HEADER DNA BINDING PROTEIN 01-JUL-21 7F84 TITLE CRYSTAL STRUCTURE OF CRISPR-ASSOCIATED CAS2C OF LEPTOSPIRA INTERROGANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRISPR-ASSOCIATED ENDORIBONUCLEASE CAS2; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEPTOSPIRA INTERROGANS SEROVAR COPENHAGENI STR. SOURCE 3 FIOCRUZ L1-130; SOURCE 4 ORGANISM_TAXID: 267671; SOURCE 5 STRAIN: FIOCRUZ L1-130; SOURCE 6 GENE: CAS2, LIC_12917; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PCDF1B KEYWDS LEPTOSPIRA, CAS2, LINCAS2C, CRISPR-CAS IC, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.GOGOI,V.ANAND,H.S.PRABHAKARAN,M.KUMAR,S.P.KANAUJIA REVDAT 3 29-NOV-23 7F84 1 REMARK REVDAT 2 18-JAN-23 7F84 1 JRNL REVDAT 1 06-JUL-22 7F84 0 JRNL AUTH V.ANAND,H.S.PRABHAKARAN,P.GOGOI,S.P.KANAUJIA,M.KUMAR JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF CAS2 OF JRNL TITL 2 CRISPR-CAS SUBTYPE I-C LACKING THE CRISPR COMPONENT. JRNL REF FRONT MOL BIOSCI V. 9 88569 2022 JRNL REFN ESSN 2296-889X JRNL PMID 36172044 JRNL DOI 10.3389/FMOLB.2022.988569 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 7993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 395 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 593 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2790 REMARK 3 BIN FREE R VALUE SET COUNT : 18 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1422 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 51 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.79000 REMARK 3 B22 (A**2) : -1.79000 REMARK 3 B33 (A**2) : 3.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.469 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.307 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.220 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.105 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.875 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1452 ; 0.013 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1442 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1949 ; 1.869 ; 1.642 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3326 ; 1.335 ; 1.589 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 178 ; 8.866 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 76 ;38.159 ;22.632 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 288 ;20.959 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;23.748 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 199 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1605 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 327 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A -1 87 B -1 87 2442 0.150 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 87 REMARK 3 ORIGIN FOR THE GROUP (A): -11.3943 18.1680 -34.0842 REMARK 3 T TENSOR REMARK 3 T11: 0.0299 T22: 0.0221 REMARK 3 T33: 0.0919 T12: 0.0070 REMARK 3 T13: 0.0314 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 2.5199 L22: 2.0427 REMARK 3 L33: 3.2221 L12: 0.5124 REMARK 3 L13: 0.9351 L23: 0.2040 REMARK 3 S TENSOR REMARK 3 S11: -0.0028 S12: 0.0089 S13: -0.0986 REMARK 3 S21: -0.1770 S22: 0.0769 S23: -0.1746 REMARK 3 S31: -0.0080 S32: 0.0637 S33: -0.0741 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 87 REMARK 3 ORIGIN FOR THE GROUP (A): -17.8581 18.0871 -18.8062 REMARK 3 T TENSOR REMARK 3 T11: 0.1000 T22: 0.0601 REMARK 3 T33: 0.0756 T12: -0.0195 REMARK 3 T13: 0.0255 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.6799 L22: 4.9746 REMARK 3 L33: 2.0560 L12: -0.7844 REMARK 3 L13: 0.1913 L23: -0.6267 REMARK 3 S TENSOR REMARK 3 S11: 0.0174 S12: -0.2440 S13: -0.1248 REMARK 3 S21: 0.6176 S22: -0.0300 S23: 0.0575 REMARK 3 S31: -0.1232 S32: -0.0680 S33: 0.0126 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 7F84 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1300022996. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 7.3.0 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8390 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 72.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 16.80 REMARK 200 R MERGE (I) : 0.16200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 16.90 REMARK 200 R MERGE FOR SHELL (I) : 0.51600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 4QR0 REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS REMARK 200 COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3 M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE PH 5.6, 5% 2-PROPANOL, 20% PEG 4000, 0.2% LMA, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 51.58000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 51.58000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 48.65000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 51.58000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 51.58000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 48.65000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 51.58000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 51.58000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 48.65000 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 51.58000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 51.58000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 48.65000 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 51.58000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 51.58000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 48.65000 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 51.58000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 51.58000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 48.65000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 51.58000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 51.58000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 48.65000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 51.58000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 51.58000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 48.65000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 88 REMARK 465 ASP A 89 REMARK 465 PHE A 90 REMARK 465 LEU B 88 REMARK 465 ASP B 89 REMARK 465 PHE B 90 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 67 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 63 -52.48 -140.72 REMARK 500 THR B 63 -40.05 -140.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 83 VAL A 84 -144.53 REMARK 500 REMARK 500 REMARK: NULL DBREF 7F84 A 1 90 UNP Q72NB8 Q72NB8_LEPIC 1 90 DBREF 7F84 B 1 90 UNP Q72NB8 Q72NB8_LEPIC 1 90 SEQADV 7F84 ASP A -1 UNP Q72NB8 EXPRESSION TAG SEQADV 7F84 PRO A 0 UNP Q72NB8 EXPRESSION TAG SEQADV 7F84 ASP B -1 UNP Q72NB8 EXPRESSION TAG SEQADV 7F84 PRO B 0 UNP Q72NB8 EXPRESSION TAG SEQRES 1 A 92 ASP PRO MET PHE ILE ILE VAL CYS TYR ASP VAL GLU THR SEQRES 2 A 92 ILE THR GLN GLU GLY ARG ALA ARG LEU ARG LYS VAL ALA SEQRES 3 A 92 LYS THR CYS GLU SER HIS GLY GLN ARG VAL GLN LYS SER SEQRES 4 A 92 VAL PHE GLU CYS GLN LEU GLU PRO ALA ASP TYR LEU GLN SEQRES 5 A 92 PHE GLU ALA LYS LEU SER LYS ILE ILE ASN SER LYS THR SEQRES 6 A 92 ASP ASN LEU ARG ILE TYR SER LEU ASP ALA ILE SER VAL SEQRES 7 A 92 SER LYS ILE LYS GLN PHE GLY VAL SER ASN ILE LEU ASP SEQRES 8 A 92 PHE SEQRES 1 B 92 ASP PRO MET PHE ILE ILE VAL CYS TYR ASP VAL GLU THR SEQRES 2 B 92 ILE THR GLN GLU GLY ARG ALA ARG LEU ARG LYS VAL ALA SEQRES 3 B 92 LYS THR CYS GLU SER HIS GLY GLN ARG VAL GLN LYS SER SEQRES 4 B 92 VAL PHE GLU CYS GLN LEU GLU PRO ALA ASP TYR LEU GLN SEQRES 5 B 92 PHE GLU ALA LYS LEU SER LYS ILE ILE ASN SER LYS THR SEQRES 6 B 92 ASP ASN LEU ARG ILE TYR SER LEU ASP ALA ILE SER VAL SEQRES 7 B 92 SER LYS ILE LYS GLN PHE GLY VAL SER ASN ILE LEU ASP SEQRES 8 B 92 PHE HET GOL A 101 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *51(H2 O) HELIX 1 AA1 THR A 13 SER A 29 1 17 HELIX 2 AA2 GLU A 44 ALA A 46 5 3 HELIX 3 AA3 ASP A 47 ILE A 59 1 13 HELIX 4 AA4 ASP A 72 ILE A 74 5 3 HELIX 5 AA5 THR B 13 SER B 29 1 17 HELIX 6 AA6 GLU B 44 ILE B 59 1 16 HELIX 7 AA7 SER B 75 SER B 77 5 3 SHEET 1 AA1 5 GLY A 31 GLN A 35 0 SHEET 2 AA1 5 VAL A 38 LEU A 43 -1 O VAL A 38 N VAL A 34 SHEET 3 AA1 5 MET A 1 ASP A 8 -1 N ILE A 3 O CYS A 41 SHEET 4 AA1 5 ASN A 65 LEU A 71 -1 O LEU A 71 N PHE A 2 SHEET 5 AA1 5 ILE B 79 GLY B 83 -1 O LYS B 80 N ILE A 68 SHEET 1 AA2 5 VAL A 76 GLY A 83 0 SHEET 2 AA2 5 ASN B 65 LEU B 71 -1 O SER B 70 N LYS A 78 SHEET 3 AA2 5 MET B 1 ASP B 8 -1 N PHE B 2 O LEU B 71 SHEET 4 AA2 5 VAL B 38 LEU B 43 -1 O CYS B 41 N ILE B 3 SHEET 5 AA2 5 GLY B 31 GLN B 35 -1 N VAL B 34 O VAL B 38 CRYST1 103.160 103.160 97.300 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009694 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009694 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010277 0.00000