HEADER TRANSFERASE 08-FEB-23 7FUD TITLE CRYSTAL STRUCTURE OF HUMAN CYCLIC GMP-AMP SYNTHASE IN COMPLEX WITH 5- TITLE 2 BENZYL-2-[[2-CHLORO-5-(1-METHYLPYRAZOL-3-YL)PHENYL]METHYLAMINO]-4H- TITLE 3 [1,2,4]TRIAZOLO[1,5-A]PYRIMIDIN-7-ONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 161-522; COMPND 5 SYNONYM: CGAMP SYNTHASE,CGAS,H-CGAS,2'3'-CGAMP SYNTHASE,MAB-21 COMPND 6 DOMAIN-CONTAINING PROTEIN 1; COMPND 7 EC: 2.7.7.86; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CGAS, C6ORF150, MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A_CGAS(161-522_WT) KEYWDS IMMUNE RESPONSE, TRANSFERASE, NTASE, DNA SENSOR EXPDTA X-RAY DIFFRACTION AUTHOR L.LEIBROCK,J.BENZ,K.GROEBKE-ZBINDEN,M.G.RUDOLPH REVDAT 1 21-FEB-24 7FUD 0 JRNL AUTH K.GROEBKE-ZBINDEN,A.VANDEMEULEBROUCKE,M.HILBERT,M.G.RUDOLPH JRNL TITL CRYSTAL STRUCTURE OF A HUMAN CYCLIC GMP-AMP SYNTHASE COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15RC1_3423 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 76.3 REMARK 3 NUMBER OF REFLECTIONS : 40121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.150 REMARK 3 FREE R VALUE TEST SET COUNT : 2066 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.4835 - 4.9953 0.98 3396 210 0.1700 0.2106 REMARK 3 2 4.9953 - 3.9653 0.99 3331 189 0.1439 0.1999 REMARK 3 3 3.9653 - 3.4642 0.99 3318 175 0.1681 0.2606 REMARK 3 4 3.4642 - 3.1475 0.99 3328 173 0.2029 0.2568 REMARK 3 5 3.1475 - 2.9219 1.00 3327 171 0.2382 0.2470 REMARK 3 6 2.9219 - 2.7496 1.00 3330 162 0.2394 0.2787 REMARK 3 7 2.7496 - 2.6119 1.00 3307 166 0.2293 0.2894 REMARK 3 8 2.6119 - 2.4982 1.00 3276 191 0.2447 0.3185 REMARK 3 9 2.4982 - 2.4021 0.99 3311 158 0.2587 0.3575 REMARK 3 10 2.4021 - 2.3192 0.87 2824 170 0.2636 0.3697 REMARK 3 11 2.3192 - 2.2467 0.72 2396 132 0.2871 0.3538 REMARK 3 12 2.2467 - 2.1824 0.51 1656 96 0.2992 0.3023 REMARK 3 13 2.1824 - 2.1250 0.26 867 51 0.3194 0.3660 REMARK 3 14 2.1250 - 2.0731 0.09 303 18 0.3168 0.2517 REMARK 3 15 2.0731 - 2.0260 0.03 85 4 0.3004 0.3946 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.4189 -35.8337 16.9323 REMARK 3 T TENSOR REMARK 3 T11: 0.4915 T22: 0.4447 REMARK 3 T33: 0.3555 T12: -0.0284 REMARK 3 T13: -0.0064 T23: 0.1745 REMARK 3 L TENSOR REMARK 3 L11: 7.7718 L22: 3.7338 REMARK 3 L33: 0.7656 L12: 1.1369 REMARK 3 L13: 0.0262 L23: 1.3542 REMARK 3 S TENSOR REMARK 3 S11: 0.2525 S12: 0.0447 S13: -1.2431 REMARK 3 S21: -0.0686 S22: -0.2120 S23: -0.4639 REMARK 3 S31: 0.2875 S32: 0.2275 S33: -0.0070 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.8424 -15.8099 22.8294 REMARK 3 T TENSOR REMARK 3 T11: 0.3626 T22: 0.6903 REMARK 3 T33: 0.8108 T12: -0.1937 REMARK 3 T13: -0.0399 T23: 0.1701 REMARK 3 L TENSOR REMARK 3 L11: 1.6291 L22: 4.1323 REMARK 3 L33: 2.8485 L12: -2.1348 REMARK 3 L13: -0.9476 L23: 0.0816 REMARK 3 S TENSOR REMARK 3 S11: -0.0484 S12: -0.0044 S13: 0.1993 REMARK 3 S21: -0.1214 S22: 0.0776 S23: -1.1168 REMARK 3 S31: -0.2503 S32: 0.7223 S33: -0.0874 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.5332 -25.3889 10.0617 REMARK 3 T TENSOR REMARK 3 T11: 0.5485 T22: 0.7459 REMARK 3 T33: 0.7828 T12: 0.0367 REMARK 3 T13: 0.2080 T23: 0.1520 REMARK 3 L TENSOR REMARK 3 L11: 4.7358 L22: 2.5266 REMARK 3 L33: 8.4859 L12: -0.4922 REMARK 3 L13: -1.3194 L23: 4.3834 REMARK 3 S TENSOR REMARK 3 S11: 0.0265 S12: 0.7440 S13: 0.0343 REMARK 3 S21: -0.6272 S22: -0.3440 S23: 0.0710 REMARK 3 S31: 0.0213 S32: 1.4177 S33: 0.1143 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.4388 -19.3532 26.7869 REMARK 3 T TENSOR REMARK 3 T11: 0.2877 T22: 0.3320 REMARK 3 T33: 0.3090 T12: -0.0248 REMARK 3 T13: -0.0786 T23: 0.1049 REMARK 3 L TENSOR REMARK 3 L11: 2.4936 L22: 2.0626 REMARK 3 L33: 3.6801 L12: -0.1798 REMARK 3 L13: -1.2437 L23: -0.2323 REMARK 3 S TENSOR REMARK 3 S11: 0.0809 S12: -0.0406 S13: 0.1491 REMARK 3 S21: 0.1209 S22: -0.1416 S23: -0.3294 REMARK 3 S31: -0.0555 S32: 0.4492 S33: -0.0085 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 406 THROUGH 520 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.3127 -17.6894 14.7727 REMARK 3 T TENSOR REMARK 3 T11: 0.2574 T22: 0.2513 REMARK 3 T33: 0.2104 T12: 0.0798 REMARK 3 T13: 0.0143 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 2.7260 L22: 2.8881 REMARK 3 L33: 4.2477 L12: 0.1236 REMARK 3 L13: 0.7270 L23: -0.2165 REMARK 3 S TENSOR REMARK 3 S11: 0.1330 S12: 0.3978 S13: 0.0139 REMARK 3 S21: -0.3610 S22: -0.1490 S23: -0.0236 REMARK 3 S31: 0.0708 S32: 0.1018 S33: 0.0657 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.1627 -12.9996 66.3371 REMARK 3 T TENSOR REMARK 3 T11: 0.6442 T22: 0.5005 REMARK 3 T33: 0.5403 T12: -0.0224 REMARK 3 T13: -0.0820 T23: 0.1008 REMARK 3 L TENSOR REMARK 3 L11: 4.6036 L22: 8.1761 REMARK 3 L33: 5.9555 L12: 4.2733 REMARK 3 L13: 4.9884 L23: 3.5165 REMARK 3 S TENSOR REMARK 3 S11: -1.1076 S12: 0.3107 S13: 1.4512 REMARK 3 S21: -0.2472 S22: 0.1427 S23: 0.4800 REMARK 3 S31: -0.9269 S32: 1.0017 S33: 0.7344 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 182 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.0012 -30.8518 61.6521 REMARK 3 T TENSOR REMARK 3 T11: 0.4235 T22: 0.7787 REMARK 3 T33: 0.8196 T12: 0.2042 REMARK 3 T13: 0.0323 T23: 0.2145 REMARK 3 L TENSOR REMARK 3 L11: 2.6520 L22: 4.2445 REMARK 3 L33: 3.2801 L12: 1.9773 REMARK 3 L13: 0.2816 L23: 0.7155 REMARK 3 S TENSOR REMARK 3 S11: 0.0929 S12: 0.1245 S13: -0.1082 REMARK 3 S21: -0.1595 S22: 0.1320 S23: -1.1595 REMARK 3 S31: 0.0113 S32: 0.6538 S33: -0.1429 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 290 THROUGH 315 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.6853 -21.1527 74.9384 REMARK 3 T TENSOR REMARK 3 T11: 0.7125 T22: 1.0227 REMARK 3 T33: 0.7320 T12: 0.0206 REMARK 3 T13: -0.1340 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 6.6456 L22: 5.0476 REMARK 3 L33: 6.0870 L12: 0.4743 REMARK 3 L13: 0.8523 L23: 1.5355 REMARK 3 S TENSOR REMARK 3 S11: -0.0349 S12: -0.4583 S13: 0.1822 REMARK 3 S21: 1.2760 S22: -0.0673 S23: -0.6272 REMARK 3 S31: 0.0410 S32: 0.5012 S33: -0.0483 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 316 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.6311 -32.0519 53.0644 REMARK 3 T TENSOR REMARK 3 T11: 0.3084 T22: 0.3477 REMARK 3 T33: 0.2819 T12: -0.0023 REMARK 3 T13: 0.0922 T23: 0.0824 REMARK 3 L TENSOR REMARK 3 L11: 2.9183 L22: 2.2789 REMARK 3 L33: 3.0188 L12: -0.4059 REMARK 3 L13: 0.7310 L23: 0.4162 REMARK 3 S TENSOR REMARK 3 S11: 0.0260 S12: 0.0545 S13: -0.1715 REMARK 3 S21: -0.2416 S22: 0.0305 S23: -0.3116 REMARK 3 S31: 0.1135 S32: 0.3693 S33: -0.0618 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 406 THROUGH 520 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.5942 -33.0330 67.1179 REMARK 3 T TENSOR REMARK 3 T11: 0.2875 T22: 0.2746 REMARK 3 T33: 0.2716 T12: -0.0688 REMARK 3 T13: -0.0269 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 2.7650 L22: 2.8673 REMARK 3 L33: 4.3556 L12: 0.1267 REMARK 3 L13: -1.1713 L23: 0.5989 REMARK 3 S TENSOR REMARK 3 S11: 0.0790 S12: -0.2701 S13: 0.0053 REMARK 3 S21: 0.2487 S22: -0.0717 S23: -0.0830 REMARK 3 S31: 0.0436 S32: 0.1135 S33: -0.0158 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ORIENTATION OF METHYLPYRAZOLE COULD BE REMARK 3 180 DEG ROTATED: METHYL NOT VISIBLE IN ELECTRON DENSITY REMARK 4 REMARK 4 7FUD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1001405358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000050 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52253 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 81.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.367 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.38 REMARK 200 R MERGE FOR SHELL (I) : 2.89400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.380 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: INHOUSE MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-12 MG/ML PROTEIN IN 25 MM TRIS/HCL REMARK 280 PH7.5, 500MM NACL, 2MM TCEP, SUPPLEMENTED WITH 10X MOLAR EXCESS REMARK 280 OF LIGAND AND, IF NEEDED, WITH 10 MM MGCL2 AND 5MM ATP, THEN REMARK 280 MIXED 1:1 WITH RESERVOIR OF THE PROCOMPLEX SCREEN. SEVERAL REMARK 280 CONDITIONS RESULTED IN CRYSTALS, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 109.17000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 109.17000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 212 REMARK 465 SER A 213 REMARK 465 TYR A 214 REMARK 465 ARG A 255 REMARK 465 ASN A 256 REMARK 465 GLU A 366 REMARK 465 GLY A 367 REMARK 465 ASN A 368 REMARK 465 GLY A 369 REMARK 465 GLU A 521 REMARK 465 PHE A 522 REMARK 465 GLY B 212 REMARK 465 SER B 213 REMARK 465 TYR B 214 REMARK 465 TYR B 215 REMARK 465 ARG B 255 REMARK 465 ASN B 256 REMARK 465 PRO B 257 REMARK 465 GLU B 366 REMARK 465 GLY B 367 REMARK 465 ASN B 368 REMARK 465 GLY B 369 REMARK 465 PHE B 370 REMARK 465 GLU B 521 REMARK 465 PHE B 522 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 400 O GLU B 401 4446 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 246 -12.51 67.20 REMARK 500 GLN A 264 -9.72 -59.06 REMARK 500 SER A 313 -118.53 49.40 REMARK 500 LYS A 315 -28.00 69.86 REMARK 500 SER A 345 159.51 110.88 REMARK 500 LYS A 362 133.87 -172.13 REMARK 500 GLU A 373 68.64 -110.86 REMARK 500 ASN A 389 72.32 -157.69 REMARK 500 ASN B 244 10.30 57.16 REMARK 500 ARG B 246 -21.88 66.87 REMARK 500 PRO B 261 5.89 -67.52 REMARK 500 GLU B 267 74.35 -110.69 REMARK 500 ASP B 290 36.16 -97.80 REMARK 500 SER B 313 -133.70 49.94 REMARK 500 TRP B 343 -64.98 -106.34 REMARK 500 SER B 345 152.05 102.32 REMARK 500 GLU B 373 66.54 -104.55 REMARK 500 ASN B 389 70.83 -159.40 REMARK 500 ASP B 459 32.20 -98.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 390 NE2 REMARK 620 2 CYS A 396 SG 115.3 REMARK 620 3 CYS A 397 SG 102.9 129.6 REMARK 620 4 CYS A 404 SG 97.2 101.4 105.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 390 NE2 REMARK 620 2 CYS B 396 SG 112.2 REMARK 620 3 CYS B 397 SG 103.3 129.1 REMARK 620 4 CYS B 404 SG 97.6 103.0 107.2 REMARK 620 N 1 2 3 DBREF 7FUD A 161 522 UNP Q8N884 CGAS_HUMAN 161 522 DBREF 7FUD B 161 522 UNP Q8N884 CGAS_HUMAN 161 522 SEQRES 1 A 362 GLY ALA SER LYS LEU ARG ALA VAL LEU GLU LYS LEU LYS SEQRES 2 A 362 LEU SER ARG ASP ASP ILE SER THR ALA ALA GLY MET VAL SEQRES 3 A 362 LYS GLY VAL VAL ASP HIS LEU LEU LEU ARG LEU LYS CYS SEQRES 4 A 362 ASP SER ALA PHE ARG GLY VAL GLY LEU LEU ASN THR GLY SEQRES 5 A 362 SER TYR TYR GLU HIS VAL LYS ILE SER ALA PRO ASN GLU SEQRES 6 A 362 PHE ASP VAL MET PHE LYS LEU GLU VAL PRO ARG ILE GLN SEQRES 7 A 362 LEU GLU GLU TYR SER ASN THR ARG ALA TYR TYR PHE VAL SEQRES 8 A 362 LYS PHE LYS ARG ASN PRO LYS GLU ASN PRO LEU SER GLN SEQRES 9 A 362 PHE LEU GLU GLY GLU ILE LEU SER ALA SER LYS MET LEU SEQRES 10 A 362 SER LYS PHE ARG LYS ILE ILE LYS GLU GLU ILE ASN ASP SEQRES 11 A 362 ILE LYS ASP THR ASP VAL ILE MET LYS ARG LYS ARG GLY SEQRES 12 A 362 GLY SER PRO ALA VAL THR LEU LEU ILE SER GLU LYS ILE SEQRES 13 A 362 SER VAL ASP ILE THR LEU ALA LEU GLU SER LYS SER SER SEQRES 14 A 362 TRP PRO ALA SER THR GLN GLU GLY LEU ARG ILE GLN ASN SEQRES 15 A 362 TRP LEU SER ALA LYS VAL ARG LYS GLN LEU ARG LEU LYS SEQRES 16 A 362 PRO PHE TYR LEU VAL PRO LYS HIS ALA LYS GLU GLY ASN SEQRES 17 A 362 GLY PHE GLN GLU GLU THR TRP ARG LEU SER PHE SER HIS SEQRES 18 A 362 ILE GLU LYS GLU ILE LEU ASN ASN HIS GLY LYS SER LYS SEQRES 19 A 362 THR CYS CYS GLU ASN LYS GLU GLU LYS CYS CYS ARG LYS SEQRES 20 A 362 ASP CYS LEU LYS LEU MET LYS TYR LEU LEU GLU GLN LEU SEQRES 21 A 362 LYS GLU ARG PHE LYS ASP LYS LYS HIS LEU ASP LYS PHE SEQRES 22 A 362 SER SER TYR HIS VAL LYS THR ALA PHE PHE HIS VAL CYS SEQRES 23 A 362 THR GLN ASN PRO GLN ASP SER GLN TRP ASP ARG LYS ASP SEQRES 24 A 362 LEU GLY LEU CYS PHE ASP ASN CYS VAL THR TYR PHE LEU SEQRES 25 A 362 GLN CYS LEU ARG THR GLU LYS LEU GLU ASN TYR PHE ILE SEQRES 26 A 362 PRO GLU PHE ASN LEU PHE SER SER ASN LEU ILE ASP LYS SEQRES 27 A 362 ARG SER LYS GLU PHE LEU THR LYS GLN ILE GLU TYR GLU SEQRES 28 A 362 ARG ASN ASN GLU PHE PRO VAL PHE ASP GLU PHE SEQRES 1 B 362 GLY ALA SER LYS LEU ARG ALA VAL LEU GLU LYS LEU LYS SEQRES 2 B 362 LEU SER ARG ASP ASP ILE SER THR ALA ALA GLY MET VAL SEQRES 3 B 362 LYS GLY VAL VAL ASP HIS LEU LEU LEU ARG LEU LYS CYS SEQRES 4 B 362 ASP SER ALA PHE ARG GLY VAL GLY LEU LEU ASN THR GLY SEQRES 5 B 362 SER TYR TYR GLU HIS VAL LYS ILE SER ALA PRO ASN GLU SEQRES 6 B 362 PHE ASP VAL MET PHE LYS LEU GLU VAL PRO ARG ILE GLN SEQRES 7 B 362 LEU GLU GLU TYR SER ASN THR ARG ALA TYR TYR PHE VAL SEQRES 8 B 362 LYS PHE LYS ARG ASN PRO LYS GLU ASN PRO LEU SER GLN SEQRES 9 B 362 PHE LEU GLU GLY GLU ILE LEU SER ALA SER LYS MET LEU SEQRES 10 B 362 SER LYS PHE ARG LYS ILE ILE LYS GLU GLU ILE ASN ASP SEQRES 11 B 362 ILE LYS ASP THR ASP VAL ILE MET LYS ARG LYS ARG GLY SEQRES 12 B 362 GLY SER PRO ALA VAL THR LEU LEU ILE SER GLU LYS ILE SEQRES 13 B 362 SER VAL ASP ILE THR LEU ALA LEU GLU SER LYS SER SER SEQRES 14 B 362 TRP PRO ALA SER THR GLN GLU GLY LEU ARG ILE GLN ASN SEQRES 15 B 362 TRP LEU SER ALA LYS VAL ARG LYS GLN LEU ARG LEU LYS SEQRES 16 B 362 PRO PHE TYR LEU VAL PRO LYS HIS ALA LYS GLU GLY ASN SEQRES 17 B 362 GLY PHE GLN GLU GLU THR TRP ARG LEU SER PHE SER HIS SEQRES 18 B 362 ILE GLU LYS GLU ILE LEU ASN ASN HIS GLY LYS SER LYS SEQRES 19 B 362 THR CYS CYS GLU ASN LYS GLU GLU LYS CYS CYS ARG LYS SEQRES 20 B 362 ASP CYS LEU LYS LEU MET LYS TYR LEU LEU GLU GLN LEU SEQRES 21 B 362 LYS GLU ARG PHE LYS ASP LYS LYS HIS LEU ASP LYS PHE SEQRES 22 B 362 SER SER TYR HIS VAL LYS THR ALA PHE PHE HIS VAL CYS SEQRES 23 B 362 THR GLN ASN PRO GLN ASP SER GLN TRP ASP ARG LYS ASP SEQRES 24 B 362 LEU GLY LEU CYS PHE ASP ASN CYS VAL THR TYR PHE LEU SEQRES 25 B 362 GLN CYS LEU ARG THR GLU LYS LEU GLU ASN TYR PHE ILE SEQRES 26 B 362 PRO GLU PHE ASN LEU PHE SER SER ASN LEU ILE ASP LYS SEQRES 27 B 362 ARG SER LYS GLU PHE LEU THR LYS GLN ILE GLU TYR GLU SEQRES 28 B 362 ARG ASN ASN GLU PHE PRO VAL PHE ASP GLU PHE HET ZN A 601 1 HET YP8 A 602 32 HET ZN B 601 1 HET YP8 B 602 32 HETNAM ZN ZINC ION HETNAM YP8 (8S)-5-BENZYL-2-({[(5P)-2-CHLORO-5-(1-METHYL-1H- HETNAM 2 YP8 PYRAZOL-3-YL)PHENYL]METHYL}AMINO)[1,2,4]TRIAZOLO[1,5- HETNAM 3 YP8 A]PYRIMIDIN-7(4H)-ONE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 YP8 2(C23 H20 CL N7 O) FORMUL 7 HOH *149(H2 O) HELIX 1 AA1 GLY A 161 ASP A 177 1 17 HELIX 2 AA2 THR A 181 CYS A 199 1 19 HELIX 3 AA3 ASP A 200 ARG A 204 5 5 HELIX 4 AA4 LEU A 262 GLN A 264 5 3 HELIX 5 AA5 SER A 272 ASN A 289 1 18 HELIX 6 AA6 PRO A 331 GLN A 335 5 5 HELIX 7 AA7 SER A 345 LEU A 354 1 10 HELIX 8 AA8 HIS A 381 ASN A 388 1 8 HELIX 9 AA9 ASN A 399 LYS A 403 5 5 HELIX 10 AB1 CYS A 405 PHE A 424 1 20 HELIX 11 AB2 SER A 434 ASN A 449 1 16 HELIX 12 AB3 GLN A 451 LYS A 458 5 8 HELIX 13 AB4 ASP A 459 GLU A 478 1 20 HELIX 14 AB5 ASP A 497 ASN A 513 1 17 HELIX 15 AB6 ASN A 514 GLU A 515 5 2 HELIX 16 AB7 PHE A 516 ASP A 520 5 5 HELIX 17 AB8 ALA B 162 ASP B 178 1 17 HELIX 18 AB9 THR B 181 ASP B 200 1 20 HELIX 19 AC1 SER B 201 ARG B 204 5 4 HELIX 20 AC2 LEU B 262 GLN B 264 5 3 HELIX 21 AC3 SER B 272 ASP B 290 1 19 HELIX 22 AC4 PRO B 331 GLN B 335 5 5 HELIX 23 AC5 SER B 345 LYS B 355 1 11 HELIX 24 AC6 HIS B 381 ASN B 388 1 8 HELIX 25 AC7 ASN B 399 LYS B 403 5 5 HELIX 26 AC8 CYS B 405 PHE B 424 1 20 HELIX 27 AC9 SER B 434 ASN B 449 1 16 HELIX 28 AD1 GLN B 451 LYS B 458 5 8 HELIX 29 AD2 ASP B 459 GLU B 478 1 20 HELIX 30 AD3 ASP B 497 ASN B 514 1 18 HELIX 31 AD4 GLU B 515 ASP B 520 5 6 SHEET 1 AA1 7 GLY A 207 LEU A 208 0 SHEET 2 AA1 7 GLU A 225 GLU A 233 -1 O LYS A 231 N GLY A 207 SHEET 3 AA1 7 ILE A 316 SER A 326 1 O GLU A 325 N LEU A 232 SHEET 4 AA1 7 PHE A 357 PRO A 361 -1 O PHE A 357 N SER A 326 SHEET 5 AA1 7 TRP A 375 SER A 378 -1 O SER A 378 N TYR A 358 SHEET 6 AA1 7 TYR A 248 PHE A 253 -1 N TYR A 249 O TRP A 375 SHEET 7 AA1 7 ILE A 237 GLU A 241 -1 N GLN A 238 O LYS A 252 SHEET 1 AA2 5 GLY A 207 LEU A 208 0 SHEET 2 AA2 5 GLU A 225 GLU A 233 -1 O LYS A 231 N GLY A 207 SHEET 3 AA2 5 ILE A 316 SER A 326 1 O GLU A 325 N LEU A 232 SHEET 4 AA2 5 VAL A 308 ILE A 312 -1 N ILE A 312 O ILE A 316 SHEET 5 AA2 5 VAL A 296 MET A 298 -1 N ILE A 297 O LEU A 311 SHEET 1 AA3 2 LEU A 266 GLU A 267 0 SHEET 2 AA3 2 ILE A 270 LEU A 271 -1 O ILE A 270 N GLU A 267 SHEET 1 AA4 7 GLY B 207 LEU B 208 0 SHEET 2 AA4 7 GLU B 225 GLU B 233 -1 O LYS B 231 N GLY B 207 SHEET 3 AA4 7 ILE B 316 SER B 326 1 O THR B 321 N PHE B 230 SHEET 4 AA4 7 PHE B 357 PRO B 361 -1 O PHE B 357 N SER B 326 SHEET 5 AA4 7 TRP B 375 SER B 378 -1 O ARG B 376 N VAL B 360 SHEET 6 AA4 7 TYR B 248 LYS B 252 -1 N TYR B 249 O TRP B 375 SHEET 7 AA4 7 GLN B 238 GLU B 241 -1 N GLN B 238 O LYS B 252 SHEET 1 AA5 5 GLY B 207 LEU B 208 0 SHEET 2 AA5 5 GLU B 225 GLU B 233 -1 O LYS B 231 N GLY B 207 SHEET 3 AA5 5 ILE B 316 SER B 326 1 O THR B 321 N PHE B 230 SHEET 4 AA5 5 VAL B 308 ILE B 312 -1 N LEU B 310 O VAL B 318 SHEET 5 AA5 5 VAL B 296 LYS B 299 -1 N LYS B 299 O THR B 309 SHEET 1 AA6 2 LEU B 266 GLU B 267 0 SHEET 2 AA6 2 ILE B 270 LEU B 271 -1 O ILE B 270 N GLU B 267 LINK NE2 HIS A 390 ZN ZN A 601 1555 1555 2.10 LINK SG CYS A 396 ZN ZN A 601 1555 1555 2.38 LINK SG CYS A 397 ZN ZN A 601 1555 1555 2.36 LINK SG CYS A 404 ZN ZN A 601 1555 1555 2.39 LINK NE2 HIS B 390 ZN ZN B 601 1555 1555 2.12 LINK SG CYS B 396 ZN ZN B 601 1555 1555 2.34 LINK SG CYS B 397 ZN ZN B 601 1555 1555 2.38 LINK SG CYS B 404 ZN ZN B 601 1555 1555 2.30 CISPEP 1 SER A 305 PRO A 306 0 7.09 CISPEP 2 SER B 305 PRO B 306 0 -1.90 CRYST1 218.340 45.440 88.960 90.00 113.74 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004580 0.000000 0.002014 0.00000 SCALE2 0.000000 0.022007 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012280 0.00000