HEADER TRANSCRIPTION 03-JUN-21 7F09 TITLE CRYSTAL STRUCTURE OF THE HLH-LZ DOMAIN OF HUMAN TFE3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR E3; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 33,BHLHE33; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TFE3, BHLHE33; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTION FACTOR E3, HLH-LZ DOMAIN, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR G.YANG,P.LI,Z.LIU,S.WU,C.ZHUANG,H.QIAO,P.FANG,J.WANG REVDAT 2 29-NOV-23 7F09 1 REMARK REVDAT 1 21-JUL-21 7F09 0 JRNL AUTH G.YANG,P.LI,Z.LIU,S.WU,C.ZHUANG,H.QIAO,L.ZHENG,P.FANG,C.LEI, JRNL AUTH 2 J.WANG JRNL TITL STRUCTURAL BASIS FOR THE DIMERIZATION MECHANISM OF HUMAN JRNL TITL 2 TRANSCRIPTION FACTOR E3. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 569 41 2021 JRNL REFN ESSN 1090-2104 JRNL PMID 34225079 JRNL DOI 10.1016/J.BBRC.2021.06.091 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 79.7 REMARK 3 NUMBER OF REFLECTIONS : 17457 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 863 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 18.8330 - 4.7042 0.76 2631 124 0.2100 0.2319 REMARK 3 2 4.7042 - 3.7435 0.81 2879 120 0.1875 0.1923 REMARK 3 3 3.7435 - 3.2731 0.79 2706 168 0.2351 0.2206 REMARK 3 4 3.2731 - 2.9751 0.79 2734 139 0.2545 0.3520 REMARK 3 5 2.9751 - 2.7626 0.82 2835 163 0.2711 0.3252 REMARK 3 6 2.7626 - 2.6001 0.81 2809 149 0.2760 0.3279 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -0.5596 4.0699 6.6314 REMARK 3 T TENSOR REMARK 3 T11: 0.4072 T22: 0.4354 REMARK 3 T33: 0.3940 T12: 0.0061 REMARK 3 T13: -0.0111 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: -0.2737 L22: -0.0094 REMARK 3 L33: 0.4022 L12: 0.0975 REMARK 3 L13: 0.0282 L23: 0.3872 REMARK 3 S TENSOR REMARK 3 S11: -0.0365 S12: -0.0343 S13: -0.0137 REMARK 3 S21: 0.0710 S22: 0.0241 S23: 0.0157 REMARK 3 S31: 0.0665 S32: 0.0461 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7F09 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1300022607. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17459 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 47.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.25300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6KU4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ZINC ACETATE, ZINC CHLORIDE, BIS-TRIS REMARK 280 PH 7.5, PEG 3350, PEG 2000, PEG 4000 AND PEG 5000MME, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -106.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 375 REMARK 465 SER B 376 REMARK 465 SER B 377 REMARK 465 ASP B 378 REMARK 465 PRO B 379 REMARK 465 GLU B 380 REMARK 465 SER C 376 REMARK 465 SER C 377 REMARK 465 ASP C 378 REMARK 465 PRO C 379 REMARK 465 GLU C 380 REMARK 465 MET C 381 REMARK 465 GLY C 432 REMARK 465 LYS D 375 REMARK 465 SER D 376 REMARK 465 SER D 377 REMARK 465 ASP D 378 REMARK 465 PRO D 379 REMARK 465 GLU D 380 REMARK 465 MET D 381 REMARK 465 ARG D 382 REMARK 465 GLY D 432 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 367 CD CE NZ REMARK 470 MET A 381 CG SD CE REMARK 470 LYS A 385 CG CD CE NZ REMARK 470 LYS A 390 CG CD CE NZ REMARK 470 LYS A 398 CG CD CE NZ REMARK 470 LYS A 401 CG CD CE NZ REMARK 470 GLU A 402 CG CD OE1 OE2 REMARK 470 GLN A 404 CG CD OE1 NE2 REMARK 470 ARG A 405 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 407 CG CD CE NZ REMARK 470 GLU A 410 CG CD OE1 OE2 REMARK 470 ARG A 412 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 414 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 417 CG CD OE1 OE2 REMARK 470 LYS B 367 CG CD CE NZ REMARK 470 LYS B 390 CG CD CE NZ REMARK 470 LYS B 401 CG CD CE NZ REMARK 470 GLU B 402 CG CD OE1 OE2 REMARK 470 ARG B 405 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 408 CG OD1 OD2 REMARK 470 GLU B 410 CG CD OE1 OE2 REMARK 470 ARG B 412 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 414 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 417 CG CD OE1 OE2 REMARK 470 ARG B 421 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 367 CG CD CE NZ REMARK 470 LYS C 375 CG CD CE NZ REMARK 470 ARG C 382 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 401 CG CD CE NZ REMARK 470 ARG C 405 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 407 CG CD CE NZ REMARK 470 GLU C 410 CG CD OE1 OE2 REMARK 470 ARG C 412 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 417 CG CD OE1 OE2 REMARK 470 TRP D 383 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 383 CZ3 CH2 REMARK 470 LYS D 390 CD CE NZ REMARK 470 LYS D 398 CG CD CE NZ REMARK 470 GLU D 402 CG CD OE1 OE2 REMARK 470 GLN D 404 CG CD OE1 NE2 REMARK 470 ARG D 405 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 407 CG CD CE NZ REMARK 470 ASP D 408 CG OD1 OD2 REMARK 470 GLU D 410 CG CD OE1 OE2 REMARK 470 ARG D 412 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 418 CG CD OE1 NE2 REMARK 470 ARG D 421 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 382 80.11 50.94 REMARK 500 LEU B 430 -152.39 -97.33 REMARK 500 ASN D 384 -9.55 68.80 REMARK 500 LYS D 385 -50.40 66.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 617 DISTANCE = 8.77 ANGSTROMS REMARK 525 HOH B 616 DISTANCE = 8.67 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 359 N REMARK 620 2 GLY A 359 O 78.7 REMARK 620 3 ASP A 364 OD2 140.1 83.6 REMARK 620 4 GLU B 368 OE2 122.2 78.1 18.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 359 N REMARK 620 2 GLY B 359 O 72.2 REMARK 620 3 GLU B 429 OE1 80.1 16.1 REMARK 620 4 GLU B 429 OE2 78.6 15.6 1.6 REMARK 620 5 HOH B 606 O 112.1 102.5 113.3 114.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 365 NE REMARK 620 2 HOH B 601 O 88.8 REMARK 620 3 HOH B 609 O 156.1 72.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY C 359 N REMARK 620 2 GLY C 359 O 71.8 REMARK 620 3 ASP C 364 OD2 106.2 86.3 REMARK 620 4 HOH C 602 O 84.8 150.9 83.9 REMARK 620 5 GLU D 368 OE2 101.9 75.1 11.1 93.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 368 OE1 REMARK 620 2 HOH C 605 O 74.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY D 359 N REMARK 620 2 GLY D 359 O 81.4 REMARK 620 3 GLU D 429 OE1 85.1 17.5 REMARK 620 4 GLU D 429 OE2 83.6 18.1 1.7 REMARK 620 5 HOH D 608 O 102.6 96.9 112.9 114.1 REMARK 620 N 1 2 3 4 DBREF 7F09 A 360 430 UNP P19532 TFE3_HUMAN 360 430 DBREF 7F09 B 360 430 UNP P19532 TFE3_HUMAN 360 430 DBREF 7F09 C 360 430 UNP P19532 TFE3_HUMAN 360 430 DBREF 7F09 D 360 430 UNP P19532 TFE3_HUMAN 360 430 SEQADV 7F09 GLY A 359 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY A 431 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY A 432 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY B 359 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY B 431 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY B 432 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY C 359 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY C 431 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY C 432 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY D 359 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY D 431 UNP P19532 EXPRESSION TAG SEQADV 7F09 GLY D 432 UNP P19532 EXPRESSION TAG SEQRES 1 A 74 GLY PHE ASN ILE ASN ASP ARG ILE LYS GLU LEU GLY THR SEQRES 2 A 74 LEU ILE PRO LYS SER SER ASP PRO GLU MET ARG TRP ASN SEQRES 3 A 74 LYS GLY THR ILE LEU LYS ALA SER VAL ASP TYR ILE ARG SEQRES 4 A 74 LYS LEU GLN LYS GLU GLN GLN ARG SER LYS ASP LEU GLU SEQRES 5 A 74 SER ARG GLN ARG SER LEU GLU GLN ALA ASN ARG SER LEU SEQRES 6 A 74 GLN LEU ARG ILE GLN GLU LEU GLY GLY SEQRES 1 B 74 GLY PHE ASN ILE ASN ASP ARG ILE LYS GLU LEU GLY THR SEQRES 2 B 74 LEU ILE PRO LYS SER SER ASP PRO GLU MET ARG TRP ASN SEQRES 3 B 74 LYS GLY THR ILE LEU LYS ALA SER VAL ASP TYR ILE ARG SEQRES 4 B 74 LYS LEU GLN LYS GLU GLN GLN ARG SER LYS ASP LEU GLU SEQRES 5 B 74 SER ARG GLN ARG SER LEU GLU GLN ALA ASN ARG SER LEU SEQRES 6 B 74 GLN LEU ARG ILE GLN GLU LEU GLY GLY SEQRES 1 C 74 GLY PHE ASN ILE ASN ASP ARG ILE LYS GLU LEU GLY THR SEQRES 2 C 74 LEU ILE PRO LYS SER SER ASP PRO GLU MET ARG TRP ASN SEQRES 3 C 74 LYS GLY THR ILE LEU LYS ALA SER VAL ASP TYR ILE ARG SEQRES 4 C 74 LYS LEU GLN LYS GLU GLN GLN ARG SER LYS ASP LEU GLU SEQRES 5 C 74 SER ARG GLN ARG SER LEU GLU GLN ALA ASN ARG SER LEU SEQRES 6 C 74 GLN LEU ARG ILE GLN GLU LEU GLY GLY SEQRES 1 D 74 GLY PHE ASN ILE ASN ASP ARG ILE LYS GLU LEU GLY THR SEQRES 2 D 74 LEU ILE PRO LYS SER SER ASP PRO GLU MET ARG TRP ASN SEQRES 3 D 74 LYS GLY THR ILE LEU LYS ALA SER VAL ASP TYR ILE ARG SEQRES 4 D 74 LYS LEU GLN LYS GLU GLN GLN ARG SER LYS ASP LEU GLU SEQRES 5 D 74 SER ARG GLN ARG SER LEU GLU GLN ALA ASN ARG SER LEU SEQRES 6 D 74 GLN LEU ARG ILE GLN GLU LEU GLY GLY HET EDO A 501 4 HET ZN B 501 1 HET ZN B 502 1 HET ZN B 503 1 HET EDO B 504 4 HET EDO B 505 4 HET ZN C 501 1 HET ZN C 502 1 HET ZN D 501 1 HET EDO D 502 4 HET EDO D 503 4 HET EDO D 504 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM ZN ZINC ION HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO 6(C2 H6 O2) FORMUL 6 ZN 6(ZN 2+) FORMUL 17 HOH *52(H2 O) HELIX 1 AA1 PHE A 360 ILE A 373 1 14 HELIX 2 AA2 ASN A 384 LEU A 430 1 47 HELIX 3 AA3 ASN B 361 ILE B 373 1 13 HELIX 4 AA4 ASN B 384 SER B 406 1 23 HELIX 5 AA5 LYS B 407 LEU B 430 1 24 HELIX 6 AA6 PHE C 360 ILE C 373 1 14 HELIX 7 AA7 ASN C 384 LEU C 430 1 47 HELIX 8 AA8 ASN D 361 ILE D 373 1 13 HELIX 9 AA9 LYS D 385 GLY D 431 1 47 LINK N GLY A 359 ZN ZN B 502 1555 1455 2.05 LINK O GLY A 359 ZN ZN B 502 1555 1455 2.26 LINK OD2 ASP A 364 ZN ZN B 502 1555 1455 2.00 LINK N GLY B 359 ZN ZN B 503 1555 1555 2.24 LINK O GLY B 359 ZN ZN B 503 1555 1555 2.22 LINK NE ARG B 365 ZN ZN B 501 1555 1555 2.67 LINK OE2 GLU B 368 ZN ZN B 502 1555 1555 2.09 LINK OE1 GLU B 429 ZN ZN B 503 1555 1556 1.94 LINK OE2 GLU B 429 ZN ZN B 503 1555 1556 1.93 LINK ZN ZN B 501 O HOH B 601 1555 1555 2.35 LINK ZN ZN B 501 O HOH B 609 1555 1555 2.23 LINK ZN ZN B 503 O HOH B 606 1555 1555 2.19 LINK N GLY C 359 ZN ZN C 502 1555 1555 2.37 LINK O GLY C 359 ZN ZN C 502 1555 1555 2.28 LINK OD2 ASP C 364 ZN ZN C 502 1555 1555 1.94 LINK OE1 GLU C 368 ZN ZN C 501 1555 1555 2.53 LINK ZN ZN C 501 O HOH C 605 1555 1555 2.69 LINK ZN ZN C 502 O HOH C 602 1555 1655 2.30 LINK ZN ZN C 502 OE2 GLU D 368 1455 1555 2.27 LINK N GLY D 359 ZN ZN D 501 1555 1555 2.13 LINK O GLY D 359 ZN ZN D 501 1555 1555 2.12 LINK OE1 GLU D 429 ZN ZN D 501 1555 1554 2.00 LINK OE2 GLU D 429 ZN ZN D 501 1555 1554 2.06 LINK ZN ZN D 501 O HOH D 608 1555 1555 2.10 CRYST1 27.940 47.370 69.960 85.24 87.21 88.32 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.035791 -0.001051 -0.001666 0.00000 SCALE2 0.000000 0.021120 -0.001730 0.00000 SCALE3 0.000000 0.000000 0.014359 0.00000