HEADER RNA-BINDING PROTEIN/RNA 29-SEP-20 7K9D TITLE CRYSTAL STRUCTURE OF BACILLUS HALODURANS OAPB IN COMPLEX WITH ITS OLE TITLE 2 RNA TARGET (CRYSTAL FORM I) COMPND MOL_ID: 1; COMPND 2 MOLECULE: OLE-ASSOCIATED PROTEIN B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OAPB; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: OLE* RNA; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS (STRAIN ATCC BAA-125 / DSM SOURCE 3 18197 / FERM 7344 / JCM 9153 / C-125); SOURCE 4 ORGANISM_TAXID: 272558; SOURCE 5 STRAIN: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125; SOURCE 6 GENE: BH0157; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS C-125; SOURCE 12 ORGANISM_TAXID: 272558 KEYWDS RIBONUCLEOPROTEIN COMPLEX, OLE RNA, NONCODING RNA, RNA, RNA-BINDING KEYWDS 2 PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.YANG,R.R.BREAKER REVDAT 3 06-MAR-24 7K9D 1 REMARK REVDAT 2 10-MAR-21 7K9D 1 JRNL REVDAT 1 03-MAR-21 7K9D 0 JRNL AUTH Y.YANG,K.A.HARRIS,D.L.WIDNER,R.R.BREAKER JRNL TITL STRUCTURE OF A BACTERIAL OAPB PROTEIN WITH ITS OLE RNA JRNL TITL 2 TARGET GIVES INSIGHTS INTO THE ARCHITECTURE OF THE OLE JRNL TITL 3 RIBONUCLEOPROTEIN COMPLEX. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 33619097 JRNL DOI 10.1073/PNAS.2020393118 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 42266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1143 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.8320 - 5.2832 0.99 2494 136 0.1412 0.1679 REMARK 3 2 5.2832 - 4.1947 1.00 2534 124 0.1243 0.1659 REMARK 3 3 4.1947 - 3.6648 1.00 2501 126 0.1316 0.1915 REMARK 3 4 3.6648 - 3.3299 1.00 2544 141 0.1445 0.2061 REMARK 3 5 3.3299 - 3.0913 1.00 2457 149 0.1573 0.1732 REMARK 3 6 3.0913 - 2.9091 1.00 2523 128 0.1759 0.1518 REMARK 3 7 2.9091 - 2.7634 1.00 2543 123 0.2220 0.2817 REMARK 3 8 2.7634 - 2.6432 1.00 2515 120 0.2306 0.2910 REMARK 3 9 2.6432 - 2.5414 1.00 2514 139 0.2356 0.2698 REMARK 3 10 2.5414 - 2.4537 1.00 2506 145 0.2302 0.2373 REMARK 3 11 2.4537 - 2.3770 1.00 2547 108 0.2180 0.2623 REMARK 3 12 2.3770 - 2.3091 1.00 2494 121 0.2356 0.2112 REMARK 3 13 2.3091 - 2.2483 1.00 2460 174 0.2654 0.2724 REMARK 3 14 2.2483 - 2.1934 1.00 2480 163 0.2743 0.2843 REMARK 3 15 2.1934 - 2.1436 1.00 2491 176 0.3026 0.3155 REMARK 3 16 2.1436 - 2.0980 0.98 2472 118 0.3300 0.4188 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 6:40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.311 36.350 117.951 REMARK 3 T TENSOR REMARK 3 T11: 0.4844 T22: 0.5962 REMARK 3 T33: 0.5698 T12: 0.0586 REMARK 3 T13: 0.0755 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 4.2896 L22: 7.9113 REMARK 3 L33: 9.2102 L12: -0.1147 REMARK 3 L13: 2.4774 L23: -0.7278 REMARK 3 S TENSOR REMARK 3 S11: 0.3052 S12: -0.4040 S13: -0.0212 REMARK 3 S21: 0.2185 S22: -0.1060 S23: 0.7035 REMARK 3 S31: -0.2593 S32: -1.2282 S33: -0.1786 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 41:65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.586 34.987 118.329 REMARK 3 T TENSOR REMARK 3 T11: 0.5826 T22: 0.5475 REMARK 3 T33: 0.5869 T12: 0.1153 REMARK 3 T13: 0.0555 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 4.5584 L22: 3.6464 REMARK 3 L33: 6.9346 L12: 1.5440 REMARK 3 L13: 1.7545 L23: -1.7953 REMARK 3 S TENSOR REMARK 3 S11: 0.1844 S12: -0.3659 S13: -0.1113 REMARK 3 S21: 0.4972 S22: -0.0749 S23: 0.1527 REMARK 3 S31: 0.4840 S32: -0.0489 S33: -0.1246 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 66:94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.346 31.275 130.287 REMARK 3 T TENSOR REMARK 3 T11: 0.8502 T22: 0.8092 REMARK 3 T33: 0.6583 T12: 0.0531 REMARK 3 T13: 0.0524 T23: 0.0808 REMARK 3 L TENSOR REMARK 3 L11: 7.3312 L22: 1.6610 REMARK 3 L33: 8.5810 L12: 0.3106 REMARK 3 L13: 1.7969 L23: 0.7339 REMARK 3 S TENSOR REMARK 3 S11: 0.3412 S12: -1.0911 S13: -0.3895 REMARK 3 S21: 1.0757 S22: -0.0688 S23: 0.3591 REMARK 3 S31: 0.8287 S32: -0.5096 S33: -0.2471 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 485:494 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.174 41.197 93.781 REMARK 3 T TENSOR REMARK 3 T11: 0.5487 T22: 0.7844 REMARK 3 T33: 0.6656 T12: 0.0410 REMARK 3 T13: 0.0833 T23: 0.0864 REMARK 3 L TENSOR REMARK 3 L11: 3.7971 L22: 1.6608 REMARK 3 L33: -0.0094 L12: -1.7084 REMARK 3 L13: 0.1384 L23: 0.4141 REMARK 3 S TENSOR REMARK 3 S11: 0.0748 S12: 0.5173 S13: 0.3315 REMARK 3 S21: -0.0815 S22: -0.0983 S23: 0.0461 REMARK 3 S31: -0.0336 S32: -0.0099 S33: 0.0078 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 495:509 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.996 34.298 102.669 REMARK 3 T TENSOR REMARK 3 T11: 0.4626 T22: 0.5953 REMARK 3 T33: 0.5821 T12: 0.0865 REMARK 3 T13: 0.0791 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 2.2983 L22: 2.9222 REMARK 3 L33: 1.3089 L12: -2.0109 REMARK 3 L13: -1.1098 L23: 1.9650 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: 0.0940 S13: -0.0625 REMARK 3 S21: 0.0668 S22: 0.0986 S23: -0.0693 REMARK 3 S31: 0.0810 S32: -0.0180 S33: -0.0944 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 510:514 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.760 25.953 85.826 REMARK 3 T TENSOR REMARK 3 T11: 0.7181 T22: 0.8522 REMARK 3 T33: 0.6480 T12: 0.0360 REMARK 3 T13: 0.0264 T23: -0.0910 REMARK 3 L TENSOR REMARK 3 L11: 4.3964 L22: 3.9753 REMARK 3 L33: 4.8597 L12: -0.6672 REMARK 3 L13: 1.9895 L23: -0.3091 REMARK 3 S TENSOR REMARK 3 S11: 0.4465 S12: 0.8669 S13: -0.5837 REMARK 3 S21: -0.8833 S22: 0.0009 S23: 0.0803 REMARK 3 S31: 0.2528 S32: -0.1272 S33: -0.3898 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN B AND RESID 515:524 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.592 35.627 73.980 REMARK 3 T TENSOR REMARK 3 T11: 0.7661 T22: 1.0312 REMARK 3 T33: 0.6110 T12: 0.1667 REMARK 3 T13: 0.1342 T23: 0.1225 REMARK 3 L TENSOR REMARK 3 L11: 4.8337 L22: 2.4755 REMARK 3 L33: 3.4336 L12: -0.8740 REMARK 3 L13: -1.2405 L23: 0.5569 REMARK 3 S TENSOR REMARK 3 S11: 0.1453 S12: 0.5740 S13: 0.3237 REMARK 3 S21: 0.1135 S22: -0.0978 S23: -0.0169 REMARK 3 S31: 0.4567 S32: -1.0340 S33: -0.0437 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN B AND RESID 525:529 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.017 39.526 82.228 REMARK 3 T TENSOR REMARK 3 T11: 0.9355 T22: 1.2341 REMARK 3 T33: 0.6463 T12: 0.1757 REMARK 3 T13: 0.1732 T23: 0.0681 REMARK 3 L TENSOR REMARK 3 L11: 7.2732 L22: 4.6023 REMARK 3 L33: 2.7691 L12: -0.8567 REMARK 3 L13: -3.0472 L23: 1.0571 REMARK 3 S TENSOR REMARK 3 S11: 0.2406 S12: 2.2524 S13: 0.2203 REMARK 3 S21: -1.1528 S22: -0.1747 S23: -0.1243 REMARK 3 S31: -0.4446 S32: -0.5279 S33: 0.0373 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN B AND RESID 530:534 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.816 49.867 79.799 REMARK 3 T TENSOR REMARK 3 T11: 1.8079 T22: 2.0741 REMARK 3 T33: 1.0391 T12: 0.4357 REMARK 3 T13: 0.2186 T23: 0.4617 REMARK 3 L TENSOR REMARK 3 L11: 7.7101 L22: 5.3968 REMARK 3 L33: 5.2733 L12: 4.6084 REMARK 3 L13: 1.3128 L23: -1.3784 REMARK 3 S TENSOR REMARK 3 S11: -0.7854 S12: 2.5670 S13: 0.9583 REMARK 3 S21: -3.0136 S22: 0.6159 S23: -0.6711 REMARK 3 S31: -1.3639 S32: 0.5059 S33: -0.0475 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 535:539 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.006 39.121 91.855 REMARK 3 T TENSOR REMARK 3 T11: 0.5115 T22: 1.0430 REMARK 3 T33: 0.6425 T12: 0.1517 REMARK 3 T13: -0.0138 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 5.4183 L22: 6.4014 REMARK 3 L33: 7.9555 L12: 1.5901 REMARK 3 L13: -2.1428 L23: -1.2025 REMARK 3 S TENSOR REMARK 3 S11: 0.3692 S12: 2.0965 S13: -0.4218 REMARK 3 S21: -1.0237 S22: -0.2242 S23: 0.6119 REMARK 3 S31: 0.0746 S32: -1.1569 S33: -0.0072 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN B AND RESID 540:543 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.168 47.103 104.969 REMARK 3 T TENSOR REMARK 3 T11: 0.5069 T22: 0.7171 REMARK 3 T33: 0.7156 T12: 0.1033 REMARK 3 T13: 0.0844 T23: 0.0769 REMARK 3 L TENSOR REMARK 3 L11: 1.4284 L22: 5.4464 REMARK 3 L33: 6.9154 L12: 0.4113 REMARK 3 L13: 2.8233 L23: -1.7881 REMARK 3 S TENSOR REMARK 3 S11: -0.4927 S12: 0.2486 S13: 0.2429 REMARK 3 S21: 0.5148 S22: 0.2360 S23: 0.5736 REMARK 3 S31: -0.3807 S32: 0.2402 S33: 0.3182 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7K9D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1000252114. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 - 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.6058 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42266 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.098 REMARK 200 RESOLUTION RANGE LOW (A) : 41.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.40 REMARK 200 R MERGE FOR SHELL (I) : 1.21100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES (PH 7.0 TO 7.5), 200 MM REMARK 280 NH4CL AND 39 TO 42.5% 2-METHYL-2,4-PENTANEDIOL (MPD), VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 49.40850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 28.52601 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 66.29900 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 49.40850 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 28.52601 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 66.29900 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 49.40850 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 28.52601 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 66.29900 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 49.40850 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 28.52601 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 66.29900 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 49.40850 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 28.52601 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 66.29900 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 49.40850 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 28.52601 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 66.29900 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 57.05202 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 132.59800 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 57.05202 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 132.59800 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 57.05202 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 132.59800 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 57.05202 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 132.59800 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 57.05202 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 132.59800 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 57.05202 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 132.59800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 352 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 354 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 858 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 5 REMARK 465 ALA A 95 REMARK 465 ASP A 96 REMARK 465 LEU A 97 REMARK 465 LEU A 98 REMARK 465 LYS A 99 REMARK 465 GLU A 100 REMARK 465 GLY A 101 REMARK 465 GLU A 102 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 33 -152.85 -155.98 REMARK 500 ASP A 43 -90.99 -121.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7K9B RELATED DB: PDB REMARK 900 ENTRY FROM THE SAME PAPER REMARK 900 RELATED ID: 7K9C RELATED DB: PDB REMARK 900 ENTRY FROM THE SAME PAPER DBREF 7K9D A 5 102 UNP Q9KGD7 Q9KGD7_BACHD 5 102 DBREF 7K9D B 484 543 PDB 7K9D 7K9D 484 543 SEQRES 1 A 98 GLY PRO SER PRO GLU ILE GLY GLN ILE VAL LYS ILE VAL SEQRES 2 A 98 LYS GLY ARG ASP ARG ASP GLN PHE SER VAL ILE ILE LYS SEQRES 3 A 98 ARG VAL ASP ASP ARG PHE VAL TYR ILE ALA ASP GLY ASP SEQRES 4 A 98 LYS ARG LYS VAL ASP ARG ALA LYS ARG LYS ASN MET ASN SEQRES 5 A 98 HIS LEU LYS LEU ILE ASP HIS ILE SER PRO GLU VAL ARG SEQRES 6 A 98 HIS SER PHE GLU GLU THR GLY LYS VAL THR ASN GLY LYS SEQRES 7 A 98 LEU ARG PHE ALA LEU LYS LYS PHE LEU GLU GLU HIS ALA SEQRES 8 A 98 ASP LEU LEU LYS GLU GLY GLU SEQRES 1 B 60 GTP G C C A G U C U G G C G SEQRES 2 B 60 U U U G G U G A C A G C G SEQRES 3 B 60 C C A A G U U C U U C G G SEQRES 4 B 60 A A U U G G G A A A U C C SEQRES 5 B 60 U A C U G G C C HET GTP B 484 32 HET MPD A 201 8 HET EPE B 601 15 HET NCO B 602 7 HET NCO B 603 7 HET NCO B 604 7 HET NCO B 605 7 HET NCO B 606 7 HET NCO B 607 7 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM NCO COBALT HEXAMMINE(III) HETSYN EPE HEPES FORMUL 2 GTP C10 H16 N5 O14 P3 FORMUL 3 MPD C6 H14 O2 FORMUL 4 EPE C8 H18 N2 O4 S FORMUL 5 NCO 6(CO H18 N6 3+) FORMUL 11 HOH *240(H2 O) HELIX 1 AA1 LYS A 46 ALA A 50 5 5 HELIX 2 AA2 SER A 65 GLY A 76 1 12 HELIX 3 AA3 THR A 79 HIS A 94 1 16 SHEET 1 AA1 5 LYS A 51 ASN A 54 0 SHEET 2 AA1 5 PHE A 36 ALA A 40 -1 N VAL A 37 O LYS A 53 SHEET 3 AA1 5 PHE A 25 ARG A 31 -1 N ILE A 29 O TYR A 38 SHEET 4 AA1 5 GLN A 12 ILE A 16 -1 N VAL A 14 O SER A 26 SHEET 5 AA1 5 LEU A 58 ILE A 64 -1 O HIS A 63 N ILE A 13 LINK O3' GTP B 484 P G B 485 1555 1555 1.60 CRYST1 98.817 98.817 198.897 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010120 0.005843 0.000000 0.00000 SCALE2 0.000000 0.011685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005028 0.00000