data_7FB8 # _entry.id 7FB8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7FB8 pdb_00007fb8 10.2210/pdb7fb8/pdb WWPDB D_1300023146 ? ? BMRB 36428 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd1.' _pdbx_database_related.db_id 36428 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7FB8 _pdbx_database_status.recvd_initial_deposition_date 2021-07-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yao, H.' 1 ? 'Yao, S.' 2 ? 'Zheng, Y.' 3 ? 'Moyer, A.' 4 ? 'Baker, D.' 5 ? 'Wu, C.' 6 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary 'Nat Commun' ? ? 2041-1723 ? ? 13 ? 1539 1539 'De novo design and directed folding of disulfide-bridged peptide heterodimers.' 2022 ? 10.1038/s41467-022-29210-x 35318337 ? ? ? ? ? ? ? ? ? US ? ? 1 'J Am Chem Soc' JACSAT ? 1520-5126 ? ? 137 ? 15094 15097 'Orthogonal Cysteine-Penicillamine Disulfide Pairing for Directing the Oxidative Folding of Peptides.' 2015 ? 10.1021/jacs.5b10779 26588670 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yao, S.' 1 0000-0002-6463-7612 primary 'Moyer, A.' 2 ? primary 'Zheng, Y.' 3 ? primary 'Shen, Y.' 4 ? primary 'Meng, X.' 5 ? primary 'Yuan, C.' 6 ? primary 'Zhao, Y.' 7 ? primary 'Yao, H.' 8 0000-0003-2383-1942 primary 'Baker, D.' 9 0000-0001-7896-6217 primary 'Wu, C.' 10 0000-0003-2946-7299 1 'Zheng, Y.' 11 ? 1 'Zhai, L.' 12 ? 1 'Zhao, Y.' 13 ? 1 'Wu, C.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ASP-ASP-LYS-ASP-CYS-ASP-GLU-TYR-CYS-LYS-LYS-THR-LYS-GLU-NH2 1721.884 1 ? ? ? ? 2 polymer syn GLU-LE1-THR-GLY-HIS-ILE-GLU-GLY-PRO-THR-LE1-THR-LE1-HIS-CYS-LYS-NH2 1804.142 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes 'DDKDCDEYCKKTKE(NH2)' DDKDCDEYCKKTKEX B ? 2 'polypeptide(L)' no yes 'E(LE1)TGHIEGPT(LE1)T(LE1)HCK(NH2)' EXTGHIEGPTXTXHCKX A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ASP n 1 3 LYS n 1 4 ASP n 1 5 CYS n 1 6 ASP n 1 7 GLU n 1 8 TYR n 1 9 CYS n 1 10 LYS n 1 11 LYS n 1 12 THR n 1 13 LYS n 1 14 GLU n 1 15 NH2 n 2 1 GLU n 2 2 LE1 n 2 3 THR n 2 4 GLY n 2 5 HIS n 2 6 ILE n 2 7 GLU n 2 8 GLY n 2 9 PRO n 2 10 THR n 2 11 LE1 n 2 12 THR n 2 13 LE1 n 2 14 HIS n 2 15 CYS n 2 16 LYS n 2 17 NH2 n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 15 'Escherichia virus M13' ? 1977402 ? 2 1 sample 1 17 'Escherichia virus M13' ? 1977402 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7FB8 7FB8 ? 1 ? 1 2 PDB 7FB8 7FB8 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7FB8 B 1 ? 15 ? 7FB8 1 ? 15 ? 1 15 2 2 7FB8 A 1 ? 17 ? 7FB8 1 ? 17 ? 1 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LE1 'L-peptide linking' n 3-sulfanyl-L-valine 'L-LE1ICILLAMINE; L-Penicillamine' 'C5 H11 N O2 S' 149.211 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-13C HSQC' 1 isotropic 2 1 1 '2D 1H-15N HSQC' 1 isotropic 3 1 1 '2D 1H-1H TOCSY' 1 isotropic 4 1 1 '2D 1H-1H NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.3 mM hd1, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label unlabeled _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details 'very easily dissolved in pure water.' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 850 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 7FB8 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 7FB8 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7FB8 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 2 'structure calculation' 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 3 'chemical shift assignment' NMRFAM-SPARKY ? 'Woonghee Lee, Marco Tonelli, John L. Markley' 4 'peak picking' NMRFAM-SPARKY ? 'Woonghee Lee, Marco Tonelli, John L. Markley' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7FB8 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7FB8 _struct.title 'De Novo-Designed and Disulfide-Bridged Peptide Heterodimer - hd1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7FB8 _struct_keywords.text 'de novo design, disulfide-bridged peptide, heterodimer, penicillamine, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 1 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 14 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id B _struct_conf.beg_auth_seq_id 1 _struct_conf.end_auth_comp_id GLU _struct_conf.end_auth_asym_id B _struct_conf.end_auth_seq_id 14 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 B LE1 11 SG ? ? B CYS 5 A LE1 11 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? A CYS 9 SG ? ? ? 1_555 B LE1 13 SG ? ? B CYS 9 A LE1 13 1_555 ? ? ? ? ? ? ? 2.019 ? ? disulf3 disulf ? ? B LE1 2 SG ? ? ? 1_555 B CYS 15 SG ? ? A LE1 2 A CYS 15 1_555 ? ? ? ? ? ? ? 2.021 ? ? covale1 covale both ? A GLU 14 C ? ? ? 1_555 A NH2 15 N ? ? B GLU 14 B NH2 15 1_555 ? ? ? ? ? ? ? 1.305 ? ? covale2 covale both ? B GLU 1 C ? ? ? 1_555 B LE1 2 N ? ? A GLU 1 A LE1 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? B LE1 2 C ? ? ? 1_555 B THR 3 N ? ? A LE1 2 A THR 3 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale4 covale both ? B THR 10 C ? ? ? 1_555 B LE1 11 N ? ? A THR 10 A LE1 11 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale5 covale both ? B LE1 11 C ? ? ? 1_555 B THR 12 N ? ? A LE1 11 A THR 12 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? B THR 12 C ? ? ? 1_555 B LE1 13 N ? ? A THR 12 A LE1 13 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? B LE1 13 C ? ? ? 1_555 B HIS 14 N ? ? A LE1 13 A HIS 14 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale8 covale both ? B LYS 16 C ? ? ? 1_555 B NH2 17 N ? ? A LYS 16 A NH2 17 1_555 ? ? ? ? ? ? ? 1.305 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LE1 B 2 ? GLU B 7 ? LE1 A 2 GLU A 7 AA1 2 THR B 10 ? CYS B 15 ? THR A 10 CYS A 15 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id B _pdbx_struct_sheet_hbond.range_1_label_seq_id 3 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 3 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id HIS _pdbx_struct_sheet_hbond.range_2_label_asym_id B _pdbx_struct_sheet_hbond.range_2_label_seq_id 14 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id HIS _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 14 # _atom_sites.entry_id 7FB8 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP B . n A 1 2 ASP 2 2 2 ASP ASP B . n A 1 3 LYS 3 3 3 LYS LYS B . n A 1 4 ASP 4 4 4 ASP ASP B . n A 1 5 CYS 5 5 5 CYS CYS B . n A 1 6 ASP 6 6 6 ASP ASP B . n A 1 7 GLU 7 7 7 GLU GLU B . n A 1 8 TYR 8 8 8 TYR TYR B . n A 1 9 CYS 9 9 9 CYS CYS B . n A 1 10 LYS 10 10 10 LYS LYS B . n A 1 11 LYS 11 11 11 LYS LYS B . n A 1 12 THR 12 12 12 THR THR B . n A 1 13 LYS 13 13 13 LYS LYS B . n A 1 14 GLU 14 14 14 GLU GLU B . n A 1 15 NH2 15 15 15 NH2 NH2 B . n B 2 1 GLU 1 1 1 GLU GLU A . n B 2 2 LE1 2 2 2 LE1 LE1 A . n B 2 3 THR 3 3 3 THR THR A . n B 2 4 GLY 4 4 4 GLY GLY A . n B 2 5 HIS 5 5 5 HIS HIS A . n B 2 6 ILE 6 6 6 ILE ILE A . n B 2 7 GLU 7 7 7 GLU GLU A . n B 2 8 GLY 8 8 8 GLY GLY A . n B 2 9 PRO 9 9 9 PRO PRO A . n B 2 10 THR 10 10 10 THR THR A . n B 2 11 LE1 11 11 11 LE1 LE1 A . n B 2 12 THR 12 12 12 THR THR A . n B 2 13 LE1 13 13 13 LE1 LE1 A . n B 2 14 HIS 14 14 14 HIS HIS A . n B 2 15 CYS 15 15 15 CYS CYS A . n B 2 16 LYS 16 16 16 LYS LYS A . n B 2 17 NH2 17 17 17 NH2 NH2 A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 920 ? 1 MORE -7 ? 1 'SSA (A^2)' 2560 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-05-18 2 'Structure model' 1 1 2022-06-22 3 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_database_related 2 3 'Structure model' atom_site 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_database_related.details' 2 3 'Structure model' '_atom_site.auth_atom_id' 3 3 'Structure model' '_atom_site.label_atom_id' # _pdbx_entry_details.entry_id 7FB8 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component hd1 _pdbx_nmr_exptl_sample.concentration 1.3 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASP N N N N 1 ASP CA C N S 2 ASP C C N N 3 ASP O O N N 4 ASP CB C N N 5 ASP CG C N N 6 ASP OD1 O N N 7 ASP OD2 O N N 8 ASP OXT O N N 9 ASP H H N N 10 ASP H2 H N N 11 ASP HA H N N 12 ASP HB2 H N N 13 ASP HB3 H N N 14 ASP HD2 H N N 15 ASP HXT H N N 16 CYS N N N N 17 CYS CA C N R 18 CYS C C N N 19 CYS O O N N 20 CYS CB C N N 21 CYS SG S N N 22 CYS OXT O N N 23 CYS H H N N 24 CYS H2 H N N 25 CYS HA H N N 26 CYS HB2 H N N 27 CYS HB3 H N N 28 CYS HG H N N 29 CYS HXT H N N 30 GLU N N N N 31 GLU CA C N S 32 GLU C C N N 33 GLU O O N N 34 GLU CB C N N 35 GLU CG C N N 36 GLU CD C N N 37 GLU OE1 O N N 38 GLU OE2 O N N 39 GLU OXT O N N 40 GLU H H N N 41 GLU H2 H N N 42 GLU HA H N N 43 GLU HB2 H N N 44 GLU HB3 H N N 45 GLU HG2 H N N 46 GLU HG3 H N N 47 GLU HE2 H N N 48 GLU HXT H N N 49 GLY N N N N 50 GLY CA C N N 51 GLY C C N N 52 GLY O O N N 53 GLY OXT O N N 54 GLY H H N N 55 GLY H2 H N N 56 GLY HA2 H N N 57 GLY HA3 H N N 58 GLY HXT H N N 59 HIS N N N N 60 HIS CA C N S 61 HIS C C N N 62 HIS O O N N 63 HIS CB C N N 64 HIS CG C Y N 65 HIS ND1 N Y N 66 HIS CD2 C Y N 67 HIS CE1 C Y N 68 HIS NE2 N Y N 69 HIS OXT O N N 70 HIS H H N N 71 HIS H2 H N N 72 HIS HA H N N 73 HIS HB2 H N N 74 HIS HB3 H N N 75 HIS HD1 H N N 76 HIS HD2 H N N 77 HIS HE1 H N N 78 HIS HE2 H N N 79 HIS HXT H N N 80 ILE N N N N 81 ILE CA C N S 82 ILE C C N N 83 ILE O O N N 84 ILE CB C N S 85 ILE CG1 C N N 86 ILE CG2 C N N 87 ILE CD1 C N N 88 ILE OXT O N N 89 ILE H H N N 90 ILE H2 H N N 91 ILE HA H N N 92 ILE HB H N N 93 ILE HG12 H N N 94 ILE HG13 H N N 95 ILE HG21 H N N 96 ILE HG22 H N N 97 ILE HG23 H N N 98 ILE HD11 H N N 99 ILE HD12 H N N 100 ILE HD13 H N N 101 ILE HXT H N N 102 LE1 O O N N 103 LE1 C C N N 104 LE1 CA C N R 105 LE1 N N N N 106 LE1 CB C N N 107 LE1 C9 C N N 108 LE1 C8 C N N 109 LE1 SG S N N 110 LE1 OXT O N N 111 LE1 HA H N N 112 LE1 H H N N 113 LE1 H2 H N N 114 LE1 H9 H N N 115 LE1 H9A H N N 116 LE1 H9B H N N 117 LE1 H8 H N N 118 LE1 H8A H N N 119 LE1 H8B H N N 120 LE1 HSG H N N 121 LE1 HXT H N N 122 LYS N N N N 123 LYS CA C N S 124 LYS C C N N 125 LYS O O N N 126 LYS CB C N N 127 LYS CG C N N 128 LYS CD C N N 129 LYS CE C N N 130 LYS NZ N N N 131 LYS OXT O N N 132 LYS H H N N 133 LYS H2 H N N 134 LYS HA H N N 135 LYS HB2 H N N 136 LYS HB3 H N N 137 LYS HG2 H N N 138 LYS HG3 H N N 139 LYS HD2 H N N 140 LYS HD3 H N N 141 LYS HE2 H N N 142 LYS HE3 H N N 143 LYS HZ1 H N N 144 LYS HZ2 H N N 145 LYS HZ3 H N N 146 LYS HXT H N N 147 NH2 N N N N 148 NH2 HN1 H N N 149 NH2 HN2 H N N 150 PRO N N N N 151 PRO CA C N S 152 PRO C C N N 153 PRO O O N N 154 PRO CB C N N 155 PRO CG C N N 156 PRO CD C N N 157 PRO OXT O N N 158 PRO H H N N 159 PRO HA H N N 160 PRO HB2 H N N 161 PRO HB3 H N N 162 PRO HG2 H N N 163 PRO HG3 H N N 164 PRO HD2 H N N 165 PRO HD3 H N N 166 PRO HXT H N N 167 THR N N N N 168 THR CA C N S 169 THR C C N N 170 THR O O N N 171 THR CB C N R 172 THR OG1 O N N 173 THR CG2 C N N 174 THR OXT O N N 175 THR H H N N 176 THR H2 H N N 177 THR HA H N N 178 THR HB H N N 179 THR HG1 H N N 180 THR HG21 H N N 181 THR HG22 H N N 182 THR HG23 H N N 183 THR HXT H N N 184 TYR N N N N 185 TYR CA C N S 186 TYR C C N N 187 TYR O O N N 188 TYR CB C N N 189 TYR CG C Y N 190 TYR CD1 C Y N 191 TYR CD2 C Y N 192 TYR CE1 C Y N 193 TYR CE2 C Y N 194 TYR CZ C Y N 195 TYR OH O N N 196 TYR OXT O N N 197 TYR H H N N 198 TYR H2 H N N 199 TYR HA H N N 200 TYR HB2 H N N 201 TYR HB3 H N N 202 TYR HD1 H N N 203 TYR HD2 H N N 204 TYR HE1 H N N 205 TYR HE2 H N N 206 TYR HH H N N 207 TYR HXT H N N 208 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASP N CA sing N N 1 ASP N H sing N N 2 ASP N H2 sing N N 3 ASP CA C sing N N 4 ASP CA CB sing N N 5 ASP CA HA sing N N 6 ASP C O doub N N 7 ASP C OXT sing N N 8 ASP CB CG sing N N 9 ASP CB HB2 sing N N 10 ASP CB HB3 sing N N 11 ASP CG OD1 doub N N 12 ASP CG OD2 sing N N 13 ASP OD2 HD2 sing N N 14 ASP OXT HXT sing N N 15 CYS N CA sing N N 16 CYS N H sing N N 17 CYS N H2 sing N N 18 CYS CA C sing N N 19 CYS CA CB sing N N 20 CYS CA HA sing N N 21 CYS C O doub N N 22 CYS C OXT sing N N 23 CYS CB SG sing N N 24 CYS CB HB2 sing N N 25 CYS CB HB3 sing N N 26 CYS SG HG sing N N 27 CYS OXT HXT sing N N 28 GLU N CA sing N N 29 GLU N H sing N N 30 GLU N H2 sing N N 31 GLU CA C sing N N 32 GLU CA CB sing N N 33 GLU CA HA sing N N 34 GLU C O doub N N 35 GLU C OXT sing N N 36 GLU CB CG sing N N 37 GLU CB HB2 sing N N 38 GLU CB HB3 sing N N 39 GLU CG CD sing N N 40 GLU CG HG2 sing N N 41 GLU CG HG3 sing N N 42 GLU CD OE1 doub N N 43 GLU CD OE2 sing N N 44 GLU OE2 HE2 sing N N 45 GLU OXT HXT sing N N 46 GLY N CA sing N N 47 GLY N H sing N N 48 GLY N H2 sing N N 49 GLY CA C sing N N 50 GLY CA HA2 sing N N 51 GLY CA HA3 sing N N 52 GLY C O doub N N 53 GLY C OXT sing N N 54 GLY OXT HXT sing N N 55 HIS N CA sing N N 56 HIS N H sing N N 57 HIS N H2 sing N N 58 HIS CA C sing N N 59 HIS CA CB sing N N 60 HIS CA HA sing N N 61 HIS C O doub N N 62 HIS C OXT sing N N 63 HIS CB CG sing N N 64 HIS CB HB2 sing N N 65 HIS CB HB3 sing N N 66 HIS CG ND1 sing Y N 67 HIS CG CD2 doub Y N 68 HIS ND1 CE1 doub Y N 69 HIS ND1 HD1 sing N N 70 HIS CD2 NE2 sing Y N 71 HIS CD2 HD2 sing N N 72 HIS CE1 NE2 sing Y N 73 HIS CE1 HE1 sing N N 74 HIS NE2 HE2 sing N N 75 HIS OXT HXT sing N N 76 ILE N CA sing N N 77 ILE N H sing N N 78 ILE N H2 sing N N 79 ILE CA C sing N N 80 ILE CA CB sing N N 81 ILE CA HA sing N N 82 ILE C O doub N N 83 ILE C OXT sing N N 84 ILE CB CG1 sing N N 85 ILE CB CG2 sing N N 86 ILE CB HB sing N N 87 ILE CG1 CD1 sing N N 88 ILE CG1 HG12 sing N N 89 ILE CG1 HG13 sing N N 90 ILE CG2 HG21 sing N N 91 ILE CG2 HG22 sing N N 92 ILE CG2 HG23 sing N N 93 ILE CD1 HD11 sing N N 94 ILE CD1 HD12 sing N N 95 ILE CD1 HD13 sing N N 96 ILE OXT HXT sing N N 97 LE1 O C doub N N 98 LE1 C OXT sing N N 99 LE1 CA C sing N N 100 LE1 CA CB sing N N 101 LE1 CA HA sing N N 102 LE1 N CA sing N N 103 LE1 N H sing N N 104 LE1 N H2 sing N N 105 LE1 CB C9 sing N N 106 LE1 CB C8 sing N N 107 LE1 C9 H9 sing N N 108 LE1 C9 H9A sing N N 109 LE1 C9 H9B sing N N 110 LE1 C8 H8 sing N N 111 LE1 C8 H8A sing N N 112 LE1 C8 H8B sing N N 113 LE1 SG CB sing N N 114 LE1 SG HSG sing N N 115 LE1 OXT HXT sing N N 116 LYS N CA sing N N 117 LYS N H sing N N 118 LYS N H2 sing N N 119 LYS CA C sing N N 120 LYS CA CB sing N N 121 LYS CA HA sing N N 122 LYS C O doub N N 123 LYS C OXT sing N N 124 LYS CB CG sing N N 125 LYS CB HB2 sing N N 126 LYS CB HB3 sing N N 127 LYS CG CD sing N N 128 LYS CG HG2 sing N N 129 LYS CG HG3 sing N N 130 LYS CD CE sing N N 131 LYS CD HD2 sing N N 132 LYS CD HD3 sing N N 133 LYS CE NZ sing N N 134 LYS CE HE2 sing N N 135 LYS CE HE3 sing N N 136 LYS NZ HZ1 sing N N 137 LYS NZ HZ2 sing N N 138 LYS NZ HZ3 sing N N 139 LYS OXT HXT sing N N 140 NH2 N HN1 sing N N 141 NH2 N HN2 sing N N 142 PRO N CA sing N N 143 PRO N CD sing N N 144 PRO N H sing N N 145 PRO CA C sing N N 146 PRO CA CB sing N N 147 PRO CA HA sing N N 148 PRO C O doub N N 149 PRO C OXT sing N N 150 PRO CB CG sing N N 151 PRO CB HB2 sing N N 152 PRO CB HB3 sing N N 153 PRO CG CD sing N N 154 PRO CG HG2 sing N N 155 PRO CG HG3 sing N N 156 PRO CD HD2 sing N N 157 PRO CD HD3 sing N N 158 PRO OXT HXT sing N N 159 THR N CA sing N N 160 THR N H sing N N 161 THR N H2 sing N N 162 THR CA C sing N N 163 THR CA CB sing N N 164 THR CA HA sing N N 165 THR C O doub N N 166 THR C OXT sing N N 167 THR CB OG1 sing N N 168 THR CB CG2 sing N N 169 THR CB HB sing N N 170 THR OG1 HG1 sing N N 171 THR CG2 HG21 sing N N 172 THR CG2 HG22 sing N N 173 THR CG2 HG23 sing N N 174 THR OXT HXT sing N N 175 TYR N CA sing N N 176 TYR N H sing N N 177 TYR N H2 sing N N 178 TYR CA C sing N N 179 TYR CA CB sing N N 180 TYR CA HA sing N N 181 TYR C O doub N N 182 TYR C OXT sing N N 183 TYR CB CG sing N N 184 TYR CB HB2 sing N N 185 TYR CB HB3 sing N N 186 TYR CG CD1 doub Y N 187 TYR CG CD2 sing Y N 188 TYR CD1 CE1 sing Y N 189 TYR CD1 HD1 sing N N 190 TYR CD2 CE2 doub Y N 191 TYR CD2 HD2 sing N N 192 TYR CE1 CZ doub Y N 193 TYR CE1 HE1 sing N N 194 TYR CE2 CZ sing Y N 195 TYR CE2 HE2 sing N N 196 TYR CZ OH sing N N 197 TYR OH HH sing N N 198 TYR OXT HXT sing N N 199 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation of China (NSFC)' China 31870735 1 'National Natural Science Foundation of China (NSFC)' China 21822404 2 'National Natural Science Foundation of China (NSFC)' China 91853112 3 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id LE1 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id LE1 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details ? #