HEADER TRANSFERASE 08-FEB-23 7FUG TITLE CRYSTAL STRUCTURE OF HUMAN CYCLIC GMP-AMP SYNTHASE IN COMPLEX WITH 5- TITLE 2 BENZYL-2-[[2-CHLORO-5-(1-METHYLPYRAZOL-3-YL)PHENYL]METHYLAMINO]-4H- TITLE 3 [1,2,4]TRIAZOLO[1,5-A]PYRIMIDIN-7-ONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 161-522; COMPND 5 SYNONYM: CGAMP SYNTHASE,CGAS,H-CGAS,2'3'-CGAMP SYNTHASE,MAB-21 COMPND 6 DOMAIN-CONTAINING PROTEIN 1; COMPND 7 EC: 2.7.7.86; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CGAS, C6ORF150, MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A_CGAS(161-522_WT) KEYWDS IMMUNE RESPONSE, TRANSFERASE, NTASE, DNA SENSOR EXPDTA X-RAY DIFFRACTION AUTHOR L.LEIBROCK,J.BENZ,K.GROEBKE-ZBINDEN,M.G.RUDOLPH REVDAT 1 21-FEB-24 7FUG 0 JRNL AUTH K.GROEBKE-ZBINDEN,A.VANDEMEULEBROUCKE,M.HILBERT,M.G.RUDOLPH JRNL TITL CRYSTAL STRUCTURE OF A HUMAN CYCLIC GMP-AMP SYNTHASE COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3488 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 68.6 REMARK 3 NUMBER OF REFLECTIONS : 30012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 1431 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7649 - 4.5366 0.98 4133 207 0.1558 0.2025 REMARK 3 2 4.5366 - 3.6013 0.99 4124 233 0.1624 0.2097 REMARK 3 3 3.6013 - 3.1462 1.00 4154 214 0.2074 0.3010 REMARK 3 4 3.1462 - 2.8586 1.00 4149 191 0.2571 0.3086 REMARK 3 5 2.8586 - 2.6537 0.97 3999 213 0.2868 0.3650 REMARK 3 6 2.6537 - 2.4972 0.80 3341 156 0.2954 0.3502 REMARK 3 7 2.4972 - 2.3722 0.58 2426 103 0.3237 0.3425 REMARK 3 8 2.3722 - 2.2689 0.37 1526 85 0.3211 0.3989 REMARK 3 9 2.2689 - 2.1816 0.15 612 22 0.3445 0.4682 REMARK 3 10 2.1816 - 2.1063 0.03 117 7 0.2965 0.4832 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 39.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 67.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6644 14.4276 13.5944 REMARK 3 T TENSOR REMARK 3 T11: 0.5822 T22: 0.6016 REMARK 3 T33: 0.6583 T12: -0.0551 REMARK 3 T13: 0.0967 T23: 0.0361 REMARK 3 L TENSOR REMARK 3 L11: 0.9894 L22: 1.2594 REMARK 3 L33: 5.1034 L12: -0.3965 REMARK 3 L13: 0.3950 L23: 1.2288 REMARK 3 S TENSOR REMARK 3 S11: 0.0502 S12: -0.2687 S13: -0.5396 REMARK 3 S21: 0.1521 S22: -0.3506 S23: 0.3527 REMARK 3 S31: -0.0396 S32: -1.2079 S33: 0.0571 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 198 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.2431 18.5657 26.1937 REMARK 3 T TENSOR REMARK 3 T11: 0.8250 T22: 0.6459 REMARK 3 T33: 0.7377 T12: 0.0991 REMARK 3 T13: -0.0028 T23: 0.0805 REMARK 3 L TENSOR REMARK 3 L11: 5.4879 L22: 7.0412 REMARK 3 L33: 9.7374 L12: 0.5285 REMARK 3 L13: -1.3493 L23: 0.2881 REMARK 3 S TENSOR REMARK 3 S11: -0.0945 S12: 0.2205 S13: -0.0552 REMARK 3 S21: 0.2184 S22: 0.0396 S23: 0.9404 REMARK 3 S31: 1.0888 S32: -0.7983 S33: -0.1755 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 290 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9429 21.4171 33.9583 REMARK 3 T TENSOR REMARK 3 T11: 0.8717 T22: 0.5876 REMARK 3 T33: 0.4762 T12: 0.0344 REMARK 3 T13: -0.2373 T23: 0.0880 REMARK 3 L TENSOR REMARK 3 L11: 6.8248 L22: 5.3565 REMARK 3 L33: 6.5779 L12: 1.1364 REMARK 3 L13: -2.2355 L23: -2.2489 REMARK 3 S TENSOR REMARK 3 S11: 0.2727 S12: -0.6963 S13: -0.1309 REMARK 3 S21: 1.3593 S22: -0.0547 S23: -0.5265 REMARK 3 S31: 0.3743 S32: 0.8782 S33: 0.0383 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 291 THROUGH 315 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1979 5.4419 26.6446 REMARK 3 T TENSOR REMARK 3 T11: 1.0877 T22: 0.6757 REMARK 3 T33: 1.0835 T12: 0.0741 REMARK 3 T13: 0.0505 T23: 0.1093 REMARK 3 L TENSOR REMARK 3 L11: 4.5780 L22: 8.6035 REMARK 3 L33: 6.4663 L12: 1.4725 REMARK 3 L13: -1.0116 L23: -3.5113 REMARK 3 S TENSOR REMARK 3 S11: -0.3526 S12: -0.2587 S13: -1.1011 REMARK 3 S21: -0.5271 S22: 0.3513 S23: -0.1414 REMARK 3 S31: 1.2729 S32: -1.1234 S33: -0.1349 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 316 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2931 30.3937 19.8748 REMARK 3 T TENSOR REMARK 3 T11: 0.3362 T22: 0.2673 REMARK 3 T33: 0.3261 T12: 0.0368 REMARK 3 T13: 0.0283 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 3.2600 L22: 6.8184 REMARK 3 L33: 5.8909 L12: 0.4890 REMARK 3 L13: -0.7494 L23: -3.0544 REMARK 3 S TENSOR REMARK 3 S11: 0.0141 S12: -0.4584 S13: 0.2846 REMARK 3 S21: 0.5442 S22: -0.0398 S23: -0.5794 REMARK 3 S31: 0.1025 S32: 0.3737 S33: 0.0450 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 390 THROUGH 521 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5815 21.2196 1.9472 REMARK 3 T TENSOR REMARK 3 T11: 0.3306 T22: 0.2095 REMARK 3 T33: 0.2671 T12: 0.0734 REMARK 3 T13: 0.0991 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 3.3859 L22: 5.3739 REMARK 3 L33: 2.0769 L12: -1.5723 REMARK 3 L13: -0.7029 L23: 1.0803 REMARK 3 S TENSOR REMARK 3 S11: 0.2126 S12: 0.3187 S13: -0.2274 REMARK 3 S21: -0.4238 S22: -0.2773 S23: -0.2012 REMARK 3 S31: 0.2077 S32: 0.2964 S33: 0.0016 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1218 69.1091 18.1627 REMARK 3 T TENSOR REMARK 3 T11: 0.7505 T22: 0.7161 REMARK 3 T33: 0.8498 T12: -0.2017 REMARK 3 T13: -0.0165 T23: -0.1121 REMARK 3 L TENSOR REMARK 3 L11: 1.0394 L22: 0.7096 REMARK 3 L33: 6.3621 L12: 0.9448 REMARK 3 L13: 0.1507 L23: -0.0010 REMARK 3 S TENSOR REMARK 3 S11: 0.6470 S12: -0.5633 S13: 0.5635 REMARK 3 S21: 0.6518 S22: -0.2115 S23: -0.1361 REMARK 3 S31: -0.0979 S32: 0.4487 S33: 0.0625 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 198 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.5335 62.4003 32.8930 REMARK 3 T TENSOR REMARK 3 T11: 0.9253 T22: 0.8523 REMARK 3 T33: 0.6985 T12: -0.1102 REMARK 3 T13: 0.2247 T23: -0.1415 REMARK 3 L TENSOR REMARK 3 L11: 6.3692 L22: 4.5045 REMARK 3 L33: 8.3819 L12: -1.6670 REMARK 3 L13: 3.9686 L23: 3.4466 REMARK 3 S TENSOR REMARK 3 S11: 0.0111 S12: -1.1662 S13: 0.8055 REMARK 3 S21: 0.7595 S22: -0.0999 S23: -0.1714 REMARK 3 S31: -0.5722 S32: -0.2484 S33: -0.0714 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 308 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.1769 54.5352 20.2797 REMARK 3 T TENSOR REMARK 3 T11: 0.4260 T22: 0.3378 REMARK 3 T33: 0.4193 T12: -0.1261 REMARK 3 T13: 0.1020 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 3.1633 L22: 5.1906 REMARK 3 L33: 6.3604 L12: -2.0632 REMARK 3 L13: -1.4461 L23: 3.1072 REMARK 3 S TENSOR REMARK 3 S11: 0.1182 S12: -0.6147 S13: 0.0884 REMARK 3 S21: 0.8230 S22: -0.3489 S23: 0.4442 REMARK 3 S31: -0.3409 S32: -0.2170 S33: 0.2267 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 390 THROUGH 522 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6532 64.2147 3.3320 REMARK 3 T TENSOR REMARK 3 T11: 0.2980 T22: 0.1849 REMARK 3 T33: 0.4759 T12: 0.0396 REMARK 3 T13: -0.0146 T23: 0.0540 REMARK 3 L TENSOR REMARK 3 L11: 2.6923 L22: 6.6332 REMARK 3 L33: 3.2557 L12: -0.5501 REMARK 3 L13: -0.1789 L23: -1.2929 REMARK 3 S TENSOR REMARK 3 S11: 0.2812 S12: 0.2456 S13: 0.5206 REMARK 3 S21: -0.3818 S22: -0.0862 S23: 0.7024 REMARK 3 S31: -0.3924 S32: -0.3336 S33: -0.1223 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SECOND MOLECULE IN A.U. QUITE REMARK 3 DISORDERED. LIGANDS WELL DEFINED BY ELECTRON DENSITY. REMARK 4 REMARK 4 7FUG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1001405361. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000050 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43600 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.110 REMARK 200 RESOLUTION RANGE LOW (A) : 54.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.429 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.34 REMARK 200 R MERGE FOR SHELL (I) : 3.52400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: INHOUSE MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-12 MG/ML PROTEIN IN 25 MM TRIS/HCL REMARK 280 PH7.5, 500MM NACL, 2MM TCEP, SUPPLEMENTED WITH 10X MOLAR EXCESS REMARK 280 OF LIGAND AND, IF NEEDED, WITH 10 MM MGCL2 AND 5MM ATP, THEN REMARK 280 MIXED 1:1 WITH RESERVOIR OF THE PROCOMPLEX SCREEN. SEVERAL REMARK 280 CONDITIONS RESULTED IN CRYSTALS, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 78.30500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 211 REMARK 465 GLY A 212 REMARK 465 SER A 213 REMARK 465 TYR A 214 REMARK 465 TYR A 215 REMARK 465 ARG A 255 REMARK 465 ASN A 256 REMARK 465 PRO A 257 REMARK 465 LYS A 258 REMARK 465 ARG A 302 REMARK 465 GLY A 303 REMARK 465 LYS A 365 REMARK 465 GLU A 366 REMARK 465 GLY A 367 REMARK 465 ASN A 368 REMARK 465 GLY A 369 REMARK 465 PHE A 370 REMARK 465 GLN A 371 REMARK 465 PHE A 522 REMARK 465 THR B 211 REMARK 465 GLY B 212 REMARK 465 SER B 213 REMARK 465 TYR B 214 REMARK 465 TYR B 215 REMARK 465 ARG B 255 REMARK 465 ASN B 256 REMARK 465 PRO B 257 REMARK 465 LYS B 258 REMARK 465 ARG B 302 REMARK 465 GLY B 303 REMARK 465 GLY B 304 REMARK 465 SER B 305 REMARK 465 PRO B 306 REMARK 465 ALA B 307 REMARK 465 HIS B 363 REMARK 465 ALA B 364 REMARK 465 LYS B 365 REMARK 465 GLU B 366 REMARK 465 GLY B 367 REMARK 465 ASN B 368 REMARK 465 GLY B 369 REMARK 465 PHE B 370 REMARK 465 GLN B 371 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 179 121.99 -28.73 REMARK 500 SER A 180 48.18 -81.86 REMARK 500 SER A 243 47.09 36.45 REMARK 500 ARG A 246 -13.68 71.16 REMARK 500 ASN A 260 144.07 -170.52 REMARK 500 LYS A 292 40.35 -107.51 REMARK 500 SER A 313 -34.29 69.77 REMARK 500 GLU A 314 142.53 165.80 REMARK 500 LYS A 315 -18.00 65.54 REMARK 500 SER A 345 172.33 162.80 REMARK 500 GLU A 373 58.24 -91.22 REMARK 500 ILE B 179 124.59 -32.64 REMARK 500 SER B 243 50.07 34.93 REMARK 500 ARG B 246 -16.49 73.33 REMARK 500 SER B 313 -35.30 69.83 REMARK 500 GLU B 314 138.11 167.25 REMARK 500 LYS B 315 -17.45 69.57 REMARK 500 SER B 345 175.97 148.23 REMARK 500 GLU B 373 58.23 -95.49 REMARK 500 GLU B 521 3.69 56.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 178 ILE A 179 -133.74 REMARK 500 LEU A 344 SER A 345 147.39 REMARK 500 ASP B 178 ILE B 179 -133.88 REMARK 500 LEU B 344 SER B 345 146.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 390 NE2 REMARK 620 2 CYS A 396 SG 121.1 REMARK 620 3 CYS A 397 SG 92.9 121.4 REMARK 620 4 CYS A 404 SG 103.5 106.5 109.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 390 NE2 REMARK 620 2 CYS B 396 SG 112.5 REMARK 620 3 CYS B 397 SG 99.0 125.7 REMARK 620 4 CYS B 404 SG 100.7 104.8 111.5 REMARK 620 N 1 2 3 DBREF 7FUG A 161 522 UNP Q8N884 CGAS_HUMAN 161 522 DBREF 7FUG B 161 522 UNP Q8N884 CGAS_HUMAN 161 522 SEQRES 1 A 362 GLY ALA SER LYS LEU ARG ALA VAL LEU GLU LYS LEU LYS SEQRES 2 A 362 LEU SER ARG ASP ASP ILE SER THR ALA ALA GLY MET VAL SEQRES 3 A 362 LYS GLY VAL VAL ASP HIS LEU LEU LEU ARG LEU LYS CYS SEQRES 4 A 362 ASP SER ALA PHE ARG GLY VAL GLY LEU LEU ASN THR GLY SEQRES 5 A 362 SER TYR TYR GLU HIS VAL LYS ILE SER ALA PRO ASN GLU SEQRES 6 A 362 PHE ASP VAL MET PHE LYS LEU GLU VAL PRO ARG ILE GLN SEQRES 7 A 362 LEU GLU GLU TYR SER ASN THR ARG ALA TYR TYR PHE VAL SEQRES 8 A 362 LYS PHE LYS ARG ASN PRO LYS GLU ASN PRO LEU SER GLN SEQRES 9 A 362 PHE LEU GLU GLY GLU ILE LEU SER ALA SER LYS MET LEU SEQRES 10 A 362 SER LYS PHE ARG LYS ILE ILE LYS GLU GLU ILE ASN ASP SEQRES 11 A 362 ILE LYS ASP THR ASP VAL ILE MET LYS ARG LYS ARG GLY SEQRES 12 A 362 GLY SER PRO ALA VAL THR LEU LEU ILE SER GLU LYS ILE SEQRES 13 A 362 SER VAL ASP ILE THR LEU ALA LEU GLU SER LYS SER SER SEQRES 14 A 362 TRP PRO ALA SER THR GLN GLU GLY LEU ARG ILE GLN ASN SEQRES 15 A 362 TRP LEU SER ALA LYS VAL ARG LYS GLN LEU ARG LEU LYS SEQRES 16 A 362 PRO PHE TYR LEU VAL PRO LYS HIS ALA LYS GLU GLY ASN SEQRES 17 A 362 GLY PHE GLN GLU GLU THR TRP ARG LEU SER PHE SER HIS SEQRES 18 A 362 ILE GLU LYS GLU ILE LEU ASN ASN HIS GLY LYS SER LYS SEQRES 19 A 362 THR CYS CYS GLU ASN LYS GLU GLU LYS CYS CYS ARG LYS SEQRES 20 A 362 ASP CYS LEU LYS LEU MET LYS TYR LEU LEU GLU GLN LEU SEQRES 21 A 362 LYS GLU ARG PHE LYS ASP LYS LYS HIS LEU ASP LYS PHE SEQRES 22 A 362 SER SER TYR HIS VAL LYS THR ALA PHE PHE HIS VAL CYS SEQRES 23 A 362 THR GLN ASN PRO GLN ASP SER GLN TRP ASP ARG LYS ASP SEQRES 24 A 362 LEU GLY LEU CYS PHE ASP ASN CYS VAL THR TYR PHE LEU SEQRES 25 A 362 GLN CYS LEU ARG THR GLU LYS LEU GLU ASN TYR PHE ILE SEQRES 26 A 362 PRO GLU PHE ASN LEU PHE SER SER ASN LEU ILE ASP LYS SEQRES 27 A 362 ARG SER LYS GLU PHE LEU THR LYS GLN ILE GLU TYR GLU SEQRES 28 A 362 ARG ASN ASN GLU PHE PRO VAL PHE ASP GLU PHE SEQRES 1 B 362 GLY ALA SER LYS LEU ARG ALA VAL LEU GLU LYS LEU LYS SEQRES 2 B 362 LEU SER ARG ASP ASP ILE SER THR ALA ALA GLY MET VAL SEQRES 3 B 362 LYS GLY VAL VAL ASP HIS LEU LEU LEU ARG LEU LYS CYS SEQRES 4 B 362 ASP SER ALA PHE ARG GLY VAL GLY LEU LEU ASN THR GLY SEQRES 5 B 362 SER TYR TYR GLU HIS VAL LYS ILE SER ALA PRO ASN GLU SEQRES 6 B 362 PHE ASP VAL MET PHE LYS LEU GLU VAL PRO ARG ILE GLN SEQRES 7 B 362 LEU GLU GLU TYR SER ASN THR ARG ALA TYR TYR PHE VAL SEQRES 8 B 362 LYS PHE LYS ARG ASN PRO LYS GLU ASN PRO LEU SER GLN SEQRES 9 B 362 PHE LEU GLU GLY GLU ILE LEU SER ALA SER LYS MET LEU SEQRES 10 B 362 SER LYS PHE ARG LYS ILE ILE LYS GLU GLU ILE ASN ASP SEQRES 11 B 362 ILE LYS ASP THR ASP VAL ILE MET LYS ARG LYS ARG GLY SEQRES 12 B 362 GLY SER PRO ALA VAL THR LEU LEU ILE SER GLU LYS ILE SEQRES 13 B 362 SER VAL ASP ILE THR LEU ALA LEU GLU SER LYS SER SER SEQRES 14 B 362 TRP PRO ALA SER THR GLN GLU GLY LEU ARG ILE GLN ASN SEQRES 15 B 362 TRP LEU SER ALA LYS VAL ARG LYS GLN LEU ARG LEU LYS SEQRES 16 B 362 PRO PHE TYR LEU VAL PRO LYS HIS ALA LYS GLU GLY ASN SEQRES 17 B 362 GLY PHE GLN GLU GLU THR TRP ARG LEU SER PHE SER HIS SEQRES 18 B 362 ILE GLU LYS GLU ILE LEU ASN ASN HIS GLY LYS SER LYS SEQRES 19 B 362 THR CYS CYS GLU ASN LYS GLU GLU LYS CYS CYS ARG LYS SEQRES 20 B 362 ASP CYS LEU LYS LEU MET LYS TYR LEU LEU GLU GLN LEU SEQRES 21 B 362 LYS GLU ARG PHE LYS ASP LYS LYS HIS LEU ASP LYS PHE SEQRES 22 B 362 SER SER TYR HIS VAL LYS THR ALA PHE PHE HIS VAL CYS SEQRES 23 B 362 THR GLN ASN PRO GLN ASP SER GLN TRP ASP ARG LYS ASP SEQRES 24 B 362 LEU GLY LEU CYS PHE ASP ASN CYS VAL THR TYR PHE LEU SEQRES 25 B 362 GLN CYS LEU ARG THR GLU LYS LEU GLU ASN TYR PHE ILE SEQRES 26 B 362 PRO GLU PHE ASN LEU PHE SER SER ASN LEU ILE ASP LYS SEQRES 27 B 362 ARG SER LYS GLU PHE LEU THR LYS GLN ILE GLU TYR GLU SEQRES 28 B 362 ARG ASN ASN GLU PHE PRO VAL PHE ASP GLU PHE HET ZN A 601 1 HET YP8 A 602 32 HET ZN B 601 1 HET YP8 B 602 32 HETNAM ZN ZINC ION HETNAM YP8 (8S)-5-BENZYL-2-({[(5P)-2-CHLORO-5-(1-METHYL-1H- HETNAM 2 YP8 PYRAZOL-3-YL)PHENYL]METHYL}AMINO)[1,2,4]TRIAZOLO[1,5- HETNAM 3 YP8 A]PYRIMIDIN-7(4H)-ONE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 YP8 2(C23 H20 CL N7 O) FORMUL 7 HOH *47(H2 O) HELIX 1 AA1 GLY A 161 ASP A 177 1 17 HELIX 2 AA2 SER A 180 LYS A 198 1 19 HELIX 3 AA3 LEU A 262 GLN A 264 5 3 HELIX 4 AA4 SER A 272 ILE A 291 1 20 HELIX 5 AA5 PRO A 331 GLN A 335 5 5 HELIX 6 AA6 SER A 345 LEU A 354 1 10 HELIX 7 AA7 PHE A 379 ASN A 388 1 10 HELIX 8 AA8 ASN A 399 LYS A 403 5 5 HELIX 9 AA9 CYS A 405 PHE A 424 1 20 HELIX 10 AB1 SER A 434 ASN A 449 1 16 HELIX 11 AB2 GLN A 451 TRP A 455 5 5 HELIX 12 AB3 ASP A 456 LYS A 458 5 3 HELIX 13 AB4 ASP A 459 GLU A 478 1 20 HELIX 14 AB5 ASP A 497 ASN A 514 1 18 HELIX 15 AB6 GLU A 515 ASP A 520 5 6 HELIX 16 AB7 ALA B 162 ASP B 177 1 16 HELIX 17 AB8 ILE B 179 ALA B 182 5 4 HELIX 18 AB9 ALA B 183 LYS B 198 1 16 HELIX 19 AC1 ASN B 260 GLN B 264 5 5 HELIX 20 AC2 SER B 272 ILE B 291 1 20 HELIX 21 AC3 PRO B 331 GLN B 335 5 5 HELIX 22 AC4 SER B 345 ARG B 353 1 9 HELIX 23 AC5 HIS B 381 ASN B 389 1 9 HELIX 24 AC6 ASN B 399 LYS B 403 5 5 HELIX 25 AC7 CYS B 405 PHE B 424 1 20 HELIX 26 AC8 SER B 434 ASN B 449 1 16 HELIX 27 AC9 GLN B 451 LYS B 458 5 8 HELIX 28 AD1 ASP B 459 GLU B 478 1 20 HELIX 29 AD2 ASP B 497 ASN B 514 1 18 HELIX 30 AD3 GLU B 515 GLU B 521 5 7 SHEET 1 AA1 7 VAL A 206 LEU A 208 0 SHEET 2 AA1 7 GLU A 225 GLU A 233 -1 O LYS A 231 N GLY A 207 SHEET 3 AA1 7 ILE A 316 SER A 326 1 O SER A 317 N PHE A 226 SHEET 4 AA1 7 PHE A 357 PRO A 361 -1 O LEU A 359 N LEU A 324 SHEET 5 AA1 7 TRP A 375 SER A 378 -1 O ARG A 376 N VAL A 360 SHEET 6 AA1 7 TYR A 248 LYS A 252 -1 N TYR A 249 O TRP A 375 SHEET 7 AA1 7 GLN A 238 GLU A 241 -1 N GLN A 238 O LYS A 252 SHEET 1 AA2 5 VAL A 206 LEU A 208 0 SHEET 2 AA2 5 GLU A 225 GLU A 233 -1 O LYS A 231 N GLY A 207 SHEET 3 AA2 5 ILE A 316 SER A 326 1 O SER A 317 N PHE A 226 SHEET 4 AA2 5 VAL A 308 ILE A 312 -1 N ILE A 312 O ILE A 316 SHEET 5 AA2 5 VAL A 296 LYS A 299 -1 N LYS A 299 O THR A 309 SHEET 1 AA3 2 LEU A 266 GLU A 267 0 SHEET 2 AA3 2 ILE A 270 LEU A 271 -1 O ILE A 270 N GLU A 267 SHEET 1 AA4 7 VAL B 206 LEU B 208 0 SHEET 2 AA4 7 GLU B 225 GLU B 233 -1 O LYS B 231 N GLY B 207 SHEET 3 AA4 7 ILE B 316 SER B 326 1 O THR B 321 N PHE B 230 SHEET 4 AA4 7 PHE B 357 PRO B 361 -1 O PHE B 357 N SER B 326 SHEET 5 AA4 7 TRP B 375 SER B 378 -1 O ARG B 376 N VAL B 360 SHEET 6 AA4 7 TYR B 248 LYS B 252 -1 N TYR B 249 O TRP B 375 SHEET 7 AA4 7 GLN B 238 GLU B 241 -1 N GLN B 238 O LYS B 252 SHEET 1 AA5 5 VAL B 206 LEU B 208 0 SHEET 2 AA5 5 GLU B 225 GLU B 233 -1 O LYS B 231 N GLY B 207 SHEET 3 AA5 5 ILE B 316 SER B 326 1 O THR B 321 N PHE B 230 SHEET 4 AA5 5 THR B 309 ILE B 312 -1 N LEU B 310 O VAL B 318 SHEET 5 AA5 5 VAL B 296 LYS B 299 -1 N LYS B 299 O THR B 309 SHEET 1 AA6 2 LEU B 266 GLU B 267 0 SHEET 2 AA6 2 ILE B 270 LEU B 271 -1 O ILE B 270 N GLU B 267 LINK NE2 HIS A 390 ZN ZN A 601 1555 1555 2.10 LINK SG CYS A 396 ZN ZN A 601 1555 1555 2.30 LINK SG CYS A 397 ZN ZN A 601 1555 1555 2.21 LINK SG CYS A 404 ZN ZN A 601 1555 1555 2.28 LINK NE2 HIS B 390 ZN ZN B 601 1555 1555 1.96 LINK SG CYS B 396 ZN ZN B 601 1555 1555 2.36 LINK SG CYS B 397 ZN ZN B 601 1555 1555 2.30 LINK SG CYS B 404 ZN ZN B 601 1555 1555 2.35 CISPEP 1 SER A 305 PRO A 306 0 3.33 CRYST1 42.350 156.610 58.390 90.00 93.48 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023613 0.000000 0.001437 0.00000 SCALE2 0.000000 0.006385 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017158 0.00000