HEADER HYDROLASE 03-SEP-20 7K07 TITLE CRYSTAL STRUCTURES AND RIBONUCLEASE ACTIVITY OF THE FLAVIVIRUS HOST TITLE 2 FACTOR ERI3 THAT IS INVOLVED IN VIRAL RNA SYNTHESIS DEFINE THE ERI TITLE 3 SUBFAMILY OF STRUCTURE-SPECIFIC 3-PRIME - 5-PRIME EXORIBONUCLEASES COMPND MOL_ID: 1; COMPND 2 MOLECULE: ERI1 EXORIBONUCLEASE 3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PRION INTERACTOR 1,PRION PROTEIN-INTERACTING PROTEIN; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERI3, PINT1, PRNPIP, PRNPIP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE METAL BINDING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.THAPAR,A.S.ARVAI,J.A.TAINER REVDAT 2 18-OCT-23 7K07 1 REMARK REVDAT 1 06-OCT-21 7K07 0 JRNL AUTH R.THAPAR,A.S.ARVAI,J.A.TAINER JRNL TITL CRYSTAL STRUCTURES AND RIBONUCLEASE ACTIVITY OF THE JRNL TITL 2 FLAVIVIRUS HOST FACTOR ERI3 THAT IS INVOLVED IN VIRAL RNA JRNL TITL 3 SYNTHESIS DEFINE THE ERI SUBFAMILY OF STRUCTURE-SPECIFIC 3'- JRNL TITL 4 5' EXORIBONUCLEASES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 42912 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2135 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.3900 - 5.3000 1.00 2798 152 0.1580 0.1806 REMARK 3 2 5.3000 - 4.2100 1.00 2835 148 0.1387 0.1862 REMARK 3 3 4.2100 - 3.6800 1.00 2819 141 0.1515 0.1649 REMARK 3 4 3.6800 - 3.3400 1.00 2862 147 0.1623 0.1858 REMARK 3 5 3.3400 - 3.1000 1.00 2797 147 0.1828 0.2455 REMARK 3 6 3.1000 - 2.9200 0.99 2809 150 0.2007 0.3198 REMARK 3 7 2.9200 - 2.7700 0.99 2774 149 0.2116 0.2745 REMARK 3 8 2.7700 - 2.6500 0.98 2781 146 0.2091 0.2629 REMARK 3 9 2.6500 - 2.5500 0.97 2735 148 0.2117 0.2487 REMARK 3 10 2.5500 - 2.4600 0.96 2702 146 0.2203 0.2828 REMARK 3 11 2.4600 - 2.3800 0.94 2695 141 0.2185 0.3087 REMARK 3 12 2.3800 - 2.3200 0.92 2595 137 0.2270 0.3016 REMARK 3 13 2.3200 - 2.2600 0.90 2516 128 0.2491 0.2944 REMARK 3 14 2.2500 - 2.2000 0.92 2630 133 0.2471 0.2359 REMARK 3 15 2.2000 - 2.1500 0.86 2429 122 0.2727 0.3493 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.295 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.902 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3362 REMARK 3 ANGLE : 0.742 4564 REMARK 3 CHIRALITY : 0.045 490 REMARK 3 PLANARITY : 0.005 576 REMARK 3 DIHEDRAL : 17.057 1256 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 136 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.7629 28.7022 8.8878 REMARK 3 T TENSOR REMARK 3 T11: 0.3052 T22: 0.2809 REMARK 3 T33: 0.3485 T12: 0.0044 REMARK 3 T13: -0.0166 T23: -0.0538 REMARK 3 L TENSOR REMARK 3 L11: 0.3736 L22: 0.2679 REMARK 3 L33: 0.3617 L12: 0.0892 REMARK 3 L13: -0.0238 L23: -0.3350 REMARK 3 S TENSOR REMARK 3 S11: 0.0459 S12: -0.0081 S13: 0.1508 REMARK 3 S21: 0.1794 S22: 0.1285 S23: -0.1522 REMARK 3 S31: -0.0773 S32: -0.0288 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.4358 17.9881 -2.7564 REMARK 3 T TENSOR REMARK 3 T11: 0.2104 T22: 0.3395 REMARK 3 T33: 0.2774 T12: -0.0132 REMARK 3 T13: -0.0483 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 1.6338 L22: 1.1448 REMARK 3 L33: 1.1333 L12: -0.1405 REMARK 3 L13: 0.2450 L23: -0.1054 REMARK 3 S TENSOR REMARK 3 S11: 0.1494 S12: 0.2393 S13: -0.0798 REMARK 3 S21: -0.1114 S22: -0.0814 S23: 0.0011 REMARK 3 S31: 0.0050 S32: -0.0785 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 272 THROUGH 335 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.0179 22.3294 14.3592 REMARK 3 T TENSOR REMARK 3 T11: 0.3708 T22: 0.3878 REMARK 3 T33: 0.3727 T12: -0.0217 REMARK 3 T13: -0.0846 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 0.4224 L22: 0.0498 REMARK 3 L33: 0.4912 L12: -0.1523 REMARK 3 L13: -0.1822 L23: -0.0179 REMARK 3 S TENSOR REMARK 3 S11: 0.0180 S12: -0.1373 S13: -0.1231 REMARK 3 S21: 0.2538 S22: 0.1006 S23: -0.2074 REMARK 3 S31: 0.0978 S32: 0.1005 S33: -0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 136 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.4620 50.8147 -14.3910 REMARK 3 T TENSOR REMARK 3 T11: 0.7286 T22: 0.1973 REMARK 3 T33: 0.2326 T12: -0.1198 REMARK 3 T13: 0.1782 T23: -0.1001 REMARK 3 L TENSOR REMARK 3 L11: 1.6524 L22: 1.4056 REMARK 3 L33: 1.4224 L12: -0.0857 REMARK 3 L13: 0.0096 L23: -0.6630 REMARK 3 S TENSOR REMARK 3 S11: 0.1678 S12: 0.1755 S13: 0.0906 REMARK 3 S21: 0.2769 S22: 0.4517 S23: 0.6151 REMARK 3 S31: -0.8679 S32: -0.3405 S33: 1.0715 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 175 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.0249 40.4936 -11.8464 REMARK 3 T TENSOR REMARK 3 T11: 0.4904 T22: 0.4223 REMARK 3 T33: 0.4542 T12: -0.0553 REMARK 3 T13: 0.1176 T23: 0.0449 REMARK 3 L TENSOR REMARK 3 L11: 0.1803 L22: 0.5278 REMARK 3 L33: 0.7356 L12: 0.0277 REMARK 3 L13: -0.0305 L23: -0.6224 REMARK 3 S TENSOR REMARK 3 S11: -0.1625 S12: 0.3962 S13: 0.2697 REMARK 3 S21: -0.0010 S22: 0.3722 S23: 0.3597 REMARK 3 S31: -0.3604 S32: -0.0509 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 217 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.3176 51.9661 -4.6077 REMARK 3 T TENSOR REMARK 3 T11: 0.7667 T22: 0.4915 REMARK 3 T33: 0.5433 T12: 0.1198 REMARK 3 T13: 0.3263 T23: 0.0568 REMARK 3 L TENSOR REMARK 3 L11: 0.3098 L22: 0.4239 REMARK 3 L33: 0.6441 L12: -0.1885 REMARK 3 L13: 0.2689 L23: 0.2218 REMARK 3 S TENSOR REMARK 3 S11: 0.4729 S12: -0.3545 S13: 0.5157 REMARK 3 S21: 0.6092 S22: 0.4046 S23: 0.3419 REMARK 3 S31: -0.9696 S32: -0.2601 S33: 0.8364 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 231 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.3319 58.3612 -12.2131 REMARK 3 T TENSOR REMARK 3 T11: 0.9692 T22: 0.3168 REMARK 3 T33: 0.6124 T12: -0.0485 REMARK 3 T13: 0.3406 T23: 0.0825 REMARK 3 L TENSOR REMARK 3 L11: 1.8170 L22: 0.2761 REMARK 3 L33: 0.1768 L12: -0.4459 REMARK 3 L13: 0.4782 L23: -0.2228 REMARK 3 S TENSOR REMARK 3 S11: 0.5115 S12: 0.1821 S13: 0.6452 REMARK 3 S21: 0.5184 S22: 0.0939 S23: 0.4200 REMARK 3 S31: -0.7409 S32: -0.0931 S33: 0.7340 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 253 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.5201 54.9253 -16.8788 REMARK 3 T TENSOR REMARK 3 T11: 0.7093 T22: 0.6954 REMARK 3 T33: 0.7833 T12: 0.1020 REMARK 3 T13: 0.1805 T23: 0.2461 REMARK 3 L TENSOR REMARK 3 L11: 0.1473 L22: 0.0244 REMARK 3 L33: 0.3572 L12: -0.0181 REMARK 3 L13: 0.2072 L23: -0.0369 REMARK 3 S TENSOR REMARK 3 S11: 0.3348 S12: -0.0146 S13: 0.1314 REMARK 3 S21: -0.0060 S22: 0.5395 S23: 0.3725 REMARK 3 S31: -0.1864 S32: -0.9426 S33: 0.0383 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 272 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.6071 57.4434 -21.9172 REMARK 3 T TENSOR REMARK 3 T11: 0.5495 T22: 0.3375 REMARK 3 T33: 0.3087 T12: -0.0831 REMARK 3 T13: 0.1189 T23: 0.0994 REMARK 3 L TENSOR REMARK 3 L11: 1.3172 L22: 0.3656 REMARK 3 L33: 1.1178 L12: 0.4766 REMARK 3 L13: 0.9877 L23: 0.6041 REMARK 3 S TENSOR REMARK 3 S11: 0.4321 S12: 0.3862 S13: -0.0806 REMARK 3 S21: 0.4913 S22: 0.1216 S23: 0.1212 REMARK 3 S31: -0.6120 S32: 0.4074 S33: 0.1455 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 284 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.6410 48.4561 -24.4096 REMARK 3 T TENSOR REMARK 3 T11: 0.4262 T22: 0.4409 REMARK 3 T33: 0.3896 T12: -0.0264 REMARK 3 T13: 0.0259 T23: 0.0972 REMARK 3 L TENSOR REMARK 3 L11: 0.0201 L22: 0.0192 REMARK 3 L33: 0.0459 L12: -0.0267 REMARK 3 L13: -0.0190 L23: 0.0114 REMARK 3 S TENSOR REMARK 3 S11: -0.0002 S12: 0.0836 S13: 0.0476 REMARK 3 S21: -0.1158 S22: -0.1042 S23: 0.2535 REMARK 3 S31: 0.1122 S32: 0.2904 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 299 THROUGH 335 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.8029 50.8875 -14.8663 REMARK 3 T TENSOR REMARK 3 T11: 0.5344 T22: 0.4093 REMARK 3 T33: 0.2945 T12: -0.1728 REMARK 3 T13: 0.0219 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 1.4627 L22: 0.9920 REMARK 3 L33: 0.2800 L12: -0.6217 REMARK 3 L13: -0.1818 L23: 0.0588 REMARK 3 S TENSOR REMARK 3 S11: 0.2562 S12: -0.1249 S13: -0.1453 REMARK 3 S21: 0.7149 S22: -0.1508 S23: 0.1800 REMARK 3 S31: -0.6160 S32: 0.5938 S33: 0.1032 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7K07 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1000248738. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.005 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44601 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 37.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 39.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2XRI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% MPEG 2K, 20% SATURATED KCL, 200 MM REMARK 280 PH 8.0 IMIDAZOLE MALATE, 5MM MNCL2, 20MM AMP, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.31350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.36250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.38850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.36250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.31350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.38850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 HIS A 125 REMARK 465 HIS A 126 REMARK 465 HIS A 127 REMARK 465 HIS A 128 REMARK 465 GLU A 129 REMARK 465 ASN A 130 REMARK 465 LEU A 131 REMARK 465 TYR A 132 REMARK 465 PHE A 133 REMARK 465 GLN A 134 REMARK 465 SER A 135 REMARK 465 PRO A 336 REMARK 465 PHE A 337 REMARK 465 MET B 122 REMARK 465 HIS B 123 REMARK 465 HIS B 124 REMARK 465 HIS B 125 REMARK 465 HIS B 126 REMARK 465 HIS B 127 REMARK 465 HIS B 128 REMARK 465 GLU B 129 REMARK 465 ASN B 130 REMARK 465 LEU B 131 REMARK 465 TYR B 132 REMARK 465 PHE B 133 REMARK 465 GLN B 134 REMARK 465 SER B 135 REMARK 465 PRO B 336 REMARK 465 PHE B 337 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 179 O HOH B 601 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 289 73.30 -116.53 REMARK 500 PHE B 138 70.10 57.03 REMARK 500 ARG B 176 -61.98 -168.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 150 OD2 REMARK 620 2 GLU A 152 OE2 93.3 REMARK 620 3 ASP A 312 OD2 93.0 112.2 REMARK 620 4 AMP A 501 O2P 103.2 122.6 121.1 REMARK 620 5 HOH A 621 O 166.4 77.5 99.8 74.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 503 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 150 OD1 REMARK 620 2 AMP A 501 O1P 162.6 REMARK 620 3 AMP A 501 O2P 100.6 62.1 REMARK 620 4 HOH A 602 O 94.6 102.6 164.3 REMARK 620 5 HOH A 630 O 87.8 91.6 93.0 83.4 REMARK 620 6 HOH A 673 O 80.0 96.4 77.5 109.4 162.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 150 OD2 REMARK 620 2 GLU B 152 OE2 92.4 REMARK 620 3 ASP B 312 OD2 93.8 128.9 REMARK 620 4 AMP B 501 O3P 102.8 106.8 121.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 503 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 150 OD1 REMARK 620 2 AMP B 501 O1P 158.4 REMARK 620 3 AMP B 501 O3P 98.7 63.9 REMARK 620 4 HOH B 602 O 93.7 99.1 91.6 REMARK 620 5 HOH B 606 O 95.3 103.1 165.7 84.4 REMARK 620 6 HOH B 648 O 78.1 89.1 91.0 171.7 94.8 REMARK 620 N 1 2 3 4 5 DBREF 7K07 A 137 337 UNP O43414 ERI3_HUMAN 137 337 DBREF 7K07 B 137 337 UNP O43414 ERI3_HUMAN 137 337 SEQADV 7K07 MET A 122 UNP O43414 INITIATING METHIONINE SEQADV 7K07 HIS A 123 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS A 124 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS A 125 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS A 126 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS A 127 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS A 128 UNP O43414 EXPRESSION TAG SEQADV 7K07 GLU A 129 UNP O43414 EXPRESSION TAG SEQADV 7K07 ASN A 130 UNP O43414 EXPRESSION TAG SEQADV 7K07 LEU A 131 UNP O43414 EXPRESSION TAG SEQADV 7K07 TYR A 132 UNP O43414 EXPRESSION TAG SEQADV 7K07 PHE A 133 UNP O43414 EXPRESSION TAG SEQADV 7K07 GLN A 134 UNP O43414 EXPRESSION TAG SEQADV 7K07 SER A 135 UNP O43414 EXPRESSION TAG SEQADV 7K07 MET A 136 UNP O43414 EXPRESSION TAG SEQADV 7K07 MET B 122 UNP O43414 INITIATING METHIONINE SEQADV 7K07 HIS B 123 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS B 124 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS B 125 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS B 126 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS B 127 UNP O43414 EXPRESSION TAG SEQADV 7K07 HIS B 128 UNP O43414 EXPRESSION TAG SEQADV 7K07 GLU B 129 UNP O43414 EXPRESSION TAG SEQADV 7K07 ASN B 130 UNP O43414 EXPRESSION TAG SEQADV 7K07 LEU B 131 UNP O43414 EXPRESSION TAG SEQADV 7K07 TYR B 132 UNP O43414 EXPRESSION TAG SEQADV 7K07 PHE B 133 UNP O43414 EXPRESSION TAG SEQADV 7K07 GLN B 134 UNP O43414 EXPRESSION TAG SEQADV 7K07 SER B 135 UNP O43414 EXPRESSION TAG SEQADV 7K07 MET B 136 UNP O43414 EXPRESSION TAG SEQRES 1 A 216 MET HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SEQRES 2 A 216 SER MET SER PHE PRO PRO GLN ARG TYR HIS TYR PHE LEU SEQRES 3 A 216 VAL LEU ASP PHE GLU ALA THR CYS ASP LYS PRO GLN ILE SEQRES 4 A 216 HIS PRO GLN GLU ILE ILE GLU PHE PRO ILE LEU LYS LEU SEQRES 5 A 216 ASN GLY ARG THR MET GLU ILE GLU SER THR PHE HIS MET SEQRES 6 A 216 TYR VAL GLN PRO VAL VAL HIS PRO GLN LEU THR PRO PHE SEQRES 7 A 216 CYS THR GLU LEU THR GLY ILE ILE GLN ALA MET VAL ASP SEQRES 8 A 216 GLY GLN PRO SER LEU GLN GLN VAL LEU GLU ARG VAL ASP SEQRES 9 A 216 GLU TRP MET ALA LYS GLU GLY LEU LEU ASP PRO ASN VAL SEQRES 10 A 216 LYS SER ILE PHE VAL THR CYS GLY ASP TRP ASP LEU LYS SEQRES 11 A 216 VAL MET LEU PRO GLY GLN CYS GLN TYR LEU GLY LEU PRO SEQRES 12 A 216 VAL ALA ASP TYR PHE LYS GLN TRP ILE ASN LEU LYS LYS SEQRES 13 A 216 ALA TYR SER PHE ALA MET GLY CYS TRP PRO LYS ASN GLY SEQRES 14 A 216 LEU LEU ASP MET ASN LYS GLY LEU SER LEU GLN HIS ILE SEQRES 15 A 216 GLY ARG PRO HIS SER GLY ILE ASP ASP CYS LYS ASN ILE SEQRES 16 A 216 ALA ASN ILE MET LYS THR LEU ALA TYR ARG GLY PHE ILE SEQRES 17 A 216 PHE LYS GLN THR SER LYS PRO PHE SEQRES 1 B 216 MET HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SEQRES 2 B 216 SER MET SER PHE PRO PRO GLN ARG TYR HIS TYR PHE LEU SEQRES 3 B 216 VAL LEU ASP PHE GLU ALA THR CYS ASP LYS PRO GLN ILE SEQRES 4 B 216 HIS PRO GLN GLU ILE ILE GLU PHE PRO ILE LEU LYS LEU SEQRES 5 B 216 ASN GLY ARG THR MET GLU ILE GLU SER THR PHE HIS MET SEQRES 6 B 216 TYR VAL GLN PRO VAL VAL HIS PRO GLN LEU THR PRO PHE SEQRES 7 B 216 CYS THR GLU LEU THR GLY ILE ILE GLN ALA MET VAL ASP SEQRES 8 B 216 GLY GLN PRO SER LEU GLN GLN VAL LEU GLU ARG VAL ASP SEQRES 9 B 216 GLU TRP MET ALA LYS GLU GLY LEU LEU ASP PRO ASN VAL SEQRES 10 B 216 LYS SER ILE PHE VAL THR CYS GLY ASP TRP ASP LEU LYS SEQRES 11 B 216 VAL MET LEU PRO GLY GLN CYS GLN TYR LEU GLY LEU PRO SEQRES 12 B 216 VAL ALA ASP TYR PHE LYS GLN TRP ILE ASN LEU LYS LYS SEQRES 13 B 216 ALA TYR SER PHE ALA MET GLY CYS TRP PRO LYS ASN GLY SEQRES 14 B 216 LEU LEU ASP MET ASN LYS GLY LEU SER LEU GLN HIS ILE SEQRES 15 B 216 GLY ARG PRO HIS SER GLY ILE ASP ASP CYS LYS ASN ILE SEQRES 16 B 216 ALA ASN ILE MET LYS THR LEU ALA TYR ARG GLY PHE ILE SEQRES 17 B 216 PHE LYS GLN THR SER LYS PRO PHE HET AMP A 501 23 HET MN A 502 1 HET MN A 503 1 HET AMP B 501 23 HET MN B 502 1 HET MN B 503 1 HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM MN MANGANESE (II) ION FORMUL 3 AMP 2(C10 H14 N5 O7 P) FORMUL 4 MN 4(MN 2+) FORMUL 9 HOH *163(H2 O) HELIX 1 AA1 THR A 197 GLY A 205 1 9 HELIX 2 AA2 ILE A 207 ASP A 212 1 6 HELIX 3 AA3 SER A 216 GLY A 232 1 17 HELIX 4 AA4 ASP A 247 VAL A 252 1 6 HELIX 5 AA5 VAL A 252 GLY A 262 1 11 HELIX 6 AA6 ALA A 266 LYS A 270 5 5 HELIX 7 AA7 LEU A 275 GLY A 284 1 10 HELIX 8 AA8 ASN A 289 LEU A 298 1 10 HELIX 9 AA9 SER A 308 ARG A 326 1 19 HELIX 10 AB1 THR B 197 GLY B 205 1 9 HELIX 11 AB2 ILE B 207 ASP B 212 1 6 HELIX 12 AB3 SER B 216 GLU B 231 1 16 HELIX 13 AB4 ASP B 247 VAL B 252 1 6 HELIX 14 AB5 VAL B 252 GLY B 262 1 11 HELIX 15 AB6 ALA B 266 LYS B 270 5 5 HELIX 16 AB7 LEU B 275 GLY B 284 1 10 HELIX 17 AB8 ASN B 289 SER B 299 1 11 HELIX 18 AB9 SER B 308 ARG B 326 1 19 SHEET 1 AA1 3 GLU A 152 ALA A 153 0 SHEET 2 AA1 3 ILE A 165 ASN A 174 -1 O ILE A 166 N GLU A 152 SHEET 3 AA1 3 ILE A 180 TYR A 187 -1 O PHE A 184 N ILE A 170 SHEET 1 AA2 5 GLU A 152 ALA A 153 0 SHEET 2 AA2 5 ILE A 165 ASN A 174 -1 O ILE A 166 N GLU A 152 SHEET 3 AA2 5 TYR A 145 LEU A 149 -1 N PHE A 146 O LEU A 173 SHEET 4 AA2 5 SER A 240 THR A 244 1 O VAL A 243 N LEU A 147 SHEET 5 AA2 5 TRP A 272 ASN A 274 1 O ILE A 273 N THR A 244 SHEET 1 AA3 3 GLU B 152 ALA B 153 0 SHEET 2 AA3 3 ILE B 165 ASN B 174 -1 O ILE B 166 N GLU B 152 SHEET 3 AA3 3 ILE B 180 TYR B 187 -1 O SER B 182 N LYS B 172 SHEET 1 AA4 5 GLU B 152 ALA B 153 0 SHEET 2 AA4 5 ILE B 165 ASN B 174 -1 O ILE B 166 N GLU B 152 SHEET 3 AA4 5 TYR B 145 LEU B 149 -1 N PHE B 146 O LEU B 173 SHEET 4 AA4 5 SER B 240 THR B 244 1 O VAL B 243 N LEU B 147 SHEET 5 AA4 5 TRP B 272 ASN B 274 1 O ILE B 273 N THR B 244 SSBOND 1 CYS A 285 CYS B 285 1555 2765 2.04 LINK OD2 ASP A 150 MN MN A 502 1555 1555 2.15 LINK OD1 ASP A 150 MN MN A 503 1555 1555 2.17 LINK OE2 GLU A 152 MN MN A 502 1555 1555 2.09 LINK OD2 ASP A 312 MN MN A 502 1555 1555 2.00 LINK O2P AMP A 501 MN MN A 502 1555 1555 2.01 LINK O1P AMP A 501 MN MN A 503 1555 1555 2.55 LINK O2P AMP A 501 MN MN A 503 1555 1555 2.30 LINK MN MN A 502 O HOH A 621 1555 1555 2.30 LINK MN MN A 503 O HOH A 602 1555 1555 2.21 LINK MN MN A 503 O HOH A 630 1555 1555 2.20 LINK MN MN A 503 O HOH A 673 1555 1555 2.50 LINK OD2 ASP B 150 MN MN B 502 1555 1555 2.18 LINK OD1 ASP B 150 MN MN B 503 1555 1555 2.23 LINK OE2 GLU B 152 MN MN B 502 1555 1555 2.06 LINK OD2 ASP B 312 MN MN B 502 1555 1555 2.11 LINK O3P AMP B 501 MN MN B 502 1555 1555 1.95 LINK O1P AMP B 501 MN MN B 503 1555 1555 2.32 LINK O3P AMP B 501 MN MN B 503 1555 1555 2.49 LINK MN MN B 503 O HOH B 602 1555 1555 2.24 LINK MN MN B 503 O HOH B 606 1555 1555 2.05 LINK MN MN B 503 O HOH B 648 1555 1555 2.47 CISPEP 1 LYS A 157 PRO A 158 0 -3.62 CISPEP 2 HIS A 161 PRO A 162 0 -6.72 CISPEP 3 LYS B 157 PRO B 158 0 3.18 CISPEP 4 HIS B 161 PRO B 162 0 -6.97 CRYST1 58.627 74.777 96.725 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017057 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013373 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010339 0.00000