HEADER VIRAL PROTEIN 03-FEB-25 7I1D TITLE PANDDA ANALYSIS GROUP DEPOSITION -- MAIN PROTEASE (SARS-COV-2) IN TITLE 2 COMPLEX WITH FRAGMENT F04 FROM THE F2X-ENTRY SCREEN IN ORTHORHOMBIC TITLE 3 SPACE GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3C-LIKE PROTEINASE NSP5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3CL-PRO,3CLP,MAIN PROTEASE,MPRO,NON-STRUCTURAL PROTEIN 5, COMPND 5 NSP5,SARS CORONAVIRUS MAIN PROTEINASE; COMPND 6 EC: 3.4.22.69; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: REP, 1A-1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS SARS-COV-2, FRAGMENT SCREEN, MAIN PROTEASE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.BARTHEL,L.S.BENZ,J.WOLLENHAUPT,M.S.WEISS REVDAT 1 21-MAY-25 7I1D 0 JRNL AUTH T.BARTHEL,J.WOLLENHAUPT,L.S.BENZ,P.REINCKE,L.ZHANG, JRNL AUTH 2 F.LENNARTZ,H.TABERMANN,U.MUELLER,A.MEENTE,R.HILGENFELD, JRNL AUTH 3 M.S.WEISS JRNL TITL ORTHORHOMBIC SARS-COV-2 MAIN PROTEASE CRYSTALS PROVIDE JRNL TITL 2 HIGHER SUCCESS RATE IN FRAGMENT SCREENING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 45996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 2100 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3329 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.3490 REMARK 3 BIN FREE R VALUE SET COUNT : 152 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4652 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 61 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.64000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : 0.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.239 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.196 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.191 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.494 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6930 ; 0.007 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 5928 ; 0.002 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8415 ; 1.513 ; 1.641 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12388 ; 1.323 ; 1.574 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 849 ;17.775 ; 5.212 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 291 ;36.028 ;23.265 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 924 ;15.199 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;16.946 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 779 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7890 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1325 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3564 ; 2.374 ; 3.427 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3559 ; 2.375 ; 3.428 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4024 ; 3.946 ; 5.128 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4025 ; 3.946 ; 5.129 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3366 ; 2.953 ; 3.717 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3366 ; 2.951 ; 3.717 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4392 ; 4.825 ; 5.489 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6149 ; 7.046 ;38.302 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6146 ; 7.046 ;38.309 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7I1D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-25. REMARK 100 THE DEPOSITION ID IS D_1001408192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48096 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 46.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.16800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.61000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MIB (SODIUM MALONATE, IMIDAZOLE, REMARK 280 AND BORIC ACID IN THE MOLAR RATIOS 2:3:3) PH 7.7, 23.5 % PEG REMARK 280 1500, 5 % DMSO, 1 MM DTT. CRYSTAL SEEDS WERE USED TO ENSURE REMARK 280 REPRODUCIBLE CRYSTAL GROWTH., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.98000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.96500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.73500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.96500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.98000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.73500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 301 REMARK 465 GLY A 302 REMARK 465 VAL A 303 REMARK 465 THR A 304 REMARK 465 PHE A 305 REMARK 465 GLN A 306 REMARK 465 GLY B 302 REMARK 465 VAL B 303 REMARK 465 THR B 304 REMARK 465 PHE B 305 REMARK 465 GLN B 306 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 33 -128.17 53.49 REMARK 500 ASN A 84 -126.75 57.06 REMARK 500 ASP A 155 -6.99 79.03 REMARK 500 ASP A 176 -179.59 -69.99 REMARK 500 LEU A 282 42.05 37.25 REMARK 500 LEU B 27 -169.86 -162.91 REMARK 500 LEU B 27 -169.86 -162.91 REMARK 500 ASP B 33 -127.15 42.32 REMARK 500 ASN B 51 78.22 -151.51 REMARK 500 ASN B 84 -124.74 53.85 REMARK 500 ASN B 119 78.27 8.65 REMARK 500 ASN B 119 78.27 8.65 REMARK 500 SER B 123 -31.11 -133.32 REMARK 500 SER B 123 -31.11 -133.32 REMARK 500 SER B 139 83.38 127.63 REMARK 500 SER B 139 83.38 127.63 REMARK 500 TYR B 154 -105.43 71.01 REMARK 500 ARG B 279 175.90 -49.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 221 O REMARK 620 2 ASN B 221 OD1 79.1 REMARK 620 3 PHE B 223 O 107.8 100.1 REMARK 620 4 ASP B 263 O 158.5 113.3 87.9 REMARK 620 5 ASP B 263 OD1 92.9 171.9 82.9 74.1 REMARK 620 N 1 2 3 4 DBREF 7I1D A 1 306 UNP P0DTD1 R1AB_SARS2 3264 3569 DBREF 7I1D B 1 306 UNP P0DTD1 R1AB_SARS2 3264 3569 SEQRES 1 A 306 SER GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 A 306 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 A 306 LEU ASN GLY LEU TRP LEU ASP ASP VAL VAL TYR CYS PRO SEQRES 4 A 306 ARG HIS VAL ILE CYS THR SER GLU ASP MET LEU ASN PRO SEQRES 5 A 306 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS ASN SEQRES 6 A 306 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 A 306 GLY HIS SER MET GLN ASN CYS VAL LEU LYS LEU LYS VAL SEQRES 8 A 306 ASP THR ALA ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 A 306 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 A 306 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 A 306 ARG PRO ASN PHE THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 A 306 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 A 306 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 A 306 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY ASN PHE TYR SEQRES 15 A 306 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 A 306 THR ASP THR THR ILE THR VAL ASN VAL LEU ALA TRP LEU SEQRES 17 A 306 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 A 306 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 A 306 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 A 306 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 A 306 VAL LEU ASP MET CYS ALA SER LEU LYS GLU LEU LEU GLN SEQRES 22 A 306 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER ALA LEU SEQRES 23 A 306 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 A 306 CYS SER GLY VAL THR PHE GLN SEQRES 1 B 306 SER GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 B 306 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 B 306 LEU ASN GLY LEU TRP LEU ASP ASP VAL VAL TYR CYS PRO SEQRES 4 B 306 ARG HIS VAL ILE CYS THR SER GLU ASP MET LEU ASN PRO SEQRES 5 B 306 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS ASN SEQRES 6 B 306 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 B 306 GLY HIS SER MET GLN ASN CYS VAL LEU LYS LEU LYS VAL SEQRES 8 B 306 ASP THR ALA ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 B 306 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 B 306 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 B 306 ARG PRO ASN PHE THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 B 306 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 B 306 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 B 306 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY ASN PHE TYR SEQRES 15 B 306 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 B 306 THR ASP THR THR ILE THR VAL ASN VAL LEU ALA TRP LEU SEQRES 17 B 306 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 B 306 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 B 306 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 B 306 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 B 306 VAL LEU ASP MET CYS ALA SER LEU LYS GLU LEU LEU GLN SEQRES 22 B 306 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER ALA LEU SEQRES 23 B 306 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 B 306 CYS SER GLY VAL THR PHE GLN HET CL A 401 1 HET RB7 A 402 32 HET DMS A 403 4 HET NA B 401 1 HETNAM CL CHLORIDE ION HETNAM RB7 N-[(4-BROMO-3-METHYLPHENYL)METHYL]-2-(METHYLSULFONYL) HETNAM 2 RB7 ETHAN-1-AMINE HETNAM DMS DIMETHYL SULFOXIDE HETNAM NA SODIUM ION FORMUL 3 CL CL 1- FORMUL 4 RB7 C11 H16 BR N O2 S FORMUL 5 DMS C2 H6 O S FORMUL 6 NA NA 1+ FORMUL 7 HOH *61(H2 O) HELIX 1 AA1 SER A 10 GLY A 15 1 6 HELIX 2 AA2 HIS A 41 CYS A 44 5 4 HELIX 3 AA3 ASN A 53 ARG A 60 1 8 HELIX 4 AA4 SER A 62 PHE A 66 5 5 HELIX 5 AA5 ILE A 200 ASN A 214 1 15 HELIX 6 AA6 THR A 226 LYS A 236 1 11 HELIX 7 AA7 THR A 243 GLY A 258 1 16 HELIX 8 AA8 ALA A 260 GLY A 275 1 16 HELIX 9 AA9 THR A 292 CYS A 300 1 9 HELIX 10 AB1 SER B 10 GLY B 15 1 6 HELIX 11 AB2 HIS B 41 CYS B 44 5 4 HELIX 12 AB3 GLU B 47 ASN B 51 5 5 HELIX 13 AB4 ASN B 53 ARG B 60 1 8 HELIX 14 AB5 SER B 62 PHE B 66 5 5 HELIX 15 AB6 ILE B 200 ASN B 214 1 15 HELIX 16 AB7 THR B 226 TYR B 237 1 12 HELIX 17 AB8 THR B 243 LEU B 250 1 8 HELIX 18 AB9 LEU B 250 GLY B 258 1 9 HELIX 19 AC1 ALA B 260 GLY B 275 1 16 HELIX 20 AC2 THR B 292 SER B 301 1 10 SHEET 1 AA1 7 VAL A 73 LEU A 75 0 SHEET 2 AA1 7 LEU A 67 ALA A 70 -1 N VAL A 68 O LEU A 75 SHEET 3 AA1 7 MET A 17 CYS A 22 -1 N GLN A 19 O GLN A 69 SHEET 4 AA1 7 THR A 25 LEU A 32 -1 O LEU A 27 N VAL A 20 SHEET 5 AA1 7 VAL A 35 PRO A 39 -1 O VAL A 35 N LEU A 32 SHEET 6 AA1 7 VAL A 86 VAL A 91 -1 O LEU A 87 N CYS A 38 SHEET 7 AA1 7 VAL A 77 GLN A 83 -1 N GLN A 83 O VAL A 86 SHEET 1 AA2 5 TYR A 101 PHE A 103 0 SHEET 2 AA2 5 CYS A 156 GLU A 166 1 O PHE A 159 N LYS A 102 SHEET 3 AA2 5 VAL A 148 ASP A 153 -1 N ASN A 151 O SER A 158 SHEET 4 AA2 5 THR A 111 TYR A 118 -1 N SER A 113 O PHE A 150 SHEET 5 AA2 5 SER A 121 ALA A 129 -1 O SER A 123 N ALA A 116 SHEET 1 AA3 3 TYR A 101 PHE A 103 0 SHEET 2 AA3 3 CYS A 156 GLU A 166 1 O PHE A 159 N LYS A 102 SHEET 3 AA3 3 HIS A 172 THR A 175 -1 O ALA A 173 N MET A 165 SHEET 1 AA4 7 VAL B 73 LEU B 75 0 SHEET 2 AA4 7 LEU B 67 ALA B 70 -1 N VAL B 68 O LEU B 75 SHEET 3 AA4 7 MET B 17 CYS B 22 -1 N GLN B 19 O GLN B 69 SHEET 4 AA4 7 THR B 25 LEU B 32 -1 O LEU B 27 N VAL B 20 SHEET 5 AA4 7 VAL B 35 PRO B 39 -1 O TYR B 37 N LEU B 30 SHEET 6 AA4 7 VAL B 86 VAL B 91 -1 O LEU B 89 N VAL B 36 SHEET 7 AA4 7 VAL B 77 GLN B 83 -1 N SER B 81 O LYS B 88 SHEET 1 AA5 5 TYR B 101 PHE B 103 0 SHEET 2 AA5 5 CYS B 156 GLU B 166 1 O PHE B 159 N LYS B 102 SHEET 3 AA5 5 VAL B 148 ASP B 153 -1 N ASN B 151 O SER B 158 SHEET 4 AA5 5 THR B 111 TYR B 118 -1 N SER B 113 O PHE B 150 SHEET 5 AA5 5 SER B 121 ALA B 129 -1 O SER B 123 N ALA B 116 SHEET 1 AA6 3 TYR B 101 PHE B 103 0 SHEET 2 AA6 3 CYS B 156 GLU B 166 1 O PHE B 159 N LYS B 102 SHEET 3 AA6 3 HIS B 172 THR B 175 -1 O ALA B 173 N MET B 165 SSBOND 1 CYS B 117 CYS B 145 1555 1555 2.03 LINK O ASN B 221 NA NA B 401 1555 1555 2.66 LINK OD1 ASN B 221 NA NA B 401 1555 1555 2.36 LINK O PHE B 223 NA NA B 401 1555 1555 2.40 LINK O ASP B 263 NA NA B 401 1555 1555 2.92 LINK OD1 ASP B 263 NA NA B 401 1555 1555 2.23 CRYST1 67.960 99.470 103.930 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014715 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010053 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009622 0.00000 TER 2875 CYS A 300 TER 5859 SER B 301 HETATM 5860 CL CL A 401 5.282 -15.202 -31.038 1.00 35.98 CL HETATM 5861 C4 CRB7 A 402 24.950 3.760 -28.732 0.30 42.88 C HETATM 5862 C4 DRB7 A 402 24.950 3.760 -28.731 0.30 42.88 C HETATM 5863 C5 CRB7 A 402 23.948 3.159 -29.536 0.30 40.56 C HETATM 5864 C5 DRB7 A 402 23.948 3.159 -29.536 0.30 40.56 C HETATM 5865 C6 CRB7 A 402 24.325 2.634 -30.791 0.30 40.41 C HETATM 5866 C6 DRB7 A 402 24.325 2.634 -30.791 0.30 40.41 C HETATM 5867 C7 CRB7 A 402 27.444 4.523 -28.304 0.30 48.47 C HETATM 5868 C7 DRB7 A 402 27.444 4.523 -28.304 0.30 48.47 C HETATM 5869 C8 CRB7 A 402 26.224 6.292 -26.825 0.30 59.33 C HETATM 5870 C8 DRB7 A 402 26.224 6.292 -26.825 0.30 59.33 C HETATM 5871 C9 CRB7 A 402 26.979 7.472 -26.110 0.30 62.64 C HETATM 5872 C9 DRB7 A 402 26.979 7.472 -26.110 0.30 62.64 C HETATM 5873 C10CRB7 A 402 29.897 7.976 -26.096 0.30 65.51 C HETATM 5874 C10DRB7 A 402 29.897 7.976 -26.096 0.30 65.51 C HETATM 5875 O1 CRB7 A 402 28.836 5.570 -25.696 0.30 69.09 O HETATM 5876 O1 DRB7 A 402 28.836 5.570 -25.696 0.30 69.09 O HETATM 5877 S CRB7 A 402 28.594 6.960 -25.415 0.30 68.82 S HETATM 5878 S DRB7 A 402 28.594 6.960 -25.415 0.30 68.82 S HETATM 5879 O CRB7 A 402 28.564 7.041 -23.975 0.30 70.42 O HETATM 5880 O DRB7 A 402 28.564 7.041 -23.975 0.30 70.42 O HETATM 5881 N CRB7 A 402 27.005 4.957 -26.900 0.30 54.67 N HETATM 5882 N DRB7 A 402 27.005 4.957 -26.900 0.30 54.67 N HETATM 5883 C3 CRB7 A 402 26.314 3.850 -29.186 0.30 44.93 C HETATM 5884 C3 DRB7 A 402 26.314 3.850 -29.186 0.30 44.93 C HETATM 5885 C2 CRB7 A 402 26.627 3.302 -30.473 0.30 41.85 C HETATM 5886 C2 DRB7 A 402 26.627 3.302 -30.473 0.30 41.85 C HETATM 5887 BR CRB7 A 402 22.924 1.803 -31.855 0.30 42.66 BR HETATM 5888 BR DRB7 A 402 22.924 1.803 -31.855 0.30 42.66 BR HETATM 5889 C1 CRB7 A 402 25.653 2.690 -31.292 0.30 37.48 C HETATM 5890 C1 DRB7 A 402 25.653 2.690 -31.292 0.30 37.48 C HETATM 5891 C CRB7 A 402 26.033 2.138 -32.601 0.30 34.35 C HETATM 5892 C DRB7 A 402 26.033 2.138 -32.601 0.30 34.35 C HETATM 5893 S DMS A 403 -0.632 -11.569 -18.191 1.00 44.04 S HETATM 5894 O DMS A 403 0.263 -11.185 -19.384 1.00 44.33 O HETATM 5895 C1 DMS A 403 0.375 -11.353 -16.732 1.00 37.90 C HETATM 5896 C2 DMS A 403 -0.642 -13.335 -18.149 1.00 42.71 C HETATM 5897 NA NA B 401 -2.389 27.872 -22.152 1.00 44.26 NA HETATM 5898 O HOH A 501 -3.632 -2.156 -26.280 1.00 35.97 O HETATM 5899 O HOH A 502 23.396 -18.199 -20.164 1.00 44.16 O HETATM 5900 O HOH A 503 -1.408 -11.549 -31.653 1.00 25.39 O HETATM 5901 O HOH A 504 -15.734 -11.797 -50.609 1.00 29.81 O HETATM 5902 O HOH A 505 -17.838 -5.048 -46.865 1.00 27.81 O HETATM 5903 O HOH A 506 26.095 -2.430 -37.007 1.00 28.89 O HETATM 5904 O HOH A 507 -1.074 -15.104 -40.086 1.00 31.86 O HETATM 5905 O HOH A 508 -8.624 1.680 -34.682 1.00 30.06 O HETATM 5906 O HOH A 509 28.586 -1.259 -38.171 1.00 35.75 O HETATM 5907 O HOH A 510 -18.865 -9.520 -47.254 1.00 27.35 O HETATM 5908 O HOH A 511 4.537 -1.788 -28.230 1.00 17.57 O HETATM 5909 O HOH A 512 -21.059 0.058 -44.087 1.00 32.92 O HETATM 5910 O HOH A 513 -15.647 0.457 -42.167 1.00 32.45 O HETATM 5911 O HOH A 514 8.789 -13.227 -11.409 1.00 21.92 O HETATM 5912 O HOH A 515 -0.946 -8.055 -22.913 1.00 28.21 O HETATM 5913 O HOH A 516 15.434 -5.840 -17.603 1.00 26.49 O HETATM 5914 O HOH A 517 16.036 -14.238 -10.426 1.00 30.38 O HETATM 5915 O HOH A 518 22.503 -16.064 -27.028 1.00 32.07 O HETATM 5916 O HOH A 519 -6.066 -6.247 -27.990 1.00 23.29 O HETATM 5917 O HOH A 520 0.589 0.783 -28.673 1.00 40.27 O HETATM 5918 O HOH A 521 29.494 0.425 -42.172 1.00 27.78 O HETATM 5919 O HOH A 522 -13.404 -14.206 -48.095 1.00 30.01 O HETATM 5920 O HOH A 523 13.421 -3.833 -33.090 1.00 28.01 O HETATM 5921 O HOH A 524 15.512 -14.520 -27.618 1.00 22.75 O HETATM 5922 O HOH A 525 -20.396 -4.462 -40.746 1.00 30.01 O HETATM 5923 O HOH A 526 2.340 -11.136 -22.595 1.00 29.75 O HETATM 5924 O AHOH A 527 18.991 5.398 -28.855 0.20 8.93 O HETATM 5925 O BHOH A 527 18.991 5.398 -28.855 0.20 8.93 O HETATM 5926 O CHOH A 527 19.083 5.213 -29.368 0.30 16.87 O HETATM 5927 O DHOH A 527 19.083 5.213 -29.368 0.30 16.87 O HETATM 5928 O HOH A 528 -3.940 -9.261 -37.388 1.00 19.67 O HETATM 5929 O HOH A 529 20.586 -8.307 -36.439 1.00 23.73 O HETATM 5930 O HOH A 530 24.385 -3.355 -29.977 1.00 22.90 O HETATM 5931 O HOH A 531 -1.815 -7.936 -20.334 1.00 26.09 O HETATM 5932 O HOH A 532 30.991 -4.817 -37.528 1.00 24.67 O HETATM 5933 O HOH A 533 32.353 -7.221 -37.136 1.00 35.72 O HETATM 5934 O HOH A 534 -8.138 -11.470 -47.706 1.00 29.96 O HETATM 5935 O HOH A 535 -19.877 -7.592 -45.517 1.00 27.73 O HETATM 5936 O HOH A 536 -24.619 -9.898 -43.373 1.00 32.31 O HETATM 5937 O HOH A 537 15.837 -16.391 -29.510 1.00 30.79 O HETATM 5938 O HOH A 538 -21.025 -10.852 -47.538 1.00 32.08 O HETATM 5939 O HOH B 501 -0.114 -9.787 -4.027 1.00 49.79 O HETATM 5940 O HOH B 502 7.097 -16.960 15.393 1.00 39.92 O HETATM 5941 O HOH B 503 -3.407 -22.970 2.100 1.00 36.78 O HETATM 5942 O HOH B 504 -11.786 0.151 -1.150 1.00 17.21 O HETATM 5943 O HOH B 505 1.100 5.520 -12.095 1.00 23.81 O HETATM 5944 O HOH B 506 -8.024 2.484 -10.154 1.00 23.05 O HETATM 5945 O HOH B 507 -2.877 11.022 -15.020 1.00 25.78 O HETATM 5946 O HOH B 508 2.967 8.669 -6.854 1.00 31.01 O HETATM 5947 O HOH B 509 -3.314 29.701 -28.352 1.00 32.01 O HETATM 5948 O HOH B 510 -12.302 -6.853 14.005 1.00 33.65 O HETATM 5949 O HOH B 511 2.995 4.581 -7.665 1.00 25.27 O HETATM 5950 O HOH B 512 10.890 -5.727 -6.020 1.00 23.81 O HETATM 5951 O HOH B 513 -8.592 5.953 -25.101 1.00 27.70 O HETATM 5952 O HOH B 514 -1.457 -0.245 5.263 1.00 21.70 O HETATM 5953 O HOH B 515 -12.193 13.712 -29.853 1.00 42.67 O HETATM 5954 O HOH B 516 -12.571 -9.638 5.153 1.00 20.03 O HETATM 5955 O HOH B 517 1.277 7.411 -4.880 1.00 34.13 O HETATM 5956 O HOH B 518 -16.375 -4.138 7.656 1.00 33.47 O HETATM 5957 O HOH B 519 3.026 4.540 -13.772 1.00 18.27 O HETATM 5958 O AHOH B 520 -10.780 -14.329 -3.416 0.25 19.75 O HETATM 5959 O BHOH B 520 -10.780 -14.329 -3.416 0.25 19.75 O HETATM 5960 O CHOH B 520 -9.852 -12.528 -2.312 0.25 34.17 O HETATM 5961 O DHOH B 520 -9.852 -12.528 -2.312 0.25 34.17 O HETATM 5962 O HOH B 521 5.222 6.407 -13.768 1.00 26.93 O HETATM 5963 O HOH B 522 -15.886 2.978 -9.242 1.00 33.43 O HETATM 5964 O HOH B 523 -7.166 17.126 -8.158 1.00 35.69 O CONECT 3933 4510 CONECT 3934 4511 CONECT 4510 3933 CONECT 4511 3934 CONECT 5235 5897 CONECT 5238 5897 CONECT 5254 5897 CONECT 5565 5897 CONECT 5568 5897 CONECT 5861 5863 5883 CONECT 5862 5864 5884 CONECT 5863 5861 5865 CONECT 5864 5862 5866 CONECT 5865 5863 5887 5889 CONECT 5866 5864 5888 5890 CONECT 5867 5881 5883 CONECT 5868 5882 5884 CONECT 5869 5871 5881 CONECT 5870 5872 5882 CONECT 5871 5869 5877 CONECT 5872 5870 5878 CONECT 5873 5877 CONECT 5874 5878 CONECT 5875 5877 CONECT 5876 5878 CONECT 5877 5871 5873 5875 5879 CONECT 5878 5872 5874 5876 5880 CONECT 5879 5877 CONECT 5880 5878 CONECT 5881 5867 5869 CONECT 5882 5868 5870 CONECT 5883 5861 5867 5885 CONECT 5884 5862 5868 5886 CONECT 5885 5883 5889 CONECT 5886 5884 5890 CONECT 5887 5865 CONECT 5888 5866 CONECT 5889 5865 5885 5891 CONECT 5890 5866 5886 5892 CONECT 5891 5889 CONECT 5892 5890 CONECT 5893 5894 5895 5896 CONECT 5894 5893 CONECT 5895 5893 CONECT 5896 5893 CONECT 5897 5235 5238 5254 5565 CONECT 5897 5568 MASTER 308 0 4 20 30 0 0 6 4735 2 47 48 END