HEADER VIRAL PROTEIN/PROTEIN BINDING 22-JUN-21 7F5R TITLE CRYSTAL STRUCTURE OF SARS-COV-2 Y453F-RBD BOUND TO MINK ACE2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MINK ACE2; COMPND 3 CHAIN: A, B, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SPIKE PROTEIN S1; COMPND 7 CHAIN: E, C, F; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEOVISON VISON; SOURCE 3 ORGANISM_TAXID: 452646; SOURCE 4 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 8 2; SOURCE 9 ORGANISM_COMMON: 2019-NCOV, SARS-COV-2; SOURCE 10 ORGANISM_TAXID: 2697049; SOURCE 11 GENE: S, 2; SOURCE 12 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS SARS-COV-2, RECEPTOR-BINDING DOMAIN, Y453F VARIANT, MINK-ACE2, VIRAL KEYWDS 2 PROTEIN, VIRAL PROTEIN-PROTEIN BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.Q.WANG,Q.DING,J.LAN,W.L.REN REVDAT 2 29-NOV-23 7F5R 1 REMARK REVDAT 1 22-JUN-22 7F5R 0 JRNL AUTH X.Q.WANG,Q.DING,J.LAN,W.L.REN JRNL TITL CRYSTAL STRUCTURE OF SARS-COV-2 Y453F-RBD BOUND TO MINK ACE2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 101418 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5072 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.5300 - 9.3200 0.92 3257 154 0.1892 0.1987 REMARK 3 2 9.3200 - 7.4100 0.98 3311 183 0.1477 0.1695 REMARK 3 3 7.4100 - 6.4800 0.98 3266 175 0.1675 0.1867 REMARK 3 4 6.4800 - 5.8900 0.98 3248 170 0.1623 0.2015 REMARK 3 5 5.8900 - 5.4700 0.98 3243 180 0.1582 0.1923 REMARK 3 6 5.4700 - 5.1400 0.99 3276 170 0.1436 0.1792 REMARK 3 7 5.1400 - 4.8900 0.99 3216 181 0.1380 0.1648 REMARK 3 8 4.8900 - 4.6700 0.99 3252 168 0.1330 0.1895 REMARK 3 9 4.6700 - 4.5000 0.99 3230 161 0.1354 0.1733 REMARK 3 10 4.5000 - 4.3400 0.99 3247 177 0.1432 0.1726 REMARK 3 11 4.3400 - 4.2000 0.98 3216 165 0.1543 0.2019 REMARK 3 12 4.2000 - 4.0800 0.99 3240 162 0.1634 0.2114 REMARK 3 13 4.0800 - 3.9800 0.99 3209 179 0.1712 0.1966 REMARK 3 14 3.9800 - 3.8800 0.99 3238 178 0.1679 0.2043 REMARK 3 15 3.8800 - 3.7900 0.99 3202 173 0.1782 0.2130 REMARK 3 16 3.7900 - 3.7100 0.99 3269 142 0.1783 0.2497 REMARK 3 17 3.7100 - 3.6400 0.99 3231 158 0.2059 0.2251 REMARK 3 18 3.6400 - 3.5700 0.99 3232 178 0.2056 0.2643 REMARK 3 19 3.5700 - 3.5000 1.00 3196 185 0.2042 0.2380 REMARK 3 20 3.5000 - 3.4500 0.99 3234 165 0.2135 0.2485 REMARK 3 21 3.4500 - 3.3900 1.00 3224 188 0.2358 0.2799 REMARK 3 22 3.3900 - 3.3400 1.00 3203 161 0.2437 0.2983 REMARK 3 23 3.3400 - 3.2900 0.99 3255 183 0.2626 0.3326 REMARK 3 24 3.2900 - 3.2400 0.99 3166 183 0.2649 0.3019 REMARK 3 25 3.2400 - 3.2000 0.99 3186 170 0.2667 0.3294 REMARK 3 26 3.2000 - 3.1600 1.00 3256 151 0.2556 0.2604 REMARK 3 27 3.1600 - 3.1200 0.99 3213 162 0.2654 0.3124 REMARK 3 28 3.1200 - 3.0800 0.99 3239 175 0.2783 0.3549 REMARK 3 29 3.0800 - 3.0400 1.00 3189 166 0.2813 0.3497 REMARK 3 30 3.0400 - 3.0100 0.80 2602 129 0.2990 0.3341 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 47.8286 75.2513 44.7871 REMARK 3 T TENSOR REMARK 3 T11: 0.4127 T22: 0.3494 REMARK 3 T33: 0.3364 T12: 0.0175 REMARK 3 T13: 0.0092 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 0.7955 L22: 0.3093 REMARK 3 L33: 0.3535 L12: 0.0628 REMARK 3 L13: -0.0295 L23: -0.0576 REMARK 3 S TENSOR REMARK 3 S11: -0.0198 S12: 0.0646 S13: -0.0154 REMARK 3 S21: -0.0052 S22: -0.0280 S23: -0.0394 REMARK 3 S31: -0.0039 S32: 0.0790 S33: 0.0445 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7F5R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1300022916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101471 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.010 REMARK 200 RESOLUTION RANGE LOW (A) : 43.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.12 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6M0J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M SODIUM/POTASSIUM PHOSPHATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 145.09250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.09250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 145.09250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.09250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, F, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 714 REMARK 465 PRO E 332 REMARK 465 THR E 333 REMARK 465 ASN E 334 REMARK 465 SER E 366 REMARK 465 VAL E 367 REMARK 465 LEU E 368 REMARK 465 TYR E 369 REMARK 465 ASN E 370 REMARK 465 SER E 371 REMARK 465 ALA E 372 REMARK 465 SER E 373 REMARK 465 PHE E 374 REMARK 465 ASP B 615 REMARK 465 PRO C 332 REMARK 465 SER C 366 REMARK 465 VAL C 367 REMARK 465 LEU C 368 REMARK 465 TYR C 369 REMARK 465 ASN C 370 REMARK 465 SER C 371 REMARK 465 ALA C 372 REMARK 465 SER C 373 REMARK 465 PHE C 374 REMARK 465 ASP D 615 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 457 NH1 ARG A 460 1.95 REMARK 500 OG SER A 77 O LEU A 100 2.16 REMARK 500 OH TYR A 215 OE1 GLU A 670 2.17 REMARK 500 NH1 ARG A 192 O GLU A 197 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 74 CB GLU A 74 CG 0.120 REMARK 500 GLU A 74 CG GLU A 74 CD 0.095 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 169 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 LEU B 584 CA - CB - CG ANGL. DEV. = 17.6 DEGREES REMARK 500 LEU D 456 CA - CB - CG ANGL. DEV. = 16.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 53 87.82 -160.00 REMARK 500 SER A 105 -19.64 75.43 REMARK 500 MET A 282 33.38 -142.15 REMARK 500 ASP A 338 -156.27 -84.60 REMARK 500 PRO A 425 152.21 -48.27 REMARK 500 GLU A 635 -67.36 -92.41 REMARK 500 LYS A 640 -5.16 69.33 REMARK 500 PRO E 337 44.97 -84.03 REMARK 500 ASN E 360 63.16 62.75 REMARK 500 ASP E 364 72.32 -105.47 REMARK 500 ASP E 428 38.37 -98.99 REMARK 500 ASN B 195 44.87 70.05 REMARK 500 MET B 282 29.46 -143.39 REMARK 500 ASP B 338 47.87 -91.72 REMARK 500 ASN B 339 -11.18 75.31 REMARK 500 CYS B 498 50.94 -143.10 REMARK 500 HIS C 519 55.85 37.86 REMARK 500 ASN D 53 93.89 -162.38 REMARK 500 TRP D 211 -3.24 72.26 REMARK 500 MET D 282 32.55 -141.83 REMARK 500 ASN D 339 -3.73 72.05 REMARK 500 GLN D 472 33.33 -142.29 REMARK 500 CYS D 498 54.31 -141.55 REMARK 500 ALA D 533 4.28 -66.39 REMARK 500 THR F 333 -6.07 78.00 REMARK 500 PRO F 337 44.80 -74.80 REMARK 500 ALA F 352 41.99 -106.87 REMARK 500 ASP F 364 52.42 -95.39 REMARK 500 ASN F 422 -53.33 -123.19 REMARK 500 ARG F 457 141.84 -171.57 REMARK 500 PHE F 464 12.71 56.49 REMARK 500 ASN F 487 31.50 72.01 REMARK 500 LEU F 518 -177.51 -69.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR B 52 ASN B 53 149.65 REMARK 500 GLN D 102 SER D 103 132.07 REMARK 500 REMARK 500 REMARK: NULL DBREF 7F5R A 19 714 PDB 7F5R 7F5R 19 714 DBREF 7F5R E 333 527 UNP P0DTC2 SPIKE_SARS2 333 527 DBREF 7F5R B 19 615 PDB 7F5R 7F5R 19 615 DBREF 7F5R C 333 527 UNP P0DTC2 SPIKE_SARS2 333 527 DBREF 7F5R D 19 615 PDB 7F5R 7F5R 19 615 DBREF 7F5R F 333 527 UNP P0DTC2 SPIKE_SARS2 333 527 SEQADV 7F5R PRO E 332 UNP P0DTC2 EXPRESSION TAG SEQADV 7F5R PHE E 453 UNP P0DTC2 TYR 453 VARIANT SEQADV 7F5R HIS E 528 UNP P0DTC2 EXPRESSION TAG SEQADV 7F5R PRO C 332 UNP P0DTC2 EXPRESSION TAG SEQADV 7F5R PHE C 453 UNP P0DTC2 TYR 453 VARIANT SEQADV 7F5R HIS C 528 UNP P0DTC2 EXPRESSION TAG SEQADV 7F5R PRO F 332 UNP P0DTC2 EXPRESSION TAG SEQADV 7F5R PHE F 453 UNP P0DTC2 TYR 453 VARIANT SEQADV 7F5R HIS F 528 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 597 SER THR THR GLU ASP LEU ALA LYS THR PHE LEU GLU LYS SEQRES 2 A 597 PHE ASN TYR GLU ALA GLU GLU LEU SER TYR GLN ASN SER SEQRES 3 A 597 LEU ALA SER TRP ASN TYR ASN THR ASN ILE THR ASP GLU SEQRES 4 A 597 ASN ILE GLN LYS MET ASN ILE ALA GLY ALA LYS TRP SER SEQRES 5 A 597 ALA PHE TYR GLU GLU GLU SER GLN HIS ALA LYS THR TYR SEQRES 6 A 597 PRO LEU GLU GLU ILE GLN ASP PRO ILE ILE LYS ARG GLN SEQRES 7 A 597 LEU ARG ALA LEU GLN GLN SER GLY SER SER VAL LEU SER SEQRES 8 A 597 ALA ASP LYS ARG GLU ARG LEU ASN THR ILE LEU ASN ALA SEQRES 9 A 597 MET SER THR ILE TYR SER THR GLY LYS ALA CYS ASN PRO SEQRES 10 A 597 ASN ASN PRO GLN GLU CYS LEU LEU LEU GLU PRO GLY LEU SEQRES 11 A 597 ASP ASP ILE MET GLU ASN SER LYS ASP TYR ASN GLU ARG SEQRES 12 A 597 LEU TRP ALA TRP GLU GLY TRP ARG SER GLU VAL GLY LYS SEQRES 13 A 597 GLN LEU ARG PRO LEU TYR GLU GLU TYR VAL ALA LEU LYS SEQRES 14 A 597 ASN GLU MET ALA ARG ALA ASN ASN TYR GLU ASP TYR GLY SEQRES 15 A 597 ASP TYR TRP ARG GLY ASP TYR GLU GLU GLU TRP ALA ASP SEQRES 16 A 597 GLY TYR ASN TYR SER ARG ASN GLN LEU ILE GLU ASP VAL SEQRES 17 A 597 GLU HIS THR PHE THR GLN ILE LYS PRO LEU TYR GLU HIS SEQRES 18 A 597 LEU HIS ALA TYR VAL ARG ALA LYS LEU MET ASP ALA TYR SEQRES 19 A 597 PRO SER ARG ILE SER PRO THR GLY CYS LEU PRO ALA HIS SEQRES 20 A 597 LEU LEU GLY ASP MET TRP GLY ARG PHE TRP THR ASN LEU SEQRES 21 A 597 TYR PRO LEU MET VAL PRO PHE GLY GLN LYS PRO ASN ILE SEQRES 22 A 597 ASP VAL THR ASP ALA MET VAL ASN GLN SER TRP ASP ALA SEQRES 23 A 597 ARG ARG ILE PHE GLU GLU ALA GLU LYS PHE PHE VAL SER SEQRES 24 A 597 VAL GLY LEU PRO ASN MET THR GLU GLY PHE TRP GLN ASN SEQRES 25 A 597 SER MET LEU THR GLU PRO GLY ASP ASN ARG LYS VAL VAL SEQRES 26 A 597 CYS HIS PRO THR ALA TRP ASP LEU GLY LYS HIS ASP PHE SEQRES 27 A 597 ARG ILE LYS MET CYS THR LYS VAL THR MET ASP ASP PHE SEQRES 28 A 597 LEU THR ALA HIS HIS GLU MET GLY HIS ILE GLN TYR ASP SEQRES 29 A 597 MET ALA TYR ALA ALA GLN PRO PHE LEU LEU ARG ASN GLY SEQRES 30 A 597 ALA ASN GLU GLY PHE HIS GLU ALA VAL GLY GLU ILE MET SEQRES 31 A 597 SER LEU SER ALA ALA THR PRO ASN HIS LEU LYS ASN ILE SEQRES 32 A 597 GLY LEU LEU PRO PRO ASP PHE SER GLU ASP SER GLU THR SEQRES 33 A 597 ASP ILE ASN PHE LEU LEU LYS GLN ALA LEU THR ILE VAL SEQRES 34 A 597 GLY THR LEU PRO PHE THR TYR MET LEU GLU LYS TRP ARG SEQRES 35 A 597 TRP MET VAL PHE LYS GLY GLU ILE PRO LYS GLU GLN TRP SEQRES 36 A 597 MET GLN LYS TRP TRP GLU MET LYS ARG ASP ILE VAL GLY SEQRES 37 A 597 VAL VAL GLU PRO LEU PRO HIS ASP GLU THR TYR CYS ASP SEQRES 38 A 597 PRO ALA ALA LEU PHE HIS VAL ALA ASN ASP TYR SER PHE SEQRES 39 A 597 ILE ARG TYR TYR THR ARG THR ILE TYR GLN PHE GLN PHE SEQRES 40 A 597 GLN GLU ALA LEU CYS GLN ILE ALA LYS HIS GLU GLY PRO SEQRES 41 A 597 LEU TYR LYS CYS ASP ILE SER ASN SER ARG GLU ALA GLY SEQRES 42 A 597 GLN LYS LEU HIS GLU MET LEU SER LEU GLY ARG SER LYS SEQRES 43 A 597 PRO TRP THR PHE ALA LEU GLU ARG VAL VAL GLY ALA LYS SEQRES 44 A 597 THR MET ASP VAL ARG PRO LEU LEU ASN TYR PHE GLU PRO SEQRES 45 A 597 LEU PHE THR TRP LEU LYS GLU GLN ASN ARG ASN SER PHE SEQRES 46 A 597 VAL GLY TRP ASN THR ASP TRP SER PRO TYR ALA ASP SEQRES 1 E 197 PRO THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 2 E 197 THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 3 E 197 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 4 E 197 SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 5 E 197 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 6 E 197 ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN SEQRES 7 E 197 ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN SEQRES 8 E 197 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 9 E 197 TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN SEQRES 10 E 197 TYR ASN TYR LEU PHE ARG LEU PHE ARG LYS SER ASN LEU SEQRES 11 E 197 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 12 E 197 ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN SEQRES 13 E 197 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR SEQRES 14 E 197 ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 15 E 197 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 16 E 197 PRO HIS SEQRES 1 B 597 SER THR THR GLU ASP LEU ALA LYS THR PHE LEU GLU LYS SEQRES 2 B 597 PHE ASN TYR GLU ALA GLU GLU LEU SER TYR GLN ASN SER SEQRES 3 B 597 LEU ALA SER TRP ASN TYR ASN THR ASN ILE THR ASP GLU SEQRES 4 B 597 ASN ILE GLN LYS MET ASN ILE ALA GLY ALA LYS TRP SER SEQRES 5 B 597 ALA PHE TYR GLU GLU GLU SER GLN HIS ALA LYS THR TYR SEQRES 6 B 597 PRO LEU GLU GLU ILE GLN ASP PRO ILE ILE LYS ARG GLN SEQRES 7 B 597 LEU ARG ALA LEU GLN GLN SER GLY SER SER VAL LEU SER SEQRES 8 B 597 ALA ASP LYS ARG GLU ARG LEU ASN THR ILE LEU ASN ALA SEQRES 9 B 597 MET SER THR ILE TYR SER THR GLY LYS ALA CYS ASN PRO SEQRES 10 B 597 ASN ASN PRO GLN GLU CYS LEU LEU LEU GLU PRO GLY LEU SEQRES 11 B 597 ASP ASP ILE MET GLU ASN SER LYS ASP TYR ASN GLU ARG SEQRES 12 B 597 LEU TRP ALA TRP GLU GLY TRP ARG SER GLU VAL GLY LYS SEQRES 13 B 597 GLN LEU ARG PRO LEU TYR GLU GLU TYR VAL ALA LEU LYS SEQRES 14 B 597 ASN GLU MET ALA ARG ALA ASN ASN TYR GLU ASP TYR GLY SEQRES 15 B 597 ASP TYR TRP ARG GLY ASP TYR GLU GLU GLU TRP ALA ASP SEQRES 16 B 597 GLY TYR ASN TYR SER ARG ASN GLN LEU ILE GLU ASP VAL SEQRES 17 B 597 GLU HIS THR PHE THR GLN ILE LYS PRO LEU TYR GLU HIS SEQRES 18 B 597 LEU HIS ALA TYR VAL ARG ALA LYS LEU MET ASP ALA TYR SEQRES 19 B 597 PRO SER ARG ILE SER PRO THR GLY CYS LEU PRO ALA HIS SEQRES 20 B 597 LEU LEU GLY ASP MET TRP GLY ARG PHE TRP THR ASN LEU SEQRES 21 B 597 TYR PRO LEU MET VAL PRO PHE GLY GLN LYS PRO ASN ILE SEQRES 22 B 597 ASP VAL THR ASP ALA MET VAL ASN GLN SER TRP ASP ALA SEQRES 23 B 597 ARG ARG ILE PHE GLU GLU ALA GLU LYS PHE PHE VAL SER SEQRES 24 B 597 VAL GLY LEU PRO ASN MET THR GLU GLY PHE TRP GLN ASN SEQRES 25 B 597 SER MET LEU THR GLU PRO GLY ASP ASN ARG LYS VAL VAL SEQRES 26 B 597 CYS HIS PRO THR ALA TRP ASP LEU GLY LYS HIS ASP PHE SEQRES 27 B 597 ARG ILE LYS MET CYS THR LYS VAL THR MET ASP ASP PHE SEQRES 28 B 597 LEU THR ALA HIS HIS GLU MET GLY HIS ILE GLN TYR ASP SEQRES 29 B 597 MET ALA TYR ALA ALA GLN PRO PHE LEU LEU ARG ASN GLY SEQRES 30 B 597 ALA ASN GLU GLY PHE HIS GLU ALA VAL GLY GLU ILE MET SEQRES 31 B 597 SER LEU SER ALA ALA THR PRO ASN HIS LEU LYS ASN ILE SEQRES 32 B 597 GLY LEU LEU PRO PRO ASP PHE SER GLU ASP SER GLU THR SEQRES 33 B 597 ASP ILE ASN PHE LEU LEU LYS GLN ALA LEU THR ILE VAL SEQRES 34 B 597 GLY THR LEU PRO PHE THR TYR MET LEU GLU LYS TRP ARG SEQRES 35 B 597 TRP MET VAL PHE LYS GLY GLU ILE PRO LYS GLU GLN TRP SEQRES 36 B 597 MET GLN LYS TRP TRP GLU MET LYS ARG ASP ILE VAL GLY SEQRES 37 B 597 VAL VAL GLU PRO LEU PRO HIS ASP GLU THR TYR CYS ASP SEQRES 38 B 597 PRO ALA ALA LEU PHE HIS VAL ALA ASN ASP TYR SER PHE SEQRES 39 B 597 ILE ARG TYR TYR THR ARG THR ILE TYR GLN PHE GLN PHE SEQRES 40 B 597 GLN GLU ALA LEU CYS GLN ILE ALA LYS HIS GLU GLY PRO SEQRES 41 B 597 LEU TYR LYS CYS ASP ILE SER ASN SER ARG GLU ALA GLY SEQRES 42 B 597 GLN LYS LEU HIS GLU MET LEU SER LEU GLY ARG SER LYS SEQRES 43 B 597 PRO TRP THR PHE ALA LEU GLU ARG VAL VAL GLY ALA LYS SEQRES 44 B 597 THR MET ASP VAL ARG PRO LEU LEU ASN TYR PHE GLU PRO SEQRES 45 B 597 LEU PHE THR TRP LEU LYS GLU GLN ASN ARG ASN SER PHE SEQRES 46 B 597 VAL GLY TRP ASN THR ASP TRP SER PRO TYR ALA ASP SEQRES 1 C 197 PRO THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 2 C 197 THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 3 C 197 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 4 C 197 SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 5 C 197 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 6 C 197 ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN SEQRES 7 C 197 ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN SEQRES 8 C 197 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 9 C 197 TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN SEQRES 10 C 197 TYR ASN TYR LEU PHE ARG LEU PHE ARG LYS SER ASN LEU SEQRES 11 C 197 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 12 C 197 ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN SEQRES 13 C 197 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR SEQRES 14 C 197 ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 15 C 197 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 16 C 197 PRO HIS SEQRES 1 D 597 SER THR THR GLU ASP LEU ALA LYS THR PHE LEU GLU LYS SEQRES 2 D 597 PHE ASN TYR GLU ALA GLU GLU LEU SER TYR GLN ASN SER SEQRES 3 D 597 LEU ALA SER TRP ASN TYR ASN THR ASN ILE THR ASP GLU SEQRES 4 D 597 ASN ILE GLN LYS MET ASN ILE ALA GLY ALA LYS TRP SER SEQRES 5 D 597 ALA PHE TYR GLU GLU GLU SER GLN HIS ALA LYS THR TYR SEQRES 6 D 597 PRO LEU GLU GLU ILE GLN ASP PRO ILE ILE LYS ARG GLN SEQRES 7 D 597 LEU ARG ALA LEU GLN GLN SER GLY SER SER VAL LEU SER SEQRES 8 D 597 ALA ASP LYS ARG GLU ARG LEU ASN THR ILE LEU ASN ALA SEQRES 9 D 597 MET SER THR ILE TYR SER THR GLY LYS ALA CYS ASN PRO SEQRES 10 D 597 ASN ASN PRO GLN GLU CYS LEU LEU LEU GLU PRO GLY LEU SEQRES 11 D 597 ASP ASP ILE MET GLU ASN SER LYS ASP TYR ASN GLU ARG SEQRES 12 D 597 LEU TRP ALA TRP GLU GLY TRP ARG SER GLU VAL GLY LYS SEQRES 13 D 597 GLN LEU ARG PRO LEU TYR GLU GLU TYR VAL ALA LEU LYS SEQRES 14 D 597 ASN GLU MET ALA ARG ALA ASN ASN TYR GLU ASP TYR GLY SEQRES 15 D 597 ASP TYR TRP ARG GLY ASP TYR GLU GLU GLU TRP ALA ASP SEQRES 16 D 597 GLY TYR ASN TYR SER ARG ASN GLN LEU ILE GLU ASP VAL SEQRES 17 D 597 GLU HIS THR PHE THR GLN ILE LYS PRO LEU TYR GLU HIS SEQRES 18 D 597 LEU HIS ALA TYR VAL ARG ALA LYS LEU MET ASP ALA TYR SEQRES 19 D 597 PRO SER ARG ILE SER PRO THR GLY CYS LEU PRO ALA HIS SEQRES 20 D 597 LEU LEU GLY ASP MET TRP GLY ARG PHE TRP THR ASN LEU SEQRES 21 D 597 TYR PRO LEU MET VAL PRO PHE GLY GLN LYS PRO ASN ILE SEQRES 22 D 597 ASP VAL THR ASP ALA MET VAL ASN GLN SER TRP ASP ALA SEQRES 23 D 597 ARG ARG ILE PHE GLU GLU ALA GLU LYS PHE PHE VAL SER SEQRES 24 D 597 VAL GLY LEU PRO ASN MET THR GLU GLY PHE TRP GLN ASN SEQRES 25 D 597 SER MET LEU THR GLU PRO GLY ASP ASN ARG LYS VAL VAL SEQRES 26 D 597 CYS HIS PRO THR ALA TRP ASP LEU GLY LYS HIS ASP PHE SEQRES 27 D 597 ARG ILE LYS MET CYS THR LYS VAL THR MET ASP ASP PHE SEQRES 28 D 597 LEU THR ALA HIS HIS GLU MET GLY HIS ILE GLN TYR ASP SEQRES 29 D 597 MET ALA TYR ALA ALA GLN PRO PHE LEU LEU ARG ASN GLY SEQRES 30 D 597 ALA ASN GLU GLY PHE HIS GLU ALA VAL GLY GLU ILE MET SEQRES 31 D 597 SER LEU SER ALA ALA THR PRO ASN HIS LEU LYS ASN ILE SEQRES 32 D 597 GLY LEU LEU PRO PRO ASP PHE SER GLU ASP SER GLU THR SEQRES 33 D 597 ASP ILE ASN PHE LEU LEU LYS GLN ALA LEU THR ILE VAL SEQRES 34 D 597 GLY THR LEU PRO PHE THR TYR MET LEU GLU LYS TRP ARG SEQRES 35 D 597 TRP MET VAL PHE LYS GLY GLU ILE PRO LYS GLU GLN TRP SEQRES 36 D 597 MET GLN LYS TRP TRP GLU MET LYS ARG ASP ILE VAL GLY SEQRES 37 D 597 VAL VAL GLU PRO LEU PRO HIS ASP GLU THR TYR CYS ASP SEQRES 38 D 597 PRO ALA ALA LEU PHE HIS VAL ALA ASN ASP TYR SER PHE SEQRES 39 D 597 ILE ARG TYR TYR THR ARG THR ILE TYR GLN PHE GLN PHE SEQRES 40 D 597 GLN GLU ALA LEU CYS GLN ILE ALA LYS HIS GLU GLY PRO SEQRES 41 D 597 LEU TYR LYS CYS ASP ILE SER ASN SER ARG GLU ALA GLY SEQRES 42 D 597 GLN LYS LEU HIS GLU MET LEU SER LEU GLY ARG SER LYS SEQRES 43 D 597 PRO TRP THR PHE ALA LEU GLU ARG VAL VAL GLY ALA LYS SEQRES 44 D 597 THR MET ASP VAL ARG PRO LEU LEU ASN TYR PHE GLU PRO SEQRES 45 D 597 LEU PHE THR TRP LEU LYS GLU GLN ASN ARG ASN SER PHE SEQRES 46 D 597 VAL GLY TRP ASN THR ASP TRP SER PRO TYR ALA ASP SEQRES 1 F 197 PRO THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 2 F 197 THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 3 F 197 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 4 F 197 SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 5 F 197 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 6 F 197 ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN SEQRES 7 F 197 ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN SEQRES 8 F 197 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 9 F 197 TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN SEQRES 10 F 197 TYR ASN TYR LEU PHE ARG LEU PHE ARG LYS SER ASN LEU SEQRES 11 F 197 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 12 F 197 ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN SEQRES 13 F 197 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR SEQRES 14 F 197 ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 15 F 197 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 16 F 197 PRO HIS HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET FUC H 2 10 HET NAG I 1 14 HET NAG I 2 14 HET NAG A 903 14 HET NAG E 601 14 HET NAG B 903 14 HET NAG B 904 14 HET NAG B 905 14 HET NAG D 903 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 7 NAG 11(C8 H15 N O6) FORMUL 8 FUC C6 H12 O5 HELIX 1 AA1 THR A 20 THR A 52 1 33 HELIX 2 AA2 THR A 55 LYS A 81 1 27 HELIX 3 AA3 THR A 82 TYR A 83 5 2 HELIX 4 AA4 PRO A 84 ILE A 88 5 5 HELIX 5 AA5 ASP A 90 GLN A 102 1 13 HELIX 6 AA6 SER A 109 GLY A 130 1 22 HELIX 7 AA7 PRO A 146 SER A 155 1 10 HELIX 8 AA8 ASP A 157 ASN A 194 1 38 HELIX 9 AA9 ASP A 198 GLY A 205 1 8 HELIX 10 AB1 ASP A 206 GLU A 208 5 3 HELIX 11 AB2 SER A 218 TYR A 252 1 35 HELIX 12 AB3 HIS A 265 LEU A 267 5 3 HELIX 13 AB4 PHE A 274 MET A 282 5 9 HELIX 14 AB5 VAL A 293 GLN A 300 1 8 HELIX 15 AB6 ASP A 303 VAL A 318 1 16 HELIX 16 AB7 THR A 324 SER A 331 1 8 HELIX 17 AB8 THR A 365 TYR A 385 1 21 HELIX 18 AB9 PRO A 389 ARG A 393 5 5 HELIX 19 AC1 GLY A 399 THR A 414 1 16 HELIX 20 AC2 THR A 414 ILE A 421 1 8 HELIX 21 AC3 ASP A 431 GLY A 466 1 36 HELIX 22 AC4 PRO A 469 GLU A 471 5 3 HELIX 23 AC5 GLN A 472 GLY A 486 1 15 HELIX 24 AC6 CYS A 498 ALA A 502 5 5 HELIX 25 AC7 LEU A 503 ASN A 508 1 6 HELIX 26 AC8 ILE A 513 ALA A 632 1 21 HELIX 27 AC9 SER A 646 SER A 658 1 13 HELIX 28 AD1 PRO A 664 GLY A 674 1 11 HELIX 29 AD2 VAL A 680 ASN A 698 1 19 HELIX 30 AD3 PHE E 338 ASN E 343 1 6 HELIX 31 AD4 SER E 349 TRP E 353 5 5 HELIX 32 AD5 SER E 383 LEU E 390 5 8 HELIX 33 AD6 GLY E 404 ARG E 408 1 5 HELIX 34 AD7 GLY E 416 ASN E 422 1 7 HELIX 35 AD8 SER E 438 SER E 443 1 6 HELIX 36 AD9 GLY E 502 TYR E 505 5 4 HELIX 37 AE1 THR B 20 ASN B 53 1 34 HELIX 38 AE2 THR B 55 LYS B 81 1 27 HELIX 39 AE3 THR B 82 TYR B 83 5 2 HELIX 40 AE4 PRO B 84 ILE B 88 5 5 HELIX 41 AE5 ASP B 90 GLN B 102 1 13 HELIX 42 AE6 SER B 103 LEU B 108 5 6 HELIX 43 AE7 SER B 109 THR B 129 1 21 HELIX 44 AE8 PRO B 146 SER B 155 1 10 HELIX 45 AE9 ASP B 157 ALA B 193 1 37 HELIX 46 AF1 ASP B 198 GLY B 205 1 8 HELIX 47 AF2 ASP B 206 GLU B 208 5 3 HELIX 48 AF3 SER B 218 TYR B 252 1 35 HELIX 49 AF4 HIS B 265 LEU B 267 5 3 HELIX 50 AF5 TRP B 275 MET B 282 5 8 HELIX 51 AF6 VAL B 293 GLN B 300 1 8 HELIX 52 AF7 ASP B 303 VAL B 318 1 16 HELIX 53 AF8 THR B 324 SER B 331 1 8 HELIX 54 AF9 THR B 365 TYR B 385 1 21 HELIX 55 AG1 PRO B 389 ARG B 393 5 5 HELIX 56 AG2 GLY B 399 ALA B 413 1 15 HELIX 57 AG3 THR B 414 ILE B 421 1 8 HELIX 58 AG4 ASP B 431 GLY B 466 1 36 HELIX 59 AG5 PRO B 469 GLU B 471 5 3 HELIX 60 AG6 GLN B 472 ILE B 484 1 13 HELIX 61 AG7 CYS B 498 ALA B 502 5 5 HELIX 62 AG8 LEU B 503 ASN B 508 1 6 HELIX 63 AG9 ILE B 513 ALA B 533 1 21 HELIX 64 AH1 PRO B 538 CYS B 542 5 5 HELIX 65 AH2 SER B 547 SER B 559 1 13 HELIX 66 AH3 PRO B 565 GLY B 575 1 11 HELIX 67 AH4 VAL B 581 PHE B 588 1 8 HELIX 68 AH5 PHE B 588 ASN B 599 1 12 HELIX 69 AH6 PRO C 337 ASN C 343 1 7 HELIX 70 AH7 SER C 349 TRP C 353 5 5 HELIX 71 AH8 SER C 383 ASP C 389 5 7 HELIX 72 AH9 ASP C 405 ILE C 410 5 6 HELIX 73 AI1 GLY C 416 ASN C 422 1 7 HELIX 74 AI2 SER C 438 SER C 443 1 6 HELIX 75 AI3 GLY C 502 TYR C 505 5 4 HELIX 76 AI4 THR D 20 THR D 52 1 33 HELIX 77 AI5 THR D 55 LYS D 81 1 27 HELIX 78 AI6 THR D 82 TYR D 83 5 2 HELIX 79 AI7 PRO D 84 ILE D 88 5 5 HELIX 80 AI8 ASP D 90 GLN D 102 1 13 HELIX 81 AI9 GLY D 104 LEU D 108 5 5 HELIX 82 AJ1 SER D 109 THR D 129 1 21 HELIX 83 AJ2 PRO D 146 SER D 155 1 10 HELIX 84 AJ3 ASP D 157 ASN D 194 1 38 HELIX 85 AJ4 ASP D 198 GLY D 205 1 8 HELIX 86 AJ5 ASP D 206 GLU D 208 5 3 HELIX 87 AJ6 SER D 218 TYR D 252 1 35 HELIX 88 AJ7 HIS D 265 LEU D 267 5 3 HELIX 89 AJ8 PHE D 274 VAL D 283 5 10 HELIX 90 AJ9 VAL D 293 GLN D 300 1 8 HELIX 91 AK1 ASP D 303 VAL D 318 1 16 HELIX 92 AK2 THR D 324 SER D 331 1 8 HELIX 93 AK3 THR D 365 TYR D 385 1 21 HELIX 94 AK4 PRO D 389 ARG D 393 5 5 HELIX 95 AK5 GLY D 399 THR D 414 1 16 HELIX 96 AK6 THR D 414 ILE D 421 1 8 HELIX 97 AK7 ASP D 431 ILE D 446 1 16 HELIX 98 AK8 GLY D 448 LYS D 465 1 18 HELIX 99 AK9 PRO D 469 GLU D 471 5 3 HELIX 100 AL1 GLN D 472 ILE D 484 1 13 HELIX 101 AL2 CYS D 498 ALA D 502 5 5 HELIX 102 AL3 LEU D 503 ASN D 508 1 6 HELIX 103 AL4 ILE D 513 ALA D 533 1 21 HELIX 104 AL5 PRO D 538 CYS D 542 5 5 HELIX 105 AL6 SER D 547 SER D 559 1 13 HELIX 106 AL7 PRO D 565 GLY D 575 1 11 HELIX 107 AL8 VAL D 581 ASN D 599 1 19 HELIX 108 AL9 ARG D 600 SER D 602 5 3 HELIX 109 AM1 PHE F 338 ASN F 343 1 6 HELIX 110 AM2 SER F 349 TRP F 353 5 5 HELIX 111 AM3 ASP F 364 SER F 371 1 8 HELIX 112 AM4 THR F 385 ASP F 389 5 5 HELIX 113 AM5 ASP F 405 ILE F 410 5 6 HELIX 114 AM6 GLY F 416 ASN F 422 1 7 HELIX 115 AM7 SER F 438 SER F 443 1 6 HELIX 116 AM8 GLY F 502 TYR F 505 5 4 SHEET 1 AA1 2 LYS A 131 ASN A 134 0 SHEET 2 AA1 2 ASN A 137 LEU A 143 -1 O LEU A 142 N ALA A 132 SHEET 1 AA2 2 LEU A 262 PRO A 263 0 SHEET 2 AA2 2 VAL A 487 VAL A 488 1 O VAL A 488 N LEU A 262 SHEET 1 AA3 2 THR A 347 GLY A 352 0 SHEET 2 AA3 2 ASP A 355 LYS A 359 -1 O LYS A 359 N THR A 347 SHEET 1 AA410 ASN E 354 ILE E 358 0 SHEET 2 AA410 ASN E 394 ARG E 403 -1 O ALA E 397 N LYS E 356 SHEET 3 AA410 PRO E 507 GLU E 516 -1 O VAL E 512 N ASP E 398 SHEET 4 AA410 GLY E 431 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AA410 THR E 376 CYS E 379 -1 N LYS E 378 O VAL E 433 SHEET 6 AA410 THR C 376 TYR C 380 -1 O CYS C 379 N PHE E 377 SHEET 7 AA410 GLY C 431 ASN C 437 -1 O VAL C 433 N LYS C 378 SHEET 8 AA410 PRO C 507 GLU C 516 -1 O VAL C 511 N ILE C 434 SHEET 9 AA410 ASN C 394 ARG C 403 -1 N ILE C 402 O TYR C 508 SHEET 10 AA410 ASN C 354 ILE C 358 -1 N ILE C 358 O VAL C 395 SHEET 1 AA5 2 CYS E 361 VAL E 362 0 SHEET 2 AA5 2 VAL E 524 CYS E 525 1 O CYS E 525 N CYS E 361 SHEET 1 AA6 2 LEU E 452 ARG E 454 0 SHEET 2 AA6 2 LEU E 492 SER E 494 -1 O GLN E 493 N PHE E 453 SHEET 1 AA7 2 TYR E 473 GLN E 474 0 SHEET 2 AA7 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SHEET 1 AA8 2 LYS B 131 CYS B 133 0 SHEET 2 AA8 2 CYS B 141 LEU B 143 -1 O LEU B 142 N ALA B 132 SHEET 1 AA9 2 LEU B 262 PRO B 263 0 SHEET 2 AA9 2 VAL B 487 VAL B 488 1 O VAL B 488 N LEU B 262 SHEET 1 AB1 2 THR B 347 GLY B 352 0 SHEET 2 AB1 2 ASP B 355 LYS B 359 -1 O ARG B 357 N TRP B 349 SHEET 1 AB2 3 CYS C 361 VAL C 362 0 SHEET 2 AB2 3 VAL C 524 CYS C 525 1 O CYS C 525 N CYS C 361 SHEET 3 AB2 3 CYS C 391 PHE C 392 -1 N PHE C 392 O VAL C 524 SHEET 1 AB3 2 LEU C 452 ARG C 454 0 SHEET 2 AB3 2 LEU C 492 SER C 494 -1 O GLN C 493 N PHE C 453 SHEET 1 AB4 2 TYR C 473 GLN C 474 0 SHEET 2 AB4 2 CYS C 488 TYR C 489 -1 O TYR C 489 N TYR C 473 SHEET 1 AB5 2 LYS D 131 CYS D 133 0 SHEET 2 AB5 2 CYS D 141 LEU D 143 -1 O LEU D 142 N ALA D 132 SHEET 1 AB6 2 LEU D 262 PRO D 263 0 SHEET 2 AB6 2 VAL D 487 VAL D 488 1 O VAL D 488 N LEU D 262 SHEET 1 AB7 2 THR D 347 GLY D 352 0 SHEET 2 AB7 2 ASP D 355 LYS D 359 -1 O ASP D 355 N GLY D 352 SHEET 1 AB8 5 ASN F 354 ILE F 358 0 SHEET 2 AB8 5 ASN F 394 ARG F 403 -1 O VAL F 395 N ILE F 358 SHEET 3 AB8 5 PRO F 507 GLU F 516 -1 O TYR F 508 N ILE F 402 SHEET 4 AB8 5 GLY F 431 ASN F 437 -1 N ILE F 434 O VAL F 511 SHEET 5 AB8 5 THR F 376 TYR F 380 -1 N TYR F 380 O GLY F 431 SHEET 1 AB9 3 CYS F 361 VAL F 362 0 SHEET 2 AB9 3 VAL F 524 CYS F 525 1 O CYS F 525 N CYS F 361 SHEET 3 AB9 3 CYS F 391 PHE F 392 -1 N PHE F 392 O VAL F 524 SHEET 1 AC1 2 LEU F 452 ARG F 454 0 SHEET 2 AC1 2 LEU F 492 SER F 494 -1 O GLN F 493 N PHE F 453 SHEET 1 AC2 2 TYR F 473 GLN F 474 0 SHEET 2 AC2 2 CYS F 488 TYR F 489 -1 O TYR F 489 N TYR F 473 SSBOND 1 CYS A 133 CYS A 141 1555 1555 2.05 SSBOND 2 CYS A 344 CYS A 361 1555 1555 2.05 SSBOND 3 CYS A 629 CYS A 641 1555 1555 2.03 SSBOND 4 CYS E 336 CYS E 361 1555 1555 2.04 SSBOND 5 CYS E 379 CYS E 432 1555 1555 2.08 SSBOND 6 CYS E 480 CYS E 488 1555 1555 2.08 SSBOND 7 CYS B 133 CYS B 141 1555 1555 2.05 SSBOND 8 CYS B 344 CYS B 361 1555 1555 2.05 SSBOND 9 CYS B 530 CYS B 542 1555 1555 2.03 SSBOND 10 CYS C 336 CYS C 361 1555 1555 2.04 SSBOND 11 CYS C 379 CYS C 432 1555 1555 2.06 SSBOND 12 CYS C 391 CYS C 525 1555 1555 2.04 SSBOND 13 CYS C 480 CYS C 488 1555 1555 2.09 SSBOND 14 CYS D 133 CYS D 141 1555 1555 2.05 SSBOND 15 CYS D 344 CYS D 361 1555 1555 2.04 SSBOND 16 CYS D 530 CYS D 542 1555 1555 2.03 SSBOND 17 CYS F 336 CYS F 361 1555 1555 2.04 SSBOND 18 CYS F 379 CYS F 432 1555 1555 2.07 SSBOND 19 CYS F 391 CYS F 525 1555 1555 2.05 SSBOND 20 CYS F 480 CYS F 488 1555 1555 2.06 LINK ND2 ASN A 53 C1 NAG A 903 1555 1555 1.45 LINK ND2 ASN A 216 C1 NAG H 1 1555 1555 1.47 LINK ND2 ASN A 322 C1 NAG G 1 1555 1555 1.42 LINK ND2 ASN E 343 C1 NAG E 601 1555 1555 1.49 LINK ND2 ASN B 53 C1 NAG B 904 1555 1555 1.45 LINK ND2 ASN B 216 C1 NAG B 905 1555 1555 1.48 LINK ND2 ASN B 322 C1 NAG B 903 1555 1555 1.47 LINK ND2 ASN D 53 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN D 322 C1 NAG D 903 1555 1555 1.48 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.46 LINK O6 NAG H 1 C1 FUC H 2 1555 1555 1.46 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.46 CRYST1 290.185 130.185 136.887 90.00 90.00 90.00 P 21 21 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003446 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007681 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007305 0.00000