data_7K9D # _entry.id 7K9D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7K9D pdb_00007k9d 10.2210/pdb7k9d/pdb WWPDB D_1000252114 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-03-03 2 'Structure model' 1 1 2021-03-10 3 'Structure model' 1 2 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.pdbx_database_id_DOI' 3 2 'Structure model' '_citation.pdbx_database_id_PubMed' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation_author.identifier_ORCID' 6 3 'Structure model' '_database_2.pdbx_DOI' 7 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7K9D _pdbx_database_status.recvd_initial_deposition_date 2020-09-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Entry from the same paper' 7K9B unspecified PDB 'Entry from the same paper' 7K9C unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yang, Y.' 1 0000-0001-9061-3828 'Breaker, R.R.' 2 0000-0002-2165-536X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 118 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Structure of a bacterial OapB protein with its OLE RNA target gives insights into the architecture of the OLE ribonucleoprotein complex. ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2020393118 _citation.pdbx_database_id_PubMed 33619097 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, Y.' 1 ? primary 'Harris, K.A.' 2 ? primary 'Widner, D.L.' 3 ? primary 'Breaker, R.R.' 4 0000-0003-3028-5863 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'OLE-associated protein B' 11378.141 1 ? ? ? ? 2 polymer syn 'OLE* RNA' 19465.389 1 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 4 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 5 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 6 ? ? ? ? 6 water nat water 18.015 240 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name OapB # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPSPEIGQIVKIVKGRDRDQFSVIIKRVDDRFVYIADGDKRKVDRAKRKNMNHLKLIDHISPEVRHSFEETGKVTNGKLR FALKKFLEEHADLLKEGE ; ;GPSPEIGQIVKIVKGRDRDQFSVIIKRVDDRFVYIADGDKRKVDRAKRKNMNHLKLIDHISPEVRHSFEETGKVTNGKLR FALKKFLEEHADLLKEGE ; A ? 2 polyribonucleotide no yes '(GTP)GCCAGUCUGGCGUUUGGUGACAGCGCCAAGUUCUUCGGAAUUGGGAAAUCCUACUGGCC' GGCCAGUCUGGCGUUUGGUGACAGCGCCAAGUUCUUCGGAAUUGGGAAAUCCUACUGGCC B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 5 'COBALT HEXAMMINE(III)' NCO 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 SER n 1 4 PRO n 1 5 GLU n 1 6 ILE n 1 7 GLY n 1 8 GLN n 1 9 ILE n 1 10 VAL n 1 11 LYS n 1 12 ILE n 1 13 VAL n 1 14 LYS n 1 15 GLY n 1 16 ARG n 1 17 ASP n 1 18 ARG n 1 19 ASP n 1 20 GLN n 1 21 PHE n 1 22 SER n 1 23 VAL n 1 24 ILE n 1 25 ILE n 1 26 LYS n 1 27 ARG n 1 28 VAL n 1 29 ASP n 1 30 ASP n 1 31 ARG n 1 32 PHE n 1 33 VAL n 1 34 TYR n 1 35 ILE n 1 36 ALA n 1 37 ASP n 1 38 GLY n 1 39 ASP n 1 40 LYS n 1 41 ARG n 1 42 LYS n 1 43 VAL n 1 44 ASP n 1 45 ARG n 1 46 ALA n 1 47 LYS n 1 48 ARG n 1 49 LYS n 1 50 ASN n 1 51 MET n 1 52 ASN n 1 53 HIS n 1 54 LEU n 1 55 LYS n 1 56 LEU n 1 57 ILE n 1 58 ASP n 1 59 HIS n 1 60 ILE n 1 61 SER n 1 62 PRO n 1 63 GLU n 1 64 VAL n 1 65 ARG n 1 66 HIS n 1 67 SER n 1 68 PHE n 1 69 GLU n 1 70 GLU n 1 71 THR n 1 72 GLY n 1 73 LYS n 1 74 VAL n 1 75 THR n 1 76 ASN n 1 77 GLY n 1 78 LYS n 1 79 LEU n 1 80 ARG n 1 81 PHE n 1 82 ALA n 1 83 LEU n 1 84 LYS n 1 85 LYS n 1 86 PHE n 1 87 LEU n 1 88 GLU n 1 89 GLU n 1 90 HIS n 1 91 ALA n 1 92 ASP n 1 93 LEU n 1 94 LEU n 1 95 LYS n 1 96 GLU n 1 97 GLY n 1 98 GLU n 2 1 GTP n 2 2 G n 2 3 C n 2 4 C n 2 5 A n 2 6 G n 2 7 U n 2 8 C n 2 9 U n 2 10 G n 2 11 G n 2 12 C n 2 13 G n 2 14 U n 2 15 U n 2 16 U n 2 17 G n 2 18 G n 2 19 U n 2 20 G n 2 21 A n 2 22 C n 2 23 A n 2 24 G n 2 25 C n 2 26 G n 2 27 C n 2 28 C n 2 29 A n 2 30 A n 2 31 G n 2 32 U n 2 33 U n 2 34 C n 2 35 U n 2 36 U n 2 37 C n 2 38 G n 2 39 G n 2 40 A n 2 41 A n 2 42 U n 2 43 U n 2 44 G n 2 45 G n 2 46 G n 2 47 A n 2 48 A n 2 49 A n 2 50 U n 2 51 C n 2 52 C n 2 53 U n 2 54 A n 2 55 C n 2 56 U n 2 57 G n 2 58 G n 2 59 C n 2 60 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 98 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BH0157 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272558 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 60 _pdbx_entity_src_syn.organism_scientific 'Bacillus halodurans C-125' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 272558 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 5 ? ? ? A . n A 1 2 PRO 2 6 6 PRO PRO A . n A 1 3 SER 3 7 7 SER SER A . n A 1 4 PRO 4 8 8 PRO PRO A . n A 1 5 GLU 5 9 9 GLU GLU A . n A 1 6 ILE 6 10 10 ILE ILE A . n A 1 7 GLY 7 11 11 GLY GLY A . n A 1 8 GLN 8 12 12 GLN GLN A . n A 1 9 ILE 9 13 13 ILE ILE A . n A 1 10 VAL 10 14 14 VAL VAL A . n A 1 11 LYS 11 15 15 LYS LYS A . n A 1 12 ILE 12 16 16 ILE ILE A . n A 1 13 VAL 13 17 17 VAL VAL A . n A 1 14 LYS 14 18 18 LYS LYS A . n A 1 15 GLY 15 19 19 GLY GLY A . n A 1 16 ARG 16 20 20 ARG ARG A . n A 1 17 ASP 17 21 21 ASP ASP A . n A 1 18 ARG 18 22 22 ARG ARG A . n A 1 19 ASP 19 23 23 ASP ASP A . n A 1 20 GLN 20 24 24 GLN GLN A . n A 1 21 PHE 21 25 25 PHE PHE A . n A 1 22 SER 22 26 26 SER SER A . n A 1 23 VAL 23 27 27 VAL VAL A . n A 1 24 ILE 24 28 28 ILE ILE A . n A 1 25 ILE 25 29 29 ILE ILE A . n A 1 26 LYS 26 30 30 LYS LYS A . n A 1 27 ARG 27 31 31 ARG ARG A . n A 1 28 VAL 28 32 32 VAL VAL A . n A 1 29 ASP 29 33 33 ASP ASP A . n A 1 30 ASP 30 34 34 ASP ASP A . n A 1 31 ARG 31 35 35 ARG ARG A . n A 1 32 PHE 32 36 36 PHE PHE A . n A 1 33 VAL 33 37 37 VAL VAL A . n A 1 34 TYR 34 38 38 TYR TYR A . n A 1 35 ILE 35 39 39 ILE ILE A . n A 1 36 ALA 36 40 40 ALA ALA A . n A 1 37 ASP 37 41 41 ASP ASP A . n A 1 38 GLY 38 42 42 GLY GLY A . n A 1 39 ASP 39 43 43 ASP ASP A . n A 1 40 LYS 40 44 44 LYS LYS A . n A 1 41 ARG 41 45 45 ARG ARG A . n A 1 42 LYS 42 46 46 LYS LYS A . n A 1 43 VAL 43 47 47 VAL VAL A . n A 1 44 ASP 44 48 48 ASP ASP A . n A 1 45 ARG 45 49 49 ARG ARG A . n A 1 46 ALA 46 50 50 ALA ALA A . n A 1 47 LYS 47 51 51 LYS LYS A . n A 1 48 ARG 48 52 52 ARG ARG A . n A 1 49 LYS 49 53 53 LYS LYS A . n A 1 50 ASN 50 54 54 ASN ASN A . n A 1 51 MET 51 55 55 MET MET A . n A 1 52 ASN 52 56 56 ASN ASN A . n A 1 53 HIS 53 57 57 HIS HIS A . n A 1 54 LEU 54 58 58 LEU LEU A . n A 1 55 LYS 55 59 59 LYS LYS A . n A 1 56 LEU 56 60 60 LEU LEU A . n A 1 57 ILE 57 61 61 ILE ILE A . n A 1 58 ASP 58 62 62 ASP ASP A . n A 1 59 HIS 59 63 63 HIS HIS A . n A 1 60 ILE 60 64 64 ILE ILE A . n A 1 61 SER 61 65 65 SER SER A . n A 1 62 PRO 62 66 66 PRO PRO A . n A 1 63 GLU 63 67 67 GLU GLU A . n A 1 64 VAL 64 68 68 VAL VAL A . n A 1 65 ARG 65 69 69 ARG ARG A . n A 1 66 HIS 66 70 70 HIS HIS A . n A 1 67 SER 67 71 71 SER SER A . n A 1 68 PHE 68 72 72 PHE PHE A . n A 1 69 GLU 69 73 73 GLU GLU A . n A 1 70 GLU 70 74 74 GLU GLU A . n A 1 71 THR 71 75 75 THR THR A . n A 1 72 GLY 72 76 76 GLY GLY A . n A 1 73 LYS 73 77 77 LYS LYS A . n A 1 74 VAL 74 78 78 VAL VAL A . n A 1 75 THR 75 79 79 THR THR A . n A 1 76 ASN 76 80 80 ASN ASN A . n A 1 77 GLY 77 81 81 GLY GLY A . n A 1 78 LYS 78 82 82 LYS LYS A . n A 1 79 LEU 79 83 83 LEU LEU A . n A 1 80 ARG 80 84 84 ARG ARG A . n A 1 81 PHE 81 85 85 PHE PHE A . n A 1 82 ALA 82 86 86 ALA ALA A . n A 1 83 LEU 83 87 87 LEU LEU A . n A 1 84 LYS 84 88 88 LYS LYS A . n A 1 85 LYS 85 89 89 LYS LYS A . n A 1 86 PHE 86 90 90 PHE PHE A . n A 1 87 LEU 87 91 91 LEU LEU A . n A 1 88 GLU 88 92 92 GLU GLU A . n A 1 89 GLU 89 93 93 GLU GLU A . n A 1 90 HIS 90 94 94 HIS HIS A . n A 1 91 ALA 91 95 ? ? ? A . n A 1 92 ASP 92 96 ? ? ? A . n A 1 93 LEU 93 97 ? ? ? A . n A 1 94 LEU 94 98 ? ? ? A . n A 1 95 LYS 95 99 ? ? ? A . n A 1 96 GLU 96 100 ? ? ? A . n A 1 97 GLY 97 101 ? ? ? A . n A 1 98 GLU 98 102 ? ? ? A . n B 2 1 GTP 1 484 484 GTP GTP B . n B 2 2 G 2 485 485 G G B . n B 2 3 C 3 486 486 C C B . n B 2 4 C 4 487 487 C C B . n B 2 5 A 5 488 488 A A B . n B 2 6 G 6 489 489 G G B . n B 2 7 U 7 490 490 U U B . n B 2 8 C 8 491 491 C C B . n B 2 9 U 9 492 492 U U B . n B 2 10 G 10 493 493 G G B . n B 2 11 G 11 494 494 G G B . n B 2 12 C 12 495 495 C C B . n B 2 13 G 13 496 496 G G B . n B 2 14 U 14 497 497 U U B . n B 2 15 U 15 498 498 U U B . n B 2 16 U 16 499 499 U U B . n B 2 17 G 17 500 500 G G B . n B 2 18 G 18 501 501 G G B . n B 2 19 U 19 502 502 U U B . n B 2 20 G 20 503 503 G G B . n B 2 21 A 21 504 504 A A B . n B 2 22 C 22 505 505 C C B . n B 2 23 A 23 506 506 A A B . n B 2 24 G 24 507 507 G G B . n B 2 25 C 25 508 508 C C B . n B 2 26 G 26 509 509 G G B . n B 2 27 C 27 510 510 C C B . n B 2 28 C 28 511 511 C C B . n B 2 29 A 29 512 512 A A B . n B 2 30 A 30 513 513 A A B . n B 2 31 G 31 514 514 G G B . n B 2 32 U 32 515 515 U U B . n B 2 33 U 33 516 516 U U B . n B 2 34 C 34 517 517 C C B . n B 2 35 U 35 518 518 U U B . n B 2 36 U 36 519 519 U U B . n B 2 37 C 37 520 520 C C B . n B 2 38 G 38 521 521 G G B . n B 2 39 G 39 522 522 G G B . n B 2 40 A 40 523 523 A A B . n B 2 41 A 41 524 524 A A B . n B 2 42 U 42 525 525 U U B . n B 2 43 U 43 526 526 U U B . n B 2 44 G 44 527 527 G G B . n B 2 45 G 45 528 528 G G B . n B 2 46 G 46 529 529 G G B . n B 2 47 A 47 530 530 A A B . n B 2 48 A 48 531 531 A A B . n B 2 49 A 49 532 532 A A B . n B 2 50 U 50 533 533 U U B . n B 2 51 C 51 534 534 C C B . n B 2 52 C 52 535 535 C C B . n B 2 53 U 53 536 536 U U B . n B 2 54 A 54 537 537 A A B . n B 2 55 C 55 538 538 C C B . n B 2 56 U 56 539 539 U U B . n B 2 57 G 57 540 540 G G B . n B 2 58 G 58 541 541 G G B . n B 2 59 C 59 542 542 C C B . n B 2 60 C 60 543 543 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MPD 1 201 8 MPD MPD A . D 4 EPE 1 601 1 EPE EPE B . E 5 NCO 1 602 2 NCO NCO B . F 5 NCO 1 603 3 NCO NCO B . G 5 NCO 1 604 4 NCO NCO B . H 5 NCO 1 605 5 NCO NCO B . I 5 NCO 1 606 6 NCO NCO B . J 5 NCO 1 607 7 NCO NCO B . K 6 HOH 1 301 181 HOH HOH A . K 6 HOH 2 302 146 HOH HOH A . K 6 HOH 3 303 60 HOH HOH A . K 6 HOH 4 304 189 HOH HOH A . K 6 HOH 5 305 158 HOH HOH A . K 6 HOH 6 306 164 HOH HOH A . K 6 HOH 7 307 65 HOH HOH A . K 6 HOH 8 308 67 HOH HOH A . K 6 HOH 9 309 147 HOH HOH A . K 6 HOH 10 310 123 HOH HOH A . K 6 HOH 11 311 129 HOH HOH A . K 6 HOH 12 312 172 HOH HOH A . K 6 HOH 13 313 197 HOH HOH A . K 6 HOH 14 314 216 HOH HOH A . K 6 HOH 15 315 198 HOH HOH A . K 6 HOH 16 316 57 HOH HOH A . K 6 HOH 17 317 168 HOH HOH A . K 6 HOH 18 318 127 HOH HOH A . K 6 HOH 19 319 23 HOH HOH A . K 6 HOH 20 320 47 HOH HOH A . K 6 HOH 21 321 167 HOH HOH A . K 6 HOH 22 322 66 HOH HOH A . K 6 HOH 23 323 38 HOH HOH A . K 6 HOH 24 324 155 HOH HOH A . K 6 HOH 25 325 15 HOH HOH A . K 6 HOH 26 326 217 HOH HOH A . K 6 HOH 27 327 215 HOH HOH A . K 6 HOH 28 328 3 HOH HOH A . K 6 HOH 29 329 7 HOH HOH A . K 6 HOH 30 330 70 HOH HOH A . K 6 HOH 31 331 125 HOH HOH A . K 6 HOH 32 332 163 HOH HOH A . K 6 HOH 33 333 12 HOH HOH A . K 6 HOH 34 334 124 HOH HOH A . K 6 HOH 35 335 173 HOH HOH A . K 6 HOH 36 336 145 HOH HOH A . K 6 HOH 37 337 130 HOH HOH A . K 6 HOH 38 338 56 HOH HOH A . K 6 HOH 39 339 214 HOH HOH A . K 6 HOH 40 340 190 HOH HOH A . K 6 HOH 41 341 233 HOH HOH A . K 6 HOH 42 342 227 HOH HOH A . K 6 HOH 43 343 58 HOH HOH A . K 6 HOH 44 344 42 HOH HOH A . K 6 HOH 45 345 30 HOH HOH A . K 6 HOH 46 346 166 HOH HOH A . K 6 HOH 47 347 221 HOH HOH A . K 6 HOH 48 348 61 HOH HOH A . K 6 HOH 49 349 149 HOH HOH A . K 6 HOH 50 350 126 HOH HOH A . K 6 HOH 51 351 226 HOH HOH A . K 6 HOH 52 352 128 HOH HOH A . K 6 HOH 53 353 196 HOH HOH A . K 6 HOH 54 354 148 HOH HOH A . L 6 HOH 1 701 11 HOH HOH B . L 6 HOH 2 702 224 HOH HOH B . L 6 HOH 3 703 74 HOH HOH B . L 6 HOH 4 704 102 HOH HOH B . L 6 HOH 5 705 229 HOH HOH B . L 6 HOH 6 706 144 HOH HOH B . L 6 HOH 7 707 195 HOH HOH B . L 6 HOH 8 708 69 HOH HOH B . L 6 HOH 9 709 157 HOH HOH B . L 6 HOH 10 710 151 HOH HOH B . L 6 HOH 11 711 45 HOH HOH B . L 6 HOH 12 712 184 HOH HOH B . L 6 HOH 13 713 111 HOH HOH B . L 6 HOH 14 714 8 HOH HOH B . L 6 HOH 15 715 134 HOH HOH B . L 6 HOH 16 716 131 HOH HOH B . L 6 HOH 17 717 219 HOH HOH B . L 6 HOH 18 718 43 HOH HOH B . L 6 HOH 19 719 113 HOH HOH B . L 6 HOH 20 720 32 HOH HOH B . L 6 HOH 21 721 141 HOH HOH B . L 6 HOH 22 722 174 HOH HOH B . L 6 HOH 23 723 41 HOH HOH B . L 6 HOH 24 724 6 HOH HOH B . L 6 HOH 25 725 37 HOH HOH B . L 6 HOH 26 726 135 HOH HOH B . L 6 HOH 27 727 103 HOH HOH B . L 6 HOH 28 728 132 HOH HOH B . L 6 HOH 29 729 119 HOH HOH B . L 6 HOH 30 730 207 HOH HOH B . L 6 HOH 31 731 211 HOH HOH B . L 6 HOH 32 732 154 HOH HOH B . L 6 HOH 33 733 33 HOH HOH B . L 6 HOH 34 734 122 HOH HOH B . L 6 HOH 35 735 4 HOH HOH B . L 6 HOH 36 736 159 HOH HOH B . L 6 HOH 37 737 16 HOH HOH B . L 6 HOH 38 738 212 HOH HOH B . L 6 HOH 39 739 44 HOH HOH B . L 6 HOH 40 740 31 HOH HOH B . L 6 HOH 41 741 160 HOH HOH B . L 6 HOH 42 742 40 HOH HOH B . L 6 HOH 43 743 25 HOH HOH B . L 6 HOH 44 744 39 HOH HOH B . L 6 HOH 45 745 161 HOH HOH B . L 6 HOH 46 746 48 HOH HOH B . L 6 HOH 47 747 218 HOH HOH B . L 6 HOH 48 748 169 HOH HOH B . L 6 HOH 49 749 63 HOH HOH B . L 6 HOH 50 750 13 HOH HOH B . L 6 HOH 51 751 52 HOH HOH B . L 6 HOH 52 752 220 HOH HOH B . L 6 HOH 53 753 210 HOH HOH B . L 6 HOH 54 754 34 HOH HOH B . L 6 HOH 55 755 92 HOH HOH B . L 6 HOH 56 756 54 HOH HOH B . L 6 HOH 57 757 86 HOH HOH B . L 6 HOH 58 758 116 HOH HOH B . L 6 HOH 59 759 9 HOH HOH B . L 6 HOH 60 760 22 HOH HOH B . L 6 HOH 61 761 29 HOH HOH B . L 6 HOH 62 762 14 HOH HOH B . L 6 HOH 63 763 180 HOH HOH B . L 6 HOH 64 764 94 HOH HOH B . L 6 HOH 65 765 235 HOH HOH B . L 6 HOH 66 766 143 HOH HOH B . L 6 HOH 67 767 82 HOH HOH B . L 6 HOH 68 768 21 HOH HOH B . L 6 HOH 69 769 230 HOH HOH B . L 6 HOH 70 770 79 HOH HOH B . L 6 HOH 71 771 80 HOH HOH B . L 6 HOH 72 772 46 HOH HOH B . L 6 HOH 73 773 1 HOH HOH B . L 6 HOH 74 774 28 HOH HOH B . L 6 HOH 75 775 99 HOH HOH B . L 6 HOH 76 776 186 HOH HOH B . L 6 HOH 77 777 202 HOH HOH B . L 6 HOH 78 778 78 HOH HOH B . L 6 HOH 79 779 87 HOH HOH B . L 6 HOH 80 780 101 HOH HOH B . L 6 HOH 81 781 201 HOH HOH B . L 6 HOH 82 782 112 HOH HOH B . L 6 HOH 83 783 153 HOH HOH B . L 6 HOH 84 784 142 HOH HOH B . L 6 HOH 85 785 240 HOH HOH B . L 6 HOH 86 786 137 HOH HOH B . L 6 HOH 87 787 2 HOH HOH B . L 6 HOH 88 788 50 HOH HOH B . L 6 HOH 89 789 114 HOH HOH B . L 6 HOH 90 790 118 HOH HOH B . L 6 HOH 91 791 152 HOH HOH B . L 6 HOH 92 792 107 HOH HOH B . L 6 HOH 93 793 10 HOH HOH B . L 6 HOH 94 794 193 HOH HOH B . L 6 HOH 95 795 53 HOH HOH B . L 6 HOH 96 796 19 HOH HOH B . L 6 HOH 97 797 104 HOH HOH B . L 6 HOH 98 798 237 HOH HOH B . L 6 HOH 99 799 100 HOH HOH B . L 6 HOH 100 800 170 HOH HOH B . L 6 HOH 101 801 239 HOH HOH B . L 6 HOH 102 802 108 HOH HOH B . L 6 HOH 103 803 136 HOH HOH B . L 6 HOH 104 804 84 HOH HOH B . L 6 HOH 105 805 179 HOH HOH B . L 6 HOH 106 806 121 HOH HOH B . L 6 HOH 107 807 192 HOH HOH B . L 6 HOH 108 808 83 HOH HOH B . L 6 HOH 109 809 27 HOH HOH B . L 6 HOH 110 810 97 HOH HOH B . L 6 HOH 111 811 106 HOH HOH B . L 6 HOH 112 812 228 HOH HOH B . L 6 HOH 113 813 89 HOH HOH B . L 6 HOH 114 814 223 HOH HOH B . L 6 HOH 115 815 225 HOH HOH B . L 6 HOH 116 816 187 HOH HOH B . L 6 HOH 117 817 110 HOH HOH B . L 6 HOH 118 818 88 HOH HOH B . L 6 HOH 119 819 64 HOH HOH B . L 6 HOH 120 820 24 HOH HOH B . L 6 HOH 121 821 165 HOH HOH B . L 6 HOH 122 822 162 HOH HOH B . L 6 HOH 123 823 140 HOH HOH B . L 6 HOH 124 824 20 HOH HOH B . L 6 HOH 125 825 182 HOH HOH B . L 6 HOH 126 826 93 HOH HOH B . L 6 HOH 127 827 68 HOH HOH B . L 6 HOH 128 828 178 HOH HOH B . L 6 HOH 129 829 232 HOH HOH B . L 6 HOH 130 830 176 HOH HOH B . L 6 HOH 131 831 213 HOH HOH B . L 6 HOH 132 832 17 HOH HOH B . L 6 HOH 133 833 91 HOH HOH B . L 6 HOH 134 834 75 HOH HOH B . L 6 HOH 135 835 62 HOH HOH B . L 6 HOH 136 836 59 HOH HOH B . L 6 HOH 137 837 95 HOH HOH B . L 6 HOH 138 838 85 HOH HOH B . L 6 HOH 139 839 156 HOH HOH B . L 6 HOH 140 840 199 HOH HOH B . L 6 HOH 141 841 76 HOH HOH B . L 6 HOH 142 842 209 HOH HOH B . L 6 HOH 143 843 71 HOH HOH B . L 6 HOH 144 844 238 HOH HOH B . L 6 HOH 145 845 133 HOH HOH B . L 6 HOH 146 846 117 HOH HOH B . L 6 HOH 147 847 175 HOH HOH B . L 6 HOH 148 848 139 HOH HOH B . L 6 HOH 149 849 188 HOH HOH B . L 6 HOH 150 850 77 HOH HOH B . L 6 HOH 151 851 191 HOH HOH B . L 6 HOH 152 852 73 HOH HOH B . L 6 HOH 153 853 236 HOH HOH B . L 6 HOH 154 854 205 HOH HOH B . L 6 HOH 155 855 194 HOH HOH B . L 6 HOH 156 856 5 HOH HOH B . L 6 HOH 157 857 18 HOH HOH B . L 6 HOH 158 858 26 HOH HOH B . L 6 HOH 159 859 105 HOH HOH B . L 6 HOH 160 860 222 HOH HOH B . L 6 HOH 161 861 120 HOH HOH B . L 6 HOH 162 862 150 HOH HOH B . L 6 HOH 163 863 204 HOH HOH B . L 6 HOH 164 864 81 HOH HOH B . L 6 HOH 165 865 206 HOH HOH B . L 6 HOH 166 866 231 HOH HOH B . L 6 HOH 167 867 35 HOH HOH B . L 6 HOH 168 868 55 HOH HOH B . L 6 HOH 169 869 36 HOH HOH B . L 6 HOH 170 870 96 HOH HOH B . L 6 HOH 171 871 72 HOH HOH B . L 6 HOH 172 872 109 HOH HOH B . L 6 HOH 173 873 138 HOH HOH B . L 6 HOH 174 874 51 HOH HOH B . L 6 HOH 175 875 183 HOH HOH B . L 6 HOH 176 876 49 HOH HOH B . L 6 HOH 177 877 115 HOH HOH B . L 6 HOH 178 878 208 HOH HOH B . L 6 HOH 179 879 98 HOH HOH B . L 6 HOH 180 880 177 HOH HOH B . L 6 HOH 181 881 234 HOH HOH B . L 6 HOH 182 882 185 HOH HOH B . L 6 HOH 183 883 200 HOH HOH B . L 6 HOH 184 884 90 HOH HOH B . L 6 HOH 185 885 171 HOH HOH B . L 6 HOH 186 886 203 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.16_3549 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7K9D _cell.details ? _cell.formula_units_Z ? _cell.length_a 98.817 _cell.length_a_esd ? _cell.length_b 98.817 _cell.length_b_esd ? _cell.length_c 198.897 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7K9D _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7K9D _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.03 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM HEPES (pH 7.0 to 7.5), 200 mM NH4Cl and 39 to 42.5% 2-Methyl-2,4-pentanediol (MPD)' _exptl_crystal_grow.pdbx_pH_range '7.0 - 7.5' # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-07-31 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.6058 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.6058 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7K9D _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.0980 _reflns.d_resolution_low 41.84 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 42266 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.8 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.053 _reflns.pdbx_Rpim_I_all 0.017 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.0980 _reflns_shell.d_res_low 2.18 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.7 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2175 _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.211 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 9.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.280 _reflns_shell.pdbx_Rpim_I_all 0.411 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.816 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 184.120 _refine.B_iso_mean 72.8179 _refine.B_iso_min 42.800 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7K9D _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0980 _refine.ls_d_res_low 41.8320 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 42266 _refine.ls_number_reflns_R_free 1143 _refine.ls_number_reflns_R_work 40075 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6300 _refine.ls_percent_reflns_R_free 5.1800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1636 _refine.ls_R_factor_R_free 0.1983 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1619 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.4800 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2900 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0980 _refine_hist.d_res_low 41.8320 _refine_hist.number_atoms_solvent 240 _refine_hist.number_atoms_total 2329 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 149 _refine_hist.pdbx_B_iso_mean_ligand 96.50 _refine_hist.pdbx_B_iso_mean_solvent 74.05 _refine_hist.pdbx_number_atoms_protein 736 _refine_hist.pdbx_number_atoms_nucleic_acid 1288 _refine_hist.pdbx_number_atoms_ligand 65 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0980 2.1436 . . 118 2472 98.0000 . . . 0.4188 0.0000 0.3300 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1436 2.1934 . . 176 2491 100.0000 . . . 0.3155 0.0000 0.3026 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1934 2.2483 . . 163 2480 100.0000 . . . 0.2843 0.0000 0.2743 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2483 2.3091 . . 174 2460 100.0000 . . . 0.2724 0.0000 0.2654 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3091 2.3770 . . 121 2494 100.0000 . . . 0.2112 0.0000 0.2356 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3770 2.4537 . . 108 2547 100.0000 . . . 0.2623 0.0000 0.2180 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4537 2.5414 . . 145 2506 100.0000 . . . 0.2373 0.0000 0.2302 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5414 2.6432 . . 139 2514 100.0000 . . . 0.2698 0.0000 0.2356 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6432 2.7634 . . 120 2515 100.0000 . . . 0.2910 0.0000 0.2306 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7634 2.9091 . . 123 2543 100.0000 . . . 0.2817 0.0000 0.2220 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9091 3.0913 . . 128 2523 100.0000 . . . 0.1518 0.0000 0.1759 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0913 3.3299 . . 149 2457 100.0000 . . . 0.1732 0.0000 0.1573 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3299 3.6648 . . 141 2544 100.0000 . . . 0.2061 0.0000 0.1445 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6648 4.1947 . . 126 2501 100.0000 . . . 0.1915 0.0000 0.1316 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1947 5.2832 . . 124 2534 100.0000 . . . 0.1659 0.0000 0.1243 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.2832 41.8320 . . 136 2494 99.0000 . . . 0.1679 0.0000 0.1412 . . . . . . . . . . . # _struct.entry_id 7K9D _struct.title 'Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (crystal form I)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7K9D _struct_keywords.text 'ribonucleoprotein complex, OLE RNA, noncoding RNA, RNA, RNA-BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA-BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 6 ? L N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q9KGD7_BACHD Q9KGD7 ? 1 ;GPSPEIGQIVKIVKGRDRDQFSVIIKRVDDRFVYIADGDKRKVDRAKRKNMNHLKLIDHISPEVRHSFEETGKVTNGKLR FALKKFLEEHADLLKEGE ; 5 2 PDB 7K9D 7K9D ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7K9D A 1 ? 98 ? Q9KGD7 5 ? 102 ? 5 102 2 2 7K9D B 1 ? 60 ? 7K9D 484 ? 543 ? 484 543 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4250 ? 1 MORE -20 ? 1 'SSA (A^2)' 14400 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 42 ? ALA A 46 ? LYS A 46 ALA A 50 5 ? 5 HELX_P HELX_P2 AA2 SER A 61 ? GLY A 72 ? SER A 65 GLY A 76 1 ? 12 HELX_P HELX_P3 AA3 THR A 75 ? HIS A 90 ? THR A 79 HIS A 94 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B GTP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? B GTP 484 B G 485 1_555 ? ? ? ? ? ? ? 1.600 ? ? hydrog1 hydrog ? ? B GTP 1 N1 ? ? ? 1_555 B C 60 N3 ? ? B GTP 484 B C 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B GTP 1 N2 ? ? ? 1_555 B C 60 O2 ? ? B GTP 484 B C 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B GTP 1 O6 ? ? ? 1_555 B C 60 N4 ? ? B GTP 484 B C 543 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 59 N3 ? ? B G 485 B C 542 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 59 O2 ? ? B G 485 B C 542 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 59 N4 ? ? B G 485 B C 542 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 58 N1 ? ? B C 486 B G 541 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 58 O6 ? ? B C 486 B G 541 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 58 N2 ? ? B C 486 B G 541 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 57 N1 ? ? B C 487 B G 540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 57 O6 ? ? B C 487 B G 540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 57 N2 ? ? B C 487 B G 540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B A 5 N1 ? ? ? 1_555 B U 56 N3 ? ? B A 488 B U 539 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B A 5 N6 ? ? ? 1_555 B U 56 O4 ? ? B A 488 B U 539 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B G 6 N2 ? ? ? 1_555 B A 21 N3 ? ? B G 489 B A 504 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog16 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 55 N3 ? ? B G 489 B C 538 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 55 O2 ? ? B G 489 B C 538 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 55 N4 ? ? B G 489 B C 538 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B U 7 N3 ? ? ? 1_555 B A 54 N1 ? ? B U 490 B A 537 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B U 7 O4 ? ? ? 1_555 B A 54 N6 ? ? B U 490 B A 537 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B C 8 N4 ? ? ? 1_555 B U 53 O4 ? ? B C 491 B U 536 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog22 hydrog ? ? B U 9 N3 ? ? ? 1_555 B A 29 N1 ? ? B U 492 B A 512 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B U 9 O4 ? ? ? 1_555 B A 29 N6 ? ? B U 492 B A 512 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B G 10 N1 ? ? ? 1_555 B C 28 N3 ? ? B G 493 B C 511 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 28 O2 ? ? B G 493 B C 511 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B G 10 O6 ? ? ? 1_555 B C 28 N4 ? ? B G 493 B C 511 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 27 N3 ? ? B G 494 B C 510 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 27 O2 ? ? B G 494 B C 510 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 27 N4 ? ? B G 494 B C 510 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 495 B G 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 495 B G 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 495 B G 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B G 13 N1 ? ? ? 1_555 B C 25 N3 ? ? B G 496 B C 508 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B G 13 N2 ? ? ? 1_555 B C 25 O2 ? ? B G 496 B C 508 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B G 13 O6 ? ? ? 1_555 B C 25 N4 ? ? B G 496 B C 508 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B U 14 N3 ? ? ? 1_555 B G 24 O6 ? ? B U 497 B G 507 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog37 hydrog ? ? B U 14 O2 ? ? ? 1_555 B G 24 N1 ? ? B U 497 B G 507 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog38 hydrog ? ? B U 16 N3 ? ? ? 1_555 B A 23 N1 ? ? B U 499 B A 506 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B U 16 O4 ? ? ? 1_555 B A 23 N6 ? ? B U 499 B A 506 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 22 N3 ? ? B G 500 B C 505 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 22 O2 ? ? B G 500 B C 505 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 22 N4 ? ? B G 500 B C 505 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B G 18 N2 ? ? ? 1_555 B A 21 N7 ? ? B G 501 B A 504 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog44 hydrog ? ? B G 20 N2 ? ? ? 1_555 B U 56 O2 ? ? B G 503 B U 539 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog45 hydrog ? ? B A 30 N1 ? ? ? 1_555 B U 43 N3 ? ? B A 513 B U 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B A 30 N6 ? ? ? 1_555 B U 43 O4 ? ? B A 513 B U 526 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B G 31 N1 ? ? ? 1_555 B U 42 O2 ? ? B G 514 B U 525 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog48 hydrog ? ? B G 31 O6 ? ? ? 1_555 B U 42 N3 ? ? B G 514 B U 525 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog49 hydrog ? ? B U 32 N3 ? ? ? 1_555 B A 41 N1 ? ? B U 515 B A 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B U 32 O4 ? ? ? 1_555 B A 41 N6 ? ? B U 515 B A 524 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B U 33 N3 ? ? ? 1_555 B A 40 N1 ? ? B U 516 B A 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B U 33 O4 ? ? ? 1_555 B A 40 N6 ? ? B U 516 B A 523 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B C 34 N3 ? ? ? 1_555 B G 39 N1 ? ? B C 517 B G 522 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B C 34 N4 ? ? ? 1_555 B G 39 O6 ? ? B C 517 B G 522 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B C 34 O2 ? ? ? 1_555 B G 39 N2 ? ? B C 517 B G 522 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B U 35 O2 ? ? ? 1_555 B G 38 N1 ? ? B U 518 B G 521 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog57 hydrog ? ? B G 44 N1 ? ? ? 1_555 B C 52 N3 ? ? B G 527 B C 535 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B G 44 N2 ? ? ? 1_555 B C 52 O2 ? ? B G 527 B C 535 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B G 44 O6 ? ? ? 1_555 B C 52 N4 ? ? B G 527 B C 535 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B G 45 N1 ? ? ? 1_555 B C 51 N3 ? ? B G 528 B C 534 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B G 45 N2 ? ? ? 1_555 B C 51 O2 ? ? B G 528 B C 534 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B G 45 O6 ? ? ? 1_555 B C 51 N4 ? ? B G 528 B C 534 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B G 46 N2 ? ? ? 1_555 B A 49 N7 ? ? B G 529 B A 532 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 47 ? ASN A 50 ? LYS A 51 ASN A 54 AA1 2 PHE A 32 ? ALA A 36 ? PHE A 36 ALA A 40 AA1 3 PHE A 21 ? ARG A 27 ? PHE A 25 ARG A 31 AA1 4 GLN A 8 ? ILE A 12 ? GLN A 12 ILE A 16 AA1 5 LEU A 54 ? ILE A 60 ? LEU A 58 ILE A 64 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LYS A 49 ? O LYS A 53 N VAL A 33 ? N VAL A 37 AA1 2 3 O TYR A 34 ? O TYR A 38 N ILE A 25 ? N ILE A 29 AA1 3 4 O SER A 22 ? O SER A 26 N VAL A 10 ? N VAL A 14 AA1 4 5 N ILE A 9 ? N ILE A 13 O HIS A 59 ? O HIS A 63 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 33 ? ? -155.98 -152.85 2 1 ASP A 43 ? ? -121.87 -90.99 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 352 ? K HOH . 2 1 A HOH 354 ? K HOH . 3 1 B HOH 858 ? L HOH . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -6.311 36.350 117.951 0.4844 0.5962 0.5698 0.0586 0.0755 0.0275 4.2896 7.9113 9.2102 -0.1147 2.4774 -0.7278 0.3052 -0.1060 -0.1786 -0.4040 -0.0212 0.7035 0.2185 -0.2593 -1.2282 'X-RAY DIFFRACTION' 2 ? refined -2.586 34.987 118.329 0.5826 0.5475 0.5869 0.1153 0.0555 0.0101 4.5584 3.6464 6.9346 1.5440 1.7545 -1.7953 0.1844 -0.0749 -0.1246 -0.3659 -0.1113 0.1527 0.4972 0.4840 -0.0489 'X-RAY DIFFRACTION' 3 ? refined -0.346 31.275 130.287 0.8502 0.8092 0.6583 0.0531 0.0524 0.0808 7.3312 1.6610 8.5810 0.3106 1.7969 0.7339 0.3412 -0.0688 -0.2471 -1.0911 -0.3895 0.3591 1.0757 0.8287 -0.5096 'X-RAY DIFFRACTION' 4 ? refined -7.174 41.197 93.781 0.5487 0.7844 0.6656 0.0410 0.0833 0.0864 3.7971 1.6608 -0.0094 -1.7084 0.1384 0.4141 0.0748 -0.0983 0.0078 0.5173 0.3315 0.0461 -0.0815 -0.0336 -0.0099 'X-RAY DIFFRACTION' 5 ? refined 4.996 34.298 102.669 0.4626 0.5953 0.5821 0.0865 0.0791 0.0389 2.2983 2.9222 1.3089 -2.0109 -1.1098 1.9650 0.0122 0.0986 -0.0944 0.0940 -0.0625 -0.0693 0.0668 0.0810 -0.0180 'X-RAY DIFFRACTION' 6 ? refined 8.760 25.953 85.826 0.7181 0.8522 0.6480 0.0360 0.0264 -0.0910 4.3964 3.9753 4.8597 -0.6672 1.9895 -0.3091 0.4465 0.0009 -0.3898 0.8669 -0.5837 0.0803 -0.8833 0.2528 -0.1272 'X-RAY DIFFRACTION' 7 ? refined 15.592 35.627 73.980 0.7661 1.0312 0.6110 0.1667 0.1342 0.1225 4.8337 2.4755 3.4336 -0.8740 -1.2405 0.5569 0.1453 -0.0978 -0.0437 0.5740 0.3237 -0.0169 0.1135 0.4567 -1.0340 'X-RAY DIFFRACTION' 8 ? refined -2.017 39.526 82.228 0.9355 1.2341 0.6463 0.1757 0.1732 0.0681 7.2732 4.6023 2.7691 -0.8567 -3.0472 1.0571 0.2406 -0.1747 0.0373 2.2524 0.2203 -0.1243 -1.1528 -0.4446 -0.5279 'X-RAY DIFFRACTION' 9 ? refined -9.816 49.867 79.799 1.8079 2.0741 1.0391 0.4357 0.2186 0.4617 7.7101 5.3968 5.2733 4.6084 1.3128 -1.3784 -0.7854 0.6159 -0.0475 2.5670 0.9583 -0.6711 -3.0136 -1.3639 0.5059 'X-RAY DIFFRACTION' 10 ? refined -13.006 39.121 91.855 0.5115 1.0430 0.6425 0.1517 -0.0138 0.0083 5.4183 6.4014 7.9555 1.5901 -2.1428 -1.2025 0.3692 -0.2242 -0.0072 2.0965 -0.4218 0.6119 -1.0237 0.0746 -1.1569 'X-RAY DIFFRACTION' 11 ? refined -16.168 47.103 104.969 0.5069 0.7171 0.7156 0.1033 0.0844 0.0769 1.4284 5.4464 6.9154 0.4113 2.8233 -1.7881 -0.4927 0.2360 0.3182 0.2486 0.2429 0.5736 0.5148 -0.3807 0.2402 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 6 A 40 '( CHAIN A AND RESID 6:40 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 41 A 65 '( CHAIN A AND RESID 41:65 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 66 A 94 '( CHAIN A AND RESID 66:94 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 485 B 494 '( CHAIN B AND RESID 485:494 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 495 B 509 '( CHAIN B AND RESID 495:509 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 510 B 514 '( CHAIN B AND RESID 510:514 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 515 B 524 '( CHAIN B AND RESID 515:524 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 525 B 529 '( CHAIN B AND RESID 525:529 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 B 530 B 534 '( CHAIN B AND RESID 530:534 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 B 535 B 539 '( CHAIN B AND RESID 535:539 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 11 11 B 540 B 543 '( CHAIN B AND RESID 540:543 )' ? ? ? ? ? # _pdbx_entry_details.entry_id 7K9D _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 5 ? A GLY 1 2 1 Y 1 A ALA 95 ? A ALA 91 3 1 Y 1 A ASP 96 ? A ASP 92 4 1 Y 1 A LEU 97 ? A LEU 93 5 1 Y 1 A LEU 98 ? A LEU 94 6 1 Y 1 A LYS 99 ? A LYS 95 7 1 Y 1 A GLU 100 ? A GLU 96 8 1 Y 1 A GLY 101 ? A GLY 97 9 1 Y 1 A GLU 102 ? A GLU 98 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 EPE N1 N N N 146 EPE C2 C N N 147 EPE C3 C N N 148 EPE N4 N N N 149 EPE C5 C N N 150 EPE C6 C N N 151 EPE C7 C N N 152 EPE C8 C N N 153 EPE O8 O N N 154 EPE C9 C N N 155 EPE C10 C N N 156 EPE S S N N 157 EPE O1S O N N 158 EPE O2S O N N 159 EPE O3S O N N 160 EPE H21 H N N 161 EPE H22 H N N 162 EPE H31 H N N 163 EPE H32 H N N 164 EPE H51 H N N 165 EPE H52 H N N 166 EPE H61 H N N 167 EPE H62 H N N 168 EPE H71 H N N 169 EPE H72 H N N 170 EPE H81 H N N 171 EPE H82 H N N 172 EPE HO8 H N N 173 EPE H91 H N N 174 EPE H92 H N N 175 EPE H101 H N N 176 EPE H102 H N N 177 EPE HOS3 H N N 178 G OP3 O N N 179 G P P N N 180 G OP1 O N N 181 G OP2 O N N 182 G "O5'" O N N 183 G "C5'" C N N 184 G "C4'" C N R 185 G "O4'" O N N 186 G "C3'" C N S 187 G "O3'" O N N 188 G "C2'" C N R 189 G "O2'" O N N 190 G "C1'" C N R 191 G N9 N Y N 192 G C8 C Y N 193 G N7 N Y N 194 G C5 C Y N 195 G C6 C N N 196 G O6 O N N 197 G N1 N N N 198 G C2 C N N 199 G N2 N N N 200 G N3 N N N 201 G C4 C Y N 202 G HOP3 H N N 203 G HOP2 H N N 204 G "H5'" H N N 205 G "H5''" H N N 206 G "H4'" H N N 207 G "H3'" H N N 208 G "HO3'" H N N 209 G "H2'" H N N 210 G "HO2'" H N N 211 G "H1'" H N N 212 G H8 H N N 213 G H1 H N N 214 G H21 H N N 215 G H22 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 GTP PG P N N 266 GTP O1G O N N 267 GTP O2G O N N 268 GTP O3G O N N 269 GTP O3B O N N 270 GTP PB P N N 271 GTP O1B O N N 272 GTP O2B O N N 273 GTP O3A O N N 274 GTP PA P N N 275 GTP O1A O N N 276 GTP O2A O N N 277 GTP "O5'" O N N 278 GTP "C5'" C N N 279 GTP "C4'" C N R 280 GTP "O4'" O N N 281 GTP "C3'" C N S 282 GTP "O3'" O N N 283 GTP "C2'" C N R 284 GTP "O2'" O N N 285 GTP "C1'" C N R 286 GTP N9 N Y N 287 GTP C8 C Y N 288 GTP N7 N Y N 289 GTP C5 C Y N 290 GTP C6 C N N 291 GTP O6 O N N 292 GTP N1 N N N 293 GTP C2 C N N 294 GTP N2 N N N 295 GTP N3 N N N 296 GTP C4 C Y N 297 GTP HOG2 H N N 298 GTP HOG3 H N N 299 GTP HOB2 H N N 300 GTP HOA2 H N N 301 GTP "H5'" H N N 302 GTP "H5''" H N N 303 GTP "H4'" H N N 304 GTP "H3'" H N N 305 GTP "HO3'" H N N 306 GTP "H2'" H N N 307 GTP "HO2'" H N N 308 GTP "H1'" H N N 309 GTP H8 H N N 310 GTP HN1 H N N 311 GTP HN21 H N N 312 GTP HN22 H N N 313 HIS N N N N 314 HIS CA C N S 315 HIS C C N N 316 HIS O O N N 317 HIS CB C N N 318 HIS CG C Y N 319 HIS ND1 N Y N 320 HIS CD2 C Y N 321 HIS CE1 C Y N 322 HIS NE2 N Y N 323 HIS OXT O N N 324 HIS H H N N 325 HIS H2 H N N 326 HIS HA H N N 327 HIS HB2 H N N 328 HIS HB3 H N N 329 HIS HD1 H N N 330 HIS HD2 H N N 331 HIS HE1 H N N 332 HIS HE2 H N N 333 HIS HXT H N N 334 HOH O O N N 335 HOH H1 H N N 336 HOH H2 H N N 337 ILE N N N N 338 ILE CA C N S 339 ILE C C N N 340 ILE O O N N 341 ILE CB C N S 342 ILE CG1 C N N 343 ILE CG2 C N N 344 ILE CD1 C N N 345 ILE OXT O N N 346 ILE H H N N 347 ILE H2 H N N 348 ILE HA H N N 349 ILE HB H N N 350 ILE HG12 H N N 351 ILE HG13 H N N 352 ILE HG21 H N N 353 ILE HG22 H N N 354 ILE HG23 H N N 355 ILE HD11 H N N 356 ILE HD12 H N N 357 ILE HD13 H N N 358 ILE HXT H N N 359 LEU N N N N 360 LEU CA C N S 361 LEU C C N N 362 LEU O O N N 363 LEU CB C N N 364 LEU CG C N N 365 LEU CD1 C N N 366 LEU CD2 C N N 367 LEU OXT O N N 368 LEU H H N N 369 LEU H2 H N N 370 LEU HA H N N 371 LEU HB2 H N N 372 LEU HB3 H N N 373 LEU HG H N N 374 LEU HD11 H N N 375 LEU HD12 H N N 376 LEU HD13 H N N 377 LEU HD21 H N N 378 LEU HD22 H N N 379 LEU HD23 H N N 380 LEU HXT H N N 381 LYS N N N N 382 LYS CA C N S 383 LYS C C N N 384 LYS O O N N 385 LYS CB C N N 386 LYS CG C N N 387 LYS CD C N N 388 LYS CE C N N 389 LYS NZ N N N 390 LYS OXT O N N 391 LYS H H N N 392 LYS H2 H N N 393 LYS HA H N N 394 LYS HB2 H N N 395 LYS HB3 H N N 396 LYS HG2 H N N 397 LYS HG3 H N N 398 LYS HD2 H N N 399 LYS HD3 H N N 400 LYS HE2 H N N 401 LYS HE3 H N N 402 LYS HZ1 H N N 403 LYS HZ2 H N N 404 LYS HZ3 H N N 405 LYS HXT H N N 406 MET N N N N 407 MET CA C N S 408 MET C C N N 409 MET O O N N 410 MET CB C N N 411 MET CG C N N 412 MET SD S N N 413 MET CE C N N 414 MET OXT O N N 415 MET H H N N 416 MET H2 H N N 417 MET HA H N N 418 MET HB2 H N N 419 MET HB3 H N N 420 MET HG2 H N N 421 MET HG3 H N N 422 MET HE1 H N N 423 MET HE2 H N N 424 MET HE3 H N N 425 MET HXT H N N 426 MPD C1 C N N 427 MPD C2 C N N 428 MPD O2 O N N 429 MPD CM C N N 430 MPD C3 C N N 431 MPD C4 C N S 432 MPD O4 O N N 433 MPD C5 C N N 434 MPD H11 H N N 435 MPD H12 H N N 436 MPD H13 H N N 437 MPD HO2 H N N 438 MPD HM1 H N N 439 MPD HM2 H N N 440 MPD HM3 H N N 441 MPD H31 H N N 442 MPD H32 H N N 443 MPD H4 H N N 444 MPD HO4 H N N 445 MPD H51 H N N 446 MPD H52 H N N 447 MPD H53 H N N 448 NCO CO CO N N 449 NCO N1 N N N 450 NCO N2 N N N 451 NCO N3 N N N 452 NCO N4 N N N 453 NCO N5 N N N 454 NCO N6 N N N 455 NCO HN11 H N N 456 NCO HN12 H N N 457 NCO HN13 H N N 458 NCO HN21 H N N 459 NCO HN22 H N N 460 NCO HN23 H N N 461 NCO HN31 H N N 462 NCO HN32 H N N 463 NCO HN33 H N N 464 NCO HN41 H N N 465 NCO HN42 H N N 466 NCO HN43 H N N 467 NCO HN51 H N N 468 NCO HN52 H N N 469 NCO HN53 H N N 470 NCO HN61 H N N 471 NCO HN62 H N N 472 NCO HN63 H N N 473 PHE N N N N 474 PHE CA C N S 475 PHE C C N N 476 PHE O O N N 477 PHE CB C N N 478 PHE CG C Y N 479 PHE CD1 C Y N 480 PHE CD2 C Y N 481 PHE CE1 C Y N 482 PHE CE2 C Y N 483 PHE CZ C Y N 484 PHE OXT O N N 485 PHE H H N N 486 PHE H2 H N N 487 PHE HA H N N 488 PHE HB2 H N N 489 PHE HB3 H N N 490 PHE HD1 H N N 491 PHE HD2 H N N 492 PHE HE1 H N N 493 PHE HE2 H N N 494 PHE HZ H N N 495 PHE HXT H N N 496 PRO N N N N 497 PRO CA C N S 498 PRO C C N N 499 PRO O O N N 500 PRO CB C N N 501 PRO CG C N N 502 PRO CD C N N 503 PRO OXT O N N 504 PRO H H N N 505 PRO HA H N N 506 PRO HB2 H N N 507 PRO HB3 H N N 508 PRO HG2 H N N 509 PRO HG3 H N N 510 PRO HD2 H N N 511 PRO HD3 H N N 512 PRO HXT H N N 513 SER N N N N 514 SER CA C N S 515 SER C C N N 516 SER O O N N 517 SER CB C N N 518 SER OG O N N 519 SER OXT O N N 520 SER H H N N 521 SER H2 H N N 522 SER HA H N N 523 SER HB2 H N N 524 SER HB3 H N N 525 SER HG H N N 526 SER HXT H N N 527 THR N N N N 528 THR CA C N S 529 THR C C N N 530 THR O O N N 531 THR CB C N R 532 THR OG1 O N N 533 THR CG2 C N N 534 THR OXT O N N 535 THR H H N N 536 THR H2 H N N 537 THR HA H N N 538 THR HB H N N 539 THR HG1 H N N 540 THR HG21 H N N 541 THR HG22 H N N 542 THR HG23 H N N 543 THR HXT H N N 544 TYR N N N N 545 TYR CA C N S 546 TYR C C N N 547 TYR O O N N 548 TYR CB C N N 549 TYR CG C Y N 550 TYR CD1 C Y N 551 TYR CD2 C Y N 552 TYR CE1 C Y N 553 TYR CE2 C Y N 554 TYR CZ C Y N 555 TYR OH O N N 556 TYR OXT O N N 557 TYR H H N N 558 TYR H2 H N N 559 TYR HA H N N 560 TYR HB2 H N N 561 TYR HB3 H N N 562 TYR HD1 H N N 563 TYR HD2 H N N 564 TYR HE1 H N N 565 TYR HE2 H N N 566 TYR HH H N N 567 TYR HXT H N N 568 U OP3 O N N 569 U P P N N 570 U OP1 O N N 571 U OP2 O N N 572 U "O5'" O N N 573 U "C5'" C N N 574 U "C4'" C N R 575 U "O4'" O N N 576 U "C3'" C N S 577 U "O3'" O N N 578 U "C2'" C N R 579 U "O2'" O N N 580 U "C1'" C N R 581 U N1 N N N 582 U C2 C N N 583 U O2 O N N 584 U N3 N N N 585 U C4 C N N 586 U O4 O N N 587 U C5 C N N 588 U C6 C N N 589 U HOP3 H N N 590 U HOP2 H N N 591 U "H5'" H N N 592 U "H5''" H N N 593 U "H4'" H N N 594 U "H3'" H N N 595 U "HO3'" H N N 596 U "H2'" H N N 597 U "HO2'" H N N 598 U "H1'" H N N 599 U H3 H N N 600 U H5 H N N 601 U H6 H N N 602 VAL N N N N 603 VAL CA C N S 604 VAL C C N N 605 VAL O O N N 606 VAL CB C N N 607 VAL CG1 C N N 608 VAL CG2 C N N 609 VAL OXT O N N 610 VAL H H N N 611 VAL H2 H N N 612 VAL HA H N N 613 VAL HB H N N 614 VAL HG11 H N N 615 VAL HG12 H N N 616 VAL HG13 H N N 617 VAL HG21 H N N 618 VAL HG22 H N N 619 VAL HG23 H N N 620 VAL HXT H N N 621 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 EPE N1 C2 sing N N 145 EPE N1 C6 sing N N 146 EPE N1 C9 sing N N 147 EPE C2 C3 sing N N 148 EPE C2 H21 sing N N 149 EPE C2 H22 sing N N 150 EPE C3 N4 sing N N 151 EPE C3 H31 sing N N 152 EPE C3 H32 sing N N 153 EPE N4 C5 sing N N 154 EPE N4 C7 sing N N 155 EPE C5 C6 sing N N 156 EPE C5 H51 sing N N 157 EPE C5 H52 sing N N 158 EPE C6 H61 sing N N 159 EPE C6 H62 sing N N 160 EPE C7 C8 sing N N 161 EPE C7 H71 sing N N 162 EPE C7 H72 sing N N 163 EPE C8 O8 sing N N 164 EPE C8 H81 sing N N 165 EPE C8 H82 sing N N 166 EPE O8 HO8 sing N N 167 EPE C9 C10 sing N N 168 EPE C9 H91 sing N N 169 EPE C9 H92 sing N N 170 EPE C10 S sing N N 171 EPE C10 H101 sing N N 172 EPE C10 H102 sing N N 173 EPE S O1S doub N N 174 EPE S O2S doub N N 175 EPE S O3S sing N N 176 EPE O3S HOS3 sing N N 177 G OP3 P sing N N 178 G OP3 HOP3 sing N N 179 G P OP1 doub N N 180 G P OP2 sing N N 181 G P "O5'" sing N N 182 G OP2 HOP2 sing N N 183 G "O5'" "C5'" sing N N 184 G "C5'" "C4'" sing N N 185 G "C5'" "H5'" sing N N 186 G "C5'" "H5''" sing N N 187 G "C4'" "O4'" sing N N 188 G "C4'" "C3'" sing N N 189 G "C4'" "H4'" sing N N 190 G "O4'" "C1'" sing N N 191 G "C3'" "O3'" sing N N 192 G "C3'" "C2'" sing N N 193 G "C3'" "H3'" sing N N 194 G "O3'" "HO3'" sing N N 195 G "C2'" "O2'" sing N N 196 G "C2'" "C1'" sing N N 197 G "C2'" "H2'" sing N N 198 G "O2'" "HO2'" sing N N 199 G "C1'" N9 sing N N 200 G "C1'" "H1'" sing N N 201 G N9 C8 sing Y N 202 G N9 C4 sing Y N 203 G C8 N7 doub Y N 204 G C8 H8 sing N N 205 G N7 C5 sing Y N 206 G C5 C6 sing N N 207 G C5 C4 doub Y N 208 G C6 O6 doub N N 209 G C6 N1 sing N N 210 G N1 C2 sing N N 211 G N1 H1 sing N N 212 G C2 N2 sing N N 213 G C2 N3 doub N N 214 G N2 H21 sing N N 215 G N2 H22 sing N N 216 G N3 C4 sing N N 217 GLN N CA sing N N 218 GLN N H sing N N 219 GLN N H2 sing N N 220 GLN CA C sing N N 221 GLN CA CB sing N N 222 GLN CA HA sing N N 223 GLN C O doub N N 224 GLN C OXT sing N N 225 GLN CB CG sing N N 226 GLN CB HB2 sing N N 227 GLN CB HB3 sing N N 228 GLN CG CD sing N N 229 GLN CG HG2 sing N N 230 GLN CG HG3 sing N N 231 GLN CD OE1 doub N N 232 GLN CD NE2 sing N N 233 GLN NE2 HE21 sing N N 234 GLN NE2 HE22 sing N N 235 GLN OXT HXT sing N N 236 GLU N CA sing N N 237 GLU N H sing N N 238 GLU N H2 sing N N 239 GLU CA C sing N N 240 GLU CA CB sing N N 241 GLU CA HA sing N N 242 GLU C O doub N N 243 GLU C OXT sing N N 244 GLU CB CG sing N N 245 GLU CB HB2 sing N N 246 GLU CB HB3 sing N N 247 GLU CG CD sing N N 248 GLU CG HG2 sing N N 249 GLU CG HG3 sing N N 250 GLU CD OE1 doub N N 251 GLU CD OE2 sing N N 252 GLU OE2 HE2 sing N N 253 GLU OXT HXT sing N N 254 GLY N CA sing N N 255 GLY N H sing N N 256 GLY N H2 sing N N 257 GLY CA C sing N N 258 GLY CA HA2 sing N N 259 GLY CA HA3 sing N N 260 GLY C O doub N N 261 GLY C OXT sing N N 262 GLY OXT HXT sing N N 263 GTP PG O1G doub N N 264 GTP PG O2G sing N N 265 GTP PG O3G sing N N 266 GTP PG O3B sing N N 267 GTP O2G HOG2 sing N N 268 GTP O3G HOG3 sing N N 269 GTP O3B PB sing N N 270 GTP PB O1B doub N N 271 GTP PB O2B sing N N 272 GTP PB O3A sing N N 273 GTP O2B HOB2 sing N N 274 GTP O3A PA sing N N 275 GTP PA O1A doub N N 276 GTP PA O2A sing N N 277 GTP PA "O5'" sing N N 278 GTP O2A HOA2 sing N N 279 GTP "O5'" "C5'" sing N N 280 GTP "C5'" "C4'" sing N N 281 GTP "C5'" "H5'" sing N N 282 GTP "C5'" "H5''" sing N N 283 GTP "C4'" "O4'" sing N N 284 GTP "C4'" "C3'" sing N N 285 GTP "C4'" "H4'" sing N N 286 GTP "O4'" "C1'" sing N N 287 GTP "C3'" "O3'" sing N N 288 GTP "C3'" "C2'" sing N N 289 GTP "C3'" "H3'" sing N N 290 GTP "O3'" "HO3'" sing N N 291 GTP "C2'" "O2'" sing N N 292 GTP "C2'" "C1'" sing N N 293 GTP "C2'" "H2'" sing N N 294 GTP "O2'" "HO2'" sing N N 295 GTP "C1'" N9 sing N N 296 GTP "C1'" "H1'" sing N N 297 GTP N9 C8 sing Y N 298 GTP N9 C4 sing Y N 299 GTP C8 N7 doub Y N 300 GTP C8 H8 sing N N 301 GTP N7 C5 sing Y N 302 GTP C5 C6 sing N N 303 GTP C5 C4 doub Y N 304 GTP C6 O6 doub N N 305 GTP C6 N1 sing N N 306 GTP N1 C2 sing N N 307 GTP N1 HN1 sing N N 308 GTP C2 N2 sing N N 309 GTP C2 N3 doub N N 310 GTP N2 HN21 sing N N 311 GTP N2 HN22 sing N N 312 GTP N3 C4 sing N N 313 HIS N CA sing N N 314 HIS N H sing N N 315 HIS N H2 sing N N 316 HIS CA C sing N N 317 HIS CA CB sing N N 318 HIS CA HA sing N N 319 HIS C O doub N N 320 HIS C OXT sing N N 321 HIS CB CG sing N N 322 HIS CB HB2 sing N N 323 HIS CB HB3 sing N N 324 HIS CG ND1 sing Y N 325 HIS CG CD2 doub Y N 326 HIS ND1 CE1 doub Y N 327 HIS ND1 HD1 sing N N 328 HIS CD2 NE2 sing Y N 329 HIS CD2 HD2 sing N N 330 HIS CE1 NE2 sing Y N 331 HIS CE1 HE1 sing N N 332 HIS NE2 HE2 sing N N 333 HIS OXT HXT sing N N 334 HOH O H1 sing N N 335 HOH O H2 sing N N 336 ILE N CA sing N N 337 ILE N H sing N N 338 ILE N H2 sing N N 339 ILE CA C sing N N 340 ILE CA CB sing N N 341 ILE CA HA sing N N 342 ILE C O doub N N 343 ILE C OXT sing N N 344 ILE CB CG1 sing N N 345 ILE CB CG2 sing N N 346 ILE CB HB sing N N 347 ILE CG1 CD1 sing N N 348 ILE CG1 HG12 sing N N 349 ILE CG1 HG13 sing N N 350 ILE CG2 HG21 sing N N 351 ILE CG2 HG22 sing N N 352 ILE CG2 HG23 sing N N 353 ILE CD1 HD11 sing N N 354 ILE CD1 HD12 sing N N 355 ILE CD1 HD13 sing N N 356 ILE OXT HXT sing N N 357 LEU N CA sing N N 358 LEU N H sing N N 359 LEU N H2 sing N N 360 LEU CA C sing N N 361 LEU CA CB sing N N 362 LEU CA HA sing N N 363 LEU C O doub N N 364 LEU C OXT sing N N 365 LEU CB CG sing N N 366 LEU CB HB2 sing N N 367 LEU CB HB3 sing N N 368 LEU CG CD1 sing N N 369 LEU CG CD2 sing N N 370 LEU CG HG sing N N 371 LEU CD1 HD11 sing N N 372 LEU CD1 HD12 sing N N 373 LEU CD1 HD13 sing N N 374 LEU CD2 HD21 sing N N 375 LEU CD2 HD22 sing N N 376 LEU CD2 HD23 sing N N 377 LEU OXT HXT sing N N 378 LYS N CA sing N N 379 LYS N H sing N N 380 LYS N H2 sing N N 381 LYS CA C sing N N 382 LYS CA CB sing N N 383 LYS CA HA sing N N 384 LYS C O doub N N 385 LYS C OXT sing N N 386 LYS CB CG sing N N 387 LYS CB HB2 sing N N 388 LYS CB HB3 sing N N 389 LYS CG CD sing N N 390 LYS CG HG2 sing N N 391 LYS CG HG3 sing N N 392 LYS CD CE sing N N 393 LYS CD HD2 sing N N 394 LYS CD HD3 sing N N 395 LYS CE NZ sing N N 396 LYS CE HE2 sing N N 397 LYS CE HE3 sing N N 398 LYS NZ HZ1 sing N N 399 LYS NZ HZ2 sing N N 400 LYS NZ HZ3 sing N N 401 LYS OXT HXT sing N N 402 MET N CA sing N N 403 MET N H sing N N 404 MET N H2 sing N N 405 MET CA C sing N N 406 MET CA CB sing N N 407 MET CA HA sing N N 408 MET C O doub N N 409 MET C OXT sing N N 410 MET CB CG sing N N 411 MET CB HB2 sing N N 412 MET CB HB3 sing N N 413 MET CG SD sing N N 414 MET CG HG2 sing N N 415 MET CG HG3 sing N N 416 MET SD CE sing N N 417 MET CE HE1 sing N N 418 MET CE HE2 sing N N 419 MET CE HE3 sing N N 420 MET OXT HXT sing N N 421 MPD C1 C2 sing N N 422 MPD C1 H11 sing N N 423 MPD C1 H12 sing N N 424 MPD C1 H13 sing N N 425 MPD C2 O2 sing N N 426 MPD C2 CM sing N N 427 MPD C2 C3 sing N N 428 MPD O2 HO2 sing N N 429 MPD CM HM1 sing N N 430 MPD CM HM2 sing N N 431 MPD CM HM3 sing N N 432 MPD C3 C4 sing N N 433 MPD C3 H31 sing N N 434 MPD C3 H32 sing N N 435 MPD C4 O4 sing N N 436 MPD C4 C5 sing N N 437 MPD C4 H4 sing N N 438 MPD O4 HO4 sing N N 439 MPD C5 H51 sing N N 440 MPD C5 H52 sing N N 441 MPD C5 H53 sing N N 442 NCO CO N1 sing N N 443 NCO CO N2 sing N N 444 NCO CO N3 sing N N 445 NCO CO N4 sing N N 446 NCO CO N5 sing N N 447 NCO CO N6 sing N N 448 NCO N1 HN11 sing N N 449 NCO N1 HN12 sing N N 450 NCO N1 HN13 sing N N 451 NCO N2 HN21 sing N N 452 NCO N2 HN22 sing N N 453 NCO N2 HN23 sing N N 454 NCO N3 HN31 sing N N 455 NCO N3 HN32 sing N N 456 NCO N3 HN33 sing N N 457 NCO N4 HN41 sing N N 458 NCO N4 HN42 sing N N 459 NCO N4 HN43 sing N N 460 NCO N5 HN51 sing N N 461 NCO N5 HN52 sing N N 462 NCO N5 HN53 sing N N 463 NCO N6 HN61 sing N N 464 NCO N6 HN62 sing N N 465 NCO N6 HN63 sing N N 466 PHE N CA sing N N 467 PHE N H sing N N 468 PHE N H2 sing N N 469 PHE CA C sing N N 470 PHE CA CB sing N N 471 PHE CA HA sing N N 472 PHE C O doub N N 473 PHE C OXT sing N N 474 PHE CB CG sing N N 475 PHE CB HB2 sing N N 476 PHE CB HB3 sing N N 477 PHE CG CD1 doub Y N 478 PHE CG CD2 sing Y N 479 PHE CD1 CE1 sing Y N 480 PHE CD1 HD1 sing N N 481 PHE CD2 CE2 doub Y N 482 PHE CD2 HD2 sing N N 483 PHE CE1 CZ doub Y N 484 PHE CE1 HE1 sing N N 485 PHE CE2 CZ sing Y N 486 PHE CE2 HE2 sing N N 487 PHE CZ HZ sing N N 488 PHE OXT HXT sing N N 489 PRO N CA sing N N 490 PRO N CD sing N N 491 PRO N H sing N N 492 PRO CA C sing N N 493 PRO CA CB sing N N 494 PRO CA HA sing N N 495 PRO C O doub N N 496 PRO C OXT sing N N 497 PRO CB CG sing N N 498 PRO CB HB2 sing N N 499 PRO CB HB3 sing N N 500 PRO CG CD sing N N 501 PRO CG HG2 sing N N 502 PRO CG HG3 sing N N 503 PRO CD HD2 sing N N 504 PRO CD HD3 sing N N 505 PRO OXT HXT sing N N 506 SER N CA sing N N 507 SER N H sing N N 508 SER N H2 sing N N 509 SER CA C sing N N 510 SER CA CB sing N N 511 SER CA HA sing N N 512 SER C O doub N N 513 SER C OXT sing N N 514 SER CB OG sing N N 515 SER CB HB2 sing N N 516 SER CB HB3 sing N N 517 SER OG HG sing N N 518 SER OXT HXT sing N N 519 THR N CA sing N N 520 THR N H sing N N 521 THR N H2 sing N N 522 THR CA C sing N N 523 THR CA CB sing N N 524 THR CA HA sing N N 525 THR C O doub N N 526 THR C OXT sing N N 527 THR CB OG1 sing N N 528 THR CB CG2 sing N N 529 THR CB HB sing N N 530 THR OG1 HG1 sing N N 531 THR CG2 HG21 sing N N 532 THR CG2 HG22 sing N N 533 THR CG2 HG23 sing N N 534 THR OXT HXT sing N N 535 TYR N CA sing N N 536 TYR N H sing N N 537 TYR N H2 sing N N 538 TYR CA C sing N N 539 TYR CA CB sing N N 540 TYR CA HA sing N N 541 TYR C O doub N N 542 TYR C OXT sing N N 543 TYR CB CG sing N N 544 TYR CB HB2 sing N N 545 TYR CB HB3 sing N N 546 TYR CG CD1 doub Y N 547 TYR CG CD2 sing Y N 548 TYR CD1 CE1 sing Y N 549 TYR CD1 HD1 sing N N 550 TYR CD2 CE2 doub Y N 551 TYR CD2 HD2 sing N N 552 TYR CE1 CZ doub Y N 553 TYR CE1 HE1 sing N N 554 TYR CE2 CZ sing Y N 555 TYR CE2 HE2 sing N N 556 TYR CZ OH sing N N 557 TYR OH HH sing N N 558 TYR OXT HXT sing N N 559 U OP3 P sing N N 560 U OP3 HOP3 sing N N 561 U P OP1 doub N N 562 U P OP2 sing N N 563 U P "O5'" sing N N 564 U OP2 HOP2 sing N N 565 U "O5'" "C5'" sing N N 566 U "C5'" "C4'" sing N N 567 U "C5'" "H5'" sing N N 568 U "C5'" "H5''" sing N N 569 U "C4'" "O4'" sing N N 570 U "C4'" "C3'" sing N N 571 U "C4'" "H4'" sing N N 572 U "O4'" "C1'" sing N N 573 U "C3'" "O3'" sing N N 574 U "C3'" "C2'" sing N N 575 U "C3'" "H3'" sing N N 576 U "O3'" "HO3'" sing N N 577 U "C2'" "O2'" sing N N 578 U "C2'" "C1'" sing N N 579 U "C2'" "H2'" sing N N 580 U "O2'" "HO2'" sing N N 581 U "C1'" N1 sing N N 582 U "C1'" "H1'" sing N N 583 U N1 C2 sing N N 584 U N1 C6 sing N N 585 U C2 O2 doub N N 586 U C2 N3 sing N N 587 U N3 C4 sing N N 588 U N3 H3 sing N N 589 U C4 O4 doub N N 590 U C4 C5 sing N N 591 U C5 C6 doub N N 592 U C5 H5 sing N N 593 U C6 H6 sing N N 594 VAL N CA sing N N 595 VAL N H sing N N 596 VAL N H2 sing N N 597 VAL CA C sing N N 598 VAL CA CB sing N N 599 VAL CA HA sing N N 600 VAL C O doub N N 601 VAL C OXT sing N N 602 VAL CB CG1 sing N N 603 VAL CB CG2 sing N N 604 VAL CB HB sing N N 605 VAL CG1 HG11 sing N N 606 VAL CG1 HG12 sing N N 607 VAL CG1 HG13 sing N N 608 VAL CG2 HG21 sing N N 609 VAL CG2 HG22 sing N N 610 VAL CG2 HG23 sing N N 611 VAL OXT HXT sing N N 612 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7K9D 'double helix' 7K9D 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B GTP 1 1_555 B C 60 1_555 -0.546 -0.008 -0.433 -13.376 -0.543 4.924 1 B_GTP484:C543_B B 484 ? B 543 ? 19 1 1 B G 2 1_555 B C 59 1_555 -0.165 -0.095 -0.238 -3.792 -7.322 2.448 2 B_G485:C542_B B 485 ? B 542 ? 19 1 1 B C 3 1_555 B G 58 1_555 0.403 -0.087 -0.185 1.495 -6.688 3.619 3 B_C486:G541_B B 486 ? B 541 ? 19 1 1 B C 4 1_555 B G 57 1_555 0.304 -0.076 -0.263 2.427 -6.736 3.103 4 B_C487:G540_B B 487 ? B 540 ? 19 1 1 B A 5 1_555 B U 56 1_555 0.155 -0.053 0.171 -2.815 -7.888 6.228 5 B_A488:U539_B B 488 ? B 539 ? 20 1 1 B G 6 1_555 B C 55 1_555 -0.217 -0.055 -0.195 -14.646 -21.585 5.213 6 B_G489:C538_B B 489 ? B 538 ? 19 1 1 B U 7 1_555 B A 54 1_555 0.114 -0.038 0.273 -14.326 -16.312 -0.824 7 B_U490:A537_B B 490 ? B 537 ? 20 1 1 B C 8 1_555 B U 53 1_555 0.215 0.105 -0.241 4.441 1.790 -32.281 8 B_C491:U536_B B 491 ? B 536 ? ? ? 1 B G 44 1_555 B C 52 1_555 -0.177 -0.106 -0.281 -10.356 -11.727 -0.230 9 B_G527:C535_B B 527 ? B 535 ? 19 1 1 B G 45 1_555 B C 51 1_555 -0.058 -0.028 -0.392 -19.520 -6.551 5.061 10 B_G528:C534_B B 528 ? B 534 ? 19 1 1 B G 46 1_555 B A 49 1_555 7.980 -5.422 0.392 16.530 4.360 -51.145 11 B_G529:A532_B B 529 ? B 532 ? ? ? 1 B A 21 1_555 B G 18 1_555 -7.832 -5.207 0.877 -10.582 -15.805 -46.597 12 B_A504:G501_B B 504 ? B 501 ? ? ? 1 B C 22 1_555 B G 17 1_555 -0.008 -0.269 -0.222 2.644 -1.273 -2.340 13 B_C505:G500_B B 505 ? B 500 ? 19 1 1 B A 23 1_555 B U 16 1_555 0.297 -0.166 -0.121 1.583 -2.817 6.606 14 B_A506:U499_B B 506 ? B 499 ? 20 1 1 B G 24 1_555 B U 14 1_555 -2.453 -0.647 0.116 6.044 -10.759 0.007 15 B_G507:U497_B B 507 ? B 497 ? 28 1 1 B C 25 1_555 B G 13 1_555 0.092 -0.103 -0.187 9.468 -16.815 4.309 16 B_C508:G496_B B 508 ? B 496 ? 19 1 1 B G 26 1_555 B C 12 1_555 -0.213 -0.196 -0.240 1.561 -5.458 1.954 17 B_G509:C495_B B 509 ? B 495 ? 19 1 1 B C 27 1_555 B G 11 1_555 0.399 -0.174 -0.348 5.392 -6.638 2.253 18 B_C510:G494_B B 510 ? B 494 ? 19 1 1 B C 28 1_555 B G 10 1_555 0.102 -0.120 -0.074 4.364 -6.482 1.292 19 B_C511:G493_B B 511 ? B 493 ? 19 1 1 B A 29 1_555 B U 9 1_555 0.208 -0.168 -0.097 -0.670 -2.257 2.815 20 B_A512:U492_B B 512 ? B 492 ? 20 1 1 B A 30 1_555 B U 43 1_555 0.357 -0.215 -0.316 -7.151 -3.129 0.384 21 B_A513:U526_B B 513 ? B 526 ? 20 1 1 B G 31 1_555 B U 42 1_555 -2.098 -0.437 -0.059 -0.171 -13.551 4.509 22 B_G514:U525_B B 514 ? B 525 ? 28 1 1 B U 32 1_555 B A 41 1_555 0.252 0.044 0.116 0.641 -14.875 6.966 23 B_U515:A524_B B 515 ? B 524 ? 20 1 1 B U 33 1_555 B A 40 1_555 0.224 -0.115 -0.058 4.700 -6.523 5.001 24 B_U516:A523_B B 516 ? B 523 ? 20 1 1 B C 34 1_555 B G 39 1_555 0.851 -0.114 -0.252 3.376 -3.079 4.698 25 B_C517:G522_B B 517 ? B 522 ? 19 1 1 B U 35 1_555 B G 38 1_555 1.221 -5.013 -0.209 -3.010 -2.672 -101.809 26 B_U518:G521_B B 518 ? B 521 ? ? 6 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B GTP 1 1_555 B C 60 1_555 B G 2 1_555 B C 59 1_555 -0.733 -2.101 3.027 -3.745 7.811 25.861 -6.119 0.759 2.382 16.862 8.084 27.250 1 BB_GTP484G485:C542C543_BB B 484 ? B 543 ? B 485 ? B 542 ? 1 B G 2 1_555 B C 59 1_555 B C 3 1_555 B G 58 1_555 0.194 -1.577 3.114 0.345 9.456 34.679 -3.763 -0.271 2.610 15.509 -0.566 35.909 2 BB_G485C486:G541C542_BB B 485 ? B 542 ? B 486 ? B 541 ? 1 B C 3 1_555 B G 58 1_555 B C 4 1_555 B G 57 1_555 0.283 -2.144 3.203 3.268 10.700 26.307 -6.445 0.067 2.199 22.272 -6.803 28.549 3 BB_C486C487:G540G541_BB B 486 ? B 541 ? B 487 ? B 540 ? 1 B C 4 1_555 B G 57 1_555 B A 5 1_555 B U 56 1_555 0.510 -1.550 3.181 -1.432 11.094 31.016 -4.420 -1.118 2.470 19.950 2.575 32.925 4 BB_C487A488:U539G540_BB B 487 ? B 540 ? B 488 ? B 539 ? 1 B A 5 1_555 B U 56 1_555 B G 6 1_555 B C 55 1_555 0.461 -2.141 3.537 6.545 9.073 28.060 -5.961 0.447 2.762 17.840 -12.870 30.167 5 BB_A488G489:C538U539_BB B 488 ? B 539 ? B 489 ? B 538 ? 1 B G 6 1_555 B C 55 1_555 B U 7 1_555 B A 54 1_555 -0.700 -1.502 3.104 -3.498 6.023 35.367 -3.217 0.674 2.872 9.797 5.689 36.025 6 BB_G489U490:A537C538_BB B 489 ? B 538 ? B 490 ? B 537 ? 1 B U 7 1_555 B A 54 1_555 B C 8 1_555 B U 53 1_555 -1.601 -1.406 2.909 6.563 15.728 30.886 -4.079 3.381 1.659 27.100 -11.308 35.175 7 BB_U490C491:U536A537_BB B 490 ? B 537 ? B 491 ? B 536 ? 1 B C 8 1_555 B U 53 1_555 B G 44 1_555 B C 52 1_555 2.624 -2.215 3.804 2.664 6.312 33.908 -4.832 -3.949 3.537 10.688 -4.510 34.574 8 BB_C491G527:C535U536_BB B 491 ? B 536 ? B 527 ? B 535 ? 1 B G 44 1_555 B C 52 1_555 B G 45 1_555 B C 51 1_555 0.192 -1.899 3.581 1.722 3.461 34.913 -3.701 -0.043 3.388 5.747 -2.859 35.120 9 BB_G527G528:C534C535_BB B 527 ? B 535 ? B 528 ? B 534 ? 1 B G 45 1_555 B C 51 1_555 B G 46 1_555 B A 49 1_555 -2.682 -1.574 2.501 -6.120 -0.018 72.907 -1.321 2.094 2.688 -0.015 5.141 73.128 10 BB_G528G529:A532C534_BB B 528 ? B 534 ? B 529 ? B 532 ? 1 B A 21 1_555 B G 18 1_555 B C 22 1_555 B G 17 1_555 4.167 -1.659 2.930 1.708 13.355 54.320 -2.433 -4.365 2.607 14.381 -1.839 55.840 11 BB_A504C505:G500G501_BB B 504 ? B 501 ? B 505 ? B 500 ? 1 B C 22 1_555 B G 17 1_555 B A 23 1_555 B U 16 1_555 1.154 -1.673 3.423 -1.737 2.288 34.339 -3.187 -2.224 3.248 3.868 2.936 34.455 12 BB_C505A506:U499G500_BB B 505 ? B 500 ? B 506 ? B 499 ? 1 B A 23 1_555 B U 16 1_555 B G 24 1_555 B U 14 1_555 1.935 -1.114 3.071 -5.451 6.430 44.085 -1.974 -2.972 2.646 8.474 7.184 44.845 13 BB_A506G507:U497U499_BB B 506 ? B 499 ? B 507 ? B 497 ? 1 B G 24 1_555 B U 14 1_555 B C 25 1_555 B G 13 1_555 0.014 -1.152 3.144 -1.013 11.263 41.711 -2.583 -0.111 2.757 15.479 1.393 43.150 14 BB_G507C508:G496U497_BB B 507 ? B 497 ? B 508 ? B 496 ? 1 B C 25 1_555 B G 13 1_555 B G 26 1_555 B C 12 1_555 -0.566 -1.785 3.330 -1.807 16.970 28.956 -5.562 0.718 2.032 30.796 3.280 33.518 15 BB_C508G509:C495G496_BB B 508 ? B 496 ? B 509 ? B 495 ? 1 B G 26 1_555 B C 12 1_555 B C 27 1_555 B G 11 1_555 0.368 -1.584 3.190 1.191 9.893 32.414 -4.166 -0.457 2.619 17.222 -2.072 33.872 16 BB_G509C510:G494C495_BB B 509 ? B 495 ? B 510 ? B 494 ? 1 B C 27 1_555 B G 11 1_555 B C 28 1_555 B G 10 1_555 0.306 -1.949 3.294 1.318 7.059 29.943 -4.974 -0.335 2.783 13.421 -2.506 30.773 17 BB_C510C511:G493G494_BB B 510 ? B 494 ? B 511 ? B 493 ? 1 B C 28 1_555 B G 10 1_555 B A 29 1_555 B U 9 1_555 0.987 -2.410 3.354 1.383 5.128 27.249 -6.218 -1.736 2.906 10.756 -2.901 27.752 18 BB_C511A512:U492G493_BB B 511 ? B 493 ? B 512 ? B 492 ? 1 B A 29 1_555 B U 9 1_555 B A 30 1_555 B U 43 1_555 0.225 -2.427 3.428 1.637 5.730 36.065 -4.656 -0.134 3.027 9.177 -2.622 36.538 19 BB_A512A513:U526U492_BB B 512 ? B 492 ? B 513 ? B 526 ? 1 B A 30 1_555 B U 43 1_555 B G 31 1_555 B U 42 1_555 0.278 -2.043 2.845 -4.808 12.264 21.276 -7.282 -1.645 1.383 29.815 11.689 24.984 20 BB_A513G514:U525U526_BB B 513 ? B 526 ? B 514 ? B 525 ? 1 B G 31 1_555 B U 42 1_555 B U 32 1_555 B A 41 1_555 -0.352 -1.332 3.267 -3.598 2.416 39.632 -2.230 0.104 3.202 3.550 5.287 39.859 21 BB_G514U515:A524U525_BB B 514 ? B 525 ? B 515 ? B 524 ? 1 B U 32 1_555 B A 41 1_555 B U 33 1_555 B A 40 1_555 -0.054 -1.640 3.047 -0.477 6.397 30.186 -4.180 0.020 2.652 12.112 0.903 30.844 22 BB_U515U516:A523A524_BB B 515 ? B 524 ? B 516 ? B 523 ? 1 B U 33 1_555 B A 40 1_555 B C 34 1_555 B G 39 1_555 0.142 -1.858 3.234 1.271 5.326 32.399 -4.148 -0.045 2.903 9.461 -2.257 32.846 23 BB_U516C517:G522A523_BB B 516 ? B 523 ? B 517 ? B 522 ? 1 B C 34 1_555 B G 39 1_555 B U 35 1_555 B G 38 1_555 -1.606 -0.997 3.394 6.777 5.115 89.491 -0.812 1.278 3.244 3.626 -4.804 89.808 24 BB_C517U518:G521G522_BB B 517 ? B 522 ? B 518 ? B 521 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' P01GM022778 1 'Howard Hughes Medical Institute (HHMI)' 'United States' ? 2 # _atom_sites.entry_id 7K9D _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010120 _atom_sites.fract_transf_matrix[1][2] 0.005843 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011685 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005028 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CO N O P S # loop_