HEADER SIGNALING PROTEIN 21-JUL-20 7JHP TITLE CRYSTAL STRUCTURE OF HRAS IN COMPLEX WITH THE RAS-BINDING AND TITLE 2 CYSTEINE-RICH DOMAINS OF CRAF-KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-166; COMPND 5 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RAF PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE; COMPND 10 CHAIN: C; COMPND 11 FRAGMENT: UNP RESIDUES 55-187; COMPND 12 SYNONYM: PROTO-ONCOGENE C-RAF,CRAF,RAF-1; COMPND 13 EC: 2.7.11.1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: RAF1, RAF; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RAS, RAF, RBD, CRD, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.COOKIS,C.MATTOS REVDAT 3 18-OCT-23 7JHP 1 JRNL REVDAT 2 25-AUG-21 7JHP 1 JRNL REVDAT 1 05-AUG-20 7JHP 0 JRNL AUTH T.COOKIS,C.MATTOS JRNL TITL CRYSTAL STRUCTURE REVEALS THE FULL RAS-RAF INTERFACE AND JRNL TITL 2 ADVANCES MECHANISTIC UNDERSTANDING OF RAF ACTIVATION. JRNL REF BIOMOLECULES V. 11 2021 JRNL REFN ESSN 2218-273X JRNL PMID 34356620 JRNL DOI 10.3390/BIOM11070996 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.COOKIS,C.MATTOS REMARK 1 TITL CRYSTAL STRUCTURE REVEALS THE FULL RAS:RAF INTERFACE AND REMARK 1 TITL 2 ADVANCES MECHANISTIC UNDERSTANDING OF RAF ACTIVATION REMARK 1 REF BIORXIV 2020 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2020.07.28.225938 REMARK 2 REMARK 2 RESOLUTION. 2.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 7159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 716 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.6100 - 4.7200 0.99 1438 160 0.2284 0.2393 REMARK 3 2 4.7200 - 3.7500 0.98 1386 154 0.1758 0.2666 REMARK 3 3 3.7500 - 3.2800 0.97 1367 152 0.2071 0.2678 REMARK 3 4 3.2800 - 2.9800 0.97 1363 151 0.2414 0.2938 REMARK 3 5 2.9800 - 2.7600 0.65 889 99 0.2398 0.2946 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.283 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.228 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2297 REMARK 3 ANGLE : 0.442 3118 REMARK 3 CHIRALITY : 0.040 362 REMARK 3 PLANARITY : 0.003 397 REMARK 3 DIHEDRAL : 7.511 1358 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 1 THROUGH 166) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0793 4.2863 25.4491 REMARK 3 T TENSOR REMARK 3 T11: 0.3031 T22: 0.2132 REMARK 3 T33: 0.2399 T12: -0.1049 REMARK 3 T13: 0.0220 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 2.7149 L22: 2.3715 REMARK 3 L33: 2.5941 L12: 0.4431 REMARK 3 L13: 0.8012 L23: -0.2737 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: 0.0232 S13: -0.3051 REMARK 3 S21: 0.0033 S22: 0.1015 S23: 0.2500 REMARK 3 S31: 0.3923 S32: -0.3080 S33: -0.0480 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 55 THROUGH 133) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5791 18.7468 7.6881 REMARK 3 T TENSOR REMARK 3 T11: 0.4751 T22: 0.3899 REMARK 3 T33: 0.6115 T12: -0.0670 REMARK 3 T13: -0.1211 T23: 0.0753 REMARK 3 L TENSOR REMARK 3 L11: 2.6218 L22: 1.2004 REMARK 3 L33: 1.5498 L12: -0.8257 REMARK 3 L13: -0.2077 L23: -0.2892 REMARK 3 S TENSOR REMARK 3 S11: -0.0440 S12: 0.7467 S13: 0.6027 REMARK 3 S21: 0.2487 S22: -0.1800 S23: -0.0393 REMARK 3 S31: -0.7689 S32: -0.0695 S33: 0.1375 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 136 THROUGH 187) REMARK 3 ORIGIN FOR THE GROUP (A): 45.1807 19.9736 11.1500 REMARK 3 T TENSOR REMARK 3 T11: 0.5004 T22: 0.7090 REMARK 3 T33: 0.3119 T12: -0.4876 REMARK 3 T13: -0.0074 T23: -0.0396 REMARK 3 L TENSOR REMARK 3 L11: 1.8044 L22: 1.8447 REMARK 3 L33: 0.9594 L12: 0.8409 REMARK 3 L13: -0.7249 L23: 0.2846 REMARK 3 S TENSOR REMARK 3 S11: -0.4176 S12: 0.9068 S13: 0.2770 REMARK 3 S21: -0.6728 S22: 0.6846 S23: 0.0562 REMARK 3 S31: -0.1069 S32: 0.2306 S33: 0.2335 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JHP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000250758. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7159 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.760 REMARK 200 RESOLUTION RANGE LOW (A) : 36.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.75800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRIES 4G0N & 1FAR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM ACETATE, 0.1 M BIS REMARK 280 -TRIS, PH 5.5, 17% W/V PEG10000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.24350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.17650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.24350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.17650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 323 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS C 103 REMARK 465 GLU C 104 REMARK 465 HIS C 105 REMARK 465 LYS C 106 REMARK 465 GLY C 107 REMARK 465 VAL C 134 REMARK 465 PRO C 135 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 GLN A 70 CG CD OE1 NE2 REMARK 470 GLU A 91 CG CD OE1 OE2 REMARK 470 ARG A 102 NE CZ NH1 NH2 REMARK 470 ASP A 107 CG OD1 OD2 REMARK 470 ARG A 135 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 56 CG OD1 ND2 REMARK 470 LYS C 65 CG CD CE NZ REMARK 470 ARG C 73 CD NE CZ NH1 NH2 REMARK 470 MET C 76 CG SD CE REMARK 470 ASP C 80 CG OD1 OD2 REMARK 470 LYS C 87 CG CD CE NZ REMARK 470 GLN C 92 CG CD OE1 NE2 REMARK 470 LEU C 102 CG CD1 CD2 REMARK 470 LYS C 108 CG CD CE NZ REMARK 470 LYS C 109 CG CD CE NZ REMARK 470 ASN C 115 CG OD1 ND2 REMARK 470 SER C 120 OG REMARK 470 HIS C 133 CG ND1 CD2 CE1 NE2 REMARK 470 LEU C 136 CG CD1 CD2 REMARK 470 THR C 137 OG1 CG2 REMARK 470 LYS C 148 CG CD CE NZ REMARK 470 LYS C 157 CD CE NZ REMARK 470 ARG C 164 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 179 CG CD CE NZ REMARK 470 ASP C 186 CG OD1 OD2 REMARK 470 TRP C 187 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 187 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 122 57.52 -90.98 REMARK 500 GLN A 165 -82.64 -96.37 REMARK 500 ASN C 56 67.53 -101.92 REMARK 500 THR C 138 122.38 69.22 REMARK 500 LEU C 149 109.42 -56.10 REMARK 500 CYS C 176 53.99 -107.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 332 DISTANCE = 6.99 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 83.3 REMARK 620 3 GNP A 201 O2G 172.8 90.0 REMARK 620 4 GNP A 201 O2B 96.6 170.2 89.6 REMARK 620 5 HOH A 301 O 92.8 96.9 85.5 73.3 REMARK 620 6 HOH A 305 O 87.7 95.6 95.5 94.3 167.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 139 ND1 REMARK 620 2 CYS C 165 SG 110.4 REMARK 620 3 CYS C 184 SG 92.4 108.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 152 SG REMARK 620 2 CYS C 155 SG 109.1 REMARK 620 3 HIS C 173 ND1 110.0 98.0 REMARK 620 4 CYS C 176 SG 119.0 101.2 116.5 REMARK 620 N 1 2 3 DBREF 7JHP A 1 166 UNP P01112 RASH_HUMAN 1 166 DBREF 7JHP C 55 187 UNP P04049 RAF1_HUMAN 55 187 SEQADV 7JHP CYS A 97 UNP P01112 ARG 97 ENGINEERED MUTATION SEQRES 1 A 166 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY GLY SEQRES 2 A 166 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 A 166 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 A 166 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 A 166 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 A 166 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 A 166 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 A 166 ASP ILE HIS GLN TYR CYS GLU GLN ILE LYS ARG VAL LYS SEQRES 9 A 166 ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 A 166 CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN ALA SEQRES 11 A 166 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE GLU SEQRES 12 A 166 THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA PHE SEQRES 13 A 166 TYR THR LEU VAL ARG GLU ILE ARG GLN HIS SEQRES 1 C 133 SER ASN THR ILE ARG VAL PHE LEU PRO ASN LYS GLN ARG SEQRES 2 C 133 THR VAL VAL ASN VAL ARG ASN GLY MET SER LEU HIS ASP SEQRES 3 C 133 CYS LEU MET LYS ALA LEU LYS VAL ARG GLY LEU GLN PRO SEQRES 4 C 133 GLU CYS CYS ALA VAL PHE ARG LEU LEU HIS GLU HIS LYS SEQRES 5 C 133 GLY LYS LYS ALA ARG LEU ASP TRP ASN THR ASP ALA ALA SEQRES 6 C 133 SER LEU ILE GLY GLU GLU LEU GLN VAL ASP PHE LEU ASP SEQRES 7 C 133 HIS VAL PRO LEU THR THR HIS ASN PHE ALA ARG LYS THR SEQRES 8 C 133 PHE LEU LYS LEU ALA PHE CYS ASP ILE CYS GLN LYS PHE SEQRES 9 C 133 LEU LEU ASN GLY PHE ARG CYS GLN THR CYS GLY TYR LYS SEQRES 10 C 133 PHE HIS GLU HIS CYS SER THR LYS VAL PRO THR MET CYS SEQRES 11 C 133 VAL ASP TRP HET GNP A 201 32 HET MG A 202 1 HET ZN C 201 1 HET ZN C 202 1 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM ZN ZINC ION FORMUL 3 GNP C10 H17 N6 O13 P3 FORMUL 4 MG MG 2+ FORMUL 5 ZN 2(ZN 2+) FORMUL 7 HOH *48(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 GLN A 61 ALA A 66 5 6 HELIX 3 AA3 MET A 67 GLY A 75 1 9 HELIX 4 AA4 ASN A 86 LYS A 104 1 19 HELIX 5 AA5 GLU A 126 TYR A 137 1 12 HELIX 6 AA6 GLY A 151 HIS A 166 1 16 HELIX 7 AA7 SER C 77 LEU C 82 1 6 HELIX 8 AA8 LEU C 82 VAL C 88 1 7 HELIX 9 AA9 GLN C 92 GLU C 94 5 3 HELIX 10 AB1 ASP C 117 ILE C 122 5 6 SHEET 1 AA1 6 GLU A 37 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O CYS A 51 N VAL A 44 SHEET 3 AA1 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O LEU A 79 N VAL A 7 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 TYR A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 5 GLN C 66 ASN C 71 0 SHEET 2 AA2 5 THR C 57 LEU C 62 -1 N VAL C 60 O THR C 68 SHEET 3 AA2 5 GLU C 125 PHE C 130 1 O VAL C 128 N PHE C 61 SHEET 4 AA2 5 CYS C 96 ARG C 100 -1 N PHE C 99 O GLN C 127 SHEET 5 AA2 5 ALA C 110 ARG C 111 -1 O ALA C 110 N ARG C 100 SHEET 1 AA3 3 PHE C 141 PHE C 151 0 SHEET 2 AA3 3 PHE C 158 CYS C 165 -1 O ARG C 164 N ALA C 142 SHEET 3 AA3 3 TYR C 170 PHE C 172 -1 O PHE C 172 N PHE C 163 LINK OG SER A 17 MG MG A 202 1555 1555 2.08 LINK OG1 THR A 35 MG MG A 202 1555 1555 1.99 LINK O2G GNP A 201 MG MG A 202 1555 1555 2.15 LINK O2B GNP A 201 MG MG A 202 1555 1555 2.07 LINK MG MG A 202 O HOH A 301 1555 1555 2.22 LINK MG MG A 202 O HOH A 305 1555 1555 2.05 LINK ND1 HIS C 139 ZN ZN C 202 1555 1555 2.33 LINK SG CYS C 152 ZN ZN C 201 1555 1555 2.52 LINK SG CYS C 155 ZN ZN C 201 1555 1555 2.46 LINK SG CYS C 165 ZN ZN C 202 1555 1555 2.42 LINK ND1 HIS C 173 ZN ZN C 201 1555 1555 2.13 LINK SG CYS C 176 ZN ZN C 201 1555 1555 2.56 LINK SG CYS C 184 ZN ZN C 202 1555 1555 2.48 CRYST1 94.487 44.353 74.395 90.00 103.95 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010583 0.000000 0.002628 0.00000 SCALE2 0.000000 0.022546 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013850 0.00000