HEADER TRANSCRIPTION 30-AUG-20 7JYD TITLE HUMAN LIVER RECEPTOR HOMOLOG-1 IN COMPLEX WITH 10CA AND A FRAGMENT OF TITLE 2 TIF2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A MEMBER 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NUCLEAR RECEPTOR LIGAND-BINDING DOMAIN; COMPND 5 SYNONYM: ALPHA-1-FETOPROTEIN TRANSCRIPTION FACTOR,B1-BINDING FACTOR, COMPND 6 HB1F,CYP7A PROMOTER-BINDING FACTOR,HEPATOCYTIC TRANSCRIPTION FACTOR, COMPND 7 LIVER RECEPTOR HOMOLOG 1,LRH-1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 2; COMPND 11 CHAIN: C; COMPND 12 FRAGMENT: RESIDUES 740-751; COMPND 13 SYNONYM: NCOA-2,CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 75,BHLHE75, COMPND 14 TRANSCRIPTIONAL INTERMEDIARY FACTOR 2,HTIF2; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NR5A2, B1F, CPF, FTF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS AGONIST, NUCLEAR RECEPTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR E.H.D'AGOSTINO,S.G.MAYS,E.A.ORTLUND REVDAT 2 18-OCT-23 7JYD 1 REMARK REVDAT 1 02-MAR-22 7JYD 0 JRNL AUTH E.H.D'AGOSTINO,S.G.MAYS,A.F.FLYNN,X.HUANG,G.WANG,X.LIU, JRNL AUTH 2 E.J.MILLINGS,C.D.OKAFOR,A.PATEL,M.L.CATO,J.C.CORNELISON, JRNL AUTH 3 R.HOUTMAN,D.D.MOORE,J.W.CALVERT,N.T.JUI,E.A.ORTLUND JRNL TITL TAPPING INTO A PHOSPHOLIPID-LRH-1 AXIS YIELDS A POWERFUL JRNL TITL 2 ANTI-INFLAMMATORY AGENT WITH IN VIVO ACTIVITY AGAINST JRNL TITL 3 COLITIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12-2829-000 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 21640 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1087 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.7700 - 4.6000 1.00 2699 144 0.1756 0.2373 REMARK 3 2 4.6000 - 3.6500 1.00 2594 135 0.1709 0.2104 REMARK 3 3 3.6500 - 3.1900 1.00 2595 137 0.1935 0.2025 REMARK 3 4 3.1900 - 2.9000 1.00 2550 133 0.2235 0.2361 REMARK 3 5 2.9000 - 2.6900 1.00 2532 136 0.1941 0.2274 REMARK 3 6 2.6900 - 2.5300 1.00 2548 135 0.2210 0.2507 REMARK 3 7 2.5300 - 2.4100 1.00 2541 132 0.2147 0.2633 REMARK 3 8 2.4100 - 2.3000 0.99 2494 135 0.2471 0.2717 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2115 REMARK 3 ANGLE : 0.518 2858 REMARK 3 CHIRALITY : 0.035 322 REMARK 3 PLANARITY : 0.003 362 REMARK 3 DIHEDRAL : 7.296 284 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 299 THROUGH 314 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6347 -18.1056 -23.9521 REMARK 3 T TENSOR REMARK 3 T11: 0.6548 T22: 0.5512 REMARK 3 T33: 0.7152 T12: -0.0962 REMARK 3 T13: -0.0705 T23: 0.1699 REMARK 3 L TENSOR REMARK 3 L11: 8.0267 L22: 4.3235 REMARK 3 L33: 8.4649 L12: -0.3817 REMARK 3 L13: 1.1902 L23: 5.9440 REMARK 3 S TENSOR REMARK 3 S11: -0.1715 S12: 0.4851 S13: 0.8683 REMARK 3 S21: -0.9682 S22: -0.2391 S23: 0.9025 REMARK 3 S31: -0.9279 S32: -0.0732 S33: 0.5208 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 315 THROUGH 362 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9045 -2.5171 -2.4430 REMARK 3 T TENSOR REMARK 3 T11: 0.7890 T22: 0.5218 REMARK 3 T33: 0.7527 T12: 0.0408 REMARK 3 T13: 0.0090 T23: -0.1319 REMARK 3 L TENSOR REMARK 3 L11: 5.7794 L22: 6.1988 REMARK 3 L33: 4.6707 L12: 4.8383 REMARK 3 L13: 2.7963 L23: 2.7297 REMARK 3 S TENSOR REMARK 3 S11: -0.0358 S12: -0.6721 S13: 1.4598 REMARK 3 S21: 0.5547 S22: -0.3011 S23: 1.0327 REMARK 3 S31: -0.8499 S32: -0.5244 S33: 0.4550 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 363 THROUGH 397 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2659 -19.3587 -9.0635 REMARK 3 T TENSOR REMARK 3 T11: 0.5010 T22: 0.4155 REMARK 3 T33: 0.4389 T12: -0.0594 REMARK 3 T13: -0.0681 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 4.9950 L22: 8.6717 REMARK 3 L33: 7.6889 L12: 5.1531 REMARK 3 L13: -2.1130 L23: -0.7077 REMARK 3 S TENSOR REMARK 3 S11: -0.1687 S12: -0.0702 S13: 0.1221 REMARK 3 S21: -0.1004 S22: -0.0668 S23: 0.5237 REMARK 3 S31: 0.0040 S32: -0.4098 S33: 0.2046 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 398 THROUGH 421 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.7380 -0.9124 -10.6920 REMARK 3 T TENSOR REMARK 3 T11: 0.8871 T22: 0.5649 REMARK 3 T33: 0.5757 T12: -0.1922 REMARK 3 T13: -0.0736 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 9.7186 L22: 7.5002 REMARK 3 L33: 4.5781 L12: -2.0899 REMARK 3 L13: 6.0817 L23: -3.5163 REMARK 3 S TENSOR REMARK 3 S11: -0.5882 S12: 1.2122 S13: 0.8692 REMARK 3 S21: -0.4018 S22: -0.1341 S23: 0.1117 REMARK 3 S31: -0.9816 S32: 1.0923 S33: 0.6146 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 422 THROUGH 440 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.7786 -12.3416 -12.7566 REMARK 3 T TENSOR REMARK 3 T11: 0.4297 T22: 0.5008 REMARK 3 T33: 0.4220 T12: -0.1670 REMARK 3 T13: 0.0191 T23: -0.0605 REMARK 3 L TENSOR REMARK 3 L11: 7.0499 L22: 9.1930 REMARK 3 L33: 5.1344 L12: 4.9527 REMARK 3 L13: 4.6083 L23: 5.7032 REMARK 3 S TENSOR REMARK 3 S11: -0.5759 S12: 0.9143 S13: -0.3605 REMARK 3 S21: 0.0053 S22: 0.6270 S23: -0.6420 REMARK 3 S31: 0.1164 S32: 1.5279 S33: -0.4503 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 441 THROUGH 494 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.1664 -25.6291 -19.8108 REMARK 3 T TENSOR REMARK 3 T11: 0.3352 T22: 0.4058 REMARK 3 T33: 0.3542 T12: -0.0930 REMARK 3 T13: -0.0317 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 7.0783 L22: 7.0827 REMARK 3 L33: 9.0007 L12: 3.5453 REMARK 3 L13: -0.9599 L23: -1.4305 REMARK 3 S TENSOR REMARK 3 S11: 0.0512 S12: 0.5305 S13: -0.3708 REMARK 3 S21: -0.1770 S22: -0.0297 S23: -0.2778 REMARK 3 S31: -0.0102 S32: 0.3650 S33: 0.0851 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 495 THROUGH 522 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.2589 -19.7277 -6.4258 REMARK 3 T TENSOR REMARK 3 T11: 0.4073 T22: 0.3191 REMARK 3 T33: 0.3954 T12: -0.0477 REMARK 3 T13: -0.0718 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 4.4772 L22: 7.0646 REMARK 3 L33: 4.2909 L12: 2.7526 REMARK 3 L13: 3.3794 L23: 5.2601 REMARK 3 S TENSOR REMARK 3 S11: 0.1942 S12: -0.2878 S13: -0.2799 REMARK 3 S21: 0.9951 S22: 0.6214 S23: -0.4481 REMARK 3 S31: 1.4501 S32: 0.7341 S33: -0.6710 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 523 THROUGH 538 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1924 -12.0600 6.8949 REMARK 3 T TENSOR REMARK 3 T11: 0.9216 T22: 1.0260 REMARK 3 T33: 0.8505 T12: -0.0874 REMARK 3 T13: -0.0561 T23: -0.0688 REMARK 3 L TENSOR REMARK 3 L11: 2.9775 L22: 5.1740 REMARK 3 L33: 3.7229 L12: 3.7406 REMARK 3 L13: 3.1529 L23: 4.3107 REMARK 3 S TENSOR REMARK 3 S11: 0.6365 S12: -2.3511 S13: 0.6648 REMARK 3 S21: 1.8641 S22: -0.8012 S23: 0.1414 REMARK 3 S31: -0.0132 S32: -0.7470 S33: 0.5774 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 742 THROUGH 751 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3889 -17.8773 2.1252 REMARK 3 T TENSOR REMARK 3 T11: 0.7710 T22: 1.0620 REMARK 3 T33: 0.8882 T12: -0.2495 REMARK 3 T13: 0.1905 T23: -0.2127 REMARK 3 L TENSOR REMARK 3 L11: 3.5277 L22: 2.8017 REMARK 3 L33: 3.0019 L12: 2.4807 REMARK 3 L13: -2.6281 L23: -0.8030 REMARK 3 S TENSOR REMARK 3 S11: 0.2120 S12: -2.2127 S13: 0.9672 REMARK 3 S21: 1.8347 S22: -0.2118 S23: 1.2541 REMARK 3 S31: 0.4557 S32: -1.8325 S33: -0.0821 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JYD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1000251591. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PHENIX REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21672 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 15.80 REMARK 200 R MERGE (I) : 0.17100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.30 REMARK 200 R MERGE FOR SHELL (I) : 1.16400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5L11 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 M SODIUM/POTASSIUM TARTRATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.44933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.22467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.22467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.44933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 296 REMARK 465 ASN A 297 REMARK 465 ALA A 298 REMARK 465 LYS A 539 REMARK 465 ARG A 540 REMARK 465 ALA A 541 REMARK 465 LYS C 740 REMARK 465 GLU C 741 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 396 -74.54 -80.32 REMARK 500 ASN A 466 66.83 -106.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VQA A 601 DBREF 7JYD A 299 541 UNP O00482 NR5A2_HUMAN 299 541 DBREF 7JYD C 740 751 UNP Q15596 NCOA2_HUMAN 740 751 SEQADV 7JYD SER A 296 UNP O00482 EXPRESSION TAG SEQADV 7JYD ASN A 297 UNP O00482 EXPRESSION TAG SEQADV 7JYD ALA A 298 UNP O00482 EXPRESSION TAG SEQRES 1 A 246 SER ASN ALA ALA SER ILE PRO HIS LEU ILE LEU GLU LEU SEQRES 2 A 246 LEU LYS CYS GLU PRO ASP GLU PRO GLN VAL GLN ALA LYS SEQRES 3 A 246 ILE MET ALA TYR LEU GLN GLN GLU GLN ALA ASN ARG SER SEQRES 4 A 246 LYS HIS GLU LYS LEU SER THR PHE GLY LEU MET CYS LYS SEQRES 5 A 246 MET ALA ASP GLN THR LEU PHE SER ILE VAL GLU TRP ALA SEQRES 6 A 246 ARG SER SER ILE PHE PHE ARG GLU LEU LYS VAL ASP ASP SEQRES 7 A 246 GLN MET LYS LEU LEU GLN ASN CYS TRP SER GLU LEU LEU SEQRES 8 A 246 ILE LEU ASP HIS ILE TYR ARG GLN VAL VAL HIS GLY LYS SEQRES 9 A 246 GLU GLY SER ILE PHE LEU VAL THR GLY GLN GLN VAL ASP SEQRES 10 A 246 TYR SER ILE ILE ALA SER GLN ALA GLY ALA THR LEU ASN SEQRES 11 A 246 ASN LEU MET SER HIS ALA GLN GLU LEU VAL ALA LYS LEU SEQRES 12 A 246 ARG SER LEU GLN PHE ASP GLN ARG GLU PHE VAL CYS LEU SEQRES 13 A 246 LYS PHE LEU VAL LEU PHE SER LEU ASP VAL LYS ASN LEU SEQRES 14 A 246 GLU ASN PHE GLN LEU VAL GLU GLY VAL GLN GLU GLN VAL SEQRES 15 A 246 ASN ALA ALA LEU LEU ASP TYR THR MET CYS ASN TYR PRO SEQRES 16 A 246 GLN GLN THR GLU LYS PHE GLY GLN LEU LEU LEU ARG LEU SEQRES 17 A 246 PRO GLU ILE ARG ALA ILE SER MET GLN ALA GLU GLU TYR SEQRES 18 A 246 LEU TYR TYR LYS HIS LEU ASN GLY ASP VAL PRO TYR ASN SEQRES 19 A 246 ASN LEU LEU ILE GLU MET LEU HIS ALA LYS ARG ALA SEQRES 1 C 12 LYS GLU ASN ALA LEU LEU ARG TYR LEU LEU ASP LYS HET VQA A 601 74 HETNAM VQA 10-[(3AR,6R,6AR)-6-HYDROXY-3-PHENYL-3A-(1- HETNAM 2 VQA PHENYLETHENYL)-1,3A,4,5,6,6A-HEXAHYDROPENTALEN-2- HETNAM 3 VQA YL]DECANOIC ACID FORMUL 3 VQA C32 H40 O3 FORMUL 4 HOH *34(H2 O) HELIX 1 AA1 PRO A 302 LYS A 310 1 9 HELIX 2 AA2 ASP A 314 ASN A 332 1 19 HELIX 3 AA3 SER A 340 ARG A 361 1 22 HELIX 4 AA4 SER A 363 LEU A 369 1 7 HELIX 5 AA5 LYS A 370 GLY A 398 1 29 HELIX 6 AA6 TYR A 413 SER A 418 1 6 HELIX 7 AA7 GLY A 421 LEU A 441 1 21 HELIX 8 AA8 ASP A 444 PHE A 457 1 14 HELIX 9 AA9 ASN A 466 TYR A 489 1 24 HELIX 10 AB1 GLU A 494 ASN A 523 1 30 HELIX 11 AB2 ASN A 529 HIS A 537 1 9 HELIX 12 AB3 ALA C 743 LYS C 751 1 9 SHEET 1 AA1 2 SER A 402 PHE A 404 0 SHEET 2 AA1 2 GLN A 410 ASP A 412 -1 O VAL A 411 N ILE A 403 SITE 1 AC1 13 PHE A 342 MET A 345 ALA A 349 HIS A 390 SITE 2 AC1 13 GLN A 419 ALA A 420 GLY A 421 LEU A 424 SITE 3 AC1 13 MET A 428 TYR A 516 LYS A 520 HOH A 712 SITE 4 AC1 13 HOH A 719 CRYST1 88.370 88.370 105.674 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011316 0.006533 0.000000 0.00000 SCALE2 0.000000 0.013067 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009463 0.00000