HEADER LIPID BINDING PROTEIN 01-SEP-20 7JZ5 TITLE CELLULAR RETINOL-BINDING PROTEIN 2 (CRBP2) IN COMPLEX WITH 1- TITLE 2 ARACHODONOYL-1-THIO-GLYCEROL COMPND MOL_ID: 1; COMPND 2 MOLECULE: RETINOL-BINDING PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CELLULAR RETINOL-BINDING PROTEIN II,CRBP-II; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RBP2, CRBP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: BL21DE KEYWDS PALMITOYLGLYCEROL, MONOACYLGLYCEROL, RETINOL-BINDING PROTEIN, LIPID KEYWDS 2 BINDING, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.A.SILVAROLI,S.BANARJEE,M.GOLCZAK REVDAT 4 18-OCT-23 7JZ5 1 REMARK REVDAT 3 07-APR-21 7JZ5 1 JRNL REVDAT 2 31-MAR-21 7JZ5 1 REMARK REVDAT 1 10-MAR-21 7JZ5 0 JRNL AUTH J.A.SILVAROLI,J.PLAU,C.H.ADAMS,S.BANERJEE, JRNL AUTH 2 M.A.K.WIDJAJA-ADHI,W.S.BLANER,M.GOLCZAK JRNL TITL MOLECULAR BASIS FOR THE INTERACTION OF CELLULAR RETINOL JRNL TITL 2 BINDING PROTEIN 2 (CRBP2) WITH NONRETINOID LIGANDS. JRNL REF J.LIPID RES. V. 62 00054 2021 JRNL REFN ISSN 0022-2275 JRNL PMID 33631211 JRNL DOI 10.1016/J.JLR.2021.100054 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.338 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 49642 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.919 REMARK 3 FREE R VALUE TEST SET COUNT : 2442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.9100 - 4.0291 0.98 2938 155 0.1456 0.1545 REMARK 3 2 4.0291 - 3.1981 0.99 2832 148 0.1420 0.1605 REMARK 3 3 3.1981 - 2.7939 1.00 2787 175 0.1531 0.1568 REMARK 3 4 2.7939 - 2.5384 1.00 2818 139 0.1528 0.1911 REMARK 3 5 2.5384 - 2.3565 1.00 2772 165 0.1575 0.1971 REMARK 3 6 2.3565 - 2.2176 1.00 2791 141 0.1574 0.2104 REMARK 3 7 2.2176 - 2.1065 1.00 2769 162 0.1659 0.1815 REMARK 3 8 2.1065 - 2.0148 1.00 2787 130 0.1726 0.2199 REMARK 3 9 2.0148 - 1.9372 1.00 2756 135 0.1773 0.1836 REMARK 3 10 1.9372 - 1.8704 1.00 2804 126 0.1885 0.2354 REMARK 3 11 1.8704 - 1.8119 1.00 2756 133 0.1832 0.2236 REMARK 3 12 1.8119 - 1.7601 1.00 2757 154 0.1887 0.2271 REMARK 3 13 1.7601 - 1.7138 1.00 2777 134 0.1890 0.2128 REMARK 3 14 1.7138 - 1.6719 1.00 2763 136 0.1972 0.2411 REMARK 3 15 1.6719 - 1.6339 1.00 2744 141 0.2245 0.2491 REMARK 3 16 1.6339 - 1.5992 1.00 2759 129 0.2142 0.2529 REMARK 3 17 1.5992 - 1.5672 0.95 2590 139 0.2292 0.2407 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.153 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.775 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2372 REMARK 3 ANGLE : 1.034 3190 REMARK 3 CHIRALITY : 0.060 341 REMARK 3 PLANARITY : 0.006 416 REMARK 3 DIHEDRAL : 19.677 1434 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : NULL REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESSEQ 2:8 OR RESSEQ 10:16 REMARK 3 OR RESSEQ 18:26 OR (RESID 27 AND (NAME N REMARK 3 OR NAME CA OR NAME CB OR NAME CG OR NAME REMARK 3 CD2 OR NAME H OR NAME HA OR NAME HB2 OR REMARK 3 NAME HB3 OR NAME HD1 OR NAME HD2 OR NAME REMARK 3 HE1 OR NAME HE2 OR NAME HZ )) OR RESSEQ REMARK 3 28:30 OR (RESID 31 AND (NAME N OR NAME CA REMARK 3 OR NAME CB OR NAME CG OR NAME CD OR NAME REMARK 3 CE OR NAME NZ OR NAME H OR NAME HA OR REMARK 3 NAME HB2 OR NAME HB3 OR NAME HG2 OR NAME REMARK 3 HG3 OR NAME HD2 OR NAME HD3 OR NAME HE2 REMARK 3 OR NAME HE3 OR NAME HZ1 OR NAME HZ2 OR REMARK 3 NAME HZ3)) OR RESSEQ 32:34 OR RESSEQ 38: REMARK 3 50 OR RESSEQ 52:75 OR RESSEQ 78:80 OR REMARK 3 RESSEQ 82:97 OR RESSEQ 99 OR RESSEQ 101: REMARK 3 113 OR (RESID 114 AND (NAME N OR NAME CA REMARK 3 OR NAME CB OR NAME CG OR NAME CD OR NAME REMARK 3 CE OR NAME NZ OR NAME H OR NAME HA OR REMARK 3 NAME HB2 OR NAME HB3 OR NAME HG2 OR NAME REMARK 3 HG3 OR NAME HD2 OR NAME HD3 OR NAME HE2 REMARK 3 OR NAME HE3 OR NAME HZ1 OR NAME HZ2 OR REMARK 3 NAME HZ3)) OR RESSEQ 115:117 OR RESSEQ REMARK 3 122:130 OR RESSEQ 132:133)) REMARK 3 SELECTION : (CHAIN B AND (RESSEQ 2:8 OR RESSEQ 10:16 REMARK 3 OR RESSEQ 18:26 OR (RESID 27 AND (NAME N REMARK 3 OR NAME CA OR NAME CB OR NAME CG OR NAME REMARK 3 CD2 OR NAME H OR NAME HA OR NAME HB2 OR REMARK 3 NAME HB3 OR NAME HD1 OR NAME HD2 OR NAME REMARK 3 HE1 OR NAME HE2 OR NAME HZ )) OR RESSEQ REMARK 3 28:30 OR (RESID 31 AND (NAME N OR NAME CA REMARK 3 OR NAME CB OR NAME CG OR NAME CD OR NAME REMARK 3 CE OR NAME NZ OR NAME H OR NAME HA OR REMARK 3 NAME HB2 OR NAME HB3 OR NAME HG2 OR NAME REMARK 3 HG3 OR NAME HD2 OR NAME HD3 OR NAME HE2 REMARK 3 OR NAME HE3 OR NAME HZ1 OR NAME HZ2 OR REMARK 3 NAME HZ3)) OR RESSEQ 32:34 OR RESSEQ 38: REMARK 3 50 OR RESSEQ 52:75 OR RESSEQ 78:80 OR REMARK 3 RESSEQ 82:97 OR RESSEQ 99 OR RESSEQ 101: REMARK 3 113 OR (RESID 114 AND (NAME N OR NAME CA REMARK 3 OR NAME CB OR NAME CG OR NAME CD OR NAME REMARK 3 CE OR NAME NZ OR NAME H OR NAME HA OR REMARK 3 NAME HB2 OR NAME HB3 OR NAME HG2 OR NAME REMARK 3 HG3 OR NAME HD2 OR NAME HD3 OR NAME HE2 REMARK 3 OR NAME HE3 OR NAME HZ1 OR NAME HZ2 OR REMARK 3 NAME HZ3)) OR RESSEQ 115:117 OR RESSEQ REMARK 3 122:130 OR RESSEQ 132:133)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JZ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1000251633. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 - 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49723 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.567 REMARK 200 RESOLUTION RANGE LOW (A) : 89.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.68900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6BTI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS HCL, PEG 3350 22-28%, PH REMARK 280 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.90800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.73850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.78100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.73850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.90800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.78100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 134 REMARK 465 VAL A 135 REMARK 465 PRO A 136 REMARK 465 ARG A 137 REMARK 465 MET B 0 REMARK 465 ARG B 137 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 35 O HOH A 310 1.57 REMARK 500 O HOH B 433 O HOH B 436 1.94 REMARK 500 O HOH B 408 O HOH B 512 2.10 REMARK 500 O HOH B 502 O HOH B 513 2.11 REMARK 500 O HOH A 468 O HOH A 470 2.14 REMARK 500 O HOH A 387 O HOH A 498 2.15 REMARK 500 O HOH A 530 O HOH A 547 2.17 REMARK 500 OE2 GLU A 9 O HOH A 301 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 454 O HOH B 487 4545 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 13 82.63 -156.95 REMARK 500 SER A 76 -9.20 79.73 REMARK 500 LEU A 77 -105.79 -105.12 REMARK 500 LEU A 77 -105.79 -92.10 REMARK 500 ASN B 13 89.73 -156.94 REMARK 500 LEU B 77 -106.68 -97.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VPY A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VPY B 201 DBREF 7JZ5 A 0 133 UNP P50120 RET2_HUMAN 1 134 DBREF 7JZ5 B 0 133 UNP P50120 RET2_HUMAN 1 134 SEQADV 7JZ5 LEU A 134 UNP P50120 EXPRESSION TAG SEQADV 7JZ5 VAL A 135 UNP P50120 EXPRESSION TAG SEQADV 7JZ5 PRO A 136 UNP P50120 EXPRESSION TAG SEQADV 7JZ5 ARG A 137 UNP P50120 EXPRESSION TAG SEQADV 7JZ5 LEU B 134 UNP P50120 EXPRESSION TAG SEQADV 7JZ5 VAL B 135 UNP P50120 EXPRESSION TAG SEQADV 7JZ5 PRO B 136 UNP P50120 EXPRESSION TAG SEQADV 7JZ5 ARG B 137 UNP P50120 EXPRESSION TAG SEQRES 1 A 138 MET THR ARG ASP GLN ASN GLY THR TRP GLU MET GLU SER SEQRES 2 A 138 ASN GLU ASN PHE GLU GLY TYR MET LYS ALA LEU ASP ILE SEQRES 3 A 138 ASP PHE ALA THR ARG LYS ILE ALA VAL ARG LEU THR GLN SEQRES 4 A 138 THR LYS VAL ILE ASP GLN ASP GLY ASP ASN PHE LYS THR SEQRES 5 A 138 LYS THR THR SER THR PHE ARG ASN TYR ASP VAL ASP PHE SEQRES 6 A 138 THR VAL GLY VAL GLU PHE ASP GLU TYR THR LYS SER LEU SEQRES 7 A 138 ASP ASN ARG HIS VAL LYS ALA LEU VAL THR TRP GLU GLY SEQRES 8 A 138 ASP VAL LEU VAL CYS VAL GLN LYS GLY GLU LYS GLU ASN SEQRES 9 A 138 ARG GLY TRP LYS GLN TRP ILE GLU GLY ASP LYS LEU TYR SEQRES 10 A 138 LEU GLU LEU THR CYS GLY ASP GLN VAL CYS ARG GLN VAL SEQRES 11 A 138 PHE LYS LYS LYS LEU VAL PRO ARG SEQRES 1 B 138 MET THR ARG ASP GLN ASN GLY THR TRP GLU MET GLU SER SEQRES 2 B 138 ASN GLU ASN PHE GLU GLY TYR MET LYS ALA LEU ASP ILE SEQRES 3 B 138 ASP PHE ALA THR ARG LYS ILE ALA VAL ARG LEU THR GLN SEQRES 4 B 138 THR LYS VAL ILE ASP GLN ASP GLY ASP ASN PHE LYS THR SEQRES 5 B 138 LYS THR THR SER THR PHE ARG ASN TYR ASP VAL ASP PHE SEQRES 6 B 138 THR VAL GLY VAL GLU PHE ASP GLU TYR THR LYS SER LEU SEQRES 7 B 138 ASP ASN ARG HIS VAL LYS ALA LEU VAL THR TRP GLU GLY SEQRES 8 B 138 ASP VAL LEU VAL CYS VAL GLN LYS GLY GLU LYS GLU ASN SEQRES 9 B 138 ARG GLY TRP LYS GLN TRP ILE GLU GLY ASP LYS LEU TYR SEQRES 10 B 138 LEU GLU LEU THR CYS GLY ASP GLN VAL CYS ARG GLN VAL SEQRES 11 B 138 PHE LYS LYS LYS LEU VAL PRO ARG HET VPY A 201 65 HET VPY B 201 65 HETNAM VPY S-[(2R)-2,3-DIHYDROXYPROPYL] (5Z,8Z,11Z,14Z)-ICOSA-5,8, HETNAM 2 VPY 11,14-TETRAENETHIOATE FORMUL 3 VPY 2(C23 H38 O3 S) FORMUL 5 HOH *502(H2 O) HELIX 1 AA1 ASN A 15 LEU A 23 1 9 HELIX 2 AA2 ASP A 26 VAL A 34 1 9 HELIX 3 AA3 ASN B 15 LEU B 23 1 9 HELIX 4 AA4 ASP B 26 VAL B 34 1 9 SHEET 1 AA110 TYR A 60 THR A 65 0 SHEET 2 AA110 ASN A 48 THR A 54 -1 N PHE A 49 O PHE A 64 SHEET 3 AA110 THR A 39 ASP A 45 -1 N THR A 39 O THR A 54 SHEET 4 AA110 GLY A 6 GLU A 14 -1 N TRP A 8 O LYS A 40 SHEET 5 AA110 GLN A 124 LYS A 132 -1 O VAL A 129 N GLU A 11 SHEET 6 AA110 LYS A 114 CYS A 121 -1 N LEU A 117 O GLN A 128 SHEET 7 AA110 GLY A 105 GLU A 111 -1 N TRP A 109 O TYR A 116 SHEET 8 AA110 VAL A 92 LYS A 98 -1 N CYS A 95 O TRP A 106 SHEET 9 AA110 HIS A 81 GLU A 89 -1 N LYS A 83 O LYS A 98 SHEET 10 AA110 PHE A 70 TYR A 73 -1 N PHE A 70 O ALA A 84 SHEET 1 AA210 TYR B 60 THR B 65 0 SHEET 2 AA210 ASN B 48 THR B 54 -1 N PHE B 49 O PHE B 64 SHEET 3 AA210 THR B 39 ASP B 45 -1 N THR B 39 O THR B 54 SHEET 4 AA210 GLY B 6 GLU B 14 -1 N TRP B 8 O LYS B 40 SHEET 5 AA210 GLN B 124 LYS B 132 -1 O VAL B 129 N GLU B 11 SHEET 6 AA210 LYS B 114 CYS B 121 -1 N LEU B 119 O CYS B 126 SHEET 7 AA210 ARG B 104 GLU B 111 -1 N TRP B 109 O TYR B 116 SHEET 8 AA210 VAL B 92 LYS B 98 -1 N CYS B 95 O TRP B 106 SHEET 9 AA210 HIS B 81 GLU B 89 -1 N THR B 87 O VAL B 94 SHEET 10 AA210 PHE B 70 TYR B 73 -1 N GLU B 72 O VAL B 82 SITE 1 AC1 13 ILE A 25 ALA A 33 LYS A 40 THR A 51 SITE 2 AC1 13 THR A 53 SER A 55 ARG A 58 TYR A 60 SITE 3 AC1 13 VAL A 62 LEU A 77 TRP A 106 GLN A 108 SITE 4 AC1 13 HOH A 376 SITE 1 AC2 12 PHE B 16 MET B 20 ALA B 33 LYS B 40 SITE 2 AC2 12 THR B 51 THR B 53 ARG B 58 TYR B 60 SITE 3 AC2 12 VAL B 62 TRP B 106 GLN B 108 HOH B 364 CRYST1 57.816 67.562 89.477 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017296 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011176 0.00000