ALA LEU LEU ALA SEQRES 6 A 732 TYR LEU SER THR GLN SER VAL GLU THR PRO PRO ASP LEU SEQRES 7 A 732 LEU TYR VAL PRO LEU SER GLU ARG LYS VAL ALA VAL LEU SEQRES 8 A 732 THR LEU PRO SER GLY GLN GLU ILE HIS LEU ALA GLU ALA SEQRES 9 A 732 VAL GLU GLY LEU LEU LEU GLU VAL ASN ARG LEU ASP GLU SEQRES 10 A 732 LEU PHE ARG GLN GLY SER PHE LEU ARG GLU LYS THR GLN SEQRES 11 A 732 LEU GLU ALA ARG PHE LYS GLU ALA ARG GLU GLN GLN LEU SEQRES 12 A 732 GLU ALA LEU ARG ARG GLU ALA GLN GLU ALA GLY PHE ALA SEQRES 13 A 732 LEU SER THR ASN GLY GLU ARG LEU GLU LEU THR GLY PRO SEQRES 14 A 732 GLY PRO VAL PRO ALA GLU LEU SER ALA ARG LEU GLU GLU SEQRES 15 A 732 VAL THR LEU GLY SER LEU ALA ALA SER ALA GLU LEU GLU SEQRES 16 A 732 VAL ALA LEU ARG ARG LEU ARG ARG ASP TRP ALA LEU HIS SEQRES 17 A 732 TYR LEU ASN ASN ARG PHE GLU PRO LEU PHE GLN ARG PHE SEQRES 18 A 732 PRO GLN ALA ARG ALA TYR LEU GLU ALA LEU ARG ALA ARG SEQRES 19 A 732 LEU ALA ARG TYR ALA GLU THR GLY GLU PRO LEU ASP PRO SEQRES 20 A 732 ALA GLN TRP ARG PRO ASN LEU LEU THR SER SER SER SER SEQRES 21 A 732 GLY THR PRO PRO PRO ILE VAL TYR GLU PRO TYR ALA THR SEQRES 22 A 732 ALA PRO ARG LEU PHE GLY ARG LEU ASP TYR LEU VAL ASP SEQRES 23 A 732 ARG GLY VAL TRP SER THR ASN VAL SER LEU ILE ARG PRO SEQRES 24 A 732 GLY ALA VAL HIS ARG ALA GLN GLY GLY TYR LEU ILE LEU SEQRES 25 A 732 ASP ALA LEU SER LEU LYS ARG GLU GLY THR TRP GLU ALA SEQRES 26 A 732 PHE LYS ARG ALA LEU ARG ASN GLY GLN VAL GLU PRO VAL SEQRES 27 A 732 THR GLU PRO GLN ALA PRO ALA GLY LEU GLU VAL GLU PRO SEQRES 28 A 732 PHE PRO ILE GLN MET GLN VAL ILE LEU VAL GLY THR PRO SEQRES 29 A 732 GLU ALA PHE GLU GLY LEU GLU GLU ASP PRO ALA PHE SER SEQRES 30 A 732 GLU LEU PHE ARG ILE ARG ALA GLU PHE SER PRO THR LEU SEQRES 31 A 732 PRO ALA SER PRO GLU ASN CYS THR ALA LEU GLY GLY TRP SEQRES 32 A 732 LEU LEU ALA GLN GLY PHE GLN LEU THR GLN GLY GLY LEU SEQRES 33 A 732 THR ARG LEU TYR ASP GLU ALA ARG ARG MET ALA GLU GLN SEQRES 34 A 732 ARG ASP ARG MET ASP ALA ARG LEU VAL GLU ILE ARG ALA SEQRES 35 A 732 LEU ALA GLU GLU ALA ALA VAL LEU GLY GLY GLY LEU LEU SEQRES 36 A 732 THR ALA GLU SER VAL GLU GLN ALA ILE ALA ALA ARG GLU SEQRES 37 A 732 HIS ARG SER PHE LEU SER GLU GLU GLU PHE LEU ARG ALA SEQRES 38 A 732 VAL GLN GLU GLY VAL ILE ARG LEU ARG THR THR GLY ARG SEQRES 39 A 732 ALA VAL GLY GLU VAL ASN SER LEU VAL VAL VAL GLU ALA SEQRES 40 A 732 ALA PRO TYR TRP GLY ARG PRO ALA ARG LEU THR ALA ARG SEQRES 41 A 732 ALA ALA PRO GLY ARG ASP HIS LEU ILE SER ILE ASP ARG SEQRES 42 A 732 GLU ALA GLY LEU GLY GLY GLN ILE PHE HIS LYS ALA VAL SEQRES 43 A 732 LEU THR LEU ALA GLY TYR LEU ARG SER ARG TYR ILE GLU SEQRES 44 A 732 HIS GLY SER LEU PRO VAL THR ILE SER LEU ALA PHE GLU SEQRES 45 A 732 GLN ASN TYR VAL SER ILE GLU GLY ALA SER ALA GLY LEU SEQRES 46 A 732 ALA GLU LEU VAL ALA ALA LEU SER ALA ILE GLY ASN LEU SEQRES 47 A 732 PRO LEU ARG GLN ASP LEU ALA VAL THR GLY ALA VAL ASP SEQRES 48 A 732 GLN THR GLY LYS VAL LEU ALA VAL GLY ALA ILE ASN ALA SEQRES 49 A 732 LYS VAL GLU GLY PHE PHE ARG VAL CYS LYS ALA LEU GLY SEQRES 50 A 732 LEU SER GLY THR GLN GLY VAL ILE LEU PRO GLU ALA ASN SEQRES 51 A 732 LEU ALA ASN LEU THR LEU ARG ALA GLU VAL LEU GLU ALA SEQRES 52 A 732 VAL ARG ALA GLY GLN PHE HIS ILE TYR ALA VAL GLU THR SEQRES 53 A 732 ALA GLU GLN ALA LEU GLU ILE LEU ALA GLY ALA ARG MET SEQRES 54 A 732 GLU GLY PHE ARG GLY LEU GLN GLU LYS ILE ARG ALA GLY SEQRES 55 A 732 LEU GLU ALA PHE ALA ARG LEU GLU GLU GLY HIS ASP LYS SEQRES 56 A 732 GLU ASP ARG GLU LYS LEU ALA ALA ALA LEU GLU HIS HIS SEQRES 57 A 732 HIS HIS HIS HIS SEQRES 1 S 5 ALA PRO GLU ALA VAL HET PO4 A 801 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 O4 P 3- FORMUL 4 HOH *257(H2 O) HELIX 1 AA1 SER A 4 GLU A 9 1 6 HELIX 2 AA2 GLN A 32 GLY A 46 1 15 HELIX 3 AA3 GLY A 58 THR A 69 1 12 HELIX 4 AA4 GLN A 97 LEU A 108 1 12 HELIX 5 AA5 PHE A 221 GLN A 223 5 3 HELIX 6 AA6 ALA A 224 LEU A 231 1 8 HELIX 7 AA7 THR A 273 GLY A 279 1 7 HELIX 8 AA8 ASN A 293 SER A 295 5 3 HELIX 9 AA9 GLY A 300 ALA A 305 1 6 HELIX 10 AB1 ALA A 314 GLU A 320 1 7 HELIX 11 AB2 THR A 322 GLY A 333 1 12 HELIX 12 AB3 PRO A 364 ALA A 366 5 3 HELIX 13 AB4 PHE A 367 GLU A 372 1 6 HELIX 14 AB5 ASP A 373 LEU A 379 1 7 HELIX 15 AB6 SER A 393 GLN A 407 1 15 HELIX 16 AB7 THR A 412 GLU A 428 1 17 HELIX 17 AB8 ARG A 436 GLY A 451 1 16 HELIX 18 AB9 THR A 456 SER A 471 1 16 HELIX 19 AC1 PHE A 472 GLU A 484 1 13 HELIX 20 AC2 ILE A 531 ALA A 535 1 5 HELIX 21 AC3 GLY A 539 TYR A 557 1 19 HELIX 22 AC4 ALA A 583 ASN A 597 1 15 HELIX 23 AC5 ALA A 621 LEU A 636 1 16 HELIX 24 AC6 ALA A 649 LEU A 654 5 6 HELIX 25 AC7 ARG A 657 ALA A 666 1 10 HELIX 26 AC8 THR A 676 GLY A 686 1 11 HELIX 27 AC9 GLY A 694 GLY A 712 1 19 SHEET 1 AA1 5 ILE A 266 TYR A 268 0 SHEET 2 AA1 5 TYR A 309 ASP A 313 1 O ILE A 311 N VAL A 267 SHEET 3 AA1 5 GLN A 357 GLY A 362 1 O GLN A 357 N LEU A 310 SHEET 4 AA1 5 HIS A 48 VAL A 52 1 N LEU A 51 O LEU A 360 SHEET 5 AA1 5 PHE A 380 GLU A 385 1 O ALA A 384 N TYR A 50 SHEET 1 AA2 4 ASN A 253 THR A 256 0 SHEET 2 AA2 4 ASP A 77 PRO A 82 -1 N LEU A 78 O LEU A 255 SHEET 3 AA2 4 LYS A 87 LEU A 93 -1 O LEU A 91 N LEU A 79 SHEET 4 AA2 4 GLU A 348 VAL A 349 1 O GLU A 348 N VAL A 88 SHEET 1 AA3 2 ARG A 280 LEU A 281 0 SHEET 2 AA3 2 ILE A 297 ARG A 298 -1 O ARG A 298 N ARG A 280 SHEET 1 AA4 2 THR A 389 PRO A 391 0 SHEET 2 AA4 2 ARG A 432 ASP A 434 -1 O MET A 433 N LEU A 390 SHEET 1 AA5 2 GLN A 410 LEU A 411 0 SHEET 2 AA5 2 LEU A 454 LEU A 455 1 O LEU A 455 N GLN A 410 SHEET 1 AA6 2 ARG A 494 VAL A 496 0 SHEET 2 AA6 2 PRO A 599 ARG A 601 -1 O LEU A 600 N ALA A 495 SHEET 1 AA7 6 HIS A 527 SER A 530 0 SHEET 2 AA7 6 VAL A 565 PHE A 571 1 O ILE A 567 N ILE A 529 SHEET 3 AA7 6 GLY A 512 PRO A 523 -1 N ALA A 522 O THR A 566 SHEET 4 AA7 6 GLU A 498 VAL A 505 -1 N SER A 501 O ALA A 515 SHEET 5 AA7 6 GLU S 17 ALA S 18 -1 O ALA S 18 N VAL A 504 SHEET 6 AA7 6 ILE A 578 GLU A 579 1 N GLU A 579 O GLU S 17 SHEET 1 AA8 7 HIS A 527 SER A 530 0 SHEET 2 AA8 7 VAL A 565 PHE A 571 1 O ILE A 567 N ILE A 529 SHEET 3 AA8 7 GLY A 512 PRO A 523 -1 N ALA A 522 O THR A 566 SHEET 4 AA8 7 GLU A 498 VAL A 505 -1 N SER A 501 O ALA A 515 SHEET 5 AA8 7 LEU A 604 VAL A 606 1 O VAL A 606 N ASN A 500 SHEET 6 AA8 7 GLN A 642 PRO A 647 1 O ILE A 645 N ALA A 605 SHEET 7 AA8 7 PHE A 669 VAL A 674 1 O TYR A 672 N LEU A 646 SHEET 1 AA9 2 ALA A 609 VAL A 610 0 SHEET 2 AA9 2 VAL A 616 LEU A 617 -1 O LEU A 617 N ALA A 609 CISPEP 1 THR A 262 PRO A 263 0 -6.11 CISPEP 2 ALA A 508 PRO A 509 0 5.14 CRYST1 115.742 115.742 135.998 90.00 90.00 120.00 P 6 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008640 0.004988 0.000000 0.00000 SCALE2 0.000000 0.009977 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007353 0.00000