HEADER TRANSFERASE 08-FEB-23 7FUM TITLE CRYSTAL STRUCTURE OF HUMAN CYCLIC GMP-AMP SYNTHASE IN COMPLEX WITH 2- TITLE 2 [(4-BENZYLPIPERAZIN-1-YL)METHYL]-6-(2-CHLORO-4-METHYLPHENYL)-1H- TITLE 3 BENZIMIDAZOLE-4-CARBOXYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 161-522; COMPND 5 SYNONYM: CGAMP SYNTHASE,CGAS,H-CGAS,2'3'-CGAMP SYNTHASE,MAB-21 COMPND 6 DOMAIN-CONTAINING PROTEIN 1; COMPND 7 EC: 2.7.7.86; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CGAS, C6ORF150, MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A_CGAS(161-522_WT) KEYWDS IMMUNE RESPONSE, TRANSFERASE, NTASE, DNA SENSOR EXPDTA X-RAY DIFFRACTION AUTHOR L.LEIBROCK,J.BENZ,K.GROEBKE-ZBINDEN,G.GALLEY,M.G.RUDOLPH REVDAT 1 21-FEB-24 7FUM 0 JRNL AUTH K.GROEBKE-ZBINDEN,A.VANDEMEULEBROUCKE,M.HILBERT,M.G.RUDOLPH JRNL TITL CRYSTAL STRUCTURE OF A HUMAN CYCLIC GMP-AMP SYNTHASE COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.2 REMARK 3 NUMBER OF REFLECTIONS : 23459 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1142 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.17 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 12.37 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 470 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.4141 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 452 REMARK 3 BIN R VALUE (WORKING SET) : 0.4104 REMARK 3 BIN FREE R VALUE : 0.5129 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.83 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 18 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2832 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 53 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 87.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.62980 REMARK 3 B22 (A**2) : -4.07130 REMARK 3 B33 (A**2) : 4.70100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.340 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.253 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.205 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.254 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.208 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2938 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3941 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1084 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 483 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2938 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 365 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3197 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.10 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.78 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.41 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|161 - A|197 } REMARK 3 ORIGIN FOR THE GROUP (A): -11.1761 -17.1241 -25.9311 REMARK 3 T TENSOR REMARK 3 T11: -0.3539 T22: 0.0163 REMARK 3 T33: -0.1113 T12: 0.0603 REMARK 3 T13: 0.0494 T23: 0.0871 REMARK 3 L TENSOR REMARK 3 L11: 8.7403 L22: 10.0661 REMARK 3 L33: 3.3768 L12: -0.8088 REMARK 3 L13: -0.4715 L23: 0.3965 REMARK 3 S TENSOR REMARK 3 S11: -0.0908 S12: 1.1978 S13: -1.3157 REMARK 3 S21: -0.4340 S22: 0.0418 S23: 0.6878 REMARK 3 S31: -0.1542 S32: -0.8631 S33: 0.0490 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|198 - A|224 } REMARK 3 ORIGIN FOR THE GROUP (A): -3.8777 -27.4806 -22.8313 REMARK 3 T TENSOR REMARK 3 T11: -0.4234 T22: -0.1020 REMARK 3 T33: 0.3778 T12: -0.0054 REMARK 3 T13: 0.2412 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 9.0190 L22: 8.8289 REMARK 3 L33: 8.4082 L12: 2.5089 REMARK 3 L13: 2.3702 L23: 1.0157 REMARK 3 S TENSOR REMARK 3 S11: -0.1420 S12: 0.1820 S13: -1.1215 REMARK 3 S21: 0.3059 S22: -0.0650 S23: 0.0251 REMARK 3 S31: -0.2601 S32: -0.7604 S33: 0.2071 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|225 - A|272 } REMARK 3 ORIGIN FOR THE GROUP (A): 14.3477 -32.6642 -20.2618 REMARK 3 T TENSOR REMARK 3 T11: -0.3859 T22: -0.2612 REMARK 3 T33: 0.3670 T12: 0.1166 REMARK 3 T13: 0.1111 T23: 0.0570 REMARK 3 L TENSOR REMARK 3 L11: 4.4166 L22: 3.3040 REMARK 3 L33: 2.8898 L12: 1.6386 REMARK 3 L13: -0.7628 L23: 1.0154 REMARK 3 S TENSOR REMARK 3 S11: -0.1915 S12: -0.1133 S13: -1.6327 REMARK 3 S21: 0.1244 S22: 0.0444 S23: -0.8147 REMARK 3 S31: 0.4880 S32: 0.6638 S33: 0.1472 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|273 - A|307 } REMARK 3 ORIGIN FOR THE GROUP (A): 1.4534 -34.0850 -34.5322 REMARK 3 T TENSOR REMARK 3 T11: -0.1204 T22: -0.1870 REMARK 3 T33: 0.4840 T12: 0.0551 REMARK 3 T13: 0.2283 T23: -0.4499 REMARK 3 L TENSOR REMARK 3 L11: 1.4306 L22: 1.5520 REMARK 3 L33: 8.3674 L12: 3.6095 REMARK 3 L13: 4.9296 L23: 3.2324 REMARK 3 S TENSOR REMARK 3 S11: -0.0090 S12: 0.5824 S13: -0.6728 REMARK 3 S21: -1.2273 S22: -0.1190 S23: -0.2763 REMARK 3 S31: 0.4502 S32: 0.1264 S33: 0.1280 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|308 - A|379 } REMARK 3 ORIGIN FOR THE GROUP (A): 8.5378 -21.7014 -17.4711 REMARK 3 T TENSOR REMARK 3 T11: -0.3015 T22: -0.2225 REMARK 3 T33: -0.0295 T12: -0.0158 REMARK 3 T13: 0.0843 T23: 0.1114 REMARK 3 L TENSOR REMARK 3 L11: 6.6268 L22: 4.1392 REMARK 3 L33: 3.4182 L12: 0.0651 REMARK 3 L13: -1.0540 L23: 1.1799 REMARK 3 S TENSOR REMARK 3 S11: -0.1402 S12: 0.0740 S13: -0.8481 REMARK 3 S21: -0.0995 S22: 0.1493 S23: -0.3393 REMARK 3 S31: -0.1417 S32: 0.4067 S33: -0.0091 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { A|380 - A|520 } REMARK 3 ORIGIN FOR THE GROUP (A): 5.3220 -4.0382 -23.3299 REMARK 3 T TENSOR REMARK 3 T11: 0.0432 T22: -0.2473 REMARK 3 T33: -0.1439 T12: -0.0377 REMARK 3 T13: 0.1070 T23: 0.2041 REMARK 3 L TENSOR REMARK 3 L11: 5.0544 L22: 2.9484 REMARK 3 L33: 5.3280 L12: -0.3267 REMARK 3 L13: -1.3805 L23: -0.6505 REMARK 3 S TENSOR REMARK 3 S11: 0.4026 S12: 0.6753 S13: 0.7963 REMARK 3 S21: -0.5387 S22: 0.0357 S23: -0.1262 REMARK 3 S31: -0.9680 S32: -0.0168 S33: -0.4383 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: LIGAND WELL DEFINED BY ELECTRON REMARK 3 DENSITY, ALTHOUGH BENZYL GROUP MAY BE SOMEWHAT MORE FLEXIBLE REMARK 3 THAN REST OF LIGAND. REMARK 4 REMARK 4 7FUM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1001405367. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000050 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28304 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 59.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.423 REMARK 200 R MERGE (I) : 0.03600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.84 REMARK 200 R MERGE FOR SHELL (I) : 2.81500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: INHOUSE MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-12 MG/ML PROTEIN IN 25 MM TRIS/HCL REMARK 280 PH7.5, 500MM NACL, 2MM TCEP, SUPPLEMENTED WITH 10X MOLAR EXCESS REMARK 280 OF LIGAND AND, IF NEEDED, WITH 10 MM MGCL2 AND 5MM ATP, THEN REMARK 280 MIXED 1:1 WITH RESERVOIR OF THE PROCOMPLEX SCREEN. SEVERAL REMARK 280 CONDITIONS RESULTED IN CRYSTALS., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 22.48300 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.55950 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 22.48300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 82.55950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 254 REMARK 465 ARG A 255 REMARK 465 ASN A 256 REMARK 465 PRO A 257 REMARK 465 LYS A 258 REMARK 465 ILE A 291 REMARK 465 LYS A 292 REMARK 465 ASP A 293 REMARK 465 LYS A 365 REMARK 465 GLU A 366 REMARK 465 GLY A 367 REMARK 465 ASN A 368 REMARK 465 GLY A 369 REMARK 465 PHE A 370 REMARK 465 GLN A 371 REMARK 465 GLU A 521 REMARK 465 PHE A 522 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 300 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 210 72.30 61.89 REMARK 500 SER A 213 -143.62 -179.23 REMARK 500 TYR A 215 -10.72 82.85 REMARK 500 GLU A 216 133.74 76.86 REMARK 500 ARG A 246 -29.65 67.44 REMARK 500 SER A 313 -115.93 63.66 REMARK 500 TRP A 343 -60.67 -107.68 REMARK 500 SER A 345 159.94 96.37 REMARK 500 LYS A 362 134.30 -179.47 REMARK 500 GLU A 373 55.21 -91.01 REMARK 500 ASN A 389 65.70 -161.18 REMARK 500 PHE A 516 71.08 56.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 390 NE2 REMARK 620 2 CYS A 396 SG 109.8 REMARK 620 3 CYS A 397 SG 110.5 125.6 REMARK 620 4 CYS A 404 SG 98.4 99.1 109.4 REMARK 620 N 1 2 3 DBREF 7FUM A 161 522 UNP Q8N884 CGAS_HUMAN 161 522 SEQRES 1 A 362 GLY ALA SER LYS LEU ARG ALA VAL LEU GLU LYS LEU LYS SEQRES 2 A 362 LEU SER ARG ASP ASP ILE SER THR ALA ALA GLY MET VAL SEQRES 3 A 362 LYS GLY VAL VAL ASP HIS LEU LEU LEU ARG LEU LYS CYS SEQRES 4 A 362 ASP SER ALA PHE ARG GLY VAL GLY LEU LEU ASN THR GLY SEQRES 5 A 362 SER TYR TYR GLU HIS VAL LYS ILE SER ALA PRO ASN GLU SEQRES 6 A 362 PHE ASP VAL MET PHE LYS LEU GLU VAL PRO ARG ILE GLN SEQRES 7 A 362 LEU GLU GLU TYR SER ASN THR ARG ALA TYR TYR PHE VAL SEQRES 8 A 362 LYS PHE LYS ARG ASN PRO LYS GLU ASN PRO LEU SER GLN SEQRES 9 A 362 PHE LEU GLU GLY GLU ILE LEU SER ALA SER LYS MET LEU SEQRES 10 A 362 SER LYS PHE ARG LYS ILE ILE LYS GLU GLU ILE ASN ASP SEQRES 11 A 362 ILE LYS ASP THR ASP VAL ILE MET LYS ARG LYS ARG GLY SEQRES 12 A 362 GLY SER PRO ALA VAL THR LEU LEU ILE SER GLU LYS ILE SEQRES 13 A 362 SER VAL ASP ILE THR LEU ALA LEU GLU SER LYS SER SER SEQRES 14 A 362 TRP PRO ALA SER THR GLN GLU GLY LEU ARG ILE GLN ASN SEQRES 15 A 362 TRP LEU SER ALA LYS VAL ARG LYS GLN LEU ARG LEU LYS SEQRES 16 A 362 PRO PHE TYR LEU VAL PRO LYS HIS ALA LYS GLU GLY ASN SEQRES 17 A 362 GLY PHE GLN GLU GLU THR TRP ARG LEU SER PHE SER HIS SEQRES 18 A 362 ILE GLU LYS GLU ILE LEU ASN ASN HIS GLY LYS SER LYS SEQRES 19 A 362 THR CYS CYS GLU ASN LYS GLU GLU LYS CYS CYS ARG LYS SEQRES 20 A 362 ASP CYS LEU LYS LEU MET LYS TYR LEU LEU GLU GLN LEU SEQRES 21 A 362 LYS GLU ARG PHE LYS ASP LYS LYS HIS LEU ASP LYS PHE SEQRES 22 A 362 SER SER TYR HIS VAL LYS THR ALA PHE PHE HIS VAL CYS SEQRES 23 A 362 THR GLN ASN PRO GLN ASP SER GLN TRP ASP ARG LYS ASP SEQRES 24 A 362 LEU GLY LEU CYS PHE ASP ASN CYS VAL THR TYR PHE LEU SEQRES 25 A 362 GLN CYS LEU ARG THR GLU LYS LEU GLU ASN TYR PHE ILE SEQRES 26 A 362 PRO GLU PHE ASN LEU PHE SER SER ASN LEU ILE ASP LYS SEQRES 27 A 362 ARG SER LYS GLU PHE LEU THR LYS GLN ILE GLU TYR GLU SEQRES 28 A 362 ARG ASN ASN GLU PHE PRO VAL PHE ASP GLU PHE HET ZN A 601 1 HET YU6 A 602 34 HETNAM ZN ZINC ION HETNAM YU6 (5M)-2-[(4-BENZYLPIPERAZIN-1-YL)METHYL]-5-(2-CHLORO-4- HETNAM 2 YU6 METHYLPHENYL)-1H-BENZIMIDAZOLE-7-CARBOXYLIC ACID FORMUL 2 ZN ZN 2+ FORMUL 3 YU6 C27 H27 CL N4 O2 FORMUL 4 HOH *53(H2 O) HELIX 1 AA1 ALA A 162 ASP A 178 1 17 HELIX 2 AA2 THR A 181 LYS A 198 1 18 HELIX 3 AA3 ASN A 260 GLN A 264 5 5 HELIX 4 AA4 SER A 272 ASP A 290 1 19 HELIX 5 AA5 PRO A 331 GLN A 335 5 5 HELIX 6 AA6 SER A 345 LEU A 354 1 10 HELIX 7 AA7 HIS A 381 ASN A 388 1 8 HELIX 8 AA8 CYS A 405 PHE A 424 1 20 HELIX 9 AA9 SER A 434 ASN A 449 1 16 HELIX 10 AB1 GLN A 451 LYS A 458 5 8 HELIX 11 AB2 ASP A 459 GLU A 478 1 20 HELIX 12 AB3 ASP A 497 ASN A 513 1 17 HELIX 13 AB4 ASN A 514 GLU A 515 5 2 HELIX 14 AB5 PHE A 516 ASP A 520 5 5 SHEET 1 AA1 7 VAL A 206 LEU A 208 0 SHEET 2 AA1 7 GLU A 225 GLU A 233 -1 O LYS A 231 N GLY A 207 SHEET 3 AA1 7 ILE A 316 SER A 326 1 O SER A 317 N PHE A 226 SHEET 4 AA1 7 PHE A 357 PRO A 361 -1 O PHE A 357 N SER A 326 SHEET 5 AA1 7 TRP A 375 SER A 378 -1 O ARG A 376 N VAL A 360 SHEET 6 AA1 7 TYR A 248 LYS A 252 -1 N TYR A 249 O TRP A 375 SHEET 7 AA1 7 GLN A 238 GLU A 241 -1 N GLN A 238 O LYS A 252 SHEET 1 AA2 5 VAL A 206 LEU A 208 0 SHEET 2 AA2 5 GLU A 225 GLU A 233 -1 O LYS A 231 N GLY A 207 SHEET 3 AA2 5 ILE A 316 SER A 326 1 O SER A 317 N PHE A 226 SHEET 4 AA2 5 VAL A 308 ILE A 312 -1 N VAL A 308 O ILE A 320 SHEET 5 AA2 5 VAL A 296 MET A 298 -1 N ILE A 297 O LEU A 311 SHEET 1 AA3 2 LEU A 266 GLU A 267 0 SHEET 2 AA3 2 ILE A 270 LEU A 271 -1 O ILE A 270 N GLU A 267 LINK NE2 HIS A 390 ZN ZN A 601 1555 1555 2.09 LINK SG CYS A 396 ZN ZN A 601 1555 1555 2.27 LINK SG CYS A 397 ZN ZN A 601 1555 1555 2.26 LINK SG CYS A 404 ZN ZN A 601 1555 1555 2.52 CISPEP 1 SER A 305 PRO A 306 0 1.08 CRYST1 44.966 59.560 165.119 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022239 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016790 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006056 0.00000