HEADER OXIDOREDUCTASE 28-MAY-21 7EXS TITLE THERMOMICROBIUM ROSEUM SARCOSINE OXIDASE MUTANT - S320R COMPND MOL_ID: 1; COMPND 2 MOLECULE: SARCOSINE OXIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.5.3.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOMICROBIUM ROSEUM DSM 5159; SOURCE 3 ORGANISM_TAXID: 309801; SOURCE 4 STRAIN: DSM 5159; SOURCE 5 GENE: TRD_1773; SOURCE 6 EXPRESSION_SYSTEM: BACILLUS SUBTILIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1423 KEYWDS N-DEMETHYLASE, EXTREMELY STABLE, CHIRAL SPECIFICITY, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.XIN,C.SHEN,M.W.TANG,Y.SHI,Z.T.GUO,Z.H.GU,J.SHAO,L.ZHANG REVDAT 5 29-NOV-23 7EXS 1 REMARK REVDAT 4 16-MAR-22 7EXS 1 JRNL REVDAT 3 23-FEB-22 7EXS 1 JRNL REVDAT 2 16-FEB-22 7EXS 1 JRNL REVDAT 1 28-JUL-21 7EXS 0 JRNL AUTH Y.XIN,C.SHEN,M.TANG,Z.GUO,Y.SHI,Z.GU,J.SHAO,L.ZHANG JRNL TITL RECREATING THE NATURAL EVOLUTIONARY TREND IN KEY JRNL TITL 2 MICRODOMAINS PROVIDES AN EFFECTIVE STRATEGY FOR ENGINEERING JRNL TITL 3 OF A THERMOMICROBIAL N-DEMETHYLASE. JRNL REF J.BIOL.CHEM. V. 298 01656 2022 JRNL REFN ESSN 1083-351X JRNL PMID 35124004 JRNL DOI 10.1016/J.JBC.2022.101656 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Q.Y.GAO,J.SHAO,M.W.TANG,Y.XIN,L.ZHANG REMARK 1 TITL PROMOTE THE EXPRESSION AND CORRECTED FOLDING OF AN EXTREMELY REMARK 1 TITL 2 STABLE N-DEMETHYLASE BY PROMOTER RECONSTRUCTION, NATIVE REMARK 1 TITL 3 ENVIRONMENT SIMULATION AND SURFACE DESIGN REMARK 1 REF INTERNATIONAL JOURNAL OF V. 178 434 2021 REMARK 1 REF 2 BIOLOGICAL MACROMOLECULES REMARK 1 REFN ISSN 0141-8130 REMARK 1 PMID 33647338 REMARK 1 DOI 10.1016/J.IJBIOMAC.2021.02.176 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 72149 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3705 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.42 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5292 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 260 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2916 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 111 REMARK 3 SOLVENT ATOMS : 265 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.14000 REMARK 3 B22 (A**2) : -1.06000 REMARK 3 B33 (A**2) : -1.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.065 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.067 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.050 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.297 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3127 ; 0.026 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4253 ; 2.377 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 381 ; 6.516 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;31.838 ;21.448 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 480 ;13.198 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;19.336 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 454 ; 0.162 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2397 ; 0.018 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7EXS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1300022481. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JAN-21 REMARK 200 TEMPERATURE (KELVIN) : 291.15 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76088 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 65.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.76000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 2GF3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS, TRIS, AMMONIUM SULFATE, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 65.18100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.57050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 65.18100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.57050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 527 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 312 C8M FAD A 401 1.95 REMARK 500 NZ LYS A 264 O3 GOL A 402 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 334 CB VAL A 334 CG1 0.131 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 27 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG A 84 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 96 NE - CZ - NH1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP A 120 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 125 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 125 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 127 CG - CD - NE ANGL. DEV. = -13.2 DEGREES REMARK 500 ARG A 127 NE - CZ - NH1 ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG A 173 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 173 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 220 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ASP A 231 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 297 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 297 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 CYS A 312 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 TYR A 314 CB - CG - CD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 374 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 37 -169.04 -106.26 REMARK 500 SER A 60 139.08 175.86 REMARK 500 THR A 208 -62.11 -90.58 REMARK 500 ASP A 270 -135.33 55.38 REMARK 500 ALA A 303 67.50 -117.95 REMARK 500 HIS A 342 20.30 -146.22 REMARK 500 REMARK 500 REMARK: NULL DBREF 7EXS A 6 377 UNP B9L163 B9L163_THERP 6 377 SEQADV 7EXS ARG A 320 UNP B9L163 SER 320 ENGINEERED MUTATION SEQRES 1 A 372 ALA THR VAL ILE VAL VAL GLY LEU GLY ILE MET GLY SER SEQRES 2 A 372 ALA THR ALA TRP ALA LEU ALA ARG ARG GLY VAL ARG VAL SEQRES 3 A 372 VAL GLY LEU GLU GLN TYR ALA PRO PHE HIS ALA LEU GLY SEQRES 4 A 372 SER SER HIS GLY LYS THR ARG ILE ILE ARG GLU ALA TYR SEQRES 5 A 372 PHE GLU SER PRO GLU TYR VAL PRO LEU VAL GLN ARG ALA SEQRES 6 A 372 TYR GLU LEU TRP ASP GLU LEU GLY GLU ARG THR GLY ARG SEQRES 7 A 372 ARG LEU LEU ARG VAL THR GLY GLY VAL SER ILE GLY ARG SEQRES 8 A 372 LEU ASP SER PRO PHE ILE VAL GLY ALA ARG GLU SER ALA SEQRES 9 A 372 GLN ARG HIS GLY LEU ALA HIS GLU LEU LEU ASP ALA GLN SEQRES 10 A 372 GLU ALA ARG LYS ARG PHE PRO VAL LEU ALA LEU PRO ASP SEQRES 11 A 372 ASP PHE VAL ALA LEU VAL GLU GLY ARG ALA GLY ILE LEU SEQRES 12 A 372 PHE ALA GLU GLU CYS TRP ARG ALA PHE CYS GLU ASP ALA SEQRES 13 A 372 VAL ARG HIS GLY ALA GLU LEU ARG PHE GLY VAL ARG VAL SEQRES 14 A 372 HIS GLY PHE ALA PRO ASP GLY GLU GLY MET THR VAL GLU SEQRES 15 A 372 THR GLU SER GLY ARG LEU ARG ALA ASP ARG VAL VAL VAL SEQRES 16 A 372 THR ALA GLY PRO TRP SER THR THR LEU LEU ALA ASP LEU SEQRES 17 A 372 GLY LEU PRO LEU GLU VAL ARG ARG VAL LEU VAL VAL HIS SEQRES 18 A 372 VAL GLN PRO ASP ASP PRO THR ARG PHE ARG PRO GLU VAL SEQRES 19 A 372 LEU PRO ILE PHE ILE MET ASP VAL PRO GLU GLY GLU TYR SEQRES 20 A 372 TYR GLY PHE PRO PHE LEU PRO ASP GLN GLY VAL LYS PHE SEQRES 21 A 372 GLY ARG HIS ASP ASP GLY GLU VAL CYS THR PRO GLU SER SEQRES 22 A 372 VAL ARG ARG THR VAL THR ASP ASP GLU VAL ARG TRP MET SEQRES 23 A 372 THR GLY VAL LEU GLN ARG TYR LEU PRO GLY ALA ALA ARG SEQRES 24 A 372 GLU VAL LEU MET THR VAL THR CYS LEU TYR THR MET THR SEQRES 25 A 372 PRO ASP ARG HIS PHE MET ILE ASP ARG HIS PRO GLU TRP SEQRES 26 A 372 PRO GLN VAL VAL PHE ALA ALA GLY PHE SER GLY HIS GLY SEQRES 27 A 372 PHE LYS PHE ALA SER VAL MET GLY GLU ALA LEU ALA ASP SEQRES 28 A 372 LEU ALA LEU GLU GLY ALA SER ARG LEU PRO ILE GLY PHE SEQRES 29 A 372 LEU SER PHE ARG ARG LEU ALA LYS HET FAD A 401 53 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET GOL A 407 6 HET CL A 408 1 HET CL A 409 1 HET CL A 410 1 HET CL A 411 1 HET CL A 412 1 HET CL A 413 1 HET CL A 414 1 HET PO4 A 415 5 HET PO4 A 416 5 HET PO4 A 417 5 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM PO4 PHOSPHATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 GOL 6(C3 H8 O3) FORMUL 9 CL 7(CL 1-) FORMUL 16 PO4 3(O4 P 3-) FORMUL 19 HOH *265(H2 O) HELIX 1 AA1 GLY A 14 ARG A 27 1 14 HELIX 2 AA2 GLU A 62 GLY A 82 1 21 HELIX 3 AA3 SER A 99 GLY A 113 1 15 HELIX 4 AA4 ALA A 121 PHE A 128 1 8 HELIX 5 AA5 ALA A 150 HIS A 164 1 15 HELIX 6 AA6 ALA A 202 PRO A 204 5 3 HELIX 7 AA7 TRP A 205 LEU A 210 1 6 HELIX 8 AA8 ALA A 211 GLY A 214 5 4 HELIX 9 AA9 ASP A 231 ARG A 236 5 6 HELIX 10 AB1 THR A 284 LEU A 299 1 16 HELIX 11 AB2 GLY A 343 LYS A 345 5 3 HELIX 12 AB3 PHE A 346 GLY A 361 1 16 HELIX 13 AB4 ILE A 367 ALA A 376 5 10 SHEET 1 AA1 6 GLU A 167 PHE A 170 0 SHEET 2 AA1 6 ARG A 30 GLU A 35 1 N GLY A 33 O GLU A 167 SHEET 3 AA1 6 THR A 7 VAL A 11 1 N VAL A 10 O LEU A 34 SHEET 4 AA1 6 ARG A 197 VAL A 200 1 O VAL A 199 N VAL A 11 SHEET 5 AA1 6 VAL A 333 ALA A 337 1 O VAL A 334 N VAL A 200 SHEET 6 AA1 6 MET A 323 ARG A 326 -1 N MET A 323 O ALA A 337 SHEET 1 AA2 3 THR A 50 ILE A 53 0 SHEET 2 AA2 3 GLY A 146 PHE A 149 -1 O LEU A 148 N ARG A 51 SHEET 3 AA2 3 LEU A 86 VAL A 88 -1 N ARG A 87 O ILE A 147 SHEET 1 AA3 8 HIS A 116 ASP A 120 0 SHEET 2 AA3 8 VAL A 138 GLU A 142 -1 O ALA A 139 N LEU A 119 SHEET 3 AA3 8 GLY A 91 GLY A 95 -1 N GLY A 95 O VAL A 138 SHEET 4 AA3 8 ILE A 242 VAL A 247 1 O ASP A 246 N ILE A 94 SHEET 5 AA3 8 GLY A 250 GLY A 254 -1 O TYR A 252 N MET A 245 SHEET 6 AA3 8 VAL A 263 ARG A 267 -1 O GLY A 266 N TYR A 253 SHEET 7 AA3 8 GLU A 218 GLN A 228 -1 N VAL A 227 O VAL A 263 SHEET 8 AA3 8 GLU A 272 CYS A 274 -1 O GLU A 272 N ARG A 221 SHEET 1 AA4 8 HIS A 116 ASP A 120 0 SHEET 2 AA4 8 VAL A 138 GLU A 142 -1 O ALA A 139 N LEU A 119 SHEET 3 AA4 8 GLY A 91 GLY A 95 -1 N GLY A 95 O VAL A 138 SHEET 4 AA4 8 ILE A 242 VAL A 247 1 O ASP A 246 N ILE A 94 SHEET 5 AA4 8 GLY A 250 GLY A 254 -1 O TYR A 252 N MET A 245 SHEET 6 AA4 8 VAL A 263 ARG A 267 -1 O GLY A 266 N TYR A 253 SHEET 7 AA4 8 GLU A 218 GLN A 228 -1 N VAL A 227 O VAL A 263 SHEET 8 AA4 8 GLU A 305 MET A 316 -1 O MET A 316 N GLU A 218 SHEET 1 AA5 3 VAL A 174 PRO A 179 0 SHEET 2 AA5 3 MET A 184 THR A 188 -1 O GLU A 187 N HIS A 175 SHEET 3 AA5 3 GLY A 191 ALA A 195 -1 O LEU A 193 N VAL A 186 CRYST1 130.362 47.141 64.763 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007671 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021213 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015441 0.00000