HEADER TRANSFERASE/INHIBITOR 28-AUG-20 7JXY TITLE STRUCTURE OF TTBK1 KINASE DOMAIN IN COMPLEX WITH COMPOUND 18 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAU-TUBULIN KINASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BRAIN-DERIVED TAU KINASE; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TTBK1, BDTK, KIAA1855; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS TAU TUBULIN BINDING KINASE, KINASE, TRANSFERASE, TRANSFERASE- KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.V.CHODAPRAMBIL REVDAT 3 18-OCT-23 7JXY 1 REMARK REVDAT 2 26-MAY-21 7JXY 1 JRNL REVDAT 1 19-MAY-21 7JXY 0 JRNL AUTH T.HALKINA,J.L.HENDERSON,E.Y.LIN,M.K.HIMMELBAUER,J.H.JONES, JRNL AUTH 2 M.NEVALAINEN,J.FENG,K.KING,M.ROONEY,J.L.JOHNSON, JRNL AUTH 3 D.J.MARCOTTE,J.V.CHODAPARAMBIL,P.R.KUMAR,T.A.PATTERSON, JRNL AUTH 4 P.MURUGAN,E.SCHUMAN,L.WONG,T.HESSON,S.LAMORE,C.BAO, JRNL AUTH 5 M.CALHOUN,H.CERTO,B.AMARAL,G.M.DILLON,R.GILFILLAN, JRNL AUTH 6 F.G.DE TURISO JRNL TITL DISCOVERY OF POTENT AND BRAIN-PENETRANT TAU TUBULIN KINASE 1 JRNL TITL 2 (TTBK1) INHIBITORS THAT LOWER TAU PHOSPHORYLATION IN VIVO. JRNL REF J.MED.CHEM. V. 64 6358 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 33944571 JRNL DOI 10.1021/ACS.JMEDCHEM.1C00382 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874+SVN REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 32634 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1634 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8400 - 4.9200 1.00 2801 149 0.1856 0.2233 REMARK 3 2 4.9200 - 3.9000 1.00 2652 140 0.1754 0.2168 REMARK 3 3 3.9000 - 3.4100 1.00 2608 138 0.2022 0.2406 REMARK 3 4 3.4100 - 3.1000 1.00 2585 135 0.2281 0.2863 REMARK 3 5 3.1000 - 2.8800 1.00 2580 135 0.2336 0.2774 REMARK 3 6 2.8800 - 2.7100 1.00 2561 135 0.2388 0.2803 REMARK 3 7 2.7100 - 2.5700 1.00 2527 133 0.2323 0.2661 REMARK 3 8 2.5700 - 2.4600 1.00 2576 136 0.2226 0.2656 REMARK 3 9 2.4600 - 2.3600 1.00 2550 134 0.2062 0.2125 REMARK 3 10 2.3600 - 2.2800 1.00 2537 134 0.2010 0.2431 REMARK 3 11 2.2800 - 2.2100 1.00 2539 134 0.1922 0.2118 REMARK 3 12 2.2100 - 2.1500 0.98 2484 131 0.2015 0.2493 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.229 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.957 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4715 REMARK 3 ANGLE : 0.991 6365 REMARK 3 CHIRALITY : 0.052 679 REMARK 3 PLANARITY : 0.006 816 REMARK 3 DIHEDRAL : 17.343 1749 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7815 -33.7293 9.5401 REMARK 3 T TENSOR REMARK 3 T11: 0.4722 T22: 0.5127 REMARK 3 T33: 0.5889 T12: -0.0082 REMARK 3 T13: -0.0080 T23: -0.1674 REMARK 3 L TENSOR REMARK 3 L11: 2.1243 L22: 2.0059 REMARK 3 L33: 5.1242 L12: -1.1777 REMARK 3 L13: 1.7177 L23: 1.1653 REMARK 3 S TENSOR REMARK 3 S11: 0.2811 S12: 0.2420 S13: -0.0962 REMARK 3 S21: -0.0487 S22: 0.1653 S23: -0.4824 REMARK 3 S31: 0.1676 S32: 0.5334 S33: -0.3503 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6335 -16.2924 23.7447 REMARK 3 T TENSOR REMARK 3 T11: 0.3746 T22: 0.3642 REMARK 3 T33: 0.3155 T12: 0.0220 REMARK 3 T13: 0.0367 T23: -0.0444 REMARK 3 L TENSOR REMARK 3 L11: 3.6248 L22: 2.9595 REMARK 3 L33: 3.0620 L12: -0.4046 REMARK 3 L13: 1.3680 L23: 0.7841 REMARK 3 S TENSOR REMARK 3 S11: 0.0866 S12: 0.1466 S13: 0.1957 REMARK 3 S21: -0.1021 S22: -0.1467 S23: 0.1066 REMARK 3 S31: -0.2741 S32: -0.0583 S33: 0.0616 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1613 -37.5296 39.1344 REMARK 3 T TENSOR REMARK 3 T11: 0.4715 T22: 0.6230 REMARK 3 T33: 0.5506 T12: -0.0354 REMARK 3 T13: -0.0379 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 2.7109 L22: 1.9823 REMARK 3 L33: 2.5707 L12: 0.6515 REMARK 3 L13: 1.8624 L23: 0.5290 REMARK 3 S TENSOR REMARK 3 S11: -0.1651 S12: 0.1429 S13: -0.1410 REMARK 3 S21: -0.2743 S22: -0.0162 S23: 0.3227 REMARK 3 S31: -0.1926 S32: -0.2049 S33: 0.1591 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8741 -52.2307 54.8045 REMARK 3 T TENSOR REMARK 3 T11: 0.5743 T22: 0.5396 REMARK 3 T33: 0.7760 T12: -0.0131 REMARK 3 T13: -0.0809 T23: 0.1213 REMARK 3 L TENSOR REMARK 3 L11: 3.3405 L22: 2.4067 REMARK 3 L33: 4.4340 L12: -0.1244 REMARK 3 L13: 1.5522 L23: -0.1491 REMARK 3 S TENSOR REMARK 3 S11: 0.1501 S12: -0.3707 S13: -0.5924 REMARK 3 S21: -0.0036 S22: -0.0170 S23: 0.0780 REMARK 3 S31: 1.0918 S32: -0.7856 S33: -0.1750 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8295 -35.9878 53.2932 REMARK 3 T TENSOR REMARK 3 T11: 0.3880 T22: 0.4704 REMARK 3 T33: 0.4401 T12: -0.0574 REMARK 3 T13: -0.0534 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 3.6504 L22: 2.3457 REMARK 3 L33: 3.7201 L12: 0.7139 REMARK 3 L13: 1.7981 L23: -0.0878 REMARK 3 S TENSOR REMARK 3 S11: -0.0759 S12: 0.1659 S13: 0.0607 REMARK 3 S21: 0.0442 S22: -0.0219 S23: 0.2539 REMARK 3 S31: -0.3326 S32: -0.1413 S33: 0.0746 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 205 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9058 -36.3640 68.1336 REMARK 3 T TENSOR REMARK 3 T11: 0.6233 T22: 0.5812 REMARK 3 T33: 0.4650 T12: -0.0844 REMARK 3 T13: -0.0450 T23: 0.0772 REMARK 3 L TENSOR REMARK 3 L11: 2.8655 L22: 2.6907 REMARK 3 L33: 4.0102 L12: -0.1117 REMARK 3 L13: 0.7494 L23: -0.0412 REMARK 3 S TENSOR REMARK 3 S11: 0.0054 S12: -0.5822 S13: -0.0550 REMARK 3 S21: 0.7480 S22: -0.1860 S23: 0.0744 REMARK 3 S31: -0.0963 S32: -0.1462 S33: 0.1235 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 286 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5349 -44.9723 56.4333 REMARK 3 T TENSOR REMARK 3 T11: 0.6371 T22: 0.6949 REMARK 3 T33: 0.5796 T12: 0.0465 REMARK 3 T13: -0.1200 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 1.7108 L22: 1.9490 REMARK 3 L33: 1.3764 L12: -0.2503 REMARK 3 L13: 0.6267 L23: 0.6355 REMARK 3 S TENSOR REMARK 3 S11: 0.2437 S12: 0.4231 S13: -0.2412 REMARK 3 S21: -0.3498 S22: -0.1219 S23: -0.3353 REMARK 3 S31: 0.1091 S32: 0.5994 S33: -0.1438 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JXY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1000251561. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36437 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NFM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BISTRIS PH 6.0 AND 35% PEG3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.71500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.64000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.64000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 113.57250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.64000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.64000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.85750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.64000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.64000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 113.57250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.64000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.64000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.85750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 75.71500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 12 REMARK 465 HIS A 13 REMARK 465 MET A 14 REMARK 465 SER A 15 REMARK 465 GLY A 16 REMARK 465 GLY A 17 REMARK 465 GLY A 18 REMARK 465 GLU A 19 REMARK 465 GLN A 20 REMARK 465 ALA A 21 REMARK 465 ASP A 22 REMARK 465 ALA A 313 REMARK 465 GLY A 314 REMARK 465 THR A 315 REMARK 465 ASP A 316 REMARK 465 ALA A 317 REMARK 465 LEU A 318 REMARK 465 LEU A 319 REMARK 465 SER A 320 REMARK 465 THR A 321 REMARK 465 SER A 322 REMARK 465 THR A 323 REMARK 465 SER A 324 REMARK 465 THR A 325 REMARK 465 PRO A 326 REMARK 465 PRO A 327 REMARK 465 GLN A 328 REMARK 465 GLN A 329 REMARK 465 ASN A 330 REMARK 465 THR A 331 REMARK 465 ARG A 332 REMARK 465 GLN A 333 REMARK 465 THR A 334 REMARK 465 ALA A 335 REMARK 465 ALA A 336 REMARK 465 MET A 337 REMARK 465 PHE A 338 REMARK 465 GLY A 339 REMARK 465 VAL A 340 REMARK 465 VAL A 341 REMARK 465 ASN A 342 REMARK 465 VAL A 343 REMARK 465 GLY B 12 REMARK 465 HIS B 13 REMARK 465 MET B 14 REMARK 465 SER B 15 REMARK 465 GLY B 16 REMARK 465 GLY B 17 REMARK 465 GLY B 18 REMARK 465 GLU B 19 REMARK 465 ASN B 185 REMARK 465 THR B 186 REMARK 465 THR B 187 REMARK 465 GLY B 188 REMARK 465 ARG B 200 REMARK 465 ALA B 313 REMARK 465 GLY B 314 REMARK 465 THR B 315 REMARK 465 ASP B 316 REMARK 465 ALA B 317 REMARK 465 LEU B 318 REMARK 465 LEU B 319 REMARK 465 SER B 320 REMARK 465 THR B 321 REMARK 465 SER B 322 REMARK 465 THR B 323 REMARK 465 SER B 324 REMARK 465 THR B 325 REMARK 465 PRO B 326 REMARK 465 PRO B 327 REMARK 465 GLN B 328 REMARK 465 GLN B 329 REMARK 465 ASN B 330 REMARK 465 THR B 331 REMARK 465 ARG B 332 REMARK 465 GLN B 333 REMARK 465 THR B 334 REMARK 465 ALA B 335 REMARK 465 ALA B 336 REMARK 465 MET B 337 REMARK 465 PHE B 338 REMARK 465 GLY B 339 REMARK 465 VAL B 340 REMARK 465 VAL B 341 REMARK 465 ASN B 342 REMARK 465 VAL B 343 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 23 CG1 CG2 CD1 REMARK 470 GLN A 68 CG CD OE1 NE2 REMARK 470 LYS A 71 CG CD CE NZ REMARK 470 GLN A 72 CG CD OE1 NE2 REMARK 470 ARG A 98 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 ARG A 200 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 243 CG CD CE NZ REMARK 470 GLU A 246 CG CD OE1 OE2 REMARK 470 GLN A 247 CG CD OE1 NE2 REMARK 470 MET A 250 CG SD CE REMARK 470 LYS A 254 CD CE NZ REMARK 470 LYS A 262 CD CE NZ REMARK 470 LYS A 298 CG CD CE NZ REMARK 470 LYS A 312 CG CD CE NZ REMARK 470 GLN B 20 CG CD OE1 NE2 REMARK 470 LYS B 31 CD CE NZ REMARK 470 LYS B 35 CG CD CE NZ REMARK 470 LEU B 55 CG CD1 CD2 REMARK 470 LYS B 71 CG CD CE NZ REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 GLU B 100 CG CD OE1 OE2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 THR B 184 OG1 CG2 REMARK 470 ASP B 189 CG OD1 OD2 REMARK 470 ARG B 191 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 192 CG CD REMARK 470 ARG B 194 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 195 CG OD1 ND2 REMARK 470 VAL B 196 CG1 CG2 REMARK 470 LYS B 241 CG CD CE NZ REMARK 470 LYS B 243 CG CD CE NZ REMARK 470 GLU B 246 CG CD OE1 OE2 REMARK 470 LYS B 254 CD CE NZ REMARK 470 GLU B 256 CG CD OE1 OE2 REMARK 470 ARG B 258 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 GLU B 304 CG CD OE1 OE2 REMARK 470 LYS B 312 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN A 72 NZ LYS A 75 1.98 REMARK 500 NZ LYS B 212 OE2 GLU B 253 2.03 REMARK 500 OE1 GLU B 77 O1 VSY B 401 2.13 REMARK 500 OE2 GLU A 77 O1 VSY A 401 2.14 REMARK 500 NZ LYS A 39 OE1 GLU A 47 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 299 OH TYR B 255 5455 1.95 REMARK 500 OG SER B 167 OD2 ASP B 273 3444 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 119 CB - CG - CD ANGL. DEV. = 22.9 DEGREES REMARK 500 ARG B 240 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 153 -1.64 75.59 REMARK 500 ASP A 176 73.13 61.71 REMARK 500 ASN A 185 -167.99 -125.06 REMARK 500 ALA B 67 9.23 -63.68 REMARK 500 ARG B 153 -0.77 76.29 REMARK 500 ASP B 176 73.97 61.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 240 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VSY A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VSY B 401 DBREF 7JXY A 15 343 UNP Q5TCY1 TTBK1_HUMAN 15 343 DBREF 7JXY B 15 343 UNP Q5TCY1 TTBK1_HUMAN 15 343 SEQADV 7JXY GLY A 12 UNP Q5TCY1 EXPRESSION TAG SEQADV 7JXY HIS A 13 UNP Q5TCY1 EXPRESSION TAG SEQADV 7JXY MET A 14 UNP Q5TCY1 EXPRESSION TAG SEQADV 7JXY GLY B 12 UNP Q5TCY1 EXPRESSION TAG SEQADV 7JXY HIS B 13 UNP Q5TCY1 EXPRESSION TAG SEQADV 7JXY MET B 14 UNP Q5TCY1 EXPRESSION TAG SEQRES 1 A 332 GLY HIS MET SER GLY GLY GLY GLU GLN ALA ASP ILE LEU SEQRES 2 A 332 PRO ALA ASN TYR VAL VAL LYS ASP ARG TRP LYS VAL LEU SEQRES 3 A 332 LYS LYS ILE GLY GLY GLY GLY PHE GLY GLU ILE TYR GLU SEQRES 4 A 332 ALA MET ASP LEU LEU THR ARG GLU ASN VAL ALA LEU LYS SEQRES 5 A 332 VAL GLU SER ALA GLN GLN PRO LYS GLN VAL LEU LYS MET SEQRES 6 A 332 GLU VAL ALA VAL LEU LYS LYS LEU GLN GLY LYS ASP HIS SEQRES 7 A 332 VAL CYS ARG PHE ILE GLY CYS GLY ARG ASN GLU LYS PHE SEQRES 8 A 332 ASN TYR VAL VAL MET GLN LEU GLN GLY ARG ASN LEU ALA SEQRES 9 A 332 ASP LEU ARG ARG SER GLN PRO ARG GLY THR PHE THR LEU SEQRES 10 A 332 SER THR THR LEU ARG LEU GLY LYS GLN ILE LEU GLU SER SEQRES 11 A 332 ILE GLU ALA ILE HIS SER VAL GLY PHE LEU HIS ARG ASP SEQRES 12 A 332 ILE LYS PRO SER ASN PHE ALA MET GLY ARG LEU PRO SER SEQRES 13 A 332 THR TYR ARG LYS CYS TYR MET LEU ASP PHE GLY LEU ALA SEQRES 14 A 332 ARG GLN TYR THR ASN THR THR GLY ASP VAL ARG PRO PRO SEQRES 15 A 332 ARG ASN VAL ALA GLY PHE ARG GLY THR VAL ARG TYR ALA SEQRES 16 A 332 SER VAL ASN ALA HIS LYS ASN ARG GLU MET GLY ARG HIS SEQRES 17 A 332 ASP ASP LEU TRP SER LEU PHE TYR MET LEU VAL GLU PHE SEQRES 18 A 332 ALA VAL GLY GLN LEU PRO TRP ARG LYS ILE LYS ASP LYS SEQRES 19 A 332 GLU GLN VAL GLY MET ILE LYS GLU LYS TYR GLU HIS ARG SEQRES 20 A 332 MET LEU LEU LYS HIS MET PRO SER GLU PHE HIS LEU PHE SEQRES 21 A 332 LEU ASP HIS ILE ALA SER LEU ASP TYR PHE THR LYS PRO SEQRES 22 A 332 ASP TYR GLN LEU ILE MET SER VAL PHE GLU ASN SER MET SEQRES 23 A 332 LYS GLU ARG GLY ILE ALA GLU ASN GLU ALA PHE ASP TRP SEQRES 24 A 332 GLU LYS ALA GLY THR ASP ALA LEU LEU SER THR SER THR SEQRES 25 A 332 SER THR PRO PRO GLN GLN ASN THR ARG GLN THR ALA ALA SEQRES 26 A 332 MET PHE GLY VAL VAL ASN VAL SEQRES 1 B 332 GLY HIS MET SER GLY GLY GLY GLU GLN ALA ASP ILE LEU SEQRES 2 B 332 PRO ALA ASN TYR VAL VAL LYS ASP ARG TRP LYS VAL LEU SEQRES 3 B 332 LYS LYS ILE GLY GLY GLY GLY PHE GLY GLU ILE TYR GLU SEQRES 4 B 332 ALA MET ASP LEU LEU THR ARG GLU ASN VAL ALA LEU LYS SEQRES 5 B 332 VAL GLU SER ALA GLN GLN PRO LYS GLN VAL LEU LYS MET SEQRES 6 B 332 GLU VAL ALA VAL LEU LYS LYS LEU GLN GLY LYS ASP HIS SEQRES 7 B 332 VAL CYS ARG PHE ILE GLY CYS GLY ARG ASN GLU LYS PHE SEQRES 8 B 332 ASN TYR VAL VAL MET GLN LEU GLN GLY ARG ASN LEU ALA SEQRES 9 B 332 ASP LEU ARG ARG SER GLN PRO ARG GLY THR PHE THR LEU SEQRES 10 B 332 SER THR THR LEU ARG LEU GLY LYS GLN ILE LEU GLU SER SEQRES 11 B 332 ILE GLU ALA ILE HIS SER VAL GLY PHE LEU HIS ARG ASP SEQRES 12 B 332 ILE LYS PRO SER ASN PHE ALA MET GLY ARG LEU PRO SER SEQRES 13 B 332 THR TYR ARG LYS CYS TYR MET LEU ASP PHE GLY LEU ALA SEQRES 14 B 332 ARG GLN TYR THR ASN THR THR GLY ASP VAL ARG PRO PRO SEQRES 15 B 332 ARG ASN VAL ALA GLY PHE ARG GLY THR VAL ARG TYR ALA SEQRES 16 B 332 SER VAL ASN ALA HIS LYS ASN ARG GLU MET GLY ARG HIS SEQRES 17 B 332 ASP ASP LEU TRP SER LEU PHE TYR MET LEU VAL GLU PHE SEQRES 18 B 332 ALA VAL GLY GLN LEU PRO TRP ARG LYS ILE LYS ASP LYS SEQRES 19 B 332 GLU GLN VAL GLY MET ILE LYS GLU LYS TYR GLU HIS ARG SEQRES 20 B 332 MET LEU LEU LYS HIS MET PRO SER GLU PHE HIS LEU PHE SEQRES 21 B 332 LEU ASP HIS ILE ALA SER LEU ASP TYR PHE THR LYS PRO SEQRES 22 B 332 ASP TYR GLN LEU ILE MET SER VAL PHE GLU ASN SER MET SEQRES 23 B 332 LYS GLU ARG GLY ILE ALA GLU ASN GLU ALA PHE ASP TRP SEQRES 24 B 332 GLU LYS ALA GLY THR ASP ALA LEU LEU SER THR SER THR SEQRES 25 B 332 SER THR PRO PRO GLN GLN ASN THR ARG GLN THR ALA ALA SEQRES 26 B 332 MET PHE GLY VAL VAL ASN VAL HET VSY A 401 23 HET VSY B 401 23 HETNAM VSY (3S)-1-[1-(2-AMINOPYRIMIDIN-4-YL)-1H-PYRAZOLO[4,3- HETNAM 2 VSY C]PYRIDIN-6-YL]-3-METHYLPENT-1-YN-3-OL FORMUL 3 VSY 2(C16 H16 N6 O) FORMUL 5 HOH *35(H2 O) HELIX 1 AA1 VAL A 73 LEU A 84 1 12 HELIX 2 AA2 ASN A 113 GLN A 121 1 9 HELIX 3 AA3 THR A 127 VAL A 148 1 22 HELIX 4 AA4 LYS A 156 SER A 158 5 3 HELIX 5 AA5 ASP A 176 ALA A 180 5 5 HELIX 6 AA6 SER A 207 LYS A 212 1 6 HELIX 7 AA7 GLY A 217 GLY A 235 1 19 HELIX 8 AA8 ASP A 244 TYR A 255 1 12 HELIX 9 AA9 GLU A 256 MET A 264 5 9 HELIX 10 AB1 PRO A 265 SER A 266 5 2 HELIX 11 AB2 GLU A 267 LEU A 278 1 12 HELIX 12 AB3 ASP A 285 ARG A 300 1 16 HELIX 13 AB4 PHE A 308 LYS A 312 5 5 HELIX 14 AB5 VAL B 73 LEU B 84 1 12 HELIX 15 AB6 ASN B 113 GLN B 121 1 9 HELIX 16 AB7 THR B 127 VAL B 148 1 22 HELIX 17 AB8 LYS B 156 SER B 158 5 3 HELIX 18 AB9 ASP B 176 ALA B 180 5 5 HELIX 19 AC1 SER B 207 LYS B 212 1 6 HELIX 20 AC2 GLY B 217 GLY B 235 1 19 HELIX 21 AC3 ASP B 244 TYR B 255 1 12 HELIX 22 AC4 ARG B 258 LYS B 262 5 5 HELIX 23 AC5 GLU B 267 SER B 277 1 11 HELIX 24 AC6 ASP B 285 GLY B 301 1 17 SHEET 1 AA1 6 VAL A 29 VAL A 30 0 SHEET 2 AA1 6 TRP A 34 GLY A 41 -1 O TRP A 34 N VAL A 30 SHEET 3 AA1 6 GLU A 47 ASP A 53 -1 O ILE A 48 N GLY A 41 SHEET 4 AA1 6 GLU A 58 SER A 66 -1 O VAL A 64 N GLU A 47 SHEET 5 AA1 6 PHE A 102 GLN A 108 -1 O ASN A 103 N GLU A 65 SHEET 6 AA1 6 PHE A 93 ARG A 98 -1 N GLY A 95 O VAL A 106 SHEET 1 AA2 2 PHE A 150 LEU A 151 0 SHEET 2 AA2 2 ARG A 181 GLN A 182 -1 O ARG A 181 N LEU A 151 SHEET 1 AA3 2 PHE A 160 MET A 162 0 SHEET 2 AA3 2 CYS A 172 MET A 174 -1 O TYR A 173 N ALA A 161 SHEET 1 AA4 6 VAL B 29 VAL B 30 0 SHEET 2 AA4 6 TRP B 34 GLY B 41 -1 O TRP B 34 N VAL B 30 SHEET 3 AA4 6 GLU B 47 ASP B 53 -1 O ILE B 48 N ILE B 40 SHEET 4 AA4 6 ASN B 59 SER B 66 -1 O LEU B 62 N TYR B 49 SHEET 5 AA4 6 PHE B 102 GLN B 108 -1 O ASN B 103 N GLU B 65 SHEET 6 AA4 6 PHE B 93 ARG B 98 -1 N GLY B 95 O VAL B 106 SHEET 1 AA5 2 PHE B 150 LEU B 151 0 SHEET 2 AA5 2 ARG B 181 GLN B 182 -1 O ARG B 181 N LEU B 151 SHEET 1 AA6 2 PHE B 160 MET B 162 0 SHEET 2 AA6 2 CYS B 172 MET B 174 -1 O TYR B 173 N ALA B 161 SITE 1 AC1 11 ILE A 48 ALA A 61 LYS A 63 GLU A 77 SITE 2 AC1 11 VAL A 105 MET A 107 GLN A 108 GLN A 110 SITE 3 AC1 11 LEU A 175 ASP A 176 PHE A 177 SITE 1 AC2 9 ILE B 48 ALA B 61 LYS B 63 GLU B 77 SITE 2 AC2 9 MET B 107 GLN B 108 GLN B 110 ASP B 176 SITE 3 AC2 9 PHE B 177 CRYST1 87.280 87.280 151.430 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011457 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011457 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006604 0.00000