HEADER TRANSPORT PROTEIN 17-JUL-20 7JFN TITLE CRYSTAL STRUCTURE OF LEUCINE-, ISOLEUCINE-, VALINE-, THREONINE-, AND TITLE 2 ALANINE-BINDING PROTEIN FROM BRUCELLA OVIS, CLOSED CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE BRANCHED CHAIN AMINO ACID ABC TRANSPORTER, COMPND 3 PERIPLASMIC AMINO ACID-BINDING PROTEIN; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA OVIS (STRAIN ATCC 25840 / 63/290 / SOURCE 3 NCTC 10512); SOURCE 4 ORGANISM_TAXID: 444178; SOURCE 5 STRAIN: ATCC 25840 / 63/290 / NCTC 10512; SOURCE 6 ATCC: 25840; SOURCE 7 GENE: BOV_A0021; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: BROVA.17370.A.B2 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 18-OCT-23 7JFN 1 REMARK REVDAT 1 29-JUL-20 7JFN 0 JRNL AUTH J.ABENDROTH,D.M.DRANOW,D.D.LORIMER,P.S.HORANYI,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF LEUCINE-, ISOLEUCINE-, VALINE-, JRNL TITL 2 THREONINE-, AND ALANINE-BINDING PROTEIN FROM BRUCELLA OVIS, JRNL TITL 3 CLOSED CONFORMATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 43046 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.520 REMARK 3 FREE R VALUE TEST SET COUNT : 1944 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.8200 - 4.1000 0.99 3222 132 0.1482 0.1721 REMARK 3 2 4.1000 - 3.2500 1.00 3075 138 0.1420 0.1709 REMARK 3 3 3.2500 - 2.8400 1.00 3011 175 0.1549 0.1820 REMARK 3 4 2.8400 - 2.5800 1.00 2995 138 0.1585 0.2301 REMARK 3 5 2.5800 - 2.4000 1.00 3023 117 0.1572 0.2215 REMARK 3 6 2.4000 - 2.2500 1.00 2985 153 0.1550 0.1874 REMARK 3 7 2.2500 - 2.1400 1.00 2987 133 0.1522 0.1945 REMARK 3 8 2.1400 - 2.0500 1.00 2962 142 0.1574 0.2083 REMARK 3 9 2.0500 - 1.9700 1.00 3004 138 0.1590 0.2342 REMARK 3 10 1.9700 - 1.9000 1.00 2940 147 0.1645 0.1864 REMARK 3 11 1.9000 - 1.8400 1.00 2971 144 0.1696 0.1961 REMARK 3 12 1.8400 - 1.7900 0.98 2863 152 0.1919 0.2461 REMARK 3 13 1.7900 - 1.7400 0.89 2623 120 0.2253 0.2636 REMARK 3 14 1.7400 - 1.7000 0.82 2441 115 0.2580 0.3241 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.195 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.837 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3065 REMARK 3 ANGLE : 0.909 4169 REMARK 3 CHIRALITY : 0.061 464 REMARK 3 PLANARITY : 0.006 554 REMARK 3 DIHEDRAL : 15.835 1119 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1418 13.5990 12.6447 REMARK 3 T TENSOR REMARK 3 T11: 0.1455 T22: 0.1537 REMARK 3 T33: 0.1591 T12: -0.0097 REMARK 3 T13: -0.0065 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.2574 L22: 1.6844 REMARK 3 L33: 2.0984 L12: 0.3334 REMARK 3 L13: -0.0284 L23: -0.4547 REMARK 3 S TENSOR REMARK 3 S11: -0.0337 S12: -0.0370 S13: 0.0754 REMARK 3 S21: 0.1424 S22: -0.0684 S23: -0.0169 REMARK 3 S31: -0.0518 S32: 0.0938 S33: 0.1008 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 210 THROUGH 345 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3772 -15.8014 15.5670 REMARK 3 T TENSOR REMARK 3 T11: 0.1894 T22: 0.1577 REMARK 3 T33: 0.1735 T12: 0.0005 REMARK 3 T13: 0.0282 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 2.1736 L22: 3.6368 REMARK 3 L33: 2.7618 L12: -1.1524 REMARK 3 L13: 0.7809 L23: -0.5321 REMARK 3 S TENSOR REMARK 3 S11: -0.0221 S12: -0.0109 S13: -0.2631 REMARK 3 S21: 0.1103 S22: -0.0240 S23: 0.1715 REMARK 3 S31: 0.1944 S32: 0.1868 S33: 0.0482 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 346 THROUGH 403 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5898 9.9909 3.2231 REMARK 3 T TENSOR REMARK 3 T11: 0.1444 T22: 0.1586 REMARK 3 T33: 0.1841 T12: -0.0076 REMARK 3 T13: -0.0556 T23: 0.0418 REMARK 3 L TENSOR REMARK 3 L11: 2.7598 L22: 2.7749 REMARK 3 L33: 3.9663 L12: 0.3179 REMARK 3 L13: 0.5190 L23: 1.0688 REMARK 3 S TENSOR REMARK 3 S11: 0.0161 S12: 0.2493 S13: -0.0232 REMARK 3 S21: -0.3725 S22: 0.0044 S23: 0.3059 REMARK 3 S31: -0.1227 S32: -0.0371 S33: -0.0426 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 404 THROUGH 470 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8812 -2.6953 9.8586 REMARK 3 T TENSOR REMARK 3 T11: 0.1348 T22: 0.2214 REMARK 3 T33: 0.2478 T12: -0.0142 REMARK 3 T13: -0.0078 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 2.2142 L22: 5.0401 REMARK 3 L33: 2.3997 L12: -1.3116 REMARK 3 L13: -0.2698 L23: 1.2165 REMARK 3 S TENSOR REMARK 3 S11: 0.0726 S12: 0.1489 S13: -0.1619 REMARK 3 S21: 0.0118 S22: -0.1705 S23: 0.5209 REMARK 3 S31: 0.0975 S32: -0.0815 S33: 0.1212 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JFN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000250732. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43048 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 5.665 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.94 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.570 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: OPEN FORM STRUCTURE, PDB ENTRY 4XFK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RIGAKUREAGENTS JCSG+ SCREEN, CONDITION REMARK 280 A12: 20% PEG 3350, 200MM POTASSIUM NITRATE: REMARK 280 BROVA.17370.A.B2.PS02137 AT 25MG/ML: OVER NIGHT SOAK WITH 10MM REMARK 280 THR (DID NOT SHOW IN ELECTRON DENSITY): TRAY: 257609A12, CRYO: REMARK 280 20%EG+SOAK, PUCK TDS8-10, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.38500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.37500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.69500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.37500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.38500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.69500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 73 REMARK 465 ALA A 74 REMARK 465 HIS A 75 REMARK 465 HIS A 76 REMARK 465 HIS A 77 REMARK 465 HIS A 78 REMARK 465 HIS A 79 REMARK 465 HIS A 80 REMARK 465 GLY A 471 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 GLU A 229 CG CD OE1 OE2 REMARK 470 LYS A 253 CG CD CE NZ REMARK 470 LYS A 269 CG CD CE NZ REMARK 470 LYS A 310 CG CD CE NZ REMARK 470 LYS A 386 CG CD CE NZ REMARK 470 GLU A 389 CG CD OE1 OE2 REMARK 470 LYS A 391 CG CD CE NZ REMARK 470 GLU A 463 CG CD OE1 OE2 REMARK 470 LYS A 468 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 605 O HOH A 666 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 719 O HOH A 727 4555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 199 CA - CB - SG ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 208 171.50 -59.69 REMARK 500 SER A 294 -133.56 54.41 REMARK 500 ASN A 345 50.49 -143.49 REMARK 500 TYR A 366 -107.60 57.85 REMARK 500 GLU A 389 17.82 59.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-BROVA.17370.A RELATED DB: TARGETTRACK DBREF1 7JFN A 81 471 UNP A0A0H3ATZ3_BRUO2 DBREF2 7JFN A A0A0H3ATZ3 81 471 SEQADV 7JFN MET A 73 UNP A0A0H3ATZ INITIATING METHIONINE SEQADV 7JFN ALA A 74 UNP A0A0H3ATZ EXPRESSION TAG SEQADV 7JFN HIS A 75 UNP A0A0H3ATZ EXPRESSION TAG SEQADV 7JFN HIS A 76 UNP A0A0H3ATZ EXPRESSION TAG SEQADV 7JFN HIS A 77 UNP A0A0H3ATZ EXPRESSION TAG SEQADV 7JFN HIS A 78 UNP A0A0H3ATZ EXPRESSION TAG SEQADV 7JFN HIS A 79 UNP A0A0H3ATZ EXPRESSION TAG SEQADV 7JFN HIS A 80 UNP A0A0H3ATZ EXPRESSION TAG SEQADV 7JFN ARG A 213 UNP A0A0H3ATZ HIS 213 CONFLICT SEQRES 1 A 399 MET ALA HIS HIS HIS HIS HIS HIS ALA GLU PRO LEU LYS SEQRES 2 A 399 ILE ALA LEU VAL GLU THR LEU SER GLY PRO GLN ALA SER SEQRES 3 A 399 THR GLY LEU LEU TYR ARG ALA ALA VAL LEU TYR GLN LEU SEQRES 4 A 399 GLY LYS ILE ASN GLU ALA GLY GLY PHE ASN GLY GLU LYS SEQRES 5 A 399 ILE GLN ILE LEU GLU TYR ASP ASN GLN GLY GLY PRO VAL SEQRES 6 A 399 GLY ALA ALA ASP ARG VAL LYS ALA ALA ILE ALA ASP GLY SEQRES 7 A 399 ALA GLN ILE ILE VAL GLN GLY SER SER SER ALA VAL ALA SEQRES 8 A 399 GLY GLN ILE THR GLU ASP VAL ARG LYS TYR ASN LEU ARG SEQRES 9 A 399 ASN LYS GLY LYS GLU VAL LEU TYR LEU ASN LEU GLY ALA SEQRES 10 A 399 GLU ALA LEU GLU LEU THR GLY SER LYS CYS HIS PHE TYR SEQRES 11 A 399 HIS PHE ARG PHE SER PRO ASN ALA ALA ILE ARG PHE LYS SEQRES 12 A 399 THR VAL ALA GLN GLY MET LYS ASP LYS GLY ILE LEU GLY SEQRES 13 A 399 GLU ARG ALA TYR SER ILE ASN GLN ASN TYR SER TRP GLY SEQRES 14 A 399 VAL ASP VAL GLU ASN THR VAL VAL ALA ASN ALA LYS GLU SEQRES 15 A 399 ILE GLY TYR GLU VAL VAL ASP LYS THR LEU HIS GLU VAL SEQRES 16 A 399 ASN LYS ILE GLN ASP PHE SER PRO TYR VAL ALA LYS ILE SEQRES 17 A 399 GLN ALA ALA ASN VAL ASP THR VAL PHE THR GLY ASN TRP SEQRES 18 A 399 SER ASN ASP LEU LEU LEU LEU MET LYS ALA ALA SER GLY SEQRES 19 A 399 ALA GLY LEU LYS ALA LYS PHE ALA THR SER PHE LEU ASP SEQRES 20 A 399 GLN PRO GLY ASN ILE GLY ASN ALA GLY ALA ILE ALA GLU SEQRES 21 A 399 GLY HIS ILE VAL SER THR PRO PHE ASN PRO GLU ALA ASN SEQRES 22 A 399 GLY GLU ALA SER MET ALA PHE ALA GLU ASP TYR LYS LYS SEQRES 23 A 399 VAL THR GLY HIS TYR PRO SER TYR VAL GLU PRO ALA ALA SEQRES 24 A 399 VAL PHE GLY LEU GLN LEU PHE GLY GLU ALA LEU LYS ASN SEQRES 25 A 399 VAL LYS PRO GLY GLU GLY LYS ILE ASN THR THR ASP ILE SEQRES 26 A 399 ALA LEU ALA ILE GLU ASN ALA SER VAL LYS THR PRO MET SEQRES 27 A 399 GLY ASP TYR SER MET ARG SER ASP ASP HIS GLN ALA LYS SEQRES 28 A 399 PHE PRO MET VAL VAL GLN GLU VAL SER LYS LYS ALA ARG SEQRES 29 A 399 ILE LYS ALA ASP GLY THR GLU TYR GLY PHE LEU PRO PHE SEQRES 30 A 399 LYS THR PHE THR GLY ASP GLU SER ILE ASP PRO VAL GLN SEQRES 31 A 399 GLU SER CYS SER MET LYS ARG PRO GLY HET NO3 A 501 4 HET NO3 A 502 4 HET NO3 A 503 4 HET K A 504 1 HET EDO A 505 4 HETNAM NO3 NITRATE ION HETNAM K POTASSIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NO3 3(N O3 1-) FORMUL 5 K K 1+ FORMUL 6 EDO C2 H6 O2 FORMUL 7 HOH *288(H2 O) HELIX 1 AA1 ALA A 97 ALA A 117 1 21 HELIX 2 AA2 GLY A 134 ASP A 149 1 16 HELIX 3 AA3 SER A 159 ASN A 177 1 19 HELIX 4 AA4 ALA A 191 GLY A 196 5 6 HELIX 5 AA5 ASN A 209 LYS A 224 1 16 HELIX 6 AA6 TYR A 238 GLY A 256 1 19 HELIX 7 AA7 PHE A 273 ASN A 284 1 12 HELIX 8 AA8 SER A 294 GLY A 308 1 15 HELIX 9 AA9 GLY A 322 GLY A 328 1 7 HELIX 10 AB1 ALA A 329 GLU A 332 5 4 HELIX 11 AB2 ASN A 345 GLY A 361 1 17 HELIX 12 AB3 VAL A 367 ASN A 384 1 18 HELIX 13 AB4 ASN A 393 ALA A 404 1 12 HELIX 14 AB5 THR A 453 ILE A 458 1 6 SHEET 1 AA1 5 GLN A 126 ASP A 131 0 SHEET 2 AA1 5 LYS A 85 GLU A 90 1 N LEU A 88 O LEU A 128 SHEET 3 AA1 5 ILE A 153 GLN A 156 1 O ILE A 153 N ALA A 87 SHEET 4 AA1 5 LEU A 183 ASN A 186 1 O LEU A 185 N ILE A 154 SHEET 5 AA1 5 HIS A 203 ARG A 205 1 O PHE A 204 N ASN A 186 SHEET 1 AA2 7 GLU A 258 HIS A 265 0 SHEET 2 AA2 7 ARG A 230 GLN A 236 1 N ALA A 231 O GLU A 258 SHEET 3 AA2 7 THR A 287 THR A 290 1 O PHE A 289 N TYR A 232 SHEET 4 AA2 7 LYS A 312 THR A 315 1 O ALA A 314 N VAL A 288 SHEET 5 AA2 7 ILE A 335 THR A 338 1 O ILE A 335 N PHE A 313 SHEET 6 AA2 7 MET A 426 SER A 432 -1 O VAL A 427 N THR A 338 SHEET 7 AA2 7 GLY A 445 PHE A 452 -1 O LEU A 447 N GLU A 430 SHEET 1 AA3 3 SER A 405 THR A 408 0 SHEET 2 AA3 3 GLY A 411 MET A 415 -1 O GLY A 411 N THR A 408 SHEET 3 AA3 3 ALA A 422 LYS A 423 -1 O LYS A 423 N SER A 414 SSBOND 1 CYS A 199 CYS A 465 1555 1555 2.05 CRYST1 46.770 69.390 120.750 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021381 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014411 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008282 0.00000