HEADER TRANSFERASE 08-FEB-23 7FTT TITLE CRYSTAL STRUCTURE OF HUMAN CYCLIC GMP-AMP SYNTHASE IN COMPLEX WITH 5- TITLE 2 BROMO-N-[[2-FLUORO-5-(1-METHYLPYRAZOL-4-YL)PHENYL]METHYL]-2- TITLE 3 HYDROXYBENZAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 161-522; COMPND 5 SYNONYM: CGAMP SYNTHASE,CGAS,H-CGAS,2'3'-CGAMP SYNTHASE,MAB-21 COMPND 6 DOMAIN-CONTAINING PROTEIN 1; COMPND 7 EC: 2.7.7.86; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CGAS, C6ORF150, MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A_CGAS(161-522_WT) KEYWDS IMMUNE RESPONSE, TRANSFERASE, NTASE, DNA SENSOR EXPDTA X-RAY DIFFRACTION AUTHOR L.LEIBROCK,J.BENZ,K.GROEBKE-ZBINDEN,M.G.RUDOLPH REVDAT 1 21-FEB-24 7FTT 0 JRNL AUTH K.GROEBKE-ZBINDEN,A.VANDEMEULEBROUCKE,M.HILBERT,M.G.RUDOLPH JRNL TITL CRYSTAL STRUCTURE OF A HUMAN CYCLIC GMP-AMP SYNTHASE COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 63.4 REMARK 3 NUMBER OF REFLECTIONS : 26174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.1666 - 4.6485 0.99 4522 201 0.1697 0.2423 REMARK 3 2 4.6485 - 3.6899 1.00 4416 223 0.1603 0.2414 REMARK 3 3 3.6899 - 3.2235 1.00 4356 219 0.2199 0.2912 REMARK 3 4 3.2235 - 2.9288 1.00 4360 213 0.2859 0.3656 REMARK 3 5 2.9288 - 2.7189 0.87 3737 217 0.3142 0.3795 REMARK 3 6 2.7189 - 2.5586 0.48 2074 108 0.3332 0.4308 REMARK 3 7 2.5586 - 2.4305 0.23 1011 42 0.3595 0.4767 REMARK 3 8 2.4305 - 2.3247 0.09 384 6 0.3886 0.4359 REMARK 3 9 2.3247 - 2.2352 0.02 83 2 0.3636 0.7128 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 39.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 67.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.0750 -39.6439 25.5070 REMARK 3 T TENSOR REMARK 3 T11: 0.5747 T22: 0.2434 REMARK 3 T33: 0.4937 T12: 0.1254 REMARK 3 T13: 0.1020 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 4.9059 L22: 5.5392 REMARK 3 L33: 1.3744 L12: 4.8587 REMARK 3 L13: -0.5323 L23: -0.1732 REMARK 3 S TENSOR REMARK 3 S11: -0.3369 S12: 0.2580 S13: -1.1561 REMARK 3 S21: 0.0820 S22: 0.2120 S23: -0.1289 REMARK 3 S31: 0.4134 S32: -0.2616 S33: 0.0970 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1284 -22.1381 20.1312 REMARK 3 T TENSOR REMARK 3 T11: 0.2589 T22: 0.4787 REMARK 3 T33: 0.5943 T12: 0.1114 REMARK 3 T13: -0.0336 T23: -0.1850 REMARK 3 L TENSOR REMARK 3 L11: 1.7771 L22: 3.0592 REMARK 3 L33: 2.1846 L12: 2.0925 REMARK 3 L13: -0.3238 L23: -1.4178 REMARK 3 S TENSOR REMARK 3 S11: 0.1009 S12: 0.2351 S13: -0.1513 REMARK 3 S21: -0.0514 S22: 0.0118 S23: 0.5726 REMARK 3 S31: 0.0483 S32: -0.2686 S33: -0.0936 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 326 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1728 -28.6088 30.7449 REMARK 3 T TENSOR REMARK 3 T11: 0.3808 T22: 0.4600 REMARK 3 T33: 0.4760 T12: 0.0499 REMARK 3 T13: 0.1258 T23: -0.0853 REMARK 3 L TENSOR REMARK 3 L11: 1.4470 L22: 1.8469 REMARK 3 L33: 3.0283 L12: -1.1797 REMARK 3 L13: 0.2767 L23: 0.2290 REMARK 3 S TENSOR REMARK 3 S11: -0.1976 S12: -0.3183 S13: -0.2571 REMARK 3 S21: 0.8820 S22: 0.1237 S23: 0.6019 REMARK 3 S31: 0.2058 S32: -0.2392 S33: 0.0008 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 327 THROUGH 520 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.2375 -19.5501 20.3352 REMARK 3 T TENSOR REMARK 3 T11: 0.1627 T22: 0.0910 REMARK 3 T33: 0.0978 T12: 0.0237 REMARK 3 T13: 0.0227 T23: -0.0463 REMARK 3 L TENSOR REMARK 3 L11: 2.0270 L22: 1.6321 REMARK 3 L33: 2.4760 L12: 0.1409 REMARK 3 L13: 0.4721 L23: -0.1000 REMARK 3 S TENSOR REMARK 3 S11: -0.0101 S12: -0.0804 S13: -0.0895 REMARK 3 S21: 0.0521 S22: -0.1116 S23: 0.1700 REMARK 3 S31: -0.1421 S32: -0.0801 S33: 0.1182 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0842 -18.8882 -22.3313 REMARK 3 T TENSOR REMARK 3 T11: 0.5397 T22: 0.6054 REMARK 3 T33: 0.7109 T12: -0.0739 REMARK 3 T13: -0.0514 T23: -0.2293 REMARK 3 L TENSOR REMARK 3 L11: 2.0597 L22: 0.7298 REMARK 3 L33: 0.2162 L12: 1.1384 REMARK 3 L13: -0.2875 L23: -0.3105 REMARK 3 S TENSOR REMARK 3 S11: 0.0924 S12: -0.2400 S13: 0.3906 REMARK 3 S21: -0.2293 S22: -0.2591 S23: 0.6965 REMARK 3 S31: -0.2277 S32: -0.5181 S33: 0.1727 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 219 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4715 -36.8572 -21.7920 REMARK 3 T TENSOR REMARK 3 T11: 0.4738 T22: 0.7830 REMARK 3 T33: 0.9779 T12: -0.2416 REMARK 3 T13: -0.1498 T23: -0.2481 REMARK 3 L TENSOR REMARK 3 L11: 2.8285 L22: 0.1413 REMARK 3 L33: 0.0244 L12: -0.6250 REMARK 3 L13: -0.2786 L23: 0.0641 REMARK 3 S TENSOR REMARK 3 S11: 0.0835 S12: -0.1619 S13: 0.1147 REMARK 3 S21: -0.3867 S22: -0.1212 S23: 1.1272 REMARK 3 S31: 0.2355 S32: -0.2907 S33: -0.0118 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 290 THROUGH 397 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7954 -32.0395 -17.8588 REMARK 3 T TENSOR REMARK 3 T11: 0.2905 T22: 0.4290 REMARK 3 T33: 0.3817 T12: -0.0802 REMARK 3 T13: 0.0248 T23: -0.2461 REMARK 3 L TENSOR REMARK 3 L11: 1.6319 L22: 2.8255 REMARK 3 L33: 1.9303 L12: 0.3338 REMARK 3 L13: 0.2388 L23: -0.2871 REMARK 3 S TENSOR REMARK 3 S11: 0.0553 S12: 0.1949 S13: 0.1180 REMARK 3 S21: -0.2798 S22: -0.0308 S23: 0.7540 REMARK 3 S31: 0.0792 S32: -0.6003 S33: 0.0446 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 398 THROUGH 520 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.9326 -33.8144 -24.8745 REMARK 3 T TENSOR REMARK 3 T11: 0.1128 T22: 0.1746 REMARK 3 T33: 0.1040 T12: 0.0076 REMARK 3 T13: -0.0236 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 2.1962 L22: 2.1343 REMARK 3 L33: 3.3124 L12: 0.0459 REMARK 3 L13: -0.1629 L23: 0.0977 REMARK 3 S TENSOR REMARK 3 S11: 0.1432 S12: 0.2080 S13: 0.1311 REMARK 3 S21: -0.1042 S22: -0.2717 S23: 0.0969 REMARK 3 S31: -0.0157 S32: -0.1630 S33: 0.1147 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SIMILAR TO ANOTHER STRUCTURE WITH THIS REMARK 3 LIGAND BUT DIFFERENT SPACE GROUP. THE TWO MOLECULES IN THE REMARK 3 ASYMMETRIC UNIT HAVE THE SAME ORIENTATION AS CGAS IN THE DNA REMARK 3 COMPLEX. LIGAND DENSITY CLEAR. REMARK 4 REMARK 4 7FTT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1001405338. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000030 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41201 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 84.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.713 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.73 REMARK 200 R MERGE FOR SHELL (I) : 3.89200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: INHOUSE MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-12 MG/ML PROTEIN IN 25 MM TRIS/HCL REMARK 280 PH7.5, 500MM NACL, 2MM TCEP, SUPPLEMENTED WITH 10X MOLAR EXCESS REMARK 280 OF LIGAND AND, IF NEEDED, WITH 10 MM MGCL2 AND 5MM ATP, THEN REMARK 280 MIXED 1:1 WITH RESERVOIR OF THE PROCOMPLEX SCREEN. SEVERAL REMARK 280 CONDITIONS RESULTED IN CRYSTALS, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 109.38700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.11450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 109.38700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.11450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 161 REMARK 465 ARG A 255 REMARK 465 ASN A 256 REMARK 465 PRO A 257 REMARK 465 LYS A 258 REMARK 465 GLU A 259 REMARK 465 GLY A 303 REMARK 465 GLY A 304 REMARK 465 SER A 305 REMARK 465 ALA A 364 REMARK 465 LYS A 365 REMARK 465 GLU A 366 REMARK 465 GLY A 367 REMARK 465 ASN A 368 REMARK 465 GLY A 369 REMARK 465 PHE A 370 REMARK 465 GLN A 371 REMARK 465 GLU A 521 REMARK 465 PHE A 522 REMARK 465 ARG B 255 REMARK 465 ASN B 256 REMARK 465 PRO B 257 REMARK 465 LYS B 258 REMARK 465 ALA B 364 REMARK 465 LYS B 365 REMARK 465 GLU B 366 REMARK 465 GLY B 367 REMARK 465 ASN B 368 REMARK 465 GLY B 369 REMARK 465 PHE B 370 REMARK 465 GLN B 371 REMARK 465 GLU B 521 REMARK 465 PHE B 522 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 476 OE2 GLU A 509 2.01 REMARK 500 OG1 THR A 469 NH2 ARG A 512 2.11 REMARK 500 OG1 THR B 309 OD1 ASP B 319 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 372 CD GLU A 372 OE2 0.081 REMARK 500 GLU B 372 CD GLU B 372 OE2 0.078 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 174 21.17 -68.15 REMARK 500 ASN A 210 96.91 -163.81 REMARK 500 SER A 213 59.87 -110.70 REMARK 500 ARG A 246 -34.26 73.37 REMARK 500 SER A 313 -115.16 48.56 REMARK 500 ARG A 339 77.86 -69.95 REMARK 500 SER A 345 154.99 120.85 REMARK 500 LYS A 362 103.60 111.76 REMARK 500 CYS A 404 -168.02 -105.53 REMARK 500 CYS A 405 36.00 -141.92 REMARK 500 LYS A 427 176.16 -57.99 REMARK 500 PHE A 519 0.27 -67.64 REMARK 500 SER B 213 56.01 -106.02 REMARK 500 ARG B 246 -34.29 75.87 REMARK 500 GLU B 267 81.91 -152.85 REMARK 500 SER B 313 -126.80 59.41 REMARK 500 SER B 345 151.62 110.64 REMARK 500 LYS B 362 137.29 -177.46 REMARK 500 GLU B 373 68.94 -112.73 REMARK 500 ASN B 389 80.62 -160.57 REMARK 500 GLU B 402 49.31 -155.38 REMARK 500 PHE B 516 66.23 60.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 390 NE2 REMARK 620 2 CYS A 396 SG 115.9 REMARK 620 3 CYS A 397 SG 103.2 114.6 REMARK 620 4 CYS A 404 SG 107.3 107.8 107.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 390 NE2 REMARK 620 2 CYS B 396 SG 116.5 REMARK 620 3 CYS B 397 SG 108.2 115.2 REMARK 620 4 CYS B 404 SG 99.8 105.6 110.3 REMARK 620 N 1 2 3 DBREF 7FTT A 161 522 UNP Q8N884 CGAS_HUMAN 161 522 DBREF 7FTT B 161 522 UNP Q8N884 CGAS_HUMAN 161 522 SEQRES 1 A 362 GLY ALA SER LYS LEU ARG ALA VAL LEU GLU LYS LEU LYS SEQRES 2 A 362 LEU SER ARG ASP ASP ILE SER THR ALA ALA GLY MET VAL SEQRES 3 A 362 LYS GLY VAL VAL ASP HIS LEU LEU LEU ARG LEU LYS CYS SEQRES 4 A 362 ASP SER ALA PHE ARG GLY VAL GLY LEU LEU ASN THR GLY SEQRES 5 A 362 SER TYR TYR GLU HIS VAL LYS ILE SER ALA PRO ASN GLU SEQRES 6 A 362 PHE ASP VAL MET PHE LYS LEU GLU VAL PRO ARG ILE GLN SEQRES 7 A 362 LEU GLU GLU TYR SER ASN THR ARG ALA TYR TYR PHE VAL SEQRES 8 A 362 LYS PHE LYS ARG ASN PRO LYS GLU ASN PRO LEU SER GLN SEQRES 9 A 362 PHE LEU GLU GLY GLU ILE LEU SER ALA SER LYS MET LEU SEQRES 10 A 362 SER LYS PHE ARG LYS ILE ILE LYS GLU GLU ILE ASN ASP SEQRES 11 A 362 ILE LYS ASP THR ASP VAL ILE MET LYS ARG LYS ARG GLY SEQRES 12 A 362 GLY SER PRO ALA VAL THR LEU LEU ILE SER GLU LYS ILE SEQRES 13 A 362 SER VAL ASP ILE THR LEU ALA LEU GLU SER LYS SER SER SEQRES 14 A 362 TRP PRO ALA SER THR GLN GLU GLY LEU ARG ILE GLN ASN SEQRES 15 A 362 TRP LEU SER ALA LYS VAL ARG LYS GLN LEU ARG LEU LYS SEQRES 16 A 362 PRO PHE TYR LEU VAL PRO LYS HIS ALA LYS GLU GLY ASN SEQRES 17 A 362 GLY PHE GLN GLU GLU THR TRP ARG LEU SER PHE SER HIS SEQRES 18 A 362 ILE GLU LYS GLU ILE LEU ASN ASN HIS GLY LYS SER LYS SEQRES 19 A 362 THR CYS CYS GLU ASN LYS GLU GLU LYS CYS CYS ARG LYS SEQRES 20 A 362 ASP CYS LEU LYS LEU MET LYS TYR LEU LEU GLU GLN LEU SEQRES 21 A 362 LYS GLU ARG PHE LYS ASP LYS LYS HIS LEU ASP LYS PHE SEQRES 22 A 362 SER SER TYR HIS VAL LYS THR ALA PHE PHE HIS VAL CYS SEQRES 23 A 362 THR GLN ASN PRO GLN ASP SER GLN TRP ASP ARG LYS ASP SEQRES 24 A 362 LEU GLY LEU CYS PHE ASP ASN CYS VAL THR TYR PHE LEU SEQRES 25 A 362 GLN CYS LEU ARG THR GLU LYS LEU GLU ASN TYR PHE ILE SEQRES 26 A 362 PRO GLU PHE ASN LEU PHE SER SER ASN LEU ILE ASP LYS SEQRES 27 A 362 ARG SER LYS GLU PHE LEU THR LYS GLN ILE GLU TYR GLU SEQRES 28 A 362 ARG ASN ASN GLU PHE PRO VAL PHE ASP GLU PHE SEQRES 1 B 362 GLY ALA SER LYS LEU ARG ALA VAL LEU GLU LYS LEU LYS SEQRES 2 B 362 LEU SER ARG ASP ASP ILE SER THR ALA ALA GLY MET VAL SEQRES 3 B 362 LYS GLY VAL VAL ASP HIS LEU LEU LEU ARG LEU LYS CYS SEQRES 4 B 362 ASP SER ALA PHE ARG GLY VAL GLY LEU LEU ASN THR GLY SEQRES 5 B 362 SER TYR TYR GLU HIS VAL LYS ILE SER ALA PRO ASN GLU SEQRES 6 B 362 PHE ASP VAL MET PHE LYS LEU GLU VAL PRO ARG ILE GLN SEQRES 7 B 362 LEU GLU GLU TYR SER ASN THR ARG ALA TYR TYR PHE VAL SEQRES 8 B 362 LYS PHE LYS ARG ASN PRO LYS GLU ASN PRO LEU SER GLN SEQRES 9 B 362 PHE LEU GLU GLY GLU ILE LEU SER ALA SER LYS MET LEU SEQRES 10 B 362 SER LYS PHE ARG LYS ILE ILE LYS GLU GLU ILE ASN ASP SEQRES 11 B 362 ILE LYS ASP THR ASP VAL ILE MET LYS ARG LYS ARG GLY SEQRES 12 B 362 GLY SER PRO ALA VAL THR LEU LEU ILE SER GLU LYS ILE SEQRES 13 B 362 SER VAL ASP ILE THR LEU ALA LEU GLU SER LYS SER SER SEQRES 14 B 362 TRP PRO ALA SER THR GLN GLU GLY LEU ARG ILE GLN ASN SEQRES 15 B 362 TRP LEU SER ALA LYS VAL ARG LYS GLN LEU ARG LEU LYS SEQRES 16 B 362 PRO PHE TYR LEU VAL PRO LYS HIS ALA LYS GLU GLY ASN SEQRES 17 B 362 GLY PHE GLN GLU GLU THR TRP ARG LEU SER PHE SER HIS SEQRES 18 B 362 ILE GLU LYS GLU ILE LEU ASN ASN HIS GLY LYS SER LYS SEQRES 19 B 362 THR CYS CYS GLU ASN LYS GLU GLU LYS CYS CYS ARG LYS SEQRES 20 B 362 ASP CYS LEU LYS LEU MET LYS TYR LEU LEU GLU GLN LEU SEQRES 21 B 362 LYS GLU ARG PHE LYS ASP LYS LYS HIS LEU ASP LYS PHE SEQRES 22 B 362 SER SER TYR HIS VAL LYS THR ALA PHE PHE HIS VAL CYS SEQRES 23 B 362 THR GLN ASN PRO GLN ASP SER GLN TRP ASP ARG LYS ASP SEQRES 24 B 362 LEU GLY LEU CYS PHE ASP ASN CYS VAL THR TYR PHE LEU SEQRES 25 B 362 GLN CYS LEU ARG THR GLU LYS LEU GLU ASN TYR PHE ILE SEQRES 26 B 362 PRO GLU PHE ASN LEU PHE SER SER ASN LEU ILE ASP LYS SEQRES 27 B 362 ARG SER LYS GLU PHE LEU THR LYS GLN ILE GLU TYR GLU SEQRES 28 B 362 ARG ASN ASN GLU PHE PRO VAL PHE ASP GLU PHE HET ZN A 601 1 HET YPU A 602 25 HET ZN B 601 1 HET YPU B 602 25 HETNAM ZN ZINC ION HETNAM YPU 5-BROMO-N-{[(5P)-2-FLUORO-5-(1-METHYL-1H-PYRAZOL-4-YL) HETNAM 2 YPU PHENYL]METHYL}-2-HYDROXYBENZAMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 YPU 2(C18 H15 BR F N3 O2) FORMUL 7 HOH *6(H2 O) HELIX 1 AA1 ALA A 162 ASP A 177 1 16 HELIX 2 AA2 THR A 181 ASP A 200 1 20 HELIX 3 AA3 SER A 201 ARG A 204 5 4 HELIX 4 AA4 ASN A 260 GLN A 264 5 5 HELIX 5 AA5 SER A 272 ILE A 288 1 17 HELIX 6 AA6 ASN A 289 ILE A 291 5 3 HELIX 7 AA7 PRO A 331 GLN A 335 5 5 HELIX 8 AA8 SER A 345 LEU A 354 1 10 HELIX 9 AA9 PHE A 379 ASN A 389 1 11 HELIX 10 AB1 ASN A 399 LYS A 403 5 5 HELIX 11 AB2 CYS A 405 PHE A 424 1 20 HELIX 12 AB3 SER A 434 ASN A 449 1 16 HELIX 13 AB4 GLN A 451 LYS A 458 5 8 HELIX 14 AB5 ASP A 459 GLU A 478 1 20 HELIX 15 AB6 ASP A 497 ASN A 514 1 18 HELIX 16 AB7 GLU A 515 ASP A 520 5 6 HELIX 17 AB8 ALA B 162 ASP B 178 1 17 HELIX 18 AB9 THR B 181 CYS B 199 1 19 HELIX 19 AC1 ASP B 200 ARG B 204 5 5 HELIX 20 AC2 SER B 243 THR B 245 5 3 HELIX 21 AC3 LEU B 262 GLN B 264 5 3 HELIX 22 AC4 SER B 272 ASN B 289 1 18 HELIX 23 AC5 PRO B 331 GLN B 335 5 5 HELIX 24 AC6 SER B 345 LYS B 355 1 11 HELIX 25 AC7 PHE B 379 ASN B 388 1 10 HELIX 26 AC8 CYS B 405 PHE B 424 1 20 HELIX 27 AC9 SER B 434 ASN B 449 1 16 HELIX 28 AD1 GLN B 451 LYS B 458 5 8 HELIX 29 AD2 ASP B 459 GLU B 478 1 20 HELIX 30 AD3 ASP B 497 ASN B 514 1 18 HELIX 31 AD4 GLU B 515 ASP B 520 5 6 SHEET 1 AA1 7 GLY A 207 LEU A 208 0 SHEET 2 AA1 7 GLU A 225 GLU A 233 -1 O LYS A 231 N GLY A 207 SHEET 3 AA1 7 ILE A 316 SER A 326 1 O THR A 321 N PHE A 230 SHEET 4 AA1 7 PHE A 357 PRO A 361 -1 O LEU A 359 N LEU A 324 SHEET 5 AA1 7 TRP A 375 SER A 378 -1 O SER A 378 N TYR A 358 SHEET 6 AA1 7 TYR A 248 LYS A 252 -1 N TYR A 249 O TRP A 375 SHEET 7 AA1 7 GLN A 238 GLU A 241 -1 N GLU A 240 O PHE A 250 SHEET 1 AA2 5 GLY A 207 LEU A 208 0 SHEET 2 AA2 5 GLU A 225 GLU A 233 -1 O LYS A 231 N GLY A 207 SHEET 3 AA2 5 ILE A 316 SER A 326 1 O THR A 321 N PHE A 230 SHEET 4 AA2 5 VAL A 308 ILE A 312 -1 N VAL A 308 O ILE A 320 SHEET 5 AA2 5 VAL A 296 MET A 298 -1 N ILE A 297 O LEU A 311 SHEET 1 AA3 2 LEU A 266 GLU A 267 0 SHEET 2 AA3 2 ILE A 270 LEU A 271 -1 O ILE A 270 N GLU A 267 SHEET 1 AA4 7 GLY B 207 LEU B 208 0 SHEET 2 AA4 7 GLU B 225 GLU B 233 -1 O LYS B 231 N GLY B 207 SHEET 3 AA4 7 ILE B 316 SER B 326 1 O THR B 321 N PHE B 230 SHEET 4 AA4 7 PHE B 357 PRO B 361 -1 O PHE B 357 N SER B 326 SHEET 5 AA4 7 TRP B 375 SER B 378 -1 O ARG B 376 N VAL B 360 SHEET 6 AA4 7 TYR B 248 LYS B 252 -1 N TYR B 249 O TRP B 375 SHEET 7 AA4 7 GLN B 238 GLU B 241 -1 N GLN B 238 O LYS B 252 SHEET 1 AA5 5 GLY B 207 LEU B 208 0 SHEET 2 AA5 5 GLU B 225 GLU B 233 -1 O LYS B 231 N GLY B 207 SHEET 3 AA5 5 ILE B 316 SER B 326 1 O THR B 321 N PHE B 230 SHEET 4 AA5 5 VAL B 308 ILE B 312 -1 N VAL B 308 O ILE B 320 SHEET 5 AA5 5 VAL B 296 LYS B 299 -1 N LYS B 299 O THR B 309 SHEET 1 AA6 2 LEU B 266 GLU B 267 0 SHEET 2 AA6 2 ILE B 270 LEU B 271 -1 O ILE B 270 N GLU B 267 LINK NE2 HIS A 390 ZN ZN A 601 1555 1555 1.96 LINK SG CYS A 396 ZN ZN A 601 1555 1555 2.39 LINK SG CYS A 397 ZN ZN A 601 1555 1555 2.30 LINK SG CYS A 404 ZN ZN A 601 1555 1555 2.25 LINK NE2 HIS B 390 ZN ZN B 601 1555 1555 1.93 LINK SG CYS B 396 ZN ZN B 601 1555 1555 2.37 LINK SG CYS B 397 ZN ZN B 601 1555 1555 2.25 LINK SG CYS B 404 ZN ZN B 601 1555 1555 2.25 CISPEP 1 SER B 305 PRO B 306 0 11.97 CRYST1 218.774 46.229 89.751 90.00 110.39 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004571 0.000000 0.001699 0.00000 SCALE2 0.000000 0.021631 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011887 0.00000