HEADER TRANSCRIPTION 20-SEP-24 7HI8 TITLE PANDDA ANALYSIS GROUP DEPOSITION -- CRYSTAL STRUCTURE OF GROUND STATE TITLE 2 MODEL OF HUMAN BRACHYURY COMPND MOL_ID: 1; COMPND 2 MOLECULE: T-BOX TRANSCRIPTION FACTOR T; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BRACHYURY PROTEIN,PROTEIN T; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TBXT, T; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SGC - DIAMOND I04-1 FRAGMENT SCREENING, PANDDA, XCHEMEXPLORER, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.A.NEWMAN,A.E.GAVARD,L.SHERESTHA,N.A.BURGESS-BROWN,F.VON DELFT, AUTHOR 2 C.H.ARROWSMITH,A.EDWARDS,C.BOUNTRA,O.GILEADI REVDAT 1 16-OCT-24 7HI8 0 JRNL AUTH J.A.NEWMAN,A.E.GAVARD,L.SHERESTHA,N.A.BURGESS-BROWN, JRNL AUTH 2 F.VON DELFT,C.H.ARROWSMITH,A.EDWARDS,C.BOUNTRA,O.GILEADI JRNL TITL PANDDA ANALYSIS GROUP DEPOSITION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 30834 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1536 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.54 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2603 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.3490 REMARK 3 BIN FREE R VALUE SET COUNT : 143 REMARK 3 BIN FREE R VALUE : 0.3904 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1376 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.187 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.183 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.152 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.751 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7HI8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1001407506. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.91587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30834 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 52.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : 2.00000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 6F58 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CDCL, 0.1 M ACETATE PH 4.5, 32% REMARK 280 PEG 400, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.17546 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.58773 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 82.76319 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 55.17546 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 82.76319 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 27.58773 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 40 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 43 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 456 O HOH A 470 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 83 NZ LYS A 151 8655 1.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 186 CB CYS A 186 SG -0.107 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 59 103.45 67.66 REMARK 500 GLN A 118 -78.01 -112.33 REMARK 500 PHE A 143 57.54 -91.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 474 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A 475 DISTANCE = 6.92 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 304 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 100 NE2 REMARK 620 2 HOH A 462 O 111.9 REMARK 620 3 HOH A 463 O 99.1 112.0 REMARK 620 4 HOH A 466 O 105.2 106.0 122.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 301 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 167 OE1 REMARK 620 2 GLU A 167 OE1 0.0 REMARK 620 3 CYS A 186 SG 94.3 94.3 REMARK 620 4 CYS A 186 SG 87.3 87.3 41.9 REMARK 620 5 CYS A 186 SG 94.3 94.3 0.0 41.9 REMARK 620 6 CYS A 186 SG 87.3 87.3 41.9 0.0 41.9 REMARK 620 7 HOH A 460 O 91.6 91.6 114.7 156.3 114.7 156.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 302 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 167 OE1 REMARK 620 2 GLU A 167 OE2 51.6 REMARK 620 3 CYS A 186 SG 34.8 73.2 REMARK 620 4 CYS A 186 SG 49.9 74.4 18.8 REMARK 620 5 HOH A 447 O 143.7 101.1 123.5 104.7 REMARK 620 6 HOH A 461 O 104.2 105.4 129.5 148.1 106.5 REMARK 620 N 1 2 3 4 5 DBREF 7HI8 A 41 212 UNP O15178 TBXT_HUMAN 41 212 SEQADV 7HI8 GLY A 40 UNP O15178 EXPRESSION TAG SEQRES 1 A 173 GLY GLU LEU ARG VAL GLY LEU GLU GLU SER GLU LEU TRP SEQRES 2 A 173 LEU ARG PHE LYS GLU LEU THR ASN GLU MET ILE VAL THR SEQRES 3 A 173 LYS ASN GLY ARG ARG MET PHE PRO VAL LEU LYS VAL ASN SEQRES 4 A 173 VAL SER GLY LEU ASP PRO ASN ALA MET TYR SER PHE LEU SEQRES 5 A 173 LEU ASP PHE VAL ALA ALA ASP ASN HIS ARG TRP LYS TYR SEQRES 6 A 173 VAL ASN GLY GLU TRP VAL PRO GLY GLY LYS PRO GLU PRO SEQRES 7 A 173 GLN ALA PRO SER CYS VAL TYR ILE HIS PRO ASP SER PRO SEQRES 8 A 173 ASN PHE GLY ALA HIS TRP MET LYS ALA PRO VAL SER PHE SEQRES 9 A 173 SER LYS VAL LYS LEU THR ASN LYS LEU ASN GLY GLY GLY SEQRES 10 A 173 GLN ILE MET LEU ASN SER LEU HIS LYS TYR GLU PRO ARG SEQRES 11 A 173 ILE HIS ILE VAL ARG VAL GLY GLY PRO GLN ARG MET ILE SEQRES 12 A 173 THR SER HIS CYS PHE PRO GLU THR GLN PHE ILE ALA VAL SEQRES 13 A 173 THR ALA TYR GLN ASN GLU GLU ILE THR ALA LEU LYS ILE SEQRES 14 A 173 LYS TYR ASN PRO HET CD A 301 1 HET CD A 302 1 HET CD A 303 1 HET CD A 304 1 HET CD A 305 1 HETNAM CD CADMIUM ION FORMUL 2 CD 5(CD 2+) FORMUL 7 HOH *75(H2 O) HELIX 1 AA1 GLU A 48 LEU A 58 1 11 HELIX 2 AA2 GLY A 133 LYS A 138 1 6 HELIX 3 AA3 PRO A 188 GLN A 191 5 4 HELIX 4 AA4 ASN A 200 ASN A 211 1 12 SHEET 1 AA1 3 ARG A 43 LEU A 46 0 SHEET 2 AA1 3 LYS A 76 SER A 80 -1 O ASN A 78 N GLY A 45 SHEET 3 AA1 3 VAL A 141 SER A 142 -1 O VAL A 141 N VAL A 77 SHEET 1 AA2 5 GLU A 61 ILE A 63 0 SHEET 2 AA2 5 PHE A 192 VAL A 195 1 O VAL A 195 N MET A 62 SHEET 3 AA2 5 LYS A 165 VAL A 175 -1 N TYR A 166 O PHE A 192 SHEET 4 AA2 5 MET A 87 ALA A 96 -1 N ASP A 93 O ARG A 169 SHEET 5 AA2 5 ASN A 131 PHE A 132 -1 O ASN A 131 N TYR A 88 SHEET 1 AA3 4 TYR A 124 ILE A 125 0 SHEET 2 AA3 4 MET A 87 ALA A 96 -1 N LEU A 92 O TYR A 124 SHEET 3 AA3 4 LYS A 165 VAL A 175 -1 O ARG A 169 N ASP A 93 SHEET 4 AA3 4 MET A 181 CYS A 186 -1 O THR A 183 N ILE A 172 SHEET 1 AA4 3 ARG A 69 ARG A 70 0 SHEET 2 AA4 3 LYS A 147 THR A 149 -1 O LEU A 148 N ARG A 69 SHEET 3 AA4 3 ILE A 158 MET A 159 1 O ILE A 158 N LYS A 147 SHEET 1 AA5 2 TRP A 102 VAL A 105 0 SHEET 2 AA5 2 GLU A 108 PRO A 111 -1 O GLU A 108 N VAL A 105 LINK NE2 HIS A 100 CD CD A 304 1555 1555 2.44 LINK SG CYS A 122 CD CD A 303 1555 1555 2.92 LINK SG CYS A 122 CD CD A 305 1555 1555 3.07 LINK OE1 GLU A 167 CD CD A 301 1555 1555 2.55 LINK OE1 GLU A 167 CD CD A 301 1555 5655 1.98 LINK OE1 GLU A 167 CD CD A 302 1555 1555 2.68 LINK OE2 GLU A 167 CD CD A 302 1555 1555 2.29 LINK SG ACYS A 186 CD CD A 301 1555 1555 2.74 LINK SG BCYS A 186 CD CD A 301 1555 1555 2.78 LINK SG ACYS A 186 CD CD A 301 1555 5655 2.76 LINK SG BCYS A 186 CD CD A 301 1555 5655 2.77 LINK SG ACYS A 186 CD CD A 302 1555 5655 2.05 LINK SG BCYS A 186 CD CD A 302 1555 5655 2.10 LINK CD CD A 301 O HOH A 460 1555 5655 2.66 LINK CD CD A 302 O HOH A 447 1555 5655 2.64 LINK CD CD A 302 O HOH A 461 1555 5655 2.49 LINK CD CD A 304 O HOH A 462 1555 1555 2.51 LINK CD CD A 304 O HOH A 463 1555 1555 2.43 LINK CD CD A 304 O HOH A 466 1555 5655 2.55 CISPEP 1 PHE A 72 PRO A 73 0 -6.92 CISPEP 2 ALA A 119 PRO A 120 0 0.94 CISPEP 3 SER A 129 PRO A 130 0 -11.13 CRYST1 60.318 60.318 110.014 90.00 90.00 90.00 P 41 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016739 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016739 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009062 0.00000 TER 1383 PRO A 212 HETATM 1384 CD CD A 301 30.160 -3.118 0.001 0.50 21.29 CD HETATM 1385 CD CD A 302 28.113 -4.605 -2.632 1.00 22.64 CD HETATM 1386 CD CD A 303 22.050 12.805 10.742 1.00 83.23 CD HETATM 1387 CD CD A 304 27.191 5.166 -13.479 1.00 31.34 CD HETATM 1388 CD CD A 305 25.930 12.627 10.664 1.00 77.96 CD HETATM 1389 O HOH A 401 34.246 -6.303 5.412 1.00 32.28 O HETATM 1390 O HOH A 402 37.943 -7.871 19.309 1.00 37.93 O HETATM 1391 O HOH A 403 23.324 -0.803 -8.073 1.00 23.55 O HETATM 1392 O HOH A 404 19.658 -6.804 23.557 1.00 34.88 O HETATM 1393 O HOH A 405 30.847 6.578 -7.079 1.00 35.13 O HETATM 1394 O HOH A 406 23.727 -7.957 28.579 1.00 34.24 O HETATM 1395 O HOH A 407 18.348 -10.368 9.094 1.00 27.49 O HETATM 1396 O HOH A 408 10.711 -3.929 -6.475 1.00 27.19 O HETATM 1397 O HOH A 409 26.090 -6.372 29.381 1.00 39.77 O HETATM 1398 O HOH A 410 17.314 3.503 18.605 1.00 30.01 O HETATM 1399 O HOH A 411 16.827 5.900 13.699 1.00 33.73 O HETATM 1400 O HOH A 412 21.270 4.725 -6.404 1.00 27.37 O HETATM 1401 O HOH A 413 27.337 -15.720 18.865 1.00 39.02 O HETATM 1402 O HOH A 414 37.692 -2.317 9.255 1.00 34.18 O HETATM 1403 O HOH A 415 15.554 -10.431 9.813 1.00 34.53 O HETATM 1404 O HOH A 416 11.789 1.640 6.074 1.00 28.91 O HETATM 1405 O HOH A 417 6.568 12.123 5.061 1.00 51.35 O HETATM 1406 O HOH A 418 17.708 -3.945 22.498 1.00 29.08 O HETATM 1407 O HOH A 419 14.236 -0.756 11.710 1.00 24.11 O HETATM 1408 O HOH A 420 25.199 -0.361 27.656 0.50 27.50 O HETATM 1409 O HOH A 421 4.915 -11.440 -3.655 1.00 32.14 O HETATM 1410 O HOH A 422 25.592 -12.390 17.696 1.00 35.40 O HETATM 1411 O HOH A 423 2.202 -15.808 6.322 1.00 28.80 O HETATM 1412 O HOH A 424 36.359 -4.452 15.568 1.00 35.12 O HETATM 1413 O HOH A 425 17.128 -5.604 -3.677 1.00 25.00 O HETATM 1414 O HOH A 426 17.111 -7.117 -0.087 1.00 23.11 O HETATM 1415 O HOH A 427 29.941 -8.844 2.057 1.00 36.35 O HETATM 1416 O HOH A 428 17.859 -0.938 16.552 1.00 24.56 O HETATM 1417 O HOH A 429 12.870 -4.423 -11.422 1.00 40.54 O HETATM 1418 O HOH A 430 19.506 -6.944 19.306 1.00 29.07 O HETATM 1419 O HOH A 431 22.010 -6.671 20.569 1.00 30.20 O HETATM 1420 O HOH A 432 36.784 -4.563 8.288 1.00 30.40 O HETATM 1421 O HOH A 433 17.018 -3.044 10.314 1.00 24.46 O HETATM 1422 O HOH A 434 3.300 1.813 -0.074 1.00 34.16 O HETATM 1423 O HOH A 435 27.612 4.472 -9.861 1.00 29.35 O HETATM 1424 O HOH A 436 31.946 -0.782 2.506 1.00 26.43 O HETATM 1425 O HOH A 437 20.725 -16.841 7.565 1.00 41.33 O HETATM 1426 O HOH A 438 21.930 10.297 6.786 1.00 39.99 O HETATM 1427 O HOH A 439 22.890 -9.370 21.159 1.00 32.54 O HETATM 1428 O HOH A 440 12.665 -9.060 10.340 1.00 32.83 O HETATM 1429 O HOH A 441 3.596 5.170 1.688 1.00 38.78 O HETATM 1430 O HOH A 442 18.407 -18.432 5.995 1.00 33.41 O HETATM 1431 O HOH A 443 14.802 12.092 -0.967 1.00 44.03 O HETATM 1432 O HOH A 444 9.076 6.988 -4.360 1.00 36.12 O HETATM 1433 O HOH A 445 23.423 1.459 26.356 1.00 32.20 O HETATM 1434 O HOH A 446 3.331 -3.671 -9.329 1.00 36.84 O HETATM 1435 O HOH A 447 31.690 -7.041 3.656 1.00 16.96 O HETATM 1436 O HOH A 448 21.205 10.534 12.656 1.00 54.87 O HETATM 1437 O HOH A 449 20.408 11.632 8.900 1.00 43.19 O HETATM 1438 O HOH A 450 8.028 2.959 11.912 1.00 33.20 O HETATM 1439 O HOH A 451 23.094 -11.288 -2.758 1.00 40.58 O HETATM 1440 O HOH A 452 26.683 10.124 11.699 1.00 36.37 O HETATM 1441 O HOH A 453 6.407 3.736 16.273 1.00 47.98 O HETATM 1442 O HOH A 454 20.575 8.782 -12.848 1.00 33.62 O HETATM 1443 O HOH A 455 32.849 -12.424 8.362 1.00 41.18 O HETATM 1444 O HOH A 456 10.073 2.090 20.311 1.00 35.99 O HETATM 1445 O HOH A 457 3.335 -3.732 2.488 1.00 35.98 O HETATM 1446 O HOH A 458 17.183 -2.493 18.800 1.00 28.75 O HETATM 1447 O HOH A 459 17.751 -4.943 19.906 1.00 28.07 O HETATM 1448 O HOH A 460 29.442 -0.588 0.803 0.50 16.87 O HETATM 1449 O HOH A 461 32.201 -3.041 4.486 1.00 19.06 O HETATM 1450 O HOH A 462 28.803 6.573 -12.169 1.00 29.28 O HETATM 1451 O HOH A 463 27.462 5.461 -15.873 1.00 23.63 O HETATM 1452 O HOH A 464 3.844 -12.891 -1.471 1.00 34.41 O HETATM 1453 O HOH A 465 27.358 -8.708 29.077 1.00 41.36 O HETATM 1454 O HOH A 466 32.525 2.864 12.380 1.00 23.52 O HETATM 1455 O HOH A 467 3.614 -13.355 -7.460 1.00 33.07 O HETATM 1456 O HOH A 468 -0.350 -12.794 4.352 1.00 28.84 O HETATM 1457 O HOH A 469 31.475 5.167 19.553 1.00 49.32 O HETATM 1458 O HOH A 470 11.223 2.676 22.008 1.00 34.52 O HETATM 1459 O HOH A 471 38.153 -6.090 17.210 1.00 30.55 O HETATM 1460 O HOH A 472 15.854 2.716 20.813 1.00 29.27 O HETATM 1461 O HOH A 473 1.561 -1.605 2.190 1.00 41.78 O HETATM 1462 O HOH A 474 24.034 13.792 12.828 1.00 56.41 O HETATM 1463 O HOH A 475 25.523 15.420 9.944 1.00 56.79 O CONECT 482 1387 CONECT 657 1386 1388 CONECT 1012 1384 1385 CONECT 1013 1385 CONECT 1167 1384 CONECT 1168 1384 CONECT 1384 1012 1167 1168 CONECT 1385 1012 1013 CONECT 1386 657 CONECT 1387 482 1450 1451 CONECT 1388 657 CONECT 1450 1387 CONECT 1451 1387 MASTER 385 0 5 4 17 0 0 6 1456 1 13 14 END