data_7KB4 # _entry.id 7KB4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 7KB4 WWPDB D_1000252160 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2021-01-27 _pdbx_database_PDB_obs_spr.pdb_id 7LA6 _pdbx_database_PDB_obs_spr.replace_pdb_id 7KB4 _pdbx_database_PDB_obs_spr.details 'Repalced by 7LA6' # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '1st wild type form' 4R7Q unspecified PDB '2nd wild type form' 7KB3 unspecified TargetTrack . IDP04043 unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7KB4 _pdbx_database_status.recvd_initial_deposition_date 2020-10-01 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Tan, K.' 1 0000-0002-4003-7903 'Wu, R.' 2 ? 'Jedrzejczak, R.' 3 ? 'Joachimiak, A.' 4 0000-0003-2535-6209 'Center for Structural Genomics of Infectious Diseases (CSGID)' 5 ? 'Center for Membrane Proteins of Infectious Diseases (MPID)' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;THE STRUCTURE OF A SENSOR DOMAIN OF A HISTIDINE KINASE (VxrA) FROM VIBRIO CHOLERAE O1 BIOVAR ELTOR STR. N16961, N239 deletion mutant ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tan, K.' 1 0000-0002-4003-7903 primary 'Wu, R.' 2 ? primary 'Jedrzejczak, R.' 3 ? primary 'Joachimiak, A.' 4 0000-0003-2535-6209 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7KB4 _cell.details ? _cell.formula_units_Z ? _cell.length_a 87.654 _cell.length_a_esd ? _cell.length_b 87.654 _cell.length_b_esd ? _cell.length_c 106.223 _cell.length_c_esd ? _cell.volume 816135.073 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KB4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sensor histidine kinase' 24764.877 1 ? 'N239 deletion mutant' ? ? 2 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 3 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 1 ? ? ? ? 4 non-polymer syn 'CACODYLATE ION' 136.989 2 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 6 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 7 water nat water 18.015 59 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNADSLPERIDLFVSLFDYNSATTSYDIRSIQTDFPTRLLTPDSMLPQTSEYPLKDIQLLYKLAQSCTGKLPLSPLITEP LVFTRSLCKGSSLSPRWFARSGLIHPGGGTYAFRYAEKYPAQFANLLPYMHIQERPNAAEGTLLYHLQNMGEDAINALVS GASMFGSGSDLWLRKGDIYYLFNEETWLTNANKAGLSYSLLSADTCFIQRGNICWDVEDHS ; _entity_poly.pdbx_seq_one_letter_code_can ;SNADSLPERIDLFVSLFDYNSATTSYDIRSIQTDFPTRLLTPDSMLPQTSEYPLKDIQLLYKLAQSCTGKLPLSPLITEP LVFTRSLCKGSSLSPRWFARSGLIHPGGGTYAFRYAEKYPAQFANLLPYMHIQERPNAAEGTLLYHLQNMGEDAINALVS GASMFGSGSDLWLRKGDIYYLFNEETWLTNANKAGLSYSLLSADTCFIQRGNICWDVEDHS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP04043 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 ASP n 1 5 SER n 1 6 LEU n 1 7 PRO n 1 8 GLU n 1 9 ARG n 1 10 ILE n 1 11 ASP n 1 12 LEU n 1 13 PHE n 1 14 VAL n 1 15 SER n 1 16 LEU n 1 17 PHE n 1 18 ASP n 1 19 TYR n 1 20 ASN n 1 21 SER n 1 22 ALA n 1 23 THR n 1 24 THR n 1 25 SER n 1 26 TYR n 1 27 ASP n 1 28 ILE n 1 29 ARG n 1 30 SER n 1 31 ILE n 1 32 GLN n 1 33 THR n 1 34 ASP n 1 35 PHE n 1 36 PRO n 1 37 THR n 1 38 ARG n 1 39 LEU n 1 40 LEU n 1 41 THR n 1 42 PRO n 1 43 ASP n 1 44 SER n 1 45 MET n 1 46 LEU n 1 47 PRO n 1 48 GLN n 1 49 THR n 1 50 SER n 1 51 GLU n 1 52 TYR n 1 53 PRO n 1 54 LEU n 1 55 LYS n 1 56 ASP n 1 57 ILE n 1 58 GLN n 1 59 LEU n 1 60 LEU n 1 61 TYR n 1 62 LYS n 1 63 LEU n 1 64 ALA n 1 65 GLN n 1 66 SER n 1 67 CYS n 1 68 THR n 1 69 GLY n 1 70 LYS n 1 71 LEU n 1 72 PRO n 1 73 LEU n 1 74 SER n 1 75 PRO n 1 76 LEU n 1 77 ILE n 1 78 THR n 1 79 GLU n 1 80 PRO n 1 81 LEU n 1 82 VAL n 1 83 PHE n 1 84 THR n 1 85 ARG n 1 86 SER n 1 87 LEU n 1 88 CYS n 1 89 LYS n 1 90 GLY n 1 91 SER n 1 92 SER n 1 93 LEU n 1 94 SER n 1 95 PRO n 1 96 ARG n 1 97 TRP n 1 98 PHE n 1 99 ALA n 1 100 ARG n 1 101 SER n 1 102 GLY n 1 103 LEU n 1 104 ILE n 1 105 HIS n 1 106 PRO n 1 107 GLY n 1 108 GLY n 1 109 GLY n 1 110 THR n 1 111 TYR n 1 112 ALA n 1 113 PHE n 1 114 ARG n 1 115 TYR n 1 116 ALA n 1 117 GLU n 1 118 LYS n 1 119 TYR n 1 120 PRO n 1 121 ALA n 1 122 GLN n 1 123 PHE n 1 124 ALA n 1 125 ASN n 1 126 LEU n 1 127 LEU n 1 128 PRO n 1 129 TYR n 1 130 MET n 1 131 HIS n 1 132 ILE n 1 133 GLN n 1 134 GLU n 1 135 ARG n 1 136 PRO n 1 137 ASN n 1 138 ALA n 1 139 ALA n 1 140 GLU n 1 141 GLY n 1 142 THR n 1 143 LEU n 1 144 LEU n 1 145 TYR n 1 146 HIS n 1 147 LEU n 1 148 GLN n 1 149 ASN n 1 150 MET n 1 151 GLY n 1 152 GLU n 1 153 ASP n 1 154 ALA n 1 155 ILE n 1 156 ASN n 1 157 ALA n 1 158 LEU n 1 159 VAL n 1 160 SER n 1 161 GLY n 1 162 ALA n 1 163 SER n 1 164 MET n 1 165 PHE n 1 166 GLY n 1 167 SER n 1 168 GLY n 1 169 SER n 1 170 ASP n 1 171 LEU n 1 172 TRP n 1 173 LEU n 1 174 ARG n 1 175 LYS n 1 176 GLY n 1 177 ASP n 1 178 ILE n 1 179 TYR n 1 180 TYR n 1 181 LEU n 1 182 PHE n 1 183 ASN n 1 184 GLU n 1 185 GLU n 1 186 THR n 1 187 TRP n 1 188 LEU n 1 189 THR n 1 190 ASN n 1 191 ALA n 1 192 ASN n 1 193 LYS n 1 194 ALA n 1 195 GLY n 1 196 LEU n 1 197 SER n 1 198 TYR n 1 199 SER n 1 200 LEU n 1 201 LEU n 1 202 SER n 1 203 ALA n 1 204 ASP n 1 205 THR n 1 206 CYS n 1 207 PHE n 1 208 ILE n 1 209 GLN n 1 210 ARG n 1 211 GLY n 1 212 ASN n 1 213 ILE n 1 214 CYS n 1 215 TRP n 1 216 ASP n 1 217 VAL n 1 218 GLU n 1 219 ASP n 1 220 HIS n 1 221 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 221 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene VC_A0565 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 39315 / El Tor Inaba N16961' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243277 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell 'BL21(DE3)-MAGI' _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG57 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9KM24_VIBCH _struct_ref.pdbx_db_accession Q9KM24 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DSLPERIDLFVSLFDYNSATTSYDIRSIQTDFPTRLLTPDSMLPQTSEYPLKDIQLLYKLAQSCTGKLPLSPLITEPLVF TRSLCKGSSLSPRWFARSGLIHPGGGTYAFRYAEKYPAQFANLLPYMHIQERPNAAEGTLLYHLQNMGEDAINALVSGAS MFGSGSDLWLRKGDIYYLFNEETWLTNANKAGLSYSLLSADNTCFIQRGNICWDVEDHS ; _struct_ref.pdbx_align_begin 38 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7KB4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 221 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9KM24 _struct_ref_seq.db_align_beg 38 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 256 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 38 _struct_ref_seq.pdbx_auth_seq_align_end 255 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7KB4 SER A 1 ? UNP Q9KM24 ? ? 'expression tag' 35 1 1 7KB4 ASN A 2 ? UNP Q9KM24 ? ? 'expression tag' 36 2 1 7KB4 ALA A 3 ? UNP Q9KM24 ? ? 'expression tag' 37 3 1 7KB4 ? A ? ? UNP Q9KM24 ASN 239 deletion ? 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CAC non-polymer . 'CACODYLATE ION' dimethylarsinate 'C2 H6 As O2 -1' 136.989 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7KB4 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.12 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 70.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.2 M Lithium Sulfide, 0.1 M Sodium Cacodylate:HCl, 30% (W/V) PEG 400 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-02-05 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 40.01 _reflns.entry_id 7KB4 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.98 _reflns.d_resolution_low 46.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 29036 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.0 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 42.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.027 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.98 _reflns_shell.d_res_low 2.03 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1416 _reflns_shell.percent_possible_all 99.8 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.787 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.302 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 49.34 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7KB4 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.98 _refine.ls_d_res_low 45.42 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28978 _refine.ls_number_reflns_R_free 1469 _refine.ls_number_reflns_R_work 27509 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.73 _refine.ls_percent_reflns_R_free 5.07 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1833 _refine.ls_R_factor_R_free 0.2084 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1819 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4R7Q _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.7788 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1745 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.98 _refine_hist.d_res_low 45.42 _refine_hist.number_atoms_solvent 59 _refine_hist.number_atoms_total 1827 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1725 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0117 ? 1816 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.6539 ? 2463 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.1149 ? 266 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0075 ? 314 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 28.2169 ? 259 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.98 2.05 . . 132 2374 87.56 . . . 0.2771 . 0.2356 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.05 2.14 . . 138 2751 99.97 . . . 0.2284 . 0.2165 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.14 2.23 . . 154 2735 100.00 . . . 0.2610 . 0.2020 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.23 2.35 . . 145 2729 99.97 . . . 0.2384 . 0.2031 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.35 2.50 . . 161 2747 100.00 . . . 0.2245 . 0.1922 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.50 2.69 . . 147 2767 99.97 . . . 0.2453 . 0.2053 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.69 2.96 . . 158 2763 100.00 . . . 0.2452 . 0.2101 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.96 3.39 . . 133 2810 99.90 . . . 0.2595 . 0.2103 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.39 4.27 . . 146 2841 99.90 . . . 0.1673 . 0.1631 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.27 45.42 . . 155 2992 99.81 . . . 0.1781 . 0.1564 . . . . . . . . . . . # _struct.entry_id 7KB4 _struct.title ;THE STRUCTURE OF A SENSOR DOMAIN OF A HISTIDINE KINASE (VxrA) FROM VIBRIO CHOLERAE O1 BIOVAR ELTOR STR. N16961, N239 deletion mutant ; _struct.pdbx_descriptor 'Sensor histidine kinase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7KB4 _struct_keywords.text ;VxrA, Two-component system, histidine kinase, sensor domain, Structural Genomics, Center for Membrane Proteins of Infectious Diseases, MPID, SIGNALING PROTEIN ; _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 2 ? ASP A 4 ? ASN A 36 ASP A 38 5 ? 3 HELX_P HELX_P2 AA2 SER A 5 ? LEU A 16 ? SER A 39 LEU A 50 1 ? 12 HELX_P HELX_P3 AA3 PHE A 17 ? ALA A 22 ? PHE A 51 ALA A 56 5 ? 6 HELX_P HELX_P4 AA4 ILE A 28 ? PHE A 35 ? ILE A 62 PHE A 69 1 ? 8 HELX_P HELX_P5 AA5 PRO A 36 ? LEU A 40 ? PRO A 70 LEU A 74 5 ? 5 HELX_P HELX_P6 AA6 THR A 41 ? LEU A 46 ? THR A 75 LEU A 80 5 ? 6 HELX_P HELX_P7 AA7 PRO A 53 ? CYS A 67 ? PRO A 87 CYS A 101 1 ? 15 HELX_P HELX_P8 AA8 SER A 74 ? LEU A 76 ? SER A 108 LEU A 110 5 ? 3 HELX_P HELX_P9 AA9 ILE A 77 ? GLY A 90 ? ILE A 111 GLY A 124 1 ? 14 HELX_P HELX_P10 AB1 SER A 94 ? ARG A 100 ? SER A 128 ARG A 134 1 ? 7 HELX_P HELX_P11 AB2 THR A 110 ? TYR A 119 ? THR A 144 TYR A 153 1 ? 10 HELX_P HELX_P12 AB3 GLN A 122 ? LEU A 127 ? GLN A 156 LEU A 161 1 ? 6 HELX_P HELX_P13 AB4 PRO A 128 ? MET A 130 ? PRO A 162 MET A 164 5 ? 3 HELX_P HELX_P14 AB5 HIS A 131 ? ARG A 135 ? HIS A 165 ARG A 169 5 ? 5 HELX_P HELX_P15 AB6 THR A 142 ? ASN A 149 ? THR A 176 ASN A 183 1 ? 8 HELX_P HELX_P16 AB7 GLY A 151 ? SER A 160 ? GLY A 185 SER A 194 1 ? 10 HELX_P HELX_P17 AB8 GLU A 184 ? GLY A 195 ? GLU A 218 GLY A 229 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 67 SG ? ? ? 1_555 A CYS 88 SG ? ? A CYS 101 A CYS 122 1_555 ? ? ? ? ? ? ? 2.075 ? ? disulf2 disulf ? ? A CYS 206 SG ? ? ? 1_555 A CYS 206 SG ? ? A CYS 240 A CYS 240 7_555 ? ? ? ? ? ? ? 2.113 ? ? disulf3 disulf ? ? A CYS 206 SG ? ? ? 1_555 A CYS 214 SG ? ? A CYS 240 A CYS 248 1_555 ? ? ? ? ? ? ? 2.048 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 24 ? ASP A 27 ? THR A 58 ASP A 61 AA1 2 ILE A 178 ? ASN A 183 ? ILE A 212 ASN A 217 AA1 3 ASP A 170 ? LYS A 175 ? ASP A 204 LYS A 209 AA1 4 MET A 164 ? SER A 167 ? MET A 198 SER A 201 AA2 1 ILE A 208 ? ARG A 210 ? ILE A 242 ARG A 244 AA2 2 ILE A 213 ? TRP A 215 ? ILE A 247 TRP A 249 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 24 ? N THR A 58 O LEU A 181 ? O LEU A 215 AA1 2 3 O PHE A 182 ? O PHE A 216 N LEU A 171 ? N LEU A 205 AA1 3 4 O TRP A 172 ? O TRP A 206 N PHE A 165 ? N PHE A 199 AA2 1 2 N ILE A 208 ? N ILE A 242 O TRP A 215 ? O TRP A 249 # _atom_sites.entry_id 7KB4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011408 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011408 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009414 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source AS ? ? 25.88022 7.02060 ? ? 1.67971 31.58991 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 35 ? ? ? A . n A 1 2 ASN 2 36 36 ASN ASN A . n A 1 3 ALA 3 37 37 ALA ALA A . n A 1 4 ASP 4 38 38 ASP ASP A . n A 1 5 SER 5 39 39 SER SER A . n A 1 6 LEU 6 40 40 LEU LEU A . n A 1 7 PRO 7 41 41 PRO PRO A . n A 1 8 GLU 8 42 42 GLU GLU A . n A 1 9 ARG 9 43 43 ARG ARG A . n A 1 10 ILE 10 44 44 ILE ILE A . n A 1 11 ASP 11 45 45 ASP ASP A . n A 1 12 LEU 12 46 46 LEU LEU A . n A 1 13 PHE 13 47 47 PHE PHE A . n A 1 14 VAL 14 48 48 VAL VAL A . n A 1 15 SER 15 49 49 SER SER A . n A 1 16 LEU 16 50 50 LEU LEU A . n A 1 17 PHE 17 51 51 PHE PHE A . n A 1 18 ASP 18 52 52 ASP ASP A . n A 1 19 TYR 19 53 53 TYR TYR A . n A 1 20 ASN 20 54 54 ASN ASN A . n A 1 21 SER 21 55 55 SER SER A . n A 1 22 ALA 22 56 56 ALA ALA A . n A 1 23 THR 23 57 57 THR THR A . n A 1 24 THR 24 58 58 THR THR A . n A 1 25 SER 25 59 59 SER SER A . n A 1 26 TYR 26 60 60 TYR TYR A . n A 1 27 ASP 27 61 61 ASP ASP A . n A 1 28 ILE 28 62 62 ILE ILE A . n A 1 29 ARG 29 63 63 ARG ARG A . n A 1 30 SER 30 64 64 SER SER A . n A 1 31 ILE 31 65 65 ILE ILE A . n A 1 32 GLN 32 66 66 GLN GLN A . n A 1 33 THR 33 67 67 THR THR A . n A 1 34 ASP 34 68 68 ASP ASP A . n A 1 35 PHE 35 69 69 PHE PHE A . n A 1 36 PRO 36 70 70 PRO PRO A . n A 1 37 THR 37 71 71 THR THR A . n A 1 38 ARG 38 72 72 ARG ARG A . n A 1 39 LEU 39 73 73 LEU LEU A . n A 1 40 LEU 40 74 74 LEU LEU A . n A 1 41 THR 41 75 75 THR THR A . n A 1 42 PRO 42 76 76 PRO PRO A . n A 1 43 ASP 43 77 77 ASP ASP A . n A 1 44 SER 44 78 78 SER SER A . n A 1 45 MET 45 79 79 MET MET A . n A 1 46 LEU 46 80 80 LEU LEU A . n A 1 47 PRO 47 81 81 PRO PRO A . n A 1 48 GLN 48 82 82 GLN GLN A . n A 1 49 THR 49 83 83 THR THR A . n A 1 50 SER 50 84 84 SER SER A . n A 1 51 GLU 51 85 85 GLU GLU A . n A 1 52 TYR 52 86 86 TYR TYR A . n A 1 53 PRO 53 87 87 PRO PRO A . n A 1 54 LEU 54 88 88 LEU LEU A . n A 1 55 LYS 55 89 89 LYS LYS A . n A 1 56 ASP 56 90 90 ASP ASP A . n A 1 57 ILE 57 91 91 ILE ILE A . n A 1 58 GLN 58 92 92 GLN GLN A . n A 1 59 LEU 59 93 93 LEU LEU A . n A 1 60 LEU 60 94 94 LEU LEU A . n A 1 61 TYR 61 95 95 TYR TYR A . n A 1 62 LYS 62 96 96 LYS LYS A . n A 1 63 LEU 63 97 97 LEU LEU A . n A 1 64 ALA 64 98 98 ALA ALA A . n A 1 65 GLN 65 99 99 GLN GLN A . n A 1 66 SER 66 100 100 SER SER A . n A 1 67 CYS 67 101 101 CYS CYS A . n A 1 68 THR 68 102 102 THR THR A . n A 1 69 GLY 69 103 103 GLY GLY A . n A 1 70 LYS 70 104 104 LYS LYS A . n A 1 71 LEU 71 105 105 LEU LEU A . n A 1 72 PRO 72 106 106 PRO PRO A . n A 1 73 LEU 73 107 107 LEU LEU A . n A 1 74 SER 74 108 108 SER SER A . n A 1 75 PRO 75 109 109 PRO PRO A . n A 1 76 LEU 76 110 110 LEU LEU A . n A 1 77 ILE 77 111 111 ILE ILE A . n A 1 78 THR 78 112 112 THR THR A . n A 1 79 GLU 79 113 113 GLU GLU A . n A 1 80 PRO 80 114 114 PRO PRO A . n A 1 81 LEU 81 115 115 LEU LEU A . n A 1 82 VAL 82 116 116 VAL VAL A . n A 1 83 PHE 83 117 117 PHE PHE A . n A 1 84 THR 84 118 118 THR THR A . n A 1 85 ARG 85 119 119 ARG ARG A . n A 1 86 SER 86 120 120 SER SER A . n A 1 87 LEU 87 121 121 LEU LEU A . n A 1 88 CYS 88 122 122 CYS CYS A . n A 1 89 LYS 89 123 123 LYS LYS A . n A 1 90 GLY 90 124 124 GLY GLY A . n A 1 91 SER 91 125 125 SER SER A . n A 1 92 SER 92 126 126 SER SER A . n A 1 93 LEU 93 127 127 LEU LEU A . n A 1 94 SER 94 128 128 SER SER A . n A 1 95 PRO 95 129 129 PRO PRO A . n A 1 96 ARG 96 130 130 ARG ARG A . n A 1 97 TRP 97 131 131 TRP TRP A . n A 1 98 PHE 98 132 132 PHE PHE A . n A 1 99 ALA 99 133 133 ALA ALA A . n A 1 100 ARG 100 134 134 ARG ARG A . n A 1 101 SER 101 135 135 SER SER A . n A 1 102 GLY 102 136 136 GLY GLY A . n A 1 103 LEU 103 137 137 LEU LEU A . n A 1 104 ILE 104 138 138 ILE ILE A . n A 1 105 HIS 105 139 139 HIS HIS A . n A 1 106 PRO 106 140 140 PRO PRO A . n A 1 107 GLY 107 141 141 GLY GLY A . n A 1 108 GLY 108 142 142 GLY GLY A . n A 1 109 GLY 109 143 143 GLY GLY A . n A 1 110 THR 110 144 144 THR THR A . n A 1 111 TYR 111 145 145 TYR TYR A . n A 1 112 ALA 112 146 146 ALA ALA A . n A 1 113 PHE 113 147 147 PHE PHE A . n A 1 114 ARG 114 148 148 ARG ARG A . n A 1 115 TYR 115 149 149 TYR TYR A . n A 1 116 ALA 116 150 150 ALA ALA A . n A 1 117 GLU 117 151 151 GLU GLU A . n A 1 118 LYS 118 152 152 LYS LYS A . n A 1 119 TYR 119 153 153 TYR TYR A . n A 1 120 PRO 120 154 154 PRO PRO A . n A 1 121 ALA 121 155 155 ALA ALA A . n A 1 122 GLN 122 156 156 GLN GLN A . n A 1 123 PHE 123 157 157 PHE PHE A . n A 1 124 ALA 124 158 158 ALA ALA A . n A 1 125 ASN 125 159 159 ASN ASN A . n A 1 126 LEU 126 160 160 LEU LEU A . n A 1 127 LEU 127 161 161 LEU LEU A . n A 1 128 PRO 128 162 162 PRO PRO A . n A 1 129 TYR 129 163 163 TYR TYR A . n A 1 130 MET 130 164 164 MET MET A . n A 1 131 HIS 131 165 165 HIS HIS A . n A 1 132 ILE 132 166 166 ILE ILE A . n A 1 133 GLN 133 167 167 GLN GLN A . n A 1 134 GLU 134 168 168 GLU GLU A . n A 1 135 ARG 135 169 169 ARG ARG A . n A 1 136 PRO 136 170 170 PRO PRO A . n A 1 137 ASN 137 171 171 ASN ASN A . n A 1 138 ALA 138 172 172 ALA ALA A . n A 1 139 ALA 139 173 173 ALA ALA A . n A 1 140 GLU 140 174 174 GLU GLU A . n A 1 141 GLY 141 175 175 GLY GLY A . n A 1 142 THR 142 176 176 THR THR A . n A 1 143 LEU 143 177 177 LEU LEU A . n A 1 144 LEU 144 178 178 LEU LEU A . n A 1 145 TYR 145 179 179 TYR TYR A . n A 1 146 HIS 146 180 180 HIS HIS A . n A 1 147 LEU 147 181 181 LEU LEU A . n A 1 148 GLN 148 182 182 GLN GLN A . n A 1 149 ASN 149 183 183 ASN ASN A . n A 1 150 MET 150 184 184 MET MET A . n A 1 151 GLY 151 185 185 GLY GLY A . n A 1 152 GLU 152 186 186 GLU GLU A . n A 1 153 ASP 153 187 187 ASP ASP A . n A 1 154 ALA 154 188 188 ALA ALA A . n A 1 155 ILE 155 189 189 ILE ILE A . n A 1 156 ASN 156 190 190 ASN ASN A . n A 1 157 ALA 157 191 191 ALA ALA A . n A 1 158 LEU 158 192 192 LEU LEU A . n A 1 159 VAL 159 193 193 VAL VAL A . n A 1 160 SER 160 194 194 SER SER A . n A 1 161 GLY 161 195 195 GLY GLY A . n A 1 162 ALA 162 196 196 ALA ALA A . n A 1 163 SER 163 197 197 SER SER A . n A 1 164 MET 164 198 198 MET MET A . n A 1 165 PHE 165 199 199 PHE PHE A . n A 1 166 GLY 166 200 200 GLY GLY A . n A 1 167 SER 167 201 201 SER SER A . n A 1 168 GLY 168 202 202 GLY GLY A . n A 1 169 SER 169 203 203 SER SER A . n A 1 170 ASP 170 204 204 ASP ASP A . n A 1 171 LEU 171 205 205 LEU LEU A . n A 1 172 TRP 172 206 206 TRP TRP A . n A 1 173 LEU 173 207 207 LEU LEU A . n A 1 174 ARG 174 208 208 ARG ARG A . n A 1 175 LYS 175 209 209 LYS LYS A . n A 1 176 GLY 176 210 210 GLY GLY A . n A 1 177 ASP 177 211 211 ASP ASP A . n A 1 178 ILE 178 212 212 ILE ILE A . n A 1 179 TYR 179 213 213 TYR TYR A . n A 1 180 TYR 180 214 214 TYR TYR A . n A 1 181 LEU 181 215 215 LEU LEU A . n A 1 182 PHE 182 216 216 PHE PHE A . n A 1 183 ASN 183 217 217 ASN ASN A . n A 1 184 GLU 184 218 218 GLU GLU A . n A 1 185 GLU 185 219 219 GLU GLU A . n A 1 186 THR 186 220 220 THR THR A . n A 1 187 TRP 187 221 221 TRP TRP A . n A 1 188 LEU 188 222 222 LEU LEU A . n A 1 189 THR 189 223 223 THR THR A . n A 1 190 ASN 190 224 224 ASN ASN A . n A 1 191 ALA 191 225 225 ALA ALA A . n A 1 192 ASN 192 226 226 ASN ASN A . n A 1 193 LYS 193 227 227 LYS LYS A . n A 1 194 ALA 194 228 228 ALA ALA A . n A 1 195 GLY 195 229 229 GLY GLY A . n A 1 196 LEU 196 230 230 LEU LEU A . n A 1 197 SER 197 231 231 SER SER A . n A 1 198 TYR 198 232 232 TYR TYR A . n A 1 199 SER 199 233 233 SER SER A . n A 1 200 LEU 200 234 234 LEU LEU A . n A 1 201 LEU 201 235 235 LEU LEU A . n A 1 202 SER 202 236 236 SER SER A . n A 1 203 ALA 203 237 237 ALA ALA A . n A 1 204 ASP 204 238 238 ASP ASP A . n A 1 205 THR 205 239 239 THR THR A . n A 1 206 CYS 206 240 240 CYS CYS A . n A 1 207 PHE 207 241 241 PHE PHE A . n A 1 208 ILE 208 242 242 ILE ILE A . n A 1 209 GLN 209 243 243 GLN GLN A . n A 1 210 ARG 210 244 244 ARG ARG A . n A 1 211 GLY 211 245 245 GLY GLY A . n A 1 212 ASN 212 246 246 ASN ASN A . n A 1 213 ILE 213 247 247 ILE ILE A . n A 1 214 CYS 214 248 248 CYS CYS A . n A 1 215 TRP 215 249 249 TRP TRP A . n A 1 216 ASP 216 250 250 ASP ASP A . n A 1 217 VAL 217 251 251 VAL VAL A . n A 1 218 GLU 218 252 252 GLU GLU A . n A 1 219 ASP 219 253 253 ASP ASP A . n A 1 220 HIS 220 254 254 HIS HIS A . n A 1 221 SER 221 255 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Membrane Proteins of Infectious Diseases' _pdbx_SG_project.initial_of_center MPID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEG 1 301 301 PEG PEG A . C 3 PG4 1 302 401 PG4 PG4 A . D 4 CAC 1 303 501 CAC CAC A . E 4 CAC 1 304 502 CAC CAC A . F 5 EDO 1 305 601 EDO EDO A . G 5 EDO 1 306 602 EDO EDO A . H 6 SO4 1 307 703 SO4 SO4 A . I 7 HOH 1 401 3 HOH HOH A . I 7 HOH 2 402 49 HOH HOH A . I 7 HOH 3 403 26 HOH HOH A . I 7 HOH 4 404 7 HOH HOH A . I 7 HOH 5 405 48 HOH HOH A . I 7 HOH 6 406 44 HOH HOH A . I 7 HOH 7 407 38 HOH HOH A . I 7 HOH 8 408 23 HOH HOH A . I 7 HOH 9 409 17 HOH HOH A . I 7 HOH 10 410 51 HOH HOH A . I 7 HOH 11 411 37 HOH HOH A . I 7 HOH 12 412 45 HOH HOH A . I 7 HOH 13 413 15 HOH HOH A . I 7 HOH 14 414 42 HOH HOH A . I 7 HOH 15 415 28 HOH HOH A . I 7 HOH 16 416 13 HOH HOH A . I 7 HOH 17 417 29 HOH HOH A . I 7 HOH 18 418 55 HOH HOH A . I 7 HOH 19 419 12 HOH HOH A . I 7 HOH 20 420 4 HOH HOH A . I 7 HOH 21 421 53 HOH HOH A . I 7 HOH 22 422 36 HOH HOH A . I 7 HOH 23 423 22 HOH HOH A . I 7 HOH 24 424 1 HOH HOH A . I 7 HOH 25 425 11 HOH HOH A . I 7 HOH 26 426 56 HOH HOH A . I 7 HOH 27 427 21 HOH HOH A . I 7 HOH 28 428 34 HOH HOH A . I 7 HOH 29 429 14 HOH HOH A . I 7 HOH 30 430 6 HOH HOH A . I 7 HOH 31 431 30 HOH HOH A . I 7 HOH 32 432 24 HOH HOH A . I 7 HOH 33 433 8 HOH HOH A . I 7 HOH 34 434 9 HOH HOH A . I 7 HOH 35 435 5 HOH HOH A . I 7 HOH 36 436 40 HOH HOH A . I 7 HOH 37 437 18 HOH HOH A . I 7 HOH 38 438 46 HOH HOH A . I 7 HOH 39 439 25 HOH HOH A . I 7 HOH 40 440 10 HOH HOH A . I 7 HOH 41 441 57 HOH HOH A . I 7 HOH 42 442 39 HOH HOH A . I 7 HOH 43 443 16 HOH HOH A . I 7 HOH 44 444 43 HOH HOH A . I 7 HOH 45 445 50 HOH HOH A . I 7 HOH 46 446 54 HOH HOH A . I 7 HOH 47 447 58 HOH HOH A . I 7 HOH 48 448 27 HOH HOH A . I 7 HOH 49 449 59 HOH HOH A . I 7 HOH 50 450 33 HOH HOH A . I 7 HOH 51 451 19 HOH HOH A . I 7 HOH 52 452 52 HOH HOH A . I 7 HOH 53 453 47 HOH HOH A . I 7 HOH 54 454 41 HOH HOH A . I 7 HOH 55 455 2 HOH HOH A . I 7 HOH 56 456 20 HOH HOH A . I 7 HOH 57 457 32 HOH HOH A . I 7 HOH 58 458 31 HOH HOH A . I 7 HOH 59 459 35 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5600 ? 1 MORE -38 ? 1 'SSA (A^2)' 23990 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-10-14 2 'Structure model' 1 1 2021-01-27 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Obsolete ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_database_PDB_obs_spr 2 2 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_database_status.status_code' 2 2 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 15.7630975692 14.1398406557 19.6018168296 0.458526884677 ? 0.0169975469252 ? -0.00176836792608 ? 0.274409624066 ? 0.090441031851 ? 0.335005916981 ? 3.78289770751 ? -3.43931256819 ? -0.828724719189 ? 3.23592636728 ? 1.64969377641 ? 2.94504631127 ? -0.0901658676704 ? -0.121911621065 ? -0.0408119295434 ? 0.85406670356 ? 0.213374220068 ? -0.183307847118 ? 0.472627415687 ? 0.0363999750363 ? -0.0203469663839 ? 2 'X-RAY DIFFRACTION' ? refined -0.954307051875 47.4644751328 11.005605465 0.309053852752 ? 0.0590033936532 ? -0.00366304587817 ? 0.291199595058 ? 0.0160106238879 ? 0.299002103481 ? 3.57163657678 ? -0.0794743204575 ? 1.21825340384 ? 3.04483580714 ? 0.210307090239 ? 5.33433241384 ? -0.120825171381 ? 0.0275666438003 ? 0.336333648069 ? -0.204019236084 ? 0.102647255627 ? 0.296984856561 ? -0.615560475266 ? -0.563111471839 ? 0.029967414467 ? 3 'X-RAY DIFFRACTION' ? refined 16.6837989783 24.4548005111 15.0727184121 0.37326784405 ? 0.0107567181654 ? -0.0346498757489 ? 0.240519901758 ? -0.00237763697015 ? 0.322085497023 ? 1.31522823529 ? -2.88232168213 ? -0.115513471929 ? 7.20434814506 ? 0.319182444193 ? 0.14173614648 ? -0.0552594019589 ? -0.0047863030153 ? 0.0154112791006 ? 0.128821595568 ? 0.0474198809463 ? -0.303145804791 ? 0.134445082244 ? 0.108702093227 ? -0.000829965748561 ? 4 'X-RAY DIFFRACTION' ? refined 10.9682422812 15.1986312282 -1.80328743162 0.400420886006 ? 0.0783392805554 ? 0.0183004595144 ? 0.387518711206 ? 0.0739741670951 ? 0.41643141786 ? 3.09261994285 ? -0.201094124914 ? 0.951003686268 ? 2.68601977525 ? -0.203186245976 ? 6.10154496372 ? -0.0799382642978 ? 0.0923646868405 ? 0.0797645735463 ? 0.355677234075 ? 0.028172218 ? 0.426126820956 ? -0.470312678041 ? -0.757351981952 ? 0.0203133614105 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 36 through 68 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 69 through 163 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 164 through 228 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 229 through 254 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? SBC-Collect ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 5 # _pdbx_entry_details.entry_id 7KB4 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 CYS _pdbx_validate_rmsd_angle.auth_seq_id_1 240 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 CYS _pdbx_validate_rmsd_angle.auth_seq_id_2 240 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 SG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 CYS _pdbx_validate_rmsd_angle.auth_seq_id_3 240 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.79 _pdbx_validate_rmsd_angle.angle_target_value 114.20 _pdbx_validate_rmsd_angle.angle_deviation 9.59 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 137 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 78.41 _pdbx_validate_torsion.psi -42.85 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 104 ? CG ? A LYS 70 CG 2 1 Y 1 A LYS 104 ? CD ? A LYS 70 CD 3 1 Y 1 A LYS 104 ? CE ? A LYS 70 CE 4 1 Y 1 A LYS 104 ? NZ ? A LYS 70 NZ 5 1 Y 1 A LEU 107 ? CG ? A LEU 73 CG 6 1 Y 1 A LEU 107 ? CD1 ? A LEU 73 CD1 7 1 Y 1 A LEU 107 ? CD2 ? A LEU 73 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 35 ? A SER 1 2 1 Y 1 A SER 255 ? A SER 221 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number HHSN272201700060C _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DI(HYDROXYETHYL)ETHER' PEG 3 'TETRAETHYLENE GLYCOL' PG4 4 'CACODYLATE ION' CAC 5 1,2-ETHANEDIOL EDO 6 'SULFATE ION' SO4 7 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 41 21 2' _space_group.name_Hall 'P 4abw 2nw' _space_group.IT_number 92 _space_group.crystal_system tetragonal _space_group.id 1 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z+1/4 3 y+1/2,-x+1/2,z+3/4 4 x+1/2,-y+1/2,-z+3/4 5 -x+1/2,y+1/2,-z+1/4 6 -x,-y,z+1/2 7 y,x,-z 8 -y,-x,-z+1/2 #