HEADER TRANSCRIPTION 07-SEP-20 7K1A TITLE TTGR QUADRUPLE MUTANT (C137I I141W M167L F168Y) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TOLUENE EFFLUX PUMP TTGABC OPERON REPRESSOR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 1196325; SOURCE 4 STRAIN: DOT-T1E; SOURCE 5 GENE: TTGR, T1E_0244; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS TTGR, TETR FAMILY, EPISTASIS, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.A.BINGMAN,K.K.NISHIKAWA,R.W.SMITH,S.RAMAN REVDAT 2 18-OCT-23 7K1A 1 REMARK REVDAT 1 06-OCT-21 7K1A 0 JRNL AUTH K.K.NISHIKAWA,N.HOPPE,R.SMITH,C.BINGMAN,S.RAMAN JRNL TITL EPISTASIS SHAPES THE FITNESS LANDSCAPE OF AN ALLOSTERIC JRNL TITL 2 SPECIFICITY SWITCH. JRNL REF NAT COMMUN V. 12 5562 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34548494 JRNL DOI 10.1038/S41467-021-25826-7 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 42566 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.650 REMARK 3 FREE R VALUE TEST SET COUNT : 1979 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1400 - 4.2100 0.99 3033 182 0.1821 0.2183 REMARK 3 2 4.2100 - 3.3500 1.00 2991 115 0.1791 0.2310 REMARK 3 3 3.3500 - 2.9200 1.00 2969 99 0.1977 0.2464 REMARK 3 4 2.9200 - 2.6600 1.00 2876 198 0.1947 0.2406 REMARK 3 5 2.6600 - 2.4700 1.00 2960 99 0.1977 0.2502 REMARK 3 6 2.4700 - 2.3200 1.00 2825 198 0.1915 0.2224 REMARK 3 7 2.3200 - 2.2000 1.00 2920 99 0.1924 0.2420 REMARK 3 8 2.2000 - 2.1100 1.00 2857 198 0.1997 0.2443 REMARK 3 9 2.1100 - 2.0300 1.00 2919 99 0.2138 0.2518 REMARK 3 10 2.0300 - 1.9600 1.00 2888 99 0.2195 0.2912 REMARK 3 11 1.9600 - 1.9000 1.00 2794 198 0.2310 0.2706 REMARK 3 12 1.9000 - 1.8400 1.00 2961 99 0.2788 0.3720 REMARK 3 13 1.8400 - 1.7900 1.00 2763 198 0.3393 0.3806 REMARK 3 14 1.7900 - 1.7500 0.97 2831 98 0.4152 0.3885 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.273 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.108 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3375 REMARK 3 ANGLE : 0.478 4570 REMARK 3 CHIRALITY : 0.032 519 REMARK 3 PLANARITY : 0.002 598 REMARK 3 DIHEDRAL : 20.358 1268 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0711 -2.1928 43.9121 REMARK 3 T TENSOR REMARK 3 T11: 0.3803 T22: 0.3330 REMARK 3 T33: 0.3849 T12: 0.0522 REMARK 3 T13: -0.0192 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 2.4121 L22: 3.2323 REMARK 3 L33: 3.9839 L12: 0.3496 REMARK 3 L13: 1.7776 L23: 0.8823 REMARK 3 S TENSOR REMARK 3 S11: -0.0009 S12: -0.0498 S13: 0.0566 REMARK 3 S21: 0.2084 S22: 0.1394 S23: -0.3879 REMARK 3 S31: -0.0159 S32: 0.3774 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5783 -3.7078 22.5394 REMARK 3 T TENSOR REMARK 3 T11: 0.3186 T22: 0.3706 REMARK 3 T33: 0.2753 T12: 0.0089 REMARK 3 T13: -0.0275 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 2.2135 L22: 0.9987 REMARK 3 L33: 1.2073 L12: -0.4309 REMARK 3 L13: -0.2791 L23: -0.2474 REMARK 3 S TENSOR REMARK 3 S11: 0.0876 S12: -0.0049 S13: -0.0216 REMARK 3 S21: 0.0750 S22: 0.0596 S23: -0.1134 REMARK 3 S31: -0.0311 S32: 0.6043 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6429 8.8981 19.6791 REMARK 3 T TENSOR REMARK 3 T11: 0.2341 T22: 0.2347 REMARK 3 T33: 0.2960 T12: -0.0522 REMARK 3 T13: -0.0156 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 2.9800 L22: 2.3735 REMARK 3 L33: 0.7503 L12: -0.4748 REMARK 3 L13: 0.2537 L23: -0.6392 REMARK 3 S TENSOR REMARK 3 S11: -0.0938 S12: -0.1430 S13: 0.2171 REMARK 3 S21: 0.0910 S22: 0.1090 S23: -0.0925 REMARK 3 S31: -0.5402 S32: 0.8224 S33: 0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.7676 -2.8831 15.9030 REMARK 3 T TENSOR REMARK 3 T11: 0.2417 T22: 0.2167 REMARK 3 T33: 0.2439 T12: -0.0031 REMARK 3 T13: -0.0247 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 2.7453 L22: 1.5690 REMARK 3 L33: 2.8883 L12: 0.5943 REMARK 3 L13: -0.2137 L23: -0.2684 REMARK 3 S TENSOR REMARK 3 S11: -0.0798 S12: 0.2844 S13: -0.0957 REMARK 3 S21: -0.1614 S22: 0.1776 S23: 0.1783 REMARK 3 S31: 0.0976 S32: -0.1467 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 6 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.5674 11.7399 44.5968 REMARK 3 T TENSOR REMARK 3 T11: 0.3935 T22: 0.3642 REMARK 3 T33: 0.3588 T12: 0.0612 REMARK 3 T13: 0.0668 T23: 0.0532 REMARK 3 L TENSOR REMARK 3 L11: 0.5913 L22: 1.4715 REMARK 3 L33: 1.4429 L12: 0.2007 REMARK 3 L13: -0.1857 L23: 1.0496 REMARK 3 S TENSOR REMARK 3 S11: 0.3855 S12: -0.0727 S13: 0.5367 REMARK 3 S21: -0.0049 S22: -0.0489 S23: 0.1870 REMARK 3 S31: -0.1587 S32: -0.1937 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 29 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.9773 8.9576 50.2017 REMARK 3 T TENSOR REMARK 3 T11: 0.3204 T22: 0.3635 REMARK 3 T33: 0.3055 T12: 0.0562 REMARK 3 T13: 0.0237 T23: -0.0362 REMARK 3 L TENSOR REMARK 3 L11: 1.9581 L22: 0.5218 REMARK 3 L33: 1.4717 L12: -0.6209 REMARK 3 L13: -1.3259 L23: -0.0131 REMARK 3 S TENSOR REMARK 3 S11: 0.3128 S12: -1.5438 S13: 0.4672 REMARK 3 S21: 0.4443 S22: 0.1083 S23: -0.3683 REMARK 3 S31: -0.8221 S32: 1.1755 S33: 0.0580 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.5243 3.7151 46.4147 REMARK 3 T TENSOR REMARK 3 T11: 0.3524 T22: 0.3297 REMARK 3 T33: 0.4034 T12: 0.0389 REMARK 3 T13: 0.0325 T23: 0.0479 REMARK 3 L TENSOR REMARK 3 L11: 0.7474 L22: 1.7161 REMARK 3 L33: 1.1663 L12: 1.0229 REMARK 3 L13: -0.1987 L23: -0.3627 REMARK 3 S TENSOR REMARK 3 S11: -0.0393 S12: 0.1514 S13: -0.1489 REMARK 3 S21: -0.0041 S22: -0.0358 S23: 0.0395 REMARK 3 S31: 0.4200 S32: -0.7071 S33: -0.0009 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.5386 4.8685 17.8637 REMARK 3 T TENSOR REMARK 3 T11: 0.2909 T22: 0.4217 REMARK 3 T33: 0.4388 T12: -0.0411 REMARK 3 T13: -0.0424 T23: 0.0959 REMARK 3 L TENSOR REMARK 3 L11: 1.0187 L22: 1.3836 REMARK 3 L33: 1.1369 L12: -0.1983 REMARK 3 L13: 0.4482 L23: 0.3721 REMARK 3 S TENSOR REMARK 3 S11: 0.0204 S12: -0.1570 S13: 0.1355 REMARK 3 S21: 0.1813 S22: -0.0296 S23: 0.6841 REMARK 3 S31: 0.1963 S32: -0.6158 S33: -0.0010 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.7133 10.2540 33.1044 REMARK 3 T TENSOR REMARK 3 T11: 0.3200 T22: 0.3137 REMARK 3 T33: 0.3877 T12: 0.0702 REMARK 3 T13: 0.0117 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.3889 L22: 0.8602 REMARK 3 L33: 0.7919 L12: 0.4804 REMARK 3 L13: 0.3657 L23: 0.0719 REMARK 3 S TENSOR REMARK 3 S11: 0.1246 S12: -0.2094 S13: 0.1176 REMARK 3 S21: 0.1091 S22: 0.0666 S23: 0.3693 REMARK 3 S31: -0.3157 S32: 0.0480 S33: 0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 117 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.8732 -3.1320 42.2832 REMARK 3 T TENSOR REMARK 3 T11: 0.4392 T22: 0.5628 REMARK 3 T33: 0.5809 T12: -0.0085 REMARK 3 T13: 0.0413 T23: 0.1174 REMARK 3 L TENSOR REMARK 3 L11: 1.4212 L22: 2.0813 REMARK 3 L33: 1.1396 L12: -0.8938 REMARK 3 L13: 0.9431 L23: 0.2013 REMARK 3 S TENSOR REMARK 3 S11: -0.3883 S12: -1.9396 S13: -0.6242 REMARK 3 S21: 1.3590 S22: 0.6714 S23: 1.3337 REMARK 3 S31: 0.1109 S32: -1.4043 S33: 0.0134 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 126 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.3593 -6.7264 19.5311 REMARK 3 T TENSOR REMARK 3 T11: 0.3031 T22: 0.2457 REMARK 3 T33: 0.4116 T12: -0.0603 REMARK 3 T13: -0.0019 T23: 0.0813 REMARK 3 L TENSOR REMARK 3 L11: 1.8141 L22: 2.3956 REMARK 3 L33: 1.0111 L12: 0.0461 REMARK 3 L13: 0.0466 L23: 0.2667 REMARK 3 S TENSOR REMARK 3 S11: -0.0854 S12: -0.1785 S13: -0.0427 REMARK 3 S21: 0.0190 S22: 0.0482 S23: 0.4522 REMARK 3 S31: 0.6933 S32: -0.3507 S33: -0.0003 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.7732 1.5694 21.0113 REMARK 3 T TENSOR REMARK 3 T11: 0.2782 T22: 0.2768 REMARK 3 T33: 0.2537 T12: 0.0562 REMARK 3 T13: -0.0323 T23: 0.0465 REMARK 3 L TENSOR REMARK 3 L11: 1.2247 L22: 0.9597 REMARK 3 L33: 2.0716 L12: -0.7076 REMARK 3 L13: -0.6270 L23: -0.4813 REMARK 3 S TENSOR REMARK 3 S11: -0.0625 S12: 0.0911 S13: -0.0152 REMARK 3 S21: 0.3096 S22: 0.2555 S23: 0.1337 REMARK 3 S31: 0.2718 S32: -0.0085 S33: 0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 182 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.0221 16.2167 19.9639 REMARK 3 T TENSOR REMARK 3 T11: 0.3874 T22: 0.3369 REMARK 3 T33: 0.3977 T12: -0.0005 REMARK 3 T13: -0.1248 T23: 0.0851 REMARK 3 L TENSOR REMARK 3 L11: 0.0500 L22: 0.0173 REMARK 3 L33: 0.1299 L12: -0.0429 REMARK 3 L13: 0.1013 L23: -0.0655 REMARK 3 S TENSOR REMARK 3 S11: -0.6940 S12: 0.4349 S13: 0.6653 REMARK 3 S21: 0.3886 S22: -0.1938 S23: 0.2441 REMARK 3 S31: -0.9669 S32: 0.2192 S33: -0.0001 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 192 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.6676 1.7195 8.9421 REMARK 3 T TENSOR REMARK 3 T11: 0.3699 T22: 0.3279 REMARK 3 T33: 0.2693 T12: -0.0440 REMARK 3 T13: -0.0461 T23: 0.0746 REMARK 3 L TENSOR REMARK 3 L11: 1.5158 L22: 0.3602 REMARK 3 L33: 1.7049 L12: -0.7612 REMARK 3 L13: -0.2083 L23: 0.4174 REMARK 3 S TENSOR REMARK 3 S11: -0.1029 S12: 0.3066 S13: 0.0548 REMARK 3 S21: -0.3276 S22: 0.2475 S23: 0.0620 REMARK 3 S31: 0.0780 S32: -0.0917 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7K1A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1000251723. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978560 REMARK 200 MONOCHROMATOR : DIAMOND 111 REMARK 200 OPTICS : 3.0G UNDULATOR, DIAMOND (111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42585 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 32.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.09432 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 10.10 REMARK 200 R MERGE FOR SHELL (I) : 1.30300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2UXU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 NL OF PROTEIN AT 9.7 MG/ML IN 5MM REMARK 280 HEPES PH 7.5, 50 MM NACL, 0.3 MM TCEP WAS EQUILIBRATED AGAINST REMARK 280 150 NL 20% MEPEG, 0.2M MGCL2, 0.1M BISTRIS HCL PH 6.5 IN A SD2 REMARK 280 PLATE USING A MOSQUITO CRYSTALLIZATION ROBOT. SAMPLES WERE REMARK 280 CRYOPROTECTED WITH RESERVOIR SOLUTION SUPPLEMENTED TO 35% MEPEG REMARK 280 2000. SAMPLES LOOPED IN MITEGEN MICRO MOUNTS WERE FLASH COOLED REMARK 280 BY IMMERSION IN LIQUID NITROGEN, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 111.93500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 111.93500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.96000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.14000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 28.96000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.14000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 111.93500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.96000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 32.14000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 111.93500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 28.96000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 32.14000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 MET A 2 REMARK 465 VAL A 3 REMARK 465 ARG A 4 REMARK 465 ARG A 5 REMARK 465 SER B 1 REMARK 465 MET B 2 REMARK 465 VAL B 3 REMARK 465 ARG B 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 544 O HOH B 545 2.01 REMARK 500 O HOH A 460 O HOH A 494 2.16 REMARK 500 OE2 GLU A 19 NH1 ARG A 23 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 124 56.95 -117.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 70 OG1 REMARK 620 2 GLU A 100 OE2 92.0 REMARK 620 3 HOH A 401 O 92.3 172.1 REMARK 620 4 HOH A 414 O 93.0 83.1 90.0 REMARK 620 5 HOH A 434 O 175.7 85.7 89.6 83.2 REMARK 620 6 HOH A 491 O 91.2 91.6 94.9 173.4 92.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 70 OG1 REMARK 620 2 GLU B 100 OE2 84.2 REMARK 620 3 HOH B 410 O 89.8 86.4 REMARK 620 4 HOH B 439 O 82.1 166.0 90.4 REMARK 620 5 HOH B 456 O 176.2 97.0 93.9 96.8 REMARK 620 6 HOH B 474 O 86.1 94.2 175.7 88.0 90.2 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7KD8 RELATED DB: PDB REMARK 900 RELATED ID: 7K1C RELATED DB: PDB DBREF 7K1A A 2 211 UNP Q9AIU0 TTGR_PSEPT 1 210 DBREF 7K1A B 2 211 UNP Q9AIU0 TTGR_PSEPT 1 210 SEQADV 7K1A SER A 1 UNP Q9AIU0 EXPRESSION TAG SEQADV 7K1A ILE A 138 UNP Q9AIU0 CYS 137 ENGINEERED MUTATION SEQADV 7K1A TRP A 142 UNP Q9AIU0 ILE 141 ENGINEERED MUTATION SEQADV 7K1A LEU A 168 UNP Q9AIU0 MET 167 ENGINEERED MUTATION SEQADV 7K1A TYR A 169 UNP Q9AIU0 PHE 168 ENGINEERED MUTATION SEQADV 7K1A SER B 1 UNP Q9AIU0 EXPRESSION TAG SEQADV 7K1A ILE B 138 UNP Q9AIU0 CYS 137 ENGINEERED MUTATION SEQADV 7K1A TRP B 142 UNP Q9AIU0 ILE 141 ENGINEERED MUTATION SEQADV 7K1A LEU B 168 UNP Q9AIU0 MET 167 ENGINEERED MUTATION SEQADV 7K1A TYR B 169 UNP Q9AIU0 PHE 168 ENGINEERED MUTATION SEQRES 1 A 211 SER MET VAL ARG ARG THR LYS GLU GLU ALA GLN GLU THR SEQRES 2 A 211 ARG ALA GLN ILE ILE GLU ALA ALA GLU ARG ALA PHE TYR SEQRES 3 A 211 LYS ARG GLY VAL ALA ARG THR THR LEU ALA ASP ILE ALA SEQRES 4 A 211 GLU LEU ALA GLY VAL THR ARG GLY ALA ILE TYR TRP HIS SEQRES 5 A 211 PHE ASN ASN LYS ALA GLU LEU VAL GLN ALA LEU LEU ASP SEQRES 6 A 211 SER LEU HIS GLU THR HIS ASP HIS LEU ALA ARG ALA SER SEQRES 7 A 211 GLU SER GLU ASP GLU VAL ASP PRO LEU GLY CYS MET ARG SEQRES 8 A 211 LYS LEU LEU LEU GLN VAL PHE ASN GLU LEU VAL LEU ASP SEQRES 9 A 211 ALA ARG THR ARG ARG ILE ASN GLU ILE LEU HIS HIS LYS SEQRES 10 A 211 CYS GLU PHE THR ASP ASP MET CYS GLU ILE ARG GLN GLN SEQRES 11 A 211 ARG GLN SER ALA VAL LEU ASP ILE HIS LYS GLY TRP THR SEQRES 12 A 211 LEU ALA LEU ALA ASN ALA VAL ARG ARG GLY GLN LEU PRO SEQRES 13 A 211 GLY GLU LEU ASP ALA GLU ARG ALA ALA VAL ALA LEU TYR SEQRES 14 A 211 ALA TYR VAL ASP GLY LEU ILE ARG ARG TRP LEU LEU LEU SEQRES 15 A 211 PRO ASP SER VAL ASP LEU LEU GLY ASP VAL GLU LYS TRP SEQRES 16 A 211 VAL ASP THR GLY LEU ASP MET LEU ARG LEU SER PRO ALA SEQRES 17 A 211 LEU ARG LYS SEQRES 1 B 211 SER MET VAL ARG ARG THR LYS GLU GLU ALA GLN GLU THR SEQRES 2 B 211 ARG ALA GLN ILE ILE GLU ALA ALA GLU ARG ALA PHE TYR SEQRES 3 B 211 LYS ARG GLY VAL ALA ARG THR THR LEU ALA ASP ILE ALA SEQRES 4 B 211 GLU LEU ALA GLY VAL THR ARG GLY ALA ILE TYR TRP HIS SEQRES 5 B 211 PHE ASN ASN LYS ALA GLU LEU VAL GLN ALA LEU LEU ASP SEQRES 6 B 211 SER LEU HIS GLU THR HIS ASP HIS LEU ALA ARG ALA SER SEQRES 7 B 211 GLU SER GLU ASP GLU VAL ASP PRO LEU GLY CYS MET ARG SEQRES 8 B 211 LYS LEU LEU LEU GLN VAL PHE ASN GLU LEU VAL LEU ASP SEQRES 9 B 211 ALA ARG THR ARG ARG ILE ASN GLU ILE LEU HIS HIS LYS SEQRES 10 B 211 CYS GLU PHE THR ASP ASP MET CYS GLU ILE ARG GLN GLN SEQRES 11 B 211 ARG GLN SER ALA VAL LEU ASP ILE HIS LYS GLY TRP THR SEQRES 12 B 211 LEU ALA LEU ALA ASN ALA VAL ARG ARG GLY GLN LEU PRO SEQRES 13 B 211 GLY GLU LEU ASP ALA GLU ARG ALA ALA VAL ALA LEU TYR SEQRES 14 B 211 ALA TYR VAL ASP GLY LEU ILE ARG ARG TRP LEU LEU LEU SEQRES 15 B 211 PRO ASP SER VAL ASP LEU LEU GLY ASP VAL GLU LYS TRP SEQRES 16 B 211 VAL ASP THR GLY LEU ASP MET LEU ARG LEU SER PRO ALA SEQRES 17 B 211 LEU ARG LYS HET MG A 301 1 HET MG B 301 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *279(H2 O) HELIX 1 AA1 THR A 6 GLY A 29 1 24 HELIX 2 AA2 THR A 34 GLY A 43 1 10 HELIX 3 AA3 GLY A 47 PHE A 53 1 7 HELIX 4 AA4 ASN A 55 HIS A 68 1 14 HELIX 5 AA5 HIS A 71 SER A 80 1 10 HELIX 6 AA6 ASP A 85 ASP A 104 1 20 HELIX 7 AA7 ASP A 104 LYS A 117 1 14 HELIX 8 AA8 THR A 121 MET A 124 5 4 HELIX 9 AA9 CYS A 125 ARG A 152 1 28 HELIX 10 AB1 ASP A 160 LEU A 182 1 23 HELIX 11 AB2 PRO A 183 VAL A 186 5 4 HELIX 12 AB3 ASP A 191 SER A 206 1 16 HELIX 13 AB4 PRO A 207 ARG A 210 5 4 HELIX 14 AB5 THR B 6 GLY B 29 1 24 HELIX 15 AB6 THR B 34 GLY B 43 1 10 HELIX 16 AB7 THR B 45 PHE B 53 1 9 HELIX 17 AB8 ASN B 55 SER B 66 1 12 HELIX 18 AB9 LEU B 67 THR B 70 5 4 HELIX 19 AC1 HIS B 71 SER B 80 1 10 HELIX 20 AC2 ASP B 85 ASP B 104 1 20 HELIX 21 AC3 ASP B 104 LYS B 117 1 14 HELIX 22 AC4 THR B 121 MET B 124 5 4 HELIX 23 AC5 CYS B 125 ARG B 152 1 28 HELIX 24 AC6 ASP B 160 LEU B 182 1 23 HELIX 25 AC7 PRO B 183 VAL B 186 5 4 HELIX 26 AC8 ASP B 191 SER B 206 1 16 HELIX 27 AC9 PRO B 207 ARG B 210 5 4 LINK OG1 THR A 70 MG MG A 301 1555 1555 2.13 LINK OE2 GLU A 100 MG MG A 301 1555 1555 2.19 LINK MG MG A 301 O HOH A 401 1555 1555 2.23 LINK MG MG A 301 O HOH A 414 1555 1555 2.12 LINK MG MG A 301 O HOH A 434 1555 1555 2.19 LINK MG MG A 301 O HOH A 491 1555 1555 2.14 LINK OG1 THR B 70 MG MG B 301 1555 1555 2.22 LINK OE2 GLU B 100 MG MG B 301 1555 1555 2.18 LINK MG MG B 301 O HOH B 410 1555 1555 1.97 LINK MG MG B 301 O HOH B 439 1555 1555 2.05 LINK MG MG B 301 O HOH B 456 1555 1555 2.12 LINK MG MG B 301 O HOH B 474 1555 1555 1.97 CRYST1 57.920 64.280 223.870 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017265 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015557 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004467 0.00000