HEADER CHAPERONE 15-AUG-20 7JSQ TITLE REFINED STRUCTURE OF THE C-TERMINAL DOMAIN OF DNAJB6B COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNAJ HOMOLOG SUBFAMILY B MEMBER 6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN, RESIDUES 185-241; COMPND 5 SYNONYM: HHDJ1,HEAT SHOCK PROTEIN J2,HSJ-2,MRJ,MSJ-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DNAJB6, HSJ2, MRJ, MSJ1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CHAPERONE, ANTI-AGGREGATION, HSP40 EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR T.K.KARAMANOS,G.M.CLORE REVDAT 3 01-MAY-24 7JSQ 1 REMARK REVDAT 2 16-DEC-20 7JSQ 1 JRNL REVDAT 1 02-DEC-20 7JSQ 0 JRNL AUTH T.K.KARAMANOS,V.TUGARINOV,G.M.CLORE JRNL TITL AN S/T MOTIF CONTROLS REVERSIBLE OLIGOMERIZATION OF THE JRNL TITL 2 HSP40 CHAPERONE DNAJB6B THROUGH SUBTLE REORGANIZATION OF A JRNL TITL 3 BETA SHEET BACKBONE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 30441 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 33199640 JRNL DOI 10.1073/PNAS.2020306117 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JSQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1000251321. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : 187 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.2 MM [U-13C; U-15N] CTD, 20 MM REMARK 210 SODIUM PHOSPHATE, 150 MM SODIUM REMARK 210 CHLORIDE, 0.02 % V/V SODIUM REMARK 210 AZIDE, 95% H2O/5% D2O; 0.2 MM [U- REMARK 210 13C; U-15N] CTD, 20 MM SODIUM REMARK 210 PHOSPHATE, 150 MM SODIUM REMARK 210 CHLORIDE, 0.02 % V/V SODIUM REMARK 210 AZIDE, 4.2 % V/V C12E5 PEG, 11.6 REMARK 210 MM HEXANOL, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCACB; HAHBCONH; 3D HHC REMARK 210 -NOESY; 3D HCC-NOESY; CNH 13C- REMARK 210 HMQC-NOESY-15N-HSQC; IPAP HSQC; REMARK 210 JMOD 1H13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III HD REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, CCPNMR ANALYSIS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET A 134 REMARK 465 GLY A 135 REMARK 465 ASN A 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 145 117.03 -175.88 REMARK 500 1 GLU A 159 -107.77 -107.69 REMARK 500 1 GLN A 172 113.24 -170.21 REMARK 500 1 LEU A 176 92.73 -166.58 REMARK 500 1 ASN A 179 31.77 37.89 REMARK 500 1 LYS A 181 105.62 -161.01 REMARK 500 1 GLN A 183 148.53 -170.35 REMARK 500 1 LEU A 184 -71.77 -91.29 REMARK 500 1 ARG A 186 65.63 -151.51 REMARK 500 2 LYS A 145 117.35 -175.45 REMARK 500 2 GLU A 159 -79.74 -125.45 REMARK 500 2 ASN A 160 47.71 -85.23 REMARK 500 2 GLN A 172 96.35 -165.64 REMARK 500 2 LYS A 174 -0.51 -145.32 REMARK 500 2 LEU A 176 85.14 -152.65 REMARK 500 2 ARG A 186 -59.70 -164.56 REMARK 500 3 LYS A 145 114.21 -178.92 REMARK 500 3 LYS A 151 78.81 -69.84 REMARK 500 3 GLU A 159 -83.13 -130.46 REMARK 500 3 ASN A 160 49.49 -87.54 REMARK 500 3 GLN A 172 111.48 -175.26 REMARK 500 3 LEU A 184 -168.97 -125.15 REMARK 500 3 ARG A 186 34.11 -146.66 REMARK 500 3 ASN A 189 172.99 56.74 REMARK 500 4 LYS A 145 117.99 -178.04 REMARK 500 4 GLU A 159 -93.27 -106.75 REMARK 500 4 ASN A 160 49.87 -81.48 REMARK 500 4 GLN A 172 118.02 -166.68 REMARK 500 4 LEU A 176 106.82 -165.34 REMARK 500 4 ASN A 179 45.30 34.01 REMARK 500 5 LYS A 145 113.82 -174.19 REMARK 500 5 ASN A 148 -64.73 65.04 REMARK 500 5 GLU A 159 -85.22 -112.86 REMARK 500 5 ASN A 160 54.17 -94.61 REMARK 500 5 GLN A 172 100.55 -170.14 REMARK 500 5 LYS A 174 -1.81 -140.10 REMARK 500 5 ASN A 179 40.03 36.26 REMARK 500 5 ARG A 186 47.23 -156.13 REMARK 500 6 LYS A 145 113.71 -172.48 REMARK 500 6 ASN A 148 -70.70 60.62 REMARK 500 6 GLU A 159 -88.78 -111.34 REMARK 500 6 LEU A 176 91.56 -167.97 REMARK 500 6 ASN A 179 38.16 36.05 REMARK 500 6 LYS A 181 96.52 -162.60 REMARK 500 6 ARG A 186 -56.84 -163.56 REMARK 500 6 ASN A 189 -71.89 67.46 REMARK 500 7 LYS A 145 -168.43 -169.63 REMARK 500 7 GLU A 159 -93.45 -110.26 REMARK 500 7 ASN A 179 81.58 18.80 REMARK 500 7 LYS A 181 109.39 -160.15 REMARK 500 REMARK 500 THIS ENTRY HAS 82 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6U3S RELATED DB: PDB REMARK 900 RELATED ID: 6U3R RELATED DB: PDB REMARK 900 RELATED ID: 30656 RELATED DB: BMRB DBREF 7JSQ A 134 190 UNP O75190 DNJB6_HUMAN 185 241 SEQRES 1 A 57 MET GLY ASN PHE LYS SER ILE SER THR SER THR LYS MET SEQRES 2 A 57 VAL ASN GLY ARG LYS ILE THR THR LYS ARG ILE VAL GLU SEQRES 3 A 57 ASN GLY GLN GLU ARG VAL GLU VAL GLU GLU ASP GLY GLN SEQRES 4 A 57 LEU LYS SER LEU THR ILE ASN GLY LYS GLU GLN LEU LEU SEQRES 5 A 57 ARG LEU ASP ASN LYS SHEET 1 AA1 4 LYS A 138 VAL A 147 0 SHEET 2 AA1 4 ARG A 150 VAL A 158 -1 SHEET 3 AA1 4 GLU A 163 GLU A 169 -1 SHEET 4 AA1 4 GLN A 172 ILE A 178 -1 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1