HEADER LIGASE 04-JUL-21 7F96 TITLE PLASMODIUM FALCIPARUM PROLYL-TRNA SYNTHETASE (PFPRS) IN COMPLEX WITH TITLE 2 L-PROLINE AND COMPOUND L95 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLINE--TRNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 254-746; COMPND 5 SYNONYM: PROLYL-TRNA SYNTHETASE,PRORS; COMPND 6 EC: 6.1.1.15; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM 3D7; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: PRORS, PFL0670C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM41 KEYWDS PROTEIN TRANSLATION, MALARIA, INHIBITOR, PRS, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR S.MISHRA,N.MALHOTRA,Y.MANICKAM,A.SHARMA REVDAT 1 04-JAN-23 7F96 0 JRNL AUTH S.MISHRA,N.MALHOTRA,Y.MANICKAM,A.SHARMA JRNL TITL PFPRS WITH ATP BINDING POCKET INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15RC2_3428 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 25486 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1273 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.5400 - 5.3552 1.00 2851 149 0.1552 0.1741 REMARK 3 2 5.3552 - 4.2524 1.00 2732 144 0.1263 0.1498 REMARK 3 3 4.2524 - 3.7153 1.00 2715 143 0.1382 0.1766 REMARK 3 4 3.7153 - 3.3759 1.00 2689 141 0.1621 0.2121 REMARK 3 5 3.3759 - 3.1340 1.00 2689 142 0.1781 0.2282 REMARK 3 6 3.1340 - 2.9493 1.00 2662 139 0.1759 0.2325 REMARK 3 7 2.9493 - 2.8016 1.00 2666 140 0.1927 0.2416 REMARK 3 8 2.8016 - 2.6797 1.00 2684 142 0.1882 0.2675 REMARK 3 9 2.6797 - 2.5770 0.95 2525 133 0.1969 0.2564 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7174 38.2380 -14.0804 REMARK 3 T TENSOR REMARK 3 T11: 0.4404 T22: 0.4369 REMARK 3 T33: 0.4155 T12: 0.0188 REMARK 3 T13: 0.0295 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 2.5101 L22: 1.2956 REMARK 3 L33: 2.2589 L12: 0.8493 REMARK 3 L13: 0.5124 L23: 0.0280 REMARK 3 S TENSOR REMARK 3 S11: -0.0165 S12: -0.0220 S13: 0.1969 REMARK 3 S21: 0.0573 S22: -0.1442 S23: -0.0118 REMARK 3 S31: 0.0241 S32: 0.1996 S33: 0.0868 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 339 THROUGH 532 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4454 32.9422 -5.9438 REMARK 3 T TENSOR REMARK 3 T11: 0.4235 T22: 0.3376 REMARK 3 T33: 0.4119 T12: 0.0004 REMARK 3 T13: 0.0281 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 1.8015 L22: 1.2072 REMARK 3 L33: 2.0485 L12: 0.6328 REMARK 3 L13: -0.0155 L23: 0.0193 REMARK 3 S TENSOR REMARK 3 S11: 0.0707 S12: -0.1262 S13: 0.0387 REMARK 3 S21: 0.2062 S22: -0.1055 S23: 0.1380 REMARK 3 S31: 0.1464 S32: -0.0491 S33: 0.0902 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 533 THROUGH 568 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6446 24.5992 -26.2574 REMARK 3 T TENSOR REMARK 3 T11: 0.6659 T22: 0.8582 REMARK 3 T33: 0.7465 T12: 0.2285 REMARK 3 T13: 0.1549 T23: 0.0702 REMARK 3 L TENSOR REMARK 3 L11: 1.6816 L22: 2.5750 REMARK 3 L33: 3.3156 L12: -0.2873 REMARK 3 L13: -0.6168 L23: 0.6540 REMARK 3 S TENSOR REMARK 3 S11: -0.3242 S12: 0.5134 S13: -0.2249 REMARK 3 S21: -0.9859 S22: -0.1968 S23: -0.5062 REMARK 3 S31: 0.0080 S32: 0.2639 S33: 0.2445 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 569 THROUGH 746 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1605 35.1887 -0.2146 REMARK 3 T TENSOR REMARK 3 T11: 0.4407 T22: 0.5295 REMARK 3 T33: 0.4567 T12: 0.0102 REMARK 3 T13: -0.1079 T23: 0.0846 REMARK 3 L TENSOR REMARK 3 L11: 1.8482 L22: 1.5502 REMARK 3 L33: 2.2622 L12: -0.1412 REMARK 3 L13: -1.1006 L23: 0.1335 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: -0.1444 S13: -0.0012 REMARK 3 S21: 0.1420 S22: -0.1185 S23: -0.2177 REMARK 3 S31: 0.1195 S32: 0.4760 S33: 0.1218 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7F96 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1300023096. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25534 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.577 REMARK 200 RESOLUTION RANGE LOW (A) : 48.542 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 19.50 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.5 REMARK 200 DATA REDUNDANCY IN SHELL : 17.10 REMARK 200 R MERGE FOR SHELL (I) : 0.81900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4YDQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M ALCOHOLS (0.2M 1,6-HEXANEDIOL, REMARK 280 0.2M 1-BUTANOL, 0.2M 1,2-PROPANEDIOL, 0.2M 2-PROPANOL, 0.2M 1,4- REMARK 280 BUTANEDIOL, 0.2M 1,3-PROPANEDIOL), 0.1 M BUFFER (TRIS (BASE); REMARK 280 BICINE) AND 30 % V/V PRECIPITANT MIX (40% V/V ETHYLENE GLYCOL; REMARK 280 20% W/V PEG 8000), PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.36000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.68000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.68000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 85.36000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -42.68000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 330 REMARK 465 HIS A 331 REMARK 465 ILE A 332 REMARK 465 GLU A 333 REMARK 465 GLY A 334 REMARK 465 GLN A 700 REMARK 465 THR A 701 REMARK 465 ASN A 702 REMARK 465 SER A 703 REMARK 465 GLU A 704 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 252 CG SD CE REMARK 470 LYS A 322 CE NZ REMARK 470 LYS A 324 CE NZ REMARK 470 GLU A 328 CG CD OE1 OE2 REMARK 470 LYS A 329 CG CD CE NZ REMARK 470 SER A 336 OG REMARK 470 GLU A 338 CG CD OE1 OE2 REMARK 470 ASP A 347 OD1 OD2 REMARK 470 GLU A 352 CG CD OE1 OE2 REMARK 470 GLN A 395 CG CD OE1 NE2 REMARK 470 LYS A 491 CE NZ REMARK 470 LYS A 501 CE NZ REMARK 470 TYR A 547 CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 548 CG CD CE NZ REMARK 470 THR A 550 OG1 CG2 REMARK 470 LYS A 647 CD CE NZ REMARK 470 LYS A 690 CE NZ REMARK 470 LYS A 691 CE NZ REMARK 470 LEU A 698 CG CD1 CD2 REMARK 470 ASN A 699 CG OD1 ND2 REMARK 470 THR A 705 OG1 CG2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 401 NE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 251 -125.81 43.30 REMARK 500 MET A 252 -135.36 -140.66 REMARK 500 ALA A 253 -167.55 57.13 REMARK 500 PHE A 399 -41.65 65.42 REMARK 500 ASN A 619 17.85 59.06 REMARK 500 LEU A 698 95.81 -58.39 REMARK 500 REMARK 500 REMARK: NULL DBREF 7F96 A 254 746 UNP Q8I5R7 SYP_PLAF7 254 746 SEQADV 7F96 GLY A 250 UNP Q8I5R7 EXPRESSION TAG SEQADV 7F96 ALA A 251 UNP Q8I5R7 EXPRESSION TAG SEQADV 7F96 MET A 252 UNP Q8I5R7 EXPRESSION TAG SEQADV 7F96 ALA A 253 UNP Q8I5R7 EXPRESSION TAG SEQRES 1 A 497 GLY ALA MET ALA ILE THR SER LYS LYS ILE GLU ASN PHE SEQRES 2 A 497 SER ASP TRP TYR THR GLN VAL ILE VAL LYS SER GLU LEU SEQRES 3 A 497 ILE GLU TYR TYR ASP ILE SER GLY CYS TYR ILE LEU ARG SEQRES 4 A 497 PRO ALA ALA TYR TYR ILE TRP GLU CYS VAL GLN ALA PHE SEQRES 5 A 497 PHE ASN LYS GLU ILE LYS LYS LEU ASN VAL GLU ASN SER SEQRES 6 A 497 TYR PHE PRO LEU PHE VAL THR LYS ASN LYS LEU GLU LYS SEQRES 7 A 497 GLU LYS ASN HIS ILE GLU GLY PHE SER PRO GLU VAL ALA SEQRES 8 A 497 TRP VAL THR LYS TYR GLY ASP SER ASN LEU PRO GLU GLU SEQRES 9 A 497 ILE ALA ILE ARG PRO THR SER GLU THR ILE MET TYR SER SEQRES 10 A 497 VAL PHE PRO LYS TRP ILE ARG SER TYR ARG ASP LEU PRO SEQRES 11 A 497 LEU LYS LEU ASN GLN TRP ASN THR VAL VAL ARG TRP GLU SEQRES 12 A 497 PHE LYS GLN PRO THR PRO PHE ILE ARG THR ARG GLU PHE SEQRES 13 A 497 LEU TRP GLN GLU GLY HIS THR ALA HIS LYS ASN GLU GLU SEQRES 14 A 497 GLU ALA VAL LYS LEU VAL PHE ASP ILE LEU ASP LEU TYR SEQRES 15 A 497 ARG ARG TRP TYR GLU GLU TYR LEU ALA VAL PRO ILE ILE SEQRES 16 A 497 LYS GLY ILE LYS SER GLU GLY GLU LYS PHE GLY GLY ALA SEQRES 17 A 497 ASN PHE THR SER THR ALA GLU ALA PHE ILE SER GLU ASN SEQRES 18 A 497 GLY ARG ALA ILE GLN ALA ALA THR SER HIS TYR LEU GLY SEQRES 19 A 497 THR ASN PHE ALA LYS MET PHE LYS ILE GLU PHE GLU ASP SEQRES 20 A 497 GLU ASN GLU VAL LYS GLN TYR VAL HIS GLN THR SER TRP SEQRES 21 A 497 GLY CYS THR THR ARG SER ILE GLY ILE MET ILE MET THR SEQRES 22 A 497 HIS GLY ASP ASP LYS GLY LEU VAL LEU PRO PRO ASN VAL SEQRES 23 A 497 SER LYS TYR LYS VAL VAL ILE VAL PRO ILE PHE TYR LYS SEQRES 24 A 497 THR THR ASP GLU ASN ALA ILE HIS SER TYR CYS LYS ASP SEQRES 25 A 497 ILE GLU LYS ILE LEU LYS ASN ALA GLN ILE ASN CYS VAL SEQRES 26 A 497 TYR ASP ASP ARG ALA SER TYR SER PRO GLY TYR LYS PHE SEQRES 27 A 497 ASN HIS TRP GLU LEU ARG GLY ILE PRO ILE ARG ILE GLU SEQRES 28 A 497 VAL GLY PRO LYS ASP LEU GLN ASN ASN SER CYS VAL ILE SEQRES 29 A 497 VAL ARG ARG ASP ASN ASN GLU LYS CYS ASN VAL LYS LYS SEQRES 30 A 497 GLU SER VAL LEU LEU GLU THR GLN GLN MET LEU VAL ASP SEQRES 31 A 497 ILE HIS LYS ASN LEU PHE LEU LYS ALA LYS LYS LYS LEU SEQRES 32 A 497 ASP ASP SER ILE VAL GLN VAL THR SER PHE SER GLU VAL SEQRES 33 A 497 MET ASN ALA LEU ASN LYS LYS LYS MET VAL LEU ALA PRO SEQRES 34 A 497 TRP CYS GLU ASP ILE ALA THR GLU GLU GLU ILE LYS LYS SEQRES 35 A 497 GLU THR GLN ARG LEU SER LEU ASN GLN THR ASN SER GLU SEQRES 36 A 497 THR THR LEU SER GLY ALA MET LYS PRO LEU CYS ILE PRO SEQRES 37 A 497 LEU ASP GLN PRO PRO MET PRO PRO ASN MET LYS CYS PHE SEQRES 38 A 497 TRP SER GLY LYS PRO ALA LYS ARG TRP CYS LEU PHE GLY SEQRES 39 A 497 ARG SER TYR HET JE6 A 901 28 HET PRO A 902 8 HETNAM JE6 ~{N}-[4-[(3~{S})-3-CYANO-3-CYCLOPROPYL-2-OXIDANYLIDENE- HETNAM 2 JE6 PYRROLIDIN-1-YL]-6-METHYL-PYRIDIN-2-YL]-2-PHENYL- HETNAM 3 JE6 ETHANAMIDE HETNAM PRO PROLINE FORMUL 2 JE6 C22 H22 N4 O2 FORMUL 3 PRO C5 H9 N O2 FORMUL 4 HOH *72(H2 O) HELIX 1 AA1 ASN A 261 SER A 273 1 13 HELIX 2 AA2 ARG A 288 LEU A 309 1 22 HELIX 3 AA3 LYS A 322 LYS A 327 1 6 HELIX 4 AA4 PHE A 335 VAL A 339 5 5 HELIX 5 AA5 SER A 360 SER A 366 1 7 HELIX 6 AA6 VAL A 367 ILE A 372 1 6 HELIX 7 AA7 SER A 374 LEU A 378 5 5 HELIX 8 AA8 ASN A 416 TYR A 438 1 23 HELIX 9 AA9 THR A 484 LYS A 491 1 8 HELIX 10 AB1 THR A 513 GLY A 524 1 12 HELIX 11 AB2 PRO A 532 SER A 536 5 5 HELIX 12 AB3 ASP A 551 ALA A 569 1 19 HELIX 13 AB4 SER A 582 ARG A 593 1 12 HELIX 14 AB5 GLY A 602 ASN A 608 1 7 HELIX 15 AB6 SER A 628 ASP A 654 1 27 HELIX 16 AB7 SER A 661 SER A 663 5 3 HELIX 17 AB8 GLU A 664 LYS A 671 1 8 HELIX 18 AB9 ASP A 682 LEU A 696 1 15 SHEET 1 AA1 2 ILE A 276 TYR A 278 0 SHEET 2 AA1 2 TYR A 285 LEU A 287 -1 O ILE A 286 N GLU A 277 SHEET 1 AA211 GLU A 312 ASN A 313 0 SHEET 2 AA211 LEU A 380 VAL A 389 1 O ASN A 383 N GLU A 312 SHEET 3 AA211 GLU A 404 HIS A 414 -1 O HIS A 411 N LEU A 382 SHEET 4 AA211 HIS A 505 THR A 512 -1 O TRP A 509 N GLY A 410 SHEET 5 AA211 ARG A 472 GLY A 483 -1 N HIS A 480 O SER A 508 SHEET 6 AA211 PHE A 459 ILE A 467 -1 N SER A 461 O SER A 479 SHEET 7 AA211 ILE A 444 ILE A 447 -1 N GLY A 446 O THR A 462 SHEET 8 AA211 LYS A 712 PRO A 717 -1 O ILE A 716 N ILE A 447 SHEET 9 AA211 ARG A 738 SER A 745 -1 O LEU A 741 N LEU A 714 SHEET 10 AA211 MET A 674 TRP A 679 -1 N TRP A 679 O ARG A 738 SHEET 11 AA211 ILE A 656 GLN A 658 1 N VAL A 657 O MET A 674 SHEET 1 AA3 8 GLU A 312 ASN A 313 0 SHEET 2 AA3 8 LEU A 380 VAL A 389 1 O ASN A 383 N GLU A 312 SHEET 3 AA3 8 GLU A 404 HIS A 414 -1 O HIS A 411 N LEU A 382 SHEET 4 AA3 8 HIS A 505 THR A 512 -1 O TRP A 509 N GLY A 410 SHEET 5 AA3 8 ARG A 472 GLY A 483 -1 N HIS A 480 O SER A 508 SHEET 6 AA3 8 ARG A 738 SER A 745 1 O ARG A 744 N ALA A 473 SHEET 7 AA3 8 MET A 674 TRP A 679 -1 N TRP A 679 O ARG A 738 SHEET 8 AA3 8 ILE A 656 GLN A 658 1 N VAL A 657 O MET A 674 SHEET 1 AA4 3 PHE A 319 THR A 321 0 SHEET 2 AA4 3 SER A 348 ILE A 356 -1 O ALA A 355 N VAL A 320 SHEET 3 AA4 3 TRP A 341 TYR A 345 -1 N VAL A 342 O ILE A 354 SHEET 1 AA5 2 GLU A 493 GLU A 495 0 SHEET 2 AA5 2 LYS A 501 TYR A 503 -1 O GLN A 502 N PHE A 494 SHEET 1 AA6 5 CYS A 573 TYR A 575 0 SHEET 2 AA6 5 VAL A 540 PRO A 544 1 N ILE A 542 O VAL A 574 SHEET 3 AA6 5 ILE A 597 VAL A 601 1 O ILE A 599 N VAL A 543 SHEET 4 AA6 5 SER A 610 ARG A 615 -1 O VAL A 612 N GLU A 600 SHEET 5 AA6 5 LYS A 621 LYS A 625 -1 O CYS A 622 N ILE A 613 CISPEP 1 LEU A 378 PRO A 379 0 -1.59 CRYST1 103.610 103.610 128.040 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009652 0.005572 0.000000 0.00000 SCALE2 0.000000 0.011145 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007810 0.00000