HEADER DNA BINDING PROTEIN 22-JUL-21 7FEW TITLE PSEUDOMONAS AERUGINOSA VIRULENCE FACTOR REGULATOR WITH CAMP LIGAND AND TITLE 2 AURANOFIN GOLD ANALOGUES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-ACTIVATED GLOBAL TRANSCRIPTIONAL REGULATOR VFR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAMP-ACTIVATED GLOBAL TRANSCRIPTIONAL REGULATOR VFR; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: VFR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: T1R; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: 209E6; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 12 ORGANISM_TAXID: 208964; SOURCE 13 STRAIN: PAO1; SOURCE 14 GENE: VFR; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: T1R; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: 209E6 KEYWDS CYCLIC AMP RECEPTOR PROTEIN, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.L.A.CHEW,D.LUO REVDAT 3 07-FEB-24 7FEW 1 JRNL REVDAT 2 29-NOV-23 7FEW 1 REMARK REVDAT 1 27-JUL-22 7FEW 0 JRNL AUTH Y.ZHANG,B.L.A.CHEW,J.WANG,M.YUAN,J.K.H.YAM,D.LUO,L.YANG JRNL TITL STRUCTURAL BASIS FOR THE INHIBITORY MECHANISM OF AURANOFIN JRNL TITL 2 AND GOLD(I) ANALOGUES AGAINST PSEUDOMONAS AERUGINOSA GLOBAL JRNL TITL 3 VIRULENCE FACTOR REGULATOR VFR. JRNL REF COMPUT STRUCT BIOTECHNOL J V. 21 2137 2023 JRNL REFN ESSN 2001-0370 JRNL PMID 37007650 JRNL DOI 10.1016/J.CSBJ.2023.03.013 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 81214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 4099 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.2900 - 5.3700 0.98 2654 144 0.1973 0.1825 REMARK 3 2 5.3700 - 4.2600 0.99 2696 143 0.1623 0.1759 REMARK 3 3 4.2600 - 3.7300 0.99 2735 133 0.1457 0.1605 REMARK 3 4 3.7300 - 3.3900 0.99 2732 100 0.1577 0.1810 REMARK 3 5 3.3900 - 3.1400 1.00 2688 156 0.1643 0.1981 REMARK 3 6 3.1400 - 2.9600 1.00 2688 173 0.1732 0.1822 REMARK 3 7 2.9600 - 2.8100 1.00 2728 137 0.1741 0.2060 REMARK 3 8 2.8100 - 2.6900 1.00 2734 122 0.1770 0.1833 REMARK 3 9 2.6900 - 2.5800 1.00 2702 145 0.1800 0.2231 REMARK 3 10 2.5800 - 2.5000 1.00 2704 168 0.1808 0.2023 REMARK 3 11 2.5000 - 2.4200 1.00 2760 129 0.1738 0.2229 REMARK 3 12 2.4200 - 2.3500 1.00 2706 142 0.1768 0.2213 REMARK 3 13 2.3500 - 2.2900 1.00 2709 138 0.1708 0.2203 REMARK 3 14 2.2900 - 2.2300 1.00 2723 155 0.1718 0.2161 REMARK 3 15 2.2300 - 2.1800 1.00 2682 157 0.1719 0.2199 REMARK 3 16 2.1800 - 2.1300 1.00 2710 151 0.1659 0.2003 REMARK 3 17 2.1300 - 2.0900 1.00 2696 149 0.1789 0.2405 REMARK 3 18 2.0900 - 2.0500 1.00 2683 140 0.1754 0.2001 REMARK 3 19 2.0500 - 2.0100 1.00 2760 183 0.1731 0.1726 REMARK 3 20 2.0100 - 1.9800 1.00 2723 116 0.1823 0.2251 REMARK 3 21 1.9800 - 1.9500 1.00 2680 171 0.1772 0.2307 REMARK 3 22 1.9500 - 1.9200 1.00 2775 126 0.2000 0.2361 REMARK 3 23 1.9200 - 1.8900 1.00 2671 134 0.2125 0.2551 REMARK 3 24 1.8900 - 1.8600 0.98 2734 120 0.2308 0.2808 REMARK 3 25 1.8600 - 1.8400 0.96 2562 132 0.2332 0.2341 REMARK 3 26 1.8400 - 1.8100 0.92 2532 156 0.2401 0.2401 REMARK 3 27 1.8100 - 1.7900 0.90 2426 132 0.2651 0.2806 REMARK 3 28 1.7900 - 1.7700 0.85 2300 130 0.2824 0.3171 REMARK 3 29 1.7700 - 1.7500 0.80 2222 117 0.2992 0.3457 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.187 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.693 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3302 REMARK 3 ANGLE : 0.849 4456 REMARK 3 CHIRALITY : 0.051 504 REMARK 3 PLANARITY : 0.004 558 REMARK 3 DIHEDRAL : 35.356 472 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 407.6404 15.5782 129.1336 REMARK 3 T TENSOR REMARK 3 T11: 0.2520 T22: 0.2487 REMARK 3 T33: 0.2563 T12: 0.0143 REMARK 3 T13: 0.0875 T23: -0.0711 REMARK 3 L TENSOR REMARK 3 L11: 0.0138 L22: -0.0113 REMARK 3 L33: 0.1166 L12: 0.0830 REMARK 3 L13: -0.2004 L23: -0.1223 REMARK 3 S TENSOR REMARK 3 S11: -0.1072 S12: 0.1182 S13: -0.2747 REMARK 3 S21: -0.2782 S22: 0.0441 S23: -0.3824 REMARK 3 S31: 0.0944 S32: 0.0428 S33: 0.1681 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 401.5521 11.7205 145.9884 REMARK 3 T TENSOR REMARK 3 T11: 0.1612 T22: 0.1338 REMARK 3 T33: 0.1428 T12: 0.0171 REMARK 3 T13: -0.0350 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: -0.0159 L22: 0.1083 REMARK 3 L33: 0.1694 L12: 0.0595 REMARK 3 L13: 0.0461 L23: -0.1952 REMARK 3 S TENSOR REMARK 3 S11: 0.2453 S12: 0.0993 S13: -0.0466 REMARK 3 S21: 0.1648 S22: -0.0242 S23: -0.0143 REMARK 3 S31: 0.1642 S32: 0.1394 S33: 0.0018 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 395.1806 18.6884 144.6509 REMARK 3 T TENSOR REMARK 3 T11: 0.1562 T22: 0.1479 REMARK 3 T33: 0.1334 T12: 0.0106 REMARK 3 T13: 0.0024 T23: 0.0137 REMARK 3 L TENSOR REMARK 3 L11: 0.5647 L22: 0.7437 REMARK 3 L33: 0.1541 L12: 0.1842 REMARK 3 L13: 0.1892 L23: -0.0424 REMARK 3 S TENSOR REMARK 3 S11: 0.0482 S12: -0.0434 S13: -0.0213 REMARK 3 S21: 0.0670 S22: -0.0289 S23: 0.1245 REMARK 3 S31: 0.0407 S32: -0.0238 S33: -0.0017 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 404.3668 19.8719 144.7725 REMARK 3 T TENSOR REMARK 3 T11: 0.1487 T22: 0.1110 REMARK 3 T33: 0.1236 T12: 0.0144 REMARK 3 T13: -0.0066 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.3682 L22: 0.6416 REMARK 3 L33: 0.3551 L12: -0.1563 REMARK 3 L13: -0.3471 L23: -0.3328 REMARK 3 S TENSOR REMARK 3 S11: 0.0971 S12: -0.0100 S13: 0.0331 REMARK 3 S21: -0.0092 S22: -0.0487 S23: -0.1175 REMARK 3 S31: 0.0025 S32: 0.0315 S33: 0.0049 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 412.9364 18.7344 134.8855 REMARK 3 T TENSOR REMARK 3 T11: 0.1687 T22: 0.2429 REMARK 3 T33: 0.1911 T12: 0.0334 REMARK 3 T13: -0.0015 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.1736 L22: 0.2630 REMARK 3 L33: 0.1857 L12: -0.2639 REMARK 3 L13: -0.0058 L23: -0.0422 REMARK 3 S TENSOR REMARK 3 S11: -0.1025 S12: 0.0958 S13: 0.0833 REMARK 3 S21: -0.0298 S22: 0.1162 S23: -0.0118 REMARK 3 S31: 0.1837 S32: 0.1752 S33: -0.0004 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): 398.8459 31.7353 140.9143 REMARK 3 T TENSOR REMARK 3 T11: 0.1738 T22: 0.1249 REMARK 3 T33: 0.1668 T12: 0.0178 REMARK 3 T13: 0.0110 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.1711 L22: 0.1654 REMARK 3 L33: 0.1915 L12: 0.0002 REMARK 3 L13: 0.2147 L23: 0.2051 REMARK 3 S TENSOR REMARK 3 S11: -0.0518 S12: 0.0059 S13: -0.0014 REMARK 3 S21: -0.1056 S22: -0.0066 S23: 0.0488 REMARK 3 S31: 0.1012 S32: -0.0402 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 380.6880 29.8384 143.5191 REMARK 3 T TENSOR REMARK 3 T11: 0.2028 T22: 0.2129 REMARK 3 T33: 0.1679 T12: 0.0017 REMARK 3 T13: -0.0329 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.0452 L22: 0.1766 REMARK 3 L33: 0.0682 L12: -0.0476 REMARK 3 L13: 0.0067 L23: -0.1124 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: -0.0330 S13: 0.0743 REMARK 3 S21: -0.1569 S22: -0.0134 S23: 0.1431 REMARK 3 S31: 0.1181 S32: -0.0187 S33: 0.0002 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 380.0819 22.1772 131.6840 REMARK 3 T TENSOR REMARK 3 T11: 0.4126 T22: 0.2860 REMARK 3 T33: 0.1615 T12: -0.0568 REMARK 3 T13: -0.0199 T23: -0.0295 REMARK 3 L TENSOR REMARK 3 L11: 0.0897 L22: 0.1340 REMARK 3 L33: 0.0822 L12: 0.1189 REMARK 3 L13: -0.1057 L23: -0.1393 REMARK 3 S TENSOR REMARK 3 S11: -0.4011 S12: 0.2807 S13: -0.1755 REMARK 3 S21: -0.2959 S22: 0.1476 S23: -0.2348 REMARK 3 S31: 1.2243 S32: -0.2272 S33: -0.0333 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 375.1397 22.0914 143.2444 REMARK 3 T TENSOR REMARK 3 T11: 0.2254 T22: 0.2309 REMARK 3 T33: 0.1748 T12: -0.0390 REMARK 3 T13: 0.0276 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.4628 L22: 0.4987 REMARK 3 L33: 0.5773 L12: 0.1540 REMARK 3 L13: -0.1004 L23: -0.0785 REMARK 3 S TENSOR REMARK 3 S11: -0.1476 S12: -0.0707 S13: -0.0797 REMARK 3 S21: -0.2160 S22: 0.0089 S23: -0.0720 REMARK 3 S31: 0.2935 S32: -0.1946 S33: -0.0113 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 409.7680 49.8685 142.9901 REMARK 3 T TENSOR REMARK 3 T11: 0.1884 T22: 0.1562 REMARK 3 T33: 0.2061 T12: -0.0474 REMARK 3 T13: 0.0337 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.1646 L22: 0.4437 REMARK 3 L33: 0.3380 L12: 0.1697 REMARK 3 L13: 0.1172 L23: -0.0660 REMARK 3 S TENSOR REMARK 3 S11: -0.0905 S12: 0.0344 S13: -0.0503 REMARK 3 S21: -0.2436 S22: 0.0365 S23: -0.1295 REMARK 3 S31: -0.1929 S32: 0.0953 S33: -0.0165 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 40 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 404.6102 40.4546 144.6890 REMARK 3 T TENSOR REMARK 3 T11: 0.1300 T22: 0.1033 REMARK 3 T33: 0.1431 T12: 0.0006 REMARK 3 T13: 0.0211 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 0.8018 L22: 1.6806 REMARK 3 L33: 0.8599 L12: 0.5520 REMARK 3 L13: -0.2386 L23: 0.0010 REMARK 3 S TENSOR REMARK 3 S11: -0.0692 S12: -0.0158 S13: -0.0578 REMARK 3 S21: -0.1526 S22: 0.0450 S23: -0.1214 REMARK 3 S31: -0.0070 S32: 0.0221 S33: -0.0317 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 140 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 389.5616 40.6956 169.8931 REMARK 3 T TENSOR REMARK 3 T11: 0.1204 T22: 0.2389 REMARK 3 T33: 0.1654 T12: -0.0250 REMARK 3 T13: -0.0037 T23: -0.0247 REMARK 3 L TENSOR REMARK 3 L11: 0.9502 L22: 0.8660 REMARK 3 L33: 0.9909 L12: 0.2922 REMARK 3 L13: 0.3182 L23: -0.3772 REMARK 3 S TENSOR REMARK 3 S11: 0.1346 S12: -0.2397 S13: -0.0074 REMARK 3 S21: -0.0025 S22: -0.1335 S23: 0.0090 REMARK 3 S31: -0.0004 S32: -0.1120 S33: -0.0177 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7FEW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1300023412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81214 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 33.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.02433 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2OZ6 REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS REMARK 200 COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.6 M AMMONIUM SULPHATE, 0.1 M BICINE REMARK 280 PH 9.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 67.63500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.77650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 67.63500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.77650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -141.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 B 306 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 THR A 5 REMARK 465 HIS A 6 REMARK 465 THR A 7 REMARK 465 PRO A 8 REMARK 465 LYS A 9 REMARK 465 THR B 2 REMARK 465 GLY B 3 REMARK 465 GLY B 4 REMARK 465 THR B 5 REMARK 465 HIS B 6 REMARK 465 THR B 7 REMARK 465 PRO B 8 REMARK 465 LYS B 9 REMARK 465 LEU B 10 REMARK 465 GLY B 82 REMARK 465 ARG B 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 21 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 37 CD NE CZ NH1 NH2 REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 GLN A 113 CG CD OE1 NE2 REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 GLU A 186 CG CD OE1 OE2 REMARK 470 LYS A 193 CG CD CE NZ REMARK 470 LYS B 11 CG CD CE NZ REMARK 470 ARG B 37 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 81 CG CD OE1 OE2 REMARK 470 GLN B 113 CG CD OE1 NE2 REMARK 470 LYS B 171 CG CD CE NZ REMARK 470 GLU B 197 CG CD OE1 OE2 REMARK 470 LYS B 204 CG CD CE NZ REMARK 470 LYS B 206 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 405 O HOH B 411 1.61 REMARK 500 O HOH B 533 O HOH B 543 1.71 REMARK 500 O HOH A 494 O HOH A 558 1.78 REMARK 500 O HOH B 558 O HOH B 567 1.92 REMARK 500 O HOH A 468 O HOH A 505 1.92 REMARK 500 O HOH A 525 O HOH B 430 1.97 REMARK 500 O HOH B 527 O HOH B 573 1.97 REMARK 500 O HOH B 565 O HOH B 568 2.02 REMARK 500 O HOH A 499 O HOH A 524 2.03 REMARK 500 O HOH A 511 O HOH A 540 2.04 REMARK 500 O HOH A 537 O HOH B 478 2.04 REMARK 500 O HOH A 403 O HOH A 538 2.05 REMARK 500 O HOH B 486 O HOH B 557 2.09 REMARK 500 O HOH A 561 O HOH B 515 2.10 REMARK 500 O HOH B 496 O HOH B 540 2.13 REMARK 500 OE1 GLU B 79 O HOH B 401 2.13 REMARK 500 O HOH B 513 O HOH B 548 2.13 REMARK 500 OG SER A 115 O GLN B 112 2.17 REMARK 500 NE ARG B 92 O HOH B 402 2.17 REMARK 500 O HOH A 431 O HOH A 536 2.17 REMARK 500 O HOH B 502 O HOH B 548 2.18 REMARK 500 O ASP A 56 O HOH A 401 2.18 REMARK 500 O HOH A 543 O HOH A 554 2.19 REMARK 500 O HOH B 465 O HOH B 556 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O1 SO4 B 306 O3 SO4 B 306 11510 0.04 REMARK 500 O2 SO4 B 306 O4 SO4 B 306 11510 0.04 REMARK 500 S SO4 B 306 O1 SO4 B 306 11510 1.46 REMARK 500 S SO4 B 306 O3 SO4 B 306 11510 1.46 REMARK 500 S SO4 B 306 O2 SO4 B 306 11510 1.46 REMARK 500 S SO4 B 306 O4 SO4 B 306 11510 1.46 REMARK 500 O1 SO4 B 306 O1 SO4 B 306 11510 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 28 -6.48 82.55 REMARK 500 ASP A 55 -169.58 -77.92 REMARK 500 LYS B 28 -6.02 83.18 REMARK 500 ASP B 114 77.36 -114.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 565 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 566 DISTANCE = 6.32 ANGSTROMS DBREF 7FEW A 5 214 UNP P55222 VFR_PSEAE 5 214 DBREF 7FEW B 5 214 UNP P55222 VFR_PSEAE 5 214 SEQADV 7FEW THR A 2 UNP P55222 EXPRESSION TAG SEQADV 7FEW GLY A 3 UNP P55222 EXPRESSION TAG SEQADV 7FEW GLY A 4 UNP P55222 EXPRESSION TAG SEQADV 7FEW THR B 2 UNP P55222 EXPRESSION TAG SEQADV 7FEW GLY B 3 UNP P55222 EXPRESSION TAG SEQADV 7FEW GLY B 4 UNP P55222 EXPRESSION TAG SEQADV 7FEW ASN B 175 UNP P55222 GLN 175 CONFLICT SEQRES 1 A 213 THR GLY GLY THR HIS THR PRO LYS LEU LYS HIS LEU ASP SEQRES 2 A 213 LYS LEU LEU ALA HIS CYS HIS ARG ARG ARG TYR THR ALA SEQRES 3 A 213 LYS SER THR ILE ILE TYR ALA GLY ASP ARG CYS GLU THR SEQRES 4 A 213 LEU PHE PHE ILE ILE LYS GLY SER VAL THR ILE LEU ILE SEQRES 5 A 213 GLU ASP ASP ASP GLY ARG GLU MET ILE ILE GLY TYR LEU SEQRES 6 A 213 ASN SER GLY ASP PHE PHE GLY GLU LEU GLY LEU PHE GLU SEQRES 7 A 213 LYS GLU GLY SER GLU GLN GLU ARG SER ALA TRP VAL ARG SEQRES 8 A 213 ALA LYS VAL GLU CYS GLU VAL ALA GLU ILE SER TYR ALA SEQRES 9 A 213 LYS PHE ARG GLU LEU SER GLN GLN ASP SER GLU ILE LEU SEQRES 10 A 213 TYR THR LEU GLY SER GLN MET ALA ASP ARG LEU ARG LYS SEQRES 11 A 213 THR THR ARG LYS VAL GLY ASP LEU ALA PHE LEU ASP VAL SEQRES 12 A 213 THR GLY ARG VAL ALA ARG THR LEU LEU ASP LEU CYS GLN SEQRES 13 A 213 GLN PRO ASP ALA MET THR HIS PRO ASP GLY MET GLN ILE SEQRES 14 A 213 LYS ILE THR ARG GLN GLU ILE GLY ARG ILE VAL GLY CYS SEQRES 15 A 213 SER ARG GLU MET VAL GLY ARG VAL LEU LYS SER LEU GLU SEQRES 16 A 213 GLU GLN GLY LEU VAL HIS VAL LYS GLY LYS THR MET VAL SEQRES 17 A 213 VAL PHE GLY THR ARG SEQRES 1 B 213 THR GLY GLY THR HIS THR PRO LYS LEU LYS HIS LEU ASP SEQRES 2 B 213 LYS LEU LEU ALA HIS CYS HIS ARG ARG ARG TYR THR ALA SEQRES 3 B 213 LYS SER THR ILE ILE TYR ALA GLY ASP ARG CYS GLU THR SEQRES 4 B 213 LEU PHE PHE ILE ILE LYS GLY SER VAL THR ILE LEU ILE SEQRES 5 B 213 GLU ASP ASP ASP GLY ARG GLU MET ILE ILE GLY TYR LEU SEQRES 6 B 213 ASN SER GLY ASP PHE PHE GLY GLU LEU GLY LEU PHE GLU SEQRES 7 B 213 LYS GLU GLY SER GLU GLN GLU ARG SER ALA TRP VAL ARG SEQRES 8 B 213 ALA LYS VAL GLU CYS GLU VAL ALA GLU ILE SER TYR ALA SEQRES 9 B 213 LYS PHE ARG GLU LEU SER GLN GLN ASP SER GLU ILE LEU SEQRES 10 B 213 TYR THR LEU GLY SER GLN MET ALA ASP ARG LEU ARG LYS SEQRES 11 B 213 THR THR ARG LYS VAL GLY ASP LEU ALA PHE LEU ASP VAL SEQRES 12 B 213 THR GLY ARG VAL ALA ARG THR LEU LEU ASP LEU CYS GLN SEQRES 13 B 213 GLN PRO ASP ALA MET THR HIS PRO ASP GLY MET GLN ILE SEQRES 14 B 213 LYS ILE THR ARG ASN GLU ILE GLY ARG ILE VAL GLY CYS SEQRES 15 B 213 SER ARG GLU MET VAL GLY ARG VAL LEU LYS SER LEU GLU SEQRES 16 B 213 GLU GLN GLY LEU VAL HIS VAL LYS GLY LYS THR MET VAL SEQRES 17 B 213 VAL PHE GLY THR ARG HET CMP A 301 22 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET CMP B 301 22 HET SO4 B 302 5 HET SO4 B 303 5 HET SO4 B 304 5 HET SO4 B 305 5 HET SO4 B 306 5 HETNAM CMP ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE HETNAM SO4 SULFATE ION HETSYN CMP CYCLIC AMP; CAMP FORMUL 3 CMP 2(C10 H12 N5 O6 P) FORMUL 4 SO4 9(O4 S 2-) FORMUL 14 HOH *340(H2 O) HELIX 1 AA1 LEU A 10 HIS A 12 5 3 HELIX 2 AA2 LEU A 13 ALA A 18 1 6 HELIX 3 AA3 GLU A 74 PHE A 78 5 5 HELIX 4 AA4 TYR A 104 ASP A 114 1 11 HELIX 5 AA5 SER A 115 LEU A 142 1 28 HELIX 6 AA6 ASP A 143 CYS A 156 1 14 HELIX 7 AA7 THR A 173 GLY A 182 1 10 HELIX 8 AA8 SER A 184 GLN A 198 1 15 HELIX 9 AA9 HIS B 12 ALA B 18 1 7 HELIX 10 AB1 TYR B 104 SER B 111 1 8 HELIX 11 AB2 ASP B 114 ALA B 140 1 27 HELIX 12 AB3 ASP B 143 GLN B 157 1 15 HELIX 13 AB4 THR B 173 GLY B 182 1 10 HELIX 14 AB5 SER B 184 GLN B 198 1 15 SHEET 1 AA1 4 HIS A 21 TYR A 25 0 SHEET 2 AA1 4 CYS A 97 SER A 103 -1 O VAL A 99 N ARG A 23 SHEET 3 AA1 4 THR A 40 LYS A 46 -1 N LEU A 41 O ILE A 102 SHEET 4 AA1 4 PHE A 71 PHE A 72 -1 O PHE A 72 N PHE A 42 SHEET 1 AA2 4 THR A 30 ILE A 32 0 SHEET 2 AA2 4 TRP A 90 ALA A 93 -1 O VAL A 91 N ILE A 31 SHEET 3 AA2 4 SER A 48 GLU A 54 -1 N THR A 50 O ARG A 92 SHEET 4 AA2 4 GLU A 60 ASN A 67 -1 O GLY A 64 N ILE A 51 SHEET 1 AA3 4 MET A 162 HIS A 164 0 SHEET 2 AA3 4 GLY A 167 LYS A 171 -1 O GLN A 169 N MET A 162 SHEET 3 AA3 4 THR A 207 PHE A 211 -1 O VAL A 210 N MET A 168 SHEET 4 AA3 4 VAL A 201 VAL A 203 -1 N HIS A 202 O VAL A 209 SHEET 1 AA4 4 HIS B 21 TYR B 25 0 SHEET 2 AA4 4 CYS B 97 SER B 103 -1 O CYS B 97 N TYR B 25 SHEET 3 AA4 4 THR B 40 LYS B 46 -1 N LEU B 41 O ILE B 102 SHEET 4 AA4 4 PHE B 71 PHE B 72 -1 O PHE B 72 N PHE B 42 SHEET 1 AA5 4 THR B 30 ILE B 32 0 SHEET 2 AA5 4 TRP B 90 ALA B 93 -1 O VAL B 91 N ILE B 31 SHEET 3 AA5 4 SER B 48 GLU B 54 -1 N THR B 50 O ARG B 92 SHEET 4 AA5 4 GLU B 60 ASN B 67 -1 O ILE B 63 N ILE B 51 SHEET 1 AA6 4 MET B 162 HIS B 164 0 SHEET 2 AA6 4 GLY B 167 LYS B 171 -1 O GLN B 169 N MET B 162 SHEET 3 AA6 4 THR B 207 PHE B 211 -1 O VAL B 210 N MET B 168 SHEET 4 AA6 4 VAL B 201 LYS B 204 -1 N LYS B 204 O THR B 207 CRYST1 135.270 49.553 64.384 90.00 100.12 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007393 0.000000 0.001319 0.00000 SCALE2 0.000000 0.020180 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015777 0.00000