HEADER IMMUNE SYSTEM 29-JUL-20 7JLK TITLE CRYSTAL STRUCTURE OF GLVRC01 FAB IN COMPLEX WITH ANTI-IDIOTYPE IV1 TITLE 2 SCFV COMPND MOL_ID: 1; COMPND 2 MOLECULE: IV1 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: GLVRC01 HEAVY CHAIN; COMPND 7 CHAIN: A; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: GLVRC01 LIGHT CHAIN; COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: IV1 LIGHT CHAIN; COMPND 15 CHAIN: L; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_TAXID: 10090; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM_CELL_LINE: 293; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 MOL_ID: 4; SOURCE 18 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 19 ORGANISM_TAXID: 10090; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS IV1, GLVRC01, FAB, SCFV, HIV-1, ANTI-IDIOTYPE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR C.WEIDLE,M.PANCERA REVDAT 3 18-OCT-23 7JLK 1 REMARK REVDAT 2 19-MAY-21 7JLK 1 JRNL REVDAT 1 31-MAR-21 7JLK 0 JRNL AUTH E.SEYDOUX,Y.H.WAN,J.FENG,A.WALL,S.ALJEDANI,L.J.HOMAD, JRNL AUTH 2 A.J.MACCAMY,C.WEIDLE,M.D.GRAY,L.BRUMAGE,J.J.TAYLOR, JRNL AUTH 3 M.PANCERA,L.STAMATATOS,A.T.MCGUIRE JRNL TITL DEVELOPMENT OF A VRC01-CLASS GERMLINE TARGETING IMMUNOGEN JRNL TITL 2 DERIVED FROM ANTI-IDIOTYPIC ANTIBODIES. JRNL REF CELL REP V. 35 09084 2021 JRNL REFN ESSN 2211-1247 JRNL PMID 33951425 JRNL DOI 10.1016/J.CELREP.2021.109084 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 44580 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2272 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6200 - 5.0200 1.00 2699 164 0.1764 0.2117 REMARK 3 2 5.0200 - 3.9900 1.00 2719 125 0.1311 0.1623 REMARK 3 3 3.9900 - 3.4800 1.00 2682 143 0.1482 0.2045 REMARK 3 4 3.4800 - 3.1600 1.00 2672 149 0.1650 0.2503 REMARK 3 5 3.1600 - 2.9400 1.00 2666 134 0.1859 0.2461 REMARK 3 6 2.9400 - 2.7600 1.00 2642 138 0.1892 0.2474 REMARK 3 7 2.7600 - 2.6300 1.00 2665 140 0.1989 0.2686 REMARK 3 8 2.6300 - 2.5100 1.00 2649 151 0.1961 0.2760 REMARK 3 9 2.5100 - 2.4200 1.00 2635 155 0.2121 0.2910 REMARK 3 10 2.4200 - 2.3300 1.00 2692 145 0.2048 0.2668 REMARK 3 11 2.3300 - 2.2600 1.00 2654 133 0.2238 0.3269 REMARK 3 12 2.2600 - 2.1900 1.00 2625 132 0.2340 0.2762 REMARK 3 13 2.1900 - 2.1400 0.99 2623 165 0.2366 0.3015 REMARK 3 14 2.1400 - 2.0800 0.99 2652 145 0.2400 0.2987 REMARK 3 15 2.0800 - 2.0400 0.99 2619 136 0.2726 0.3124 REMARK 3 16 2.0400 - 1.9900 0.90 2414 117 0.2669 0.3026 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.247 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.585 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5237 REMARK 3 ANGLE : 0.506 7102 REMARK 3 CHIRALITY : 0.043 783 REMARK 3 PLANARITY : 0.003 910 REMARK 3 DIHEDRAL : 11.279 3084 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JLK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000249513. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44594 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.15.2_3472 REMARK 200 STARTING MODEL: 6MFT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.0, PEG 8000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.00950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.62200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.00950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.62200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, A, B, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H 370 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 550 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY H 114 REMARK 465 SER H 115 REMARK 465 GLY H 116 REMARK 465 SER H 117 REMARK 465 GLY H 118 REMARK 465 HIS H 119 REMARK 465 HIS H 120 REMARK 465 HIS H 121 REMARK 465 HIS H 122 REMARK 465 HIS H 123 REMARK 465 HIS H 124 REMARK 465 GLY A 133 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 HIS A 225 REMARK 465 GLY L 113 REMARK 465 GLY L 114 REMARK 465 GLY L 115 REMARK 465 GLY L 116 REMARK 465 SER L 117 REMARK 465 GLY L 118 REMARK 465 GLY L 119 REMARK 465 GLY L 120 REMARK 465 GLY L 121 REMARK 465 SER L 122 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN H 1 CG CD OE1 NE2 REMARK 470 GLN H 3 CG CD OE1 NE2 REMARK 470 LYS H 13 CG CD CE NZ REMARK 470 THR H 73 OG1 CG2 REMARK 470 SER H 112 OG REMARK 470 GLN A 1 CG CD OE1 NE2 REMARK 470 SER A 128 OG REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 SER A 130 OG REMARK 470 THR A 131 OG1 CG2 REMARK 470 GLU A 212 CG CD OE1 OE2 REMARK 470 LYS A 214 CG CD CE NZ REMARK 470 SER A 215 OG REMARK 470 ASP A 217 CG OD1 OD2 REMARK 470 LYS A 218 CG CD CE NZ REMARK 470 LYS B 126 CG CD CE NZ REMARK 470 LYS B 183 CG CD CE NZ REMARK 470 LYS B 190 CG CD CE NZ REMARK 470 SER B 202 OG REMARK 470 SER L 112 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 445 O HOH B 538 1.95 REMARK 500 O LEU B 201 O HOH B 401 2.00 REMARK 500 OD2 ASP L 60 O HOH L 301 2.06 REMARK 500 OE1 GLN A 61 O HOH A 401 2.06 REMARK 500 O HOH A 401 O HOH L 359 2.06 REMARK 500 O ARG B 211 O HOH B 402 2.07 REMARK 500 O HOH A 467 O HOH A 555 2.10 REMARK 500 O HOH H 327 O HOH B 538 2.11 REMARK 500 NE2 GLN A 64 O HOH A 402 2.13 REMARK 500 O HOH A 487 O HOH A 576 2.13 REMARK 500 O HOH A 519 O HOH A 558 2.14 REMARK 500 OG1 THR B 129 O HOH B 403 2.14 REMARK 500 OD1 ASN A 199 O HOH A 403 2.15 REMARK 500 O HOH A 510 O HOH A 541 2.16 REMARK 500 O HOH B 460 O HOH B 494 2.17 REMARK 500 OG1 THR B 180 O HOH B 404 2.18 REMARK 500 O GLN B 124 OG SER B 127 2.19 REMARK 500 O HOH A 536 O HOH B 421 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU H 72 84.34 -152.40 REMARK 500 SER H 100A 170.78 177.13 REMARK 500 ASP A 144 73.00 57.81 REMARK 500 THR A 160 -43.02 -130.13 REMARK 500 ALA B 51 -36.47 75.95 REMARK 500 ALA B 84 -171.21 -171.04 REMARK 500 TYR B 91 -136.26 61.00 REMARK 500 ASN B 138 73.93 54.69 REMARK 500 LYS B 169 -61.25 -92.60 REMARK 500 LYS B 190 -55.49 -123.46 REMARK 500 GLU B 213 -156.17 -134.45 REMARK 500 ARG L 30 -119.22 53.31 REMARK 500 ALA L 51 -47.03 78.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 577 DISTANCE = 6.79 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA L 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 54 OG REMARK 620 2 HOH A 422 O 123.1 REMARK 620 3 ASN L 53 OD1 120.4 107.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 55 O REMARK 620 2 HOH A 507 O 121.1 REMARK 620 3 HOH A 509 O 108.5 128.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 163 O REMARK 620 2 HOH A 458 O 129.5 REMARK 620 3 HOH B 539 O 139.4 82.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 165 O REMARK 620 2 HOH A 488 O 125.9 REMARK 620 3 HOH A 506 O 78.0 67.2 REMARK 620 4 HOH B 482 O 113.0 119.4 145.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 203 O REMARK 620 2 HOH A 547 O 29.1 REMARK 620 3 HOH B 420 O 30.9 4.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 306 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 22 OG REMARK 620 2 THR B 72 OG1 129.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 307 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 38 OE1 REMARK 620 2 TYR B 87 OH 90.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 305 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 81 OE2 REMARK 620 2 HOH L 363 O 110.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 427 O REMARK 620 2 HOH B 558 O 115.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA L 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP L 1 O REMARK 620 2 HOH L 313 O 86.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA L 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP L 60 OD1 REMARK 620 2 ASP L 60 OD2 40.9 REMARK 620 3 HOH L 341 O 76.8 61.1 REMARK 620 N 1 2 DBREF 7JLK H 1 124 PDB 7JLK 7JLK 1 124 DBREF 7JLK A 1 225 PDB 7JLK 7JLK 1 225 DBREF 7JLK B 1 214 PDB 7JLK 7JLK 1 214 DBREF 7JLK L 1 122 PDB 7JLK 7JLK 1 122 SEQRES 1 H 133 GLN ILE GLN LEU VAL GLN SER GLY PRO GLU LEU LYS LYS SEQRES 2 H 133 PRO GLY GLU THR VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 133 TYR THR PHE THR ASN TYR GLU ILE ASN TRP VAL GLN GLN SEQRES 4 H 133 ALA PRO GLY LYS GLY LEU LYS LEU MET GLY TRP ILE ASN SEQRES 5 H 133 THR TYR THR GLY GLU PRO THR SER ALA ASP ASP PHE LYS SEQRES 6 H 133 GLY ARG PHE ALA PHE SER LEU GLU THR SER ALA SER THR SEQRES 7 H 133 ALA TYR LEU GLN ILE ASN ASN LEU LYS ASN GLU ASP ALA SEQRES 8 H 133 ALA THR TYR PHE CYS ALA ARG GLY ASP TYR TYR GLY SER SEQRES 9 H 133 SER SER ALA TRP LEU PRO TYR TRP GLY GLN GLY THR LEU SEQRES 10 H 133 VAL THR VAL SER ALA GLY SER GLY SER GLY HIS HIS HIS SEQRES 11 H 133 HIS HIS HIS SEQRES 1 A 233 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 A 233 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 A 233 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 A 233 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 A 233 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 A 233 GLY ARG VAL THR MET THR ARG ASP THR SER ILE SER THR SEQRES 7 A 233 ALA TYR MET GLU LEU SER ARG LEU ARG SER ASP ASP THR SEQRES 8 A 233 ALA VAL TYR TYR CYS ALA ARG GLY LYS ASN SER ASP TYR SEQRES 9 A 233 ASN TRP ASP PHE GLN HIS TRP GLY GLN GLY THR LEU VAL SEQRES 10 A 233 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 A 233 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 A 233 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 A 233 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 A 233 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 A 233 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 A 233 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 A 233 LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO SEQRES 18 A 233 LYS SER CYS ASP LYS THR HIS HIS HIS HIS HIS HIS SEQRES 1 B 210 GLU ILE VAL LEU THR GLN SER PRO ALA THR LEU SER LEU SEQRES 2 B 210 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 B 210 GLN SER VAL SER SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 B 210 PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP ALA SER SEQRES 5 B 210 ASN ARG ALA THR GLY ILE PRO ALA ARG PHE SER GLY SER SEQRES 6 B 210 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 B 210 GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN TYR SEQRES 8 B 210 GLU PHE PHE GLY GLN GLY THR LYS LEU GLU ILE LYS ARG SEQRES 9 B 210 THR VAL ALA ALA PRO SER VAL PHE ILE PHE PRO PRO SER SEQRES 10 B 210 ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL VAL CYS SEQRES 11 B 210 LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN SEQRES 12 B 210 TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SER GLN SEQRES 13 B 210 GLU SER VAL THR GLU GLN ASP SER LYS ASP SER THR TYR SEQRES 14 B 210 SER LEU SER SER THR LEU THR LEU SER LYS ALA ASP TYR SEQRES 15 B 210 GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR HIS GLN SEQRES 16 B 210 GLY LEU SER SER PRO VAL THR LYS SER PHE ASN ARG GLY SEQRES 17 B 210 GLU CYS SEQRES 1 L 122 ASP ILE VAL MET THR GLN SER GLN LYS PHE MET SER THR SEQRES 2 L 122 SER VAL GLY ASP ARG VAL SER ILE THR CYS LYS ALA SER SEQRES 3 L 122 GLN ASN VAL ARG THR ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 L 122 PRO GLY GLN SER PRO LYS ALA LEU ILE PHE LEU ALA SER SEQRES 5 L 122 ASN ARG HIS THR GLY VAL PRO ASP ARG PHE THR GLY SER SEQRES 6 L 122 GLY SER GLY THR ASP PHE THR LEU THR ILE SER ASN VAL SEQRES 7 L 122 GLN SER GLU ASP LEU ALA ASP TYR PHE CYS LEU GLN HIS SEQRES 8 L 122 TRP ASN TYR PRO LEU THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 122 GLU ILE LYS GLY GLY GLY GLY SER GLY GLY GLY GLY SER SEQRES 10 L 122 GLY GLY GLY GLY SER HET NA H 201 1 HET NA H 202 1 HET CL H 203 1 HET CL H 204 1 HET CL H 205 1 HET NA A 301 1 HET NA A 302 1 HET NA A 303 1 HET NA A 304 1 HET CL A 305 1 HET CL A 306 1 HET PEG A 307 17 HET EDO A 308 10 HET NA B 301 1 HET NA B 302 1 HET NA B 303 1 HET NA B 304 1 HET NA B 305 1 HET NA B 306 1 HET NA B 307 1 HET NA B 308 1 HET CL B 309 1 HET CL B 310 1 HET CL B 311 1 HET CL B 312 1 HET CL B 313 1 HET PEG B 314 17 HET PEG B 315 17 HET PEG B 316 17 HET PEG B 317 17 HET EDO B 318 10 HET EDO B 319 10 HET NA L 201 1 HET NA L 202 1 HET NA L 203 1 HET CL L 204 1 HET CL L 205 1 HET CL L 206 1 HET CL L 207 1 HET EDO L 208 10 HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 NA 17(NA 1+) FORMUL 7 CL 14(CL 1-) FORMUL 16 PEG 5(C4 H10 O3) FORMUL 17 EDO 4(C2 H6 O2) FORMUL 45 HOH *482(H2 O) HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 ASP H 61 LYS H 64 5 4 HELIX 3 AA3 THR H 73 ALA H 75 5 3 HELIX 4 AA4 LYS H 83 ALA H 87 5 5 HELIX 5 AA5 THR A 28 TYR A 32 5 5 HELIX 6 AA6 THR A 73 ILE A 75 5 3 HELIX 7 AA7 ARG A 83 THR A 87 5 5 HELIX 8 AA8 SER A 156 ALA A 158 5 3 HELIX 9 AA9 SER A 187 LEU A 189 5 3 HELIX 10 AB1 LYS A 201 ASN A 204 5 4 HELIX 11 AB2 GLU B 79 PHE B 83 5 5 HELIX 12 AB3 SER B 121 SER B 127 1 7 HELIX 13 AB4 LYS B 183 LYS B 188 1 6 HELIX 14 AB5 GLN L 79 LEU L 83 5 5 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA1 4 THR H 77 ILE H 82 -1 O LEU H 80 N ILE H 20 SHEET 4 AA1 4 PHE H 67 GLU H 72 -1 N ALA H 68 O GLN H 81 SHEET 1 AA2 6 GLU H 10 LYS H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 AA2 6 ALA H 88 ASP H 96 -1 N ALA H 88 O VAL H 109 SHEET 4 AA2 6 GLU H 33 ALA H 40 -1 N ASN H 35 O ALA H 93 SHEET 5 AA2 6 GLY H 44 ILE H 51 -1 O MET H 48 N TRP H 36 SHEET 6 AA2 6 PRO H 57 SER H 59 -1 O THR H 58 N TRP H 50 SHEET 1 AA3 4 GLU H 10 LYS H 12 0 SHEET 2 AA3 4 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 AA3 4 ALA H 88 ASP H 96 -1 N ALA H 88 O VAL H 109 SHEET 4 AA3 4 TRP H 100D TRP H 103 -1 O TYR H 102 N ARG H 94 SHEET 1 AA4 4 GLN A 3 GLN A 6 0 SHEET 2 AA4 4 VAL A 18 SER A 25 -1 O LYS A 23 N VAL A 5 SHEET 3 AA4 4 THR A 77 LEU A 82 -1 O MET A 80 N VAL A 20 SHEET 4 AA4 4 VAL A 67 ASP A 72 -1 N THR A 70 O TYR A 79 SHEET 1 AA5 6 GLU A 10 LYS A 12 0 SHEET 2 AA5 6 THR A 107 VAL A 111 1 O LEU A 108 N GLU A 10 SHEET 3 AA5 6 ALA A 88 GLY A 95 -1 N TYR A 90 O THR A 107 SHEET 4 AA5 6 MET A 34 GLN A 39 -1 N VAL A 37 O TYR A 91 SHEET 5 AA5 6 LEU A 45 ILE A 51 -1 O MET A 48 N TRP A 36 SHEET 6 AA5 6 THR A 57 TYR A 59 -1 O ASN A 58 N TRP A 50 SHEET 1 AA6 4 GLU A 10 LYS A 12 0 SHEET 2 AA6 4 THR A 107 VAL A 111 1 O LEU A 108 N GLU A 10 SHEET 3 AA6 4 ALA A 88 GLY A 95 -1 N TYR A 90 O THR A 107 SHEET 4 AA6 4 PHE A 100D TRP A 103 -1 O HIS A 102 N ARG A 94 SHEET 1 AA7 4 SER A 120 LEU A 124 0 SHEET 2 AA7 4 THR A 135 TYR A 145 -1 O LEU A 141 N PHE A 122 SHEET 3 AA7 4 TYR A 176 PRO A 185 -1 O TYR A 176 N TYR A 145 SHEET 4 AA7 4 VAL A 163 THR A 165 -1 N HIS A 164 O VAL A 181 SHEET 1 AA8 4 SER A 120 LEU A 124 0 SHEET 2 AA8 4 THR A 135 TYR A 145 -1 O LEU A 141 N PHE A 122 SHEET 3 AA8 4 TYR A 176 PRO A 185 -1 O TYR A 176 N TYR A 145 SHEET 4 AA8 4 VAL A 169 LEU A 170 -1 N VAL A 169 O SER A 177 SHEET 1 AA9 3 THR A 151 TRP A 154 0 SHEET 2 AA9 3 ILE A 195 HIS A 200 -1 O ASN A 197 N SER A 153 SHEET 3 AA9 3 THR A 205 ARG A 210 -1 O VAL A 207 N VAL A 198 SHEET 1 AB1 4 LEU B 4 SER B 7 0 SHEET 2 AB1 4 ALA B 19 ALA B 25 -1 O ARG B 24 N THR B 5 SHEET 3 AB1 4 ASP B 70 ILE B 75 -1 O PHE B 71 N CYS B 23 SHEET 4 AB1 4 PHE B 62 SER B 67 -1 N SER B 63 O THR B 74 SHEET 1 AB2 6 THR B 10 LEU B 13 0 SHEET 2 AB2 6 THR B 102 ILE B 106 1 O LYS B 103 N LEU B 11 SHEET 3 AB2 6 VAL B 85 GLN B 90 -1 N TYR B 86 O THR B 102 SHEET 4 AB2 6 ALA B 34 GLN B 38 -1 N TYR B 36 O TYR B 87 SHEET 5 AB2 6 ARG B 45 TYR B 49 -1 O LEU B 47 N TRP B 35 SHEET 6 AB2 6 ASN B 53 ARG B 54 -1 O ASN B 53 N TYR B 49 SHEET 1 AB3 4 THR B 10 LEU B 13 0 SHEET 2 AB3 4 THR B 102 ILE B 106 1 O LYS B 103 N LEU B 11 SHEET 3 AB3 4 VAL B 85 GLN B 90 -1 N TYR B 86 O THR B 102 SHEET 4 AB3 4 PHE B 97 PHE B 98 -1 O PHE B 97 N GLN B 90 SHEET 1 AB4 4 SER B 114 PHE B 118 0 SHEET 2 AB4 4 THR B 129 PHE B 139 -1 O LEU B 135 N PHE B 116 SHEET 3 AB4 4 TYR B 173 SER B 182 -1 O LEU B 175 N LEU B 136 SHEET 4 AB4 4 SER B 159 VAL B 163 -1 N GLN B 160 O THR B 178 SHEET 1 AB5 4 ALA B 153 LEU B 154 0 SHEET 2 AB5 4 LYS B 145 VAL B 150 -1 N VAL B 150 O ALA B 153 SHEET 3 AB5 4 VAL B 191 THR B 197 -1 O GLU B 195 N GLN B 147 SHEET 4 AB5 4 VAL B 205 ASN B 210 -1 O VAL B 205 N VAL B 196 SHEET 1 AB6 4 MET L 4 THR L 5 0 SHEET 2 AB6 4 VAL L 19 ALA L 25 -1 O LYS L 24 N THR L 5 SHEET 3 AB6 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AB6 4 PHE L 62 SER L 67 -1 N THR L 63 O THR L 74 SHEET 1 AB7 6 PHE L 10 THR L 13 0 SHEET 2 AB7 6 THR L 102 ILE L 106 1 O GLU L 105 N MET L 11 SHEET 3 AB7 6 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AB7 6 VAL L 33 GLN L 38 -1 N GLN L 38 O ASP L 85 SHEET 5 AB7 6 LYS L 45 PHE L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AB7 6 ASN L 53 ARG L 54 -1 O ASN L 53 N PHE L 49 SHEET 1 AB8 4 PHE L 10 THR L 13 0 SHEET 2 AB8 4 THR L 102 ILE L 106 1 O GLU L 105 N MET L 11 SHEET 3 AB8 4 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AB8 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 2 CYS A 22 CYS A 92 1555 1555 2.04 SSBOND 3 CYS A 140 CYS A 196 1555 1555 2.04 SSBOND 4 CYS B 23 CYS B 88 1555 1555 2.04 SSBOND 5 CYS B 134 CYS B 194 1555 1555 2.03 SSBOND 6 CYS L 23 CYS L 88 1555 1555 2.04 LINK OG SER H 100B NA NA H 201 1555 1555 2.51 LINK NA NA H 202 O HOH H 337 1555 1555 2.54 LINK OG SER A 54 NA NA L 201 1555 1555 2.85 LINK O GLY A 55 NA NA A 301 1555 1555 2.82 LINK O VAL A 163 NA NA A 302 1555 1555 3.02 LINK O THR A 165 NA NA A 303 1555 1555 2.95 LINK O SER A 203 NA NA B 304 1555 3445 2.41 LINK NA NA A 301 O HOH A 507 1555 1555 3.13 LINK NA NA A 301 O HOH A 509 1555 1555 2.49 LINK NA NA A 302 O HOH A 458 1555 1555 2.55 LINK NA NA A 302 O HOH B 539 1555 1555 2.61 LINK NA NA A 303 O HOH A 488 1555 1555 2.53 LINK NA NA A 303 O HOH A 506 1555 1555 3.16 LINK NA NA A 303 O HOH B 482 1555 1555 2.37 LINK NA NA A 304 O HOH A 437 1555 1555 2.74 LINK O HOH A 422 NA NA L 201 1555 1555 2.61 LINK O HOH A 522 NA NA B 308 1555 1555 2.99 LINK O HOH A 547 NA NA B 304 3555 1555 2.98 LINK OG SER B 22 NA NA B 306 1555 1555 2.44 LINK OE1 GLN B 38 NA NA B 307 1555 1555 2.64 LINK OG1 THR B 72 NA NA B 306 1555 1555 2.77 LINK OE2 GLU B 81 NA NA B 305 1555 1555 2.34 LINK OH TYR B 87 NA NA B 307 1555 1555 2.86 LINK OE2 GLU B 161 NA NA B 301 1555 1555 2.55 LINK NA NA B 303 O HOH B 427 1555 1555 2.65 LINK NA NA B 303 O HOH B 558 1555 1555 2.78 LINK NA NA B 304 O HOH B 420 1555 1555 2.95 LINK NA NA B 305 O HOH L 363 1555 3455 2.64 LINK O ASP L 1 NA NA L 203 1555 1555 2.85 LINK OD1 ASN L 53 NA NA L 201 1555 1555 2.68 LINK OD1 ASP L 60 NA NA L 202 1555 1555 3.12 LINK OD2 ASP L 60 NA NA L 202 1555 1555 3.17 LINK NA NA L 202 O HOH L 341 1555 1555 2.39 LINK NA NA L 203 O HOH L 313 1555 1555 2.94 CISPEP 1 PHE A 146 PRO A 147 0 -3.24 CISPEP 2 GLU A 148 PRO A 149 0 -1.33 CISPEP 3 SER B 7 PRO B 8 0 -6.56 CISPEP 4 TYR B 140 PRO B 141 0 3.63 CISPEP 5 TYR L 94 PRO L 95 0 -2.07 CRYST1 70.019 85.244 113.636 90.00 99.73 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014282 0.000000 0.002450 0.00000 SCALE2 0.000000 0.011731 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008929 0.00000