HEADER TRANSFERASE 29-JUL-20 7JLM TITLE CRYSTAL STRUCTURE OF BACILLUS SUBTILIS UPPS IN COMPLEX WITH MAC- TITLE 2 0547630 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPRENYL TRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: UNDECAPRENYL PYROPHOSPHATE SYNTHASE; COMPND 5 EC: 2.5.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: UPPS, A3772_08985, B4122_2664, B4417_3501, BS16045_01759, SOURCE 5 ETA10_09020, ETK61_09295, GII79_08795, SC09_CONTIG19ORF01203; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS UNDECAPRENYL, CIS-PRENYLTRANSFERASE, CARRIER LIPID, MAC-0547630, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.D.WORKMAN,N.C.J.STRYNADKA REVDAT 4 18-OCT-23 7JLM 1 REMARK REVDAT 3 06-OCT-21 7JLM 1 JRNL REVDAT 2 15-SEP-21 7JLM 1 JRNL REVDAT 1 04-AUG-21 7JLM 0 JRNL AUTH S.D.WORKMAN,J.DAY,M.A.FARHA,S.S.EL ZAHED,C.BON,E.D.BROWN, JRNL AUTH 2 M.G.ORGAN,N.C.J.STRYNADKA JRNL TITL STRUCTURAL INSIGHTS INTO THE INHIBITION OF UNDECAPRENYL JRNL TITL 2 PYROPHOSPHATE SYNTHASE FROM GRAM-POSITIVE BACTERIA. JRNL REF J.MED.CHEM. V. 64 13540 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34473495 JRNL DOI 10.1021/ACS.JMEDCHEM.1C00941 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.500 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 26832 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1374 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 79.5100 - 4.9600 1.00 2699 143 0.1541 0.1875 REMARK 3 2 4.9500 - 3.9300 1.00 2539 181 0.1451 0.2092 REMARK 3 3 3.9300 - 3.4400 1.00 2539 152 0.1849 0.2641 REMARK 3 4 3.4400 - 3.1200 1.00 2550 136 0.2297 0.2978 REMARK 3 5 3.1200 - 2.9000 1.00 2539 128 0.2435 0.3281 REMARK 3 6 2.9000 - 2.7300 1.00 2533 141 0.2517 0.3013 REMARK 3 7 2.7300 - 2.5900 0.99 2483 151 0.2596 0.3211 REMARK 3 8 2.5900 - 2.4800 1.00 2518 136 0.2670 0.3436 REMARK 3 9 2.4800 - 2.3800 0.99 2514 110 0.3068 0.3039 REMARK 3 10 2.3800 - 2.3000 1.00 2544 96 0.3410 0.4159 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8879 -4.4998 -24.3456 REMARK 3 T TENSOR REMARK 3 T11: 0.5280 T22: 0.7787 REMARK 3 T33: 0.3126 T12: 0.1273 REMARK 3 T13: 0.0695 T23: -0.0613 REMARK 3 L TENSOR REMARK 3 L11: 3.3402 L22: 4.3822 REMARK 3 L33: 6.9775 L12: 2.2773 REMARK 3 L13: 1.2008 L23: 0.3127 REMARK 3 S TENSOR REMARK 3 S11: 0.0235 S12: -0.2593 S13: 0.2137 REMARK 3 S21: 0.4453 S22: -0.1397 S23: 0.4192 REMARK 3 S31: -0.9065 S32: -0.2694 S33: 0.1120 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5824 -16.9909 -16.6810 REMARK 3 T TENSOR REMARK 3 T11: 0.6391 T22: 0.9399 REMARK 3 T33: 0.3317 T12: -0.0955 REMARK 3 T13: 0.0820 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 7.4683 L22: 6.1847 REMARK 3 L33: 6.3808 L12: -0.2760 REMARK 3 L13: -1.8211 L23: -0.5302 REMARK 3 S TENSOR REMARK 3 S11: 0.2035 S12: -0.2643 S13: -0.1598 REMARK 3 S21: 1.0545 S22: -0.3628 S23: 0.2590 REMARK 3 S31: 0.0428 S32: -0.4601 S33: 0.1358 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4436 -15.7285 -35.8232 REMARK 3 T TENSOR REMARK 3 T11: 0.2897 T22: 0.9131 REMARK 3 T33: 0.3021 T12: 0.0187 REMARK 3 T13: 0.0017 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 0.7255 L22: 7.4794 REMARK 3 L33: 2.5056 L12: -0.8099 REMARK 3 L13: -0.2089 L23: 0.8241 REMARK 3 S TENSOR REMARK 3 S11: -0.1081 S12: -0.0001 S13: -0.0037 REMARK 3 S21: 0.4478 S22: 0.0594 S23: 0.4230 REMARK 3 S31: -0.1514 S32: -0.3975 S33: 0.0607 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0882 -6.1795 -16.4044 REMARK 3 T TENSOR REMARK 3 T11: 0.6007 T22: 0.6256 REMARK 3 T33: 0.3304 T12: 0.0725 REMARK 3 T13: 0.0428 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 3.5391 L22: 6.8147 REMARK 3 L33: 6.9559 L12: 3.0346 REMARK 3 L13: -0.9947 L23: -3.6661 REMARK 3 S TENSOR REMARK 3 S11: -0.1929 S12: 0.4241 S13: -0.2292 REMARK 3 S21: -0.1532 S22: 0.0237 S23: -0.2344 REMARK 3 S31: 0.2476 S32: 0.3958 S33: 0.1363 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 93 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5884 -8.2869 -24.2511 REMARK 3 T TENSOR REMARK 3 T11: 0.6566 T22: 0.9377 REMARK 3 T33: 0.3382 T12: -0.2055 REMARK 3 T13: 0.0588 T23: -0.1268 REMARK 3 L TENSOR REMARK 3 L11: 4.9712 L22: 8.7320 REMARK 3 L33: 7.0865 L12: -1.7075 REMARK 3 L13: 1.3798 L23: -0.5250 REMARK 3 S TENSOR REMARK 3 S11: -0.3930 S12: 1.1612 S13: -0.0273 REMARK 3 S21: -0.2072 S22: 0.1735 S23: 0.0598 REMARK 3 S31: 0.5582 S32: -0.2106 S33: 0.2380 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7684 -5.9620 -4.6804 REMARK 3 T TENSOR REMARK 3 T11: 0.7064 T22: 0.3841 REMARK 3 T33: 0.2933 T12: 0.0034 REMARK 3 T13: 0.0116 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 3.5334 L22: 0.8023 REMARK 3 L33: 2.6817 L12: -0.0212 REMARK 3 L13: -0.2992 L23: 0.0164 REMARK 3 S TENSOR REMARK 3 S11: -0.0885 S12: 0.4798 S13: -0.2891 REMARK 3 S21: 0.1098 S22: -0.0479 S23: -0.0639 REMARK 3 S31: 0.2135 S32: 0.2071 S33: 0.1571 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JLM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000251011. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26950 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 79.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 23.60 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 23.50 REMARK 200 R MERGE FOR SHELL (I) : 0.98000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7JLI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3000, NACITRATE, PH 5.5, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.51200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.51200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.86200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.70000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.86200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.70000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 79.51200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.86200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.70000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 79.51200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.86200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.70000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -79.51200 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 ASN A 3 REMARK 465 ILE A 4 REMARK 465 LEU A 5 REMARK 465 LYS A 6 REMARK 465 ASN A 7 REMARK 465 TRP A 8 REMARK 465 LYS A 9 REMARK 465 ASN A 10 REMARK 465 GLN A 11 REMARK 465 GLN A 12 REMARK 465 THR A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 SER A 16 REMARK 465 ASN A 17 REMARK 465 LEU A 18 REMARK 465 GLU A 19 REMARK 465 ARG A 256 REMARK 465 PHE A 257 REMARK 465 GLY A 258 REMARK 465 GLY A 259 REMARK 465 ILE A 260 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 ASN B 3 REMARK 465 ILE B 4 REMARK 465 LEU B 5 REMARK 465 LYS B 6 REMARK 465 ASN B 7 REMARK 465 TRP B 8 REMARK 465 LYS B 9 REMARK 465 ASN B 10 REMARK 465 GLN B 11 REMARK 465 GLN B 12 REMARK 465 THR B 13 REMARK 465 ALA B 14 REMARK 465 ALA B 15 REMARK 465 SER B 16 REMARK 465 ASN B 17 REMARK 465 LEU B 18 REMARK 465 GLU B 19 REMARK 465 ARG B 256 REMARK 465 PHE B 257 REMARK 465 GLY B 258 REMARK 465 GLY B 259 REMARK 465 ILE B 260 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 198 -124.87 53.28 REMARK 500 SER A 210 13.00 81.73 REMARK 500 ILE A 213 78.28 -111.33 REMARK 500 LYS B 239 -164.83 -101.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue V07 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue V07 B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7JLI RELATED DB: PDB REMARK 900 APO FORM DBREF1 7JLM A 1 260 UNP A0A063XDJ9_BACIU DBREF2 7JLM A A0A063XDJ9 1 260 DBREF1 7JLM B 1 260 UNP A0A063XDJ9_BACIU DBREF2 7JLM B A0A063XDJ9 1 260 SEQRES 1 A 260 MET LEU ASN ILE LEU LYS ASN TRP LYS ASN GLN GLN THR SEQRES 2 A 260 ALA ALA SER ASN LEU GLU ARG TYR THR LYS GLU ASP ILE SEQRES 3 A 260 LEU LYS GLY GLU ILE PRO GLU HIS ILE ALA ILE ILE MET SEQRES 4 A 260 ASP GLY ASN GLY ARG TRP ALA LYS LYS ARG SER LEU PRO SEQRES 5 A 260 ARG ILE ALA GLY HIS HIS GLU GLY MET LYS VAL VAL LYS SEQRES 6 A 260 ARG THR THR LYS LEU ALA ASN GLU LEU GLY VAL LYS VAL SEQRES 7 A 260 LEU THR LEU TYR ALA PHE SER THR GLU ASN TRP LYS ARG SEQRES 8 A 260 PRO LYS MET GLU VAL ASP PHE LEU MET LYS LEU PRO GLU SEQRES 9 A 260 GLU PHE LEU ASN THR TYR LEU PRO GLU LEU VAL GLU GLU SEQRES 10 A 260 ASN VAL GLN VAL ARG ILE ILE GLY ASP GLU THR ALA LEU SEQRES 11 A 260 PRO ALA HIS THR LEU ARG ALA ILE GLU LYS ALA VAL GLN SEQRES 12 A 260 ASP THR ALA GLN ASN ASP GLY MET ILE LEU ASN PHE ALA SEQRES 13 A 260 LEU ASN TYR GLY GLY ARG THR GLU ILE VAL SER ALA ALA SEQRES 14 A 260 LYS SER LEU ALA GLU LYS VAL LYS GLU GLY SER LEU ASN SEQRES 15 A 260 ILE GLU ASP ILE ASP GLU SER LEU PHE SER THR TYR LEU SEQRES 16 A 260 MET THR GLU SER LEU GLN ASP PRO GLU LEU LEU ILE ARG SEQRES 17 A 260 THR SER GLY GLU ILE ARG LEU SER ASN PHE MET LEU TRP SEQRES 18 A 260 GLN VAL ALA TYR SER GLU PHE VAL PHE THR ASP VAL LEU SEQRES 19 A 260 TRP PRO ASP PHE LYS GLU ASP HIS PHE LEU GLN ALA LEU SEQRES 20 A 260 GLY GLU PHE GLN GLN ARG GLY ARG ARG PHE GLY GLY ILE SEQRES 1 B 260 MET LEU ASN ILE LEU LYS ASN TRP LYS ASN GLN GLN THR SEQRES 2 B 260 ALA ALA SER ASN LEU GLU ARG TYR THR LYS GLU ASP ILE SEQRES 3 B 260 LEU LYS GLY GLU ILE PRO GLU HIS ILE ALA ILE ILE MET SEQRES 4 B 260 ASP GLY ASN GLY ARG TRP ALA LYS LYS ARG SER LEU PRO SEQRES 5 B 260 ARG ILE ALA GLY HIS HIS GLU GLY MET LYS VAL VAL LYS SEQRES 6 B 260 ARG THR THR LYS LEU ALA ASN GLU LEU GLY VAL LYS VAL SEQRES 7 B 260 LEU THR LEU TYR ALA PHE SER THR GLU ASN TRP LYS ARG SEQRES 8 B 260 PRO LYS MET GLU VAL ASP PHE LEU MET LYS LEU PRO GLU SEQRES 9 B 260 GLU PHE LEU ASN THR TYR LEU PRO GLU LEU VAL GLU GLU SEQRES 10 B 260 ASN VAL GLN VAL ARG ILE ILE GLY ASP GLU THR ALA LEU SEQRES 11 B 260 PRO ALA HIS THR LEU ARG ALA ILE GLU LYS ALA VAL GLN SEQRES 12 B 260 ASP THR ALA GLN ASN ASP GLY MET ILE LEU ASN PHE ALA SEQRES 13 B 260 LEU ASN TYR GLY GLY ARG THR GLU ILE VAL SER ALA ALA SEQRES 14 B 260 LYS SER LEU ALA GLU LYS VAL LYS GLU GLY SER LEU ASN SEQRES 15 B 260 ILE GLU ASP ILE ASP GLU SER LEU PHE SER THR TYR LEU SEQRES 16 B 260 MET THR GLU SER LEU GLN ASP PRO GLU LEU LEU ILE ARG SEQRES 17 B 260 THR SER GLY GLU ILE ARG LEU SER ASN PHE MET LEU TRP SEQRES 18 B 260 GLN VAL ALA TYR SER GLU PHE VAL PHE THR ASP VAL LEU SEQRES 19 B 260 TRP PRO ASP PHE LYS GLU ASP HIS PHE LEU GLN ALA LEU SEQRES 20 B 260 GLY GLU PHE GLN GLN ARG GLY ARG ARG PHE GLY GLY ILE HET CIT A 301 13 HET V07 A 302 24 HET CIT B 301 13 HET V07 B 302 24 HETNAM CIT CITRIC ACID HETNAM V07 7-(AZEPAN-1-YL)-3-(4-FLUOROPHENYL)-5-METHYLPYRAZOLO[1, HETNAM 2 V07 5-A]PYRIMIDINE HETSYN V07 MAC-0547630 FORMUL 3 CIT 2(C6 H8 O7) FORMUL 4 V07 2(C19 H21 F N4) FORMUL 7 HOH *80(H2 O) HELIX 1 AA1 THR A 22 GLY A 29 1 8 HELIX 2 AA2 GLY A 41 ARG A 49 1 9 HELIX 3 AA3 PRO A 52 GLY A 75 1 24 HELIX 4 AA4 GLU A 87 ARG A 91 5 5 HELIX 5 AA5 PRO A 92 MET A 100 1 9 HELIX 6 AA6 LYS A 101 GLU A 117 1 17 HELIX 7 AA7 ASP A 126 LEU A 130 5 5 HELIX 8 AA8 PRO A 131 THR A 145 1 15 HELIX 9 AA9 GLY A 160 GLU A 178 1 19 HELIX 10 AB1 ASN A 182 ILE A 186 5 5 HELIX 11 AB2 ASP A 187 TYR A 194 1 8 HELIX 12 AB3 LEU A 234 PHE A 238 5 5 HELIX 13 AB4 LYS A 239 ARG A 253 1 15 HELIX 14 AB5 THR B 22 LYS B 28 1 7 HELIX 15 AB6 GLY B 41 ARG B 49 1 9 HELIX 16 AB7 PRO B 52 GLY B 75 1 24 HELIX 17 AB8 GLU B 87 ARG B 91 5 5 HELIX 18 AB9 PRO B 92 MET B 100 1 9 HELIX 19 AC1 LYS B 101 GLU B 117 1 17 HELIX 20 AC2 ASP B 126 LEU B 130 5 5 HELIX 21 AC3 PRO B 131 THR B 145 1 15 HELIX 22 AC4 GLY B 160 GLU B 178 1 19 HELIX 23 AC5 ASN B 182 ILE B 186 5 5 HELIX 24 AC6 ASP B 187 THR B 193 1 7 HELIX 25 AC7 LEU B 220 ALA B 224 5 5 HELIX 26 AC8 LEU B 234 PHE B 238 5 5 HELIX 27 AC9 LYS B 239 GLY B 254 1 16 SHEET 1 AA1 6 GLN A 120 ILE A 124 0 SHEET 2 AA1 6 ILE A 152 TYR A 159 1 O LEU A 153 N GLN A 120 SHEET 3 AA1 6 VAL A 78 SER A 85 1 N LEU A 81 O ALA A 156 SHEET 4 AA1 6 HIS A 34 ILE A 38 1 N ILE A 37 O THR A 80 SHEET 5 AA1 6 LEU A 205 ARG A 208 1 O ILE A 207 N ALA A 36 SHEET 6 AA1 6 GLU A 227 PHE A 230 1 O GLU A 227 N LEU A 206 SHEET 1 AA2 6 GLN B 120 ILE B 124 0 SHEET 2 AA2 6 ILE B 152 TYR B 159 1 O LEU B 153 N ARG B 122 SHEET 3 AA2 6 VAL B 78 SER B 85 1 N LEU B 81 O ALA B 156 SHEET 4 AA2 6 HIS B 34 ILE B 38 1 N ILE B 35 O THR B 80 SHEET 5 AA2 6 LEU B 205 ARG B 208 1 O ILE B 207 N ILE B 38 SHEET 6 AA2 6 GLU B 227 PHE B 230 1 O VAL B 229 N LEU B 206 SITE 1 AC1 6 ASN A 88 LYS A 90 ARG A 208 ARG A 214 SITE 2 AC1 6 SER A 216 HOH A 435 SITE 1 AC2 14 MET A 39 ASN A 42 HIS A 57 GLY A 60 SITE 2 AC2 14 MET A 61 ALA A 83 LEU A 99 LEU A 102 SITE 3 AC2 14 PRO A 103 PHE A 106 ILE A 123 ILE A 138 SITE 4 AC2 14 PHE A 155 LEU A 157 SITE 1 AC3 7 MET B 39 ASP B 40 GLY B 41 ASN B 42 SITE 2 AC3 7 GLY B 43 ARG B 44 HIS B 57 SITE 1 AC4 14 MET B 39 ASN B 42 HIS B 57 MET B 61 SITE 2 AC4 14 VAL B 64 LEU B 99 MET B 100 LEU B 102 SITE 3 AC4 14 PRO B 103 PHE B 106 LEU B 107 ILE B 138 SITE 4 AC4 14 PHE B 155 LEU B 157 CRYST1 85.724 87.400 159.024 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011665 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011442 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006288 0.00000