HEADER DNA BINDING PROTEIN 28-MAY-21 7EXX TITLE THE STRUCTURE OF DNDG COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA PHOSPHOROTHIOATION-DEPENDENT RESTRICTION PROTEIN DPTG; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: DPTG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS HTH MOTIF, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.WU,L.WANG REVDAT 3 21-DEC-22 7EXX 1 AUTHOR JRNL REVDAT 2 14-DEC-22 7EXX 1 AUTHOR JRNL REVDAT 1 01-JUN-22 7EXX 0 JRNL AUTH D.WU,Y.TANG,S.CHEN,Y.HE,X.CHANG,W.ZHENG,Z.DENG,Z.LI,L.WANG, JRNL AUTH 2 G.WU,S.CHEN JRNL TITL THE FUNCTIONAL COUPLING BETWEEN RESTRICTION AND DNA JRNL TITL 2 PHOSPHOROTHIOATE MODIFICATION SYSTEMS UNDERLYING THE DNDFGH JRNL TITL 3 RESTRICTION COMPLEX JRNL REF NAT CATAL 2022 JRNL REFN ESSN 2520-1158 JRNL DOI 10.1038/S41929-022-00884-2 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 23171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1232 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1199 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 65.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3604 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 96 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : 0.53000 REMARK 3 B33 (A**2) : -0.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.291 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.224 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3681 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3563 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4965 ; 1.198 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8172 ; 3.520 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 437 ; 5.932 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 190 ;38.397 ;24.421 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 681 ;16.633 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;15.726 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 545 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4158 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 890 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7EXX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1300022398. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97916 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26349 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CITRATE TRIBASIC, EVAPORATION, REMARK 280 TEMPERATURE 287.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.74600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.74600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 69.62400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 91.14300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 69.62400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 91.14300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.74600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 69.62400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 91.14300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 29.74600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 69.62400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 91.14300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 131 REMARK 465 GLN A 132 REMARK 465 ASP A 133 REMARK 465 LYS A 134 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 266 CG CD CE NZ REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 11 -167.08 -126.46 REMARK 500 TYR A 18 -59.49 76.09 REMARK 500 TYR A 49 114.47 -164.11 REMARK 500 ILE A 66 -72.99 -126.92 REMARK 500 ASP A 67 14.88 81.58 REMARK 500 ALA A 97 70.95 -109.80 REMARK 500 ASN A 211 30.13 -90.84 REMARK 500 SER A 221 95.33 -64.02 REMARK 500 GLU A 306 -103.30 -104.76 REMARK 500 ARG A 363 54.09 -141.57 REMARK 500 ARG A 427 -92.53 -143.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 47 O REMARK 620 2 THR A 48 O 75.7 REMARK 620 3 THR A 48 OG1 73.4 77.6 REMARK 620 4 ARG A 427 O 21.0 58.2 82.2 REMARK 620 5 ASP A 430 O 20.8 59.9 84.2 2.4 REMARK 620 N 1 2 3 4 DBREF1 7EXX A 1 441 UNP A0A0P7R7Y1_ECOLX DBREF2 7EXX A A0A0P7R7Y1 1 441 SEQADV 7EXX GLY A -2 UNP A0A0P7R7Y EXPRESSION TAG SEQADV 7EXX SER A -1 UNP A0A0P7R7Y EXPRESSION TAG SEQADV 7EXX HIS A 0 UNP A0A0P7R7Y EXPRESSION TAG SEQRES 1 A 444 GLY SER HIS MET TYR PRO ILE ALA THR ASN LEU LYS VAL SEQRES 2 A 444 SER ASN ASN GLN LEU ASP SER TYR LEU PRO ILE ARG ASN SEQRES 3 A 444 LYS ASN ASN ASN ILE ASP TRP GLN ILE VAL THR GLY LEU SEQRES 4 A 444 VAL LEU SER TYR ALA VAL LYS TYR LYS ILE ASP THR TYR SEQRES 5 A 444 SER LEU GLU GLN PHE ARG GLU ASP CSP LYS THR HIS LEU SEQRES 6 A 444 GLN ILE LEU ILE ASP GLU PRO ALA PHE LEU SER VAL LEU SEQRES 7 A 444 GLU ARG MET TYR PHE SER SER GLN ASP ILE PHE ARG VAL SEQRES 8 A 444 SER PRO LEU PHE LEU LEU PHE HIS ALA GLN PHE ASP GLY SEQRES 9 A 444 GLU LYS ILE SER ALA GLY SER THR ALA ASP LYS ARG LEU SEQRES 10 A 444 GLY THR LEU PHE ALA ASN LEU MET ARG ASP PHE SER LEU SEQRES 11 A 444 ASN ASN PRO ILE GLN ASP LYS LEU ASN PHE ILE GLU LYS SEQRES 12 A 444 GLU MET LEU ASN LYS LEU ASN LYS LYS LEU ILE ARG LEU SEQRES 13 A 444 GLY GLU GLY PRO PHE ALA LYS GLU GLN PRO TYR LEU PRO SEQRES 14 A 444 TYR LEU VAL THR CYS PHE GLN SER ASP LEU ALA PHE LEU SEQRES 15 A 444 ALA GLU HIS PRO GLN TYR LEU LEU GLN GLU LEU THR ASN SEQRES 16 A 444 THR LEU ARG LEU TYR ALA PHE SER TRP CYS ALA GLN LEU SEQRES 17 A 444 ALA LEU ASN LEU ASP ASN TRP GLN ASP GLY GLU PRO GLN SEQRES 18 A 444 SER LYS SER LEU PHE PHE ILE LEU ASP THR GLU LYS ALA SEQRES 19 A 444 SER SER GLU ARG ASP LYS ILE LYS LEU PHE GLY TYR LYS SEQRES 20 A 444 TRP PHE ALA ARG GLN SER GLU LYS LEU PHE PRO VAL LEU SEQRES 21 A 444 SER ALA LEU GLU VAL LEU GLN VAL LYS GLY GLU GLU LYS SEQRES 22 A 444 ARG PRO LEU TRP GLN VAL TYR GLN ASP CYS LEU GLY TYR SEQRES 23 A 444 SER ASP THR SER ASN ARG VAL LEU ASN GLU LEU ASN ASN SEQRES 24 A 444 TYR ILE GLN LYS PHE ILE SER LYS GLU GLU ARG ASP LEU SEQRES 25 A 444 PRO GLU ARG ASP ARG ALA THR ASN LEU GLU ASP ALA PHE SEQRES 26 A 444 LYS GLN LEU LEU SER VAL ALA VAL GLU GLN PHE GLN GLY SEQRES 27 A 444 LYS LYS THR GLU ARG ALA ALA VAL ASN ARG LYS TYR ILE SEQRES 28 A 444 ASN GLU LEU GLU SER GLN ILE CYS THR ASP PHE ILE GLN SEQRES 29 A 444 VAL ARG GLY ARG ALA GLY LYS VAL LEU VAL LEU ASN GLN SEQRES 30 A 444 ASP ARG LEU LEU LEU LEU THR ASN LEU THR VAL GLY LYS SEQRES 31 A 444 ASN LYS LYS LEU ARG LEU HIS GLU LEU LEU ARG GLY PHE SEQRES 32 A 444 GLU GLN ARG GLY PHE TYR LEU ASP ASN GLN SER THR GLN SEQRES 33 A 444 MET LEU VAL ALA PHE TYR GLU ARG MET GLY ASN VAL GLU SEQRES 34 A 444 ARG MET SER ASP SER GLY ASP ALA VAL TYR VAL ARG LYS SEQRES 35 A 444 THR VAL MODRES 7EXX CSP A 58 CYS MODIFIED RESIDUE HET CSP A 58 10 HET NA A 501 1 HETNAM CSP S-PHOSPHOCYSTEINE HETNAM NA SODIUM ION FORMUL 1 CSP C3 H8 N O5 P S FORMUL 2 NA NA 1+ FORMUL 3 HOH *96(H2 O) HELIX 1 AA1 ASP A 29 LYS A 43 1 15 HELIX 2 AA2 SER A 50 ILE A 66 1 17 HELIX 3 AA3 GLU A 68 TYR A 79 1 12 HELIX 4 AA4 SER A 81 ARG A 87 1 7 HELIX 5 AA5 VAL A 88 HIS A 96 5 9 HELIX 6 AA6 SER A 108 ASN A 120 1 13 HELIX 7 AA7 ASN A 136 LEU A 150 1 15 HELIX 8 AA8 LEU A 165 GLU A 181 1 17 HELIX 9 AA9 HIS A 182 LEU A 209 1 28 HELIX 10 AB1 ASP A 210 TRP A 212 5 3 HELIX 11 AB2 ARG A 235 PHE A 241 1 7 HELIX 12 AB3 GLY A 242 GLU A 251 1 10 HELIX 13 AB4 LYS A 252 LEU A 263 1 12 HELIX 14 AB5 PRO A 272 TYR A 283 1 12 HELIX 15 AB6 ASN A 288 ILE A 302 1 15 HELIX 16 AB7 ASN A 317 GLN A 332 1 16 HELIX 17 AB8 THR A 338 ILE A 355 1 18 HELIX 18 AB9 GLY A 364 ALA A 366 5 3 HELIX 19 AC1 ASN A 373 GLY A 386 1 14 HELIX 20 AC2 LEU A 393 ARG A 403 1 11 HELIX 21 AC3 ASP A 408 GLY A 423 1 16 SHEET 1 AA1 4 LYS A 103 ILE A 104 0 SHEET 2 AA1 4 GLN A 98 ASP A 100 -1 N ASP A 100 O LYS A 103 SHEET 3 AA1 4 TYR A 44 ASP A 47 1 N ILE A 46 O PHE A 99 SHEET 4 AA1 4 ILE A 151 ARG A 152 -1 O ILE A 151 N LYS A 45 SHEET 1 AA2 3 ILE A 225 LEU A 226 0 SHEET 2 AA2 3 LYS A 368 LEU A 372 1 O LEU A 372 N ILE A 225 SHEET 3 AA2 3 ILE A 360 VAL A 362 -1 N GLN A 361 O VAL A 369 SHEET 1 AA3 3 LYS A 390 ARG A 392 0 SHEET 2 AA3 3 TYR A 436 ARG A 438 -1 O VAL A 437 N LEU A 391 SHEET 3 AA3 3 VAL A 425 GLU A 426 -1 N GLU A 426 O TYR A 436 LINK C ASP A 57 N CSP A 58 1555 1555 1.33 LINK C CSP A 58 N LYS A 59 1555 1555 1.33 LINK O ASP A 47 NA NA A 501 1555 1556 2.51 LINK O THR A 48 NA NA A 501 1555 1556 2.37 LINK OG1 THR A 48 NA NA A 501 1555 1556 2.31 LINK O ARG A 427 NA NA A 501 1555 1555 2.29 LINK O ASP A 430 NA NA A 501 1555 1555 2.33 CRYST1 139.248 182.286 59.492 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007181 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005486 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016809 0.00000