HEADER LIGASE 07-OCT-20 7KCP TITLE CRYSTAL STRUCTURE OF ACETYL-COA SYNTHETASE IN COMPLEX WITH ADENOSINE- TITLE 2 5'-PROPYLPHOSPHATE FROM COCCIDIOIDES POSADASII C735 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYL-COENZYME A SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 EC: 6.2.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COCCIDIOIDES POSADASII (STRAIN C735); SOURCE 3 ORGANISM_COMMON: VALLEY FEVER FUNGUS; SOURCE 4 ORGANISM_TAXID: 222929; SOURCE 5 STRAIN: C735; SOURCE 6 GENE: CPC735_049370; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEMB7013 KEYWDS SSGCID, COCCIDIOIDES POSADASII, ACETYL COENZYMEA SYNTHETASE, KEYWDS 2 STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 18-OCT-23 7KCP 1 REMARK REVDAT 1 21-OCT-20 7KCP 0 JRNL AUTH SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 2 (SSGCID),D.FOX III,J.ABENDROTH,N.D.DEBOUVER,D.J.KRYSAN, JRNL AUTH 3 D.D.LORIMER,P.S.HORANYI,T.E.EDWARDS JRNL TITL TO BE PUBLISHED JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 41145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.2600 - 5.1800 1.00 2851 144 0.1728 0.2122 REMARK 3 2 5.1800 - 4.1100 1.00 2811 145 0.1242 0.1432 REMARK 3 3 4.1100 - 3.5900 1.00 2795 142 0.1288 0.1726 REMARK 3 4 3.5900 - 3.2600 1.00 2814 138 0.1461 0.1669 REMARK 3 5 3.2600 - 3.0300 1.00 2797 137 0.1590 0.2043 REMARK 3 6 3.0300 - 2.8500 1.00 2820 139 0.1595 0.1900 REMARK 3 7 2.8500 - 2.7100 1.00 2780 142 0.1662 0.1946 REMARK 3 8 2.7100 - 2.5900 1.00 2778 145 0.1635 0.2057 REMARK 3 9 2.5900 - 2.4900 1.00 2774 142 0.1626 0.2418 REMARK 3 10 2.4900 - 2.4100 1.00 2814 142 0.1631 0.2318 REMARK 3 11 2.4100 - 2.3300 1.00 2768 144 0.1659 0.2248 REMARK 3 12 2.3300 - 2.2600 1.00 2788 142 0.1752 0.1918 REMARK 3 13 2.2600 - 2.2000 1.00 2787 146 0.1851 0.2490 REMARK 3 14 2.2000 - 2.1500 1.00 2780 140 0.1975 0.2511 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 25:252 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.778 39.668 -1.225 REMARK 3 T TENSOR REMARK 3 T11: 0.1590 T22: 0.2251 REMARK 3 T33: 0.2166 T12: -0.0126 REMARK 3 T13: -0.0057 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 0.9276 L22: 2.8093 REMARK 3 L33: 1.2934 L12: -0.3095 REMARK 3 L13: 0.0731 L23: -0.3511 REMARK 3 S TENSOR REMARK 3 S11: -0.0297 S12: -0.0390 S13: 0.0963 REMARK 3 S21: -0.0041 S22: -0.0235 S23: -0.5157 REMARK 3 S31: 0.0633 S32: 0.0977 S33: 0.0135 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 253:469 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.754 44.427 -0.552 REMARK 3 T TENSOR REMARK 3 T11: 0.1960 T22: 0.2234 REMARK 3 T33: 0.3711 T12: -0.0226 REMARK 3 T13: -0.0232 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 1.0731 L22: 2.3816 REMARK 3 L33: 0.8025 L12: -0.4167 REMARK 3 L13: -0.0207 L23: -0.1114 REMARK 3 S TENSOR REMARK 3 S11: -0.0273 S12: -0.0227 S13: 0.2524 REMARK 3 S21: 0.0516 S22: 0.0012 S23: -0.7780 REMARK 3 S31: -0.0546 S32: 0.1223 S33: 0.0314 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 470:557 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.067 21.647 1.687 REMARK 3 T TENSOR REMARK 3 T11: 0.2736 T22: 0.2363 REMARK 3 T33: 0.4884 T12: 0.0337 REMARK 3 T13: -0.0387 T23: 0.0489 REMARK 3 L TENSOR REMARK 3 L11: 3.4733 L22: 1.9186 REMARK 3 L33: 3.4984 L12: 0.1565 REMARK 3 L13: 1.4791 L23: 1.1877 REMARK 3 S TENSOR REMARK 3 S11: 0.0721 S12: 0.1291 S13: -0.3221 REMARK 3 S21: 0.1542 S22: 0.1000 S23: -0.8205 REMARK 3 S31: 0.3071 S32: 0.4988 S33: -0.1407 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 558:616 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.580 32.600 -25.189 REMARK 3 T TENSOR REMARK 3 T11: 1.0053 T22: 1.3092 REMARK 3 T33: 0.8727 T12: 0.0440 REMARK 3 T13: 0.3525 T23: -0.0586 REMARK 3 L TENSOR REMARK 3 L11: 3.7452 L22: 1.9784 REMARK 3 L33: 1.5634 L12: -0.0638 REMARK 3 L13: -1.3344 L23: -1.3594 REMARK 3 S TENSOR REMARK 3 S11: -0.0339 S12: 0.1458 S13: 0.3487 REMARK 3 S21: -0.4829 S22: -0.0819 S23: -0.2221 REMARK 3 S31: 0.2160 S32: 0.9368 S33: 0.0697 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KCP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1000252274. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41158 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.58100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5IFI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RIGAKUREAGENTS MORPHEUS SCREEN, A6:10% REMARK 280 W/V PEG 8000, 20% V/V ETHYLENE GLYCOL, 0.03M DIVALENT CATIONS REMARK 280 (MGCL2, CACL2), 0.1M MOPS/HEPES-NA PH7.5; REMARK 280 COPOA.00629.A.FS11.PD00403 AT 10 MG/ML, 1MM TCEP, 1MM BSI5663/ REMARK 280 PROPYL-AMP; CRYO: DIRECT; TRAY 313285A6, PUCK EJJ3-4, PH 7.50, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 58.08500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.08500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.08500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 GLU A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 PRO A 7 REMARK 465 LYS A 8 REMARK 465 VAL A 568 REMARK 465 PRO A 569 REMARK 465 ASP A 570 REMARK 465 PRO A 571 REMARK 465 LEU A 572 REMARK 465 THR A 573 REMARK 465 GLY A 574 REMARK 465 GLN A 575 REMARK 465 LYS A 584 REMARK 465 SER A 585 REMARK 465 GLY A 586 REMARK 465 ASN A 587 REMARK 465 ASP A 588 REMARK 465 ILE A 617 REMARK 465 ASP A 618 REMARK 465 ASP A 619 REMARK 465 LEU A 620 REMARK 465 PRO A 621 REMARK 465 LYS A 622 REMARK 465 THR A 623 REMARK 465 ARG A 624 REMARK 465 SER A 625 REMARK 465 GLY A 626 REMARK 465 LYS A 627 REMARK 465 ILE A 628 REMARK 465 MET A 629 REMARK 465 ARG A 630 REMARK 465 ARG A 631 REMARK 465 ILE A 632 REMARK 465 LEU A 633 REMARK 465 ARG A 634 REMARK 465 LYS A 635 REMARK 465 ILE A 636 REMARK 465 LEU A 637 REMARK 465 SER A 638 REMARK 465 GLY A 639 REMARK 465 GLU A 640 REMARK 465 GLU A 641 REMARK 465 ASP A 642 REMARK 465 SER A 643 REMARK 465 LEU A 644 REMARK 465 GLY A 645 REMARK 465 ASP A 646 REMARK 465 ILE A 647 REMARK 465 SER A 648 REMARK 465 THR A 649 REMARK 465 LEU A 650 REMARK 465 SER A 651 REMARK 465 ASP A 652 REMARK 465 PRO A 653 REMARK 465 SER A 654 REMARK 465 VAL A 655 REMARK 465 VAL A 656 REMARK 465 ASN A 657 REMARK 465 LYS A 658 REMARK 465 ILE A 659 REMARK 465 ILE A 660 REMARK 465 ASP A 661 REMARK 465 THR A 662 REMARK 465 PHE A 663 REMARK 465 HIS A 664 REMARK 465 GLU A 665 REMARK 465 TRP A 666 REMARK 465 LYS A 667 REMARK 465 ARG A 668 REMARK 465 ALA A 669 REMARK 465 MET A 670 REMARK 465 ALA A 671 REMARK 465 ALA A 672 REMARK 465 ALA A 673 REMARK 465 ALA A 674 REMARK 465 ALA A 675 REMARK 465 ALA A 676 REMARK 465 ALA A 677 REMARK 465 ALA A 678 REMARK 465 ALA A 679 REMARK 465 VAL A 680 REMARK 465 SER A 681 REMARK 465 ALA A 682 REMARK 465 THR A 683 REMARK 465 ALA A 684 REMARK 465 PRO A 685 REMARK 465 PRO A 686 REMARK 465 ASN A 687 REMARK 465 SER A 688 REMARK 465 THR A 689 REMARK 465 THR A 690 REMARK 465 GLY A 691 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 16 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 17 CG CD OE1 NE2 REMARK 470 ASP A 19 CG OD1 OD2 REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 ARG A 106 CG CD NE CZ NH1 NH2 REMARK 470 SER A 283 OG REMARK 470 THR A 284 OG1 CG2 REMARK 470 LYS A 286 CG CD CE NZ REMARK 470 LYS A 411 CG CD CE NZ REMARK 470 ASP A 535 CG OD1 OD2 REMARK 470 ASN A 538 CG OD1 ND2 REMARK 470 GLU A 555 CG CD OE1 OE2 REMARK 470 HIS A 557 CG ND1 CD2 CE1 NE2 REMARK 470 CYS A 558 SG REMARK 470 GLU A 561 CG CD OE1 OE2 REMARK 470 VAL A 577 CG1 CG2 REMARK 470 PHE A 580 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 583 CG CD1 CD2 REMARK 470 ASN A 589 CG OD1 ND2 REMARK 470 ARG A 590 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 591 CG CD OE1 OE2 REMARK 470 LEU A 593 CG CD1 CD2 REMARK 470 ARG A 594 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 595 CG CD CE NZ REMARK 470 LEU A 597 CG CD1 CD2 REMARK 470 ILE A 598 CG1 CG2 CD1 REMARK 470 MET A 599 CG SD CE REMARK 470 ARG A 602 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 603 CG CD CE NZ REMARK 470 LYS A 612 CG CD CE NZ REMARK 470 VAL A 613 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 363 O HOH A 801 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 100 -67.71 -132.89 REMARK 500 ASP A 107 71.72 -151.43 REMARK 500 HIS A 122 -148.95 -106.90 REMARK 500 THR A 294 -64.81 -97.55 REMARK 500 VAL A 333 -74.44 -105.75 REMARK 500 ASN A 389 68.00 -151.29 REMARK 500 TRP A 429 -175.09 -174.83 REMARK 500 THR A 439 148.00 -171.58 REMARK 500 ILE A 444 -53.34 -133.28 REMARK 500 SER A 453 -118.46 74.45 REMARK 500 ASP A 534 -166.91 -100.39 REMARK 500 ALA A 560 -68.74 -104.96 REMARK 500 ILE A 605 -70.47 -126.94 REMARK 500 PHE A 608 1.63 -69.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 702 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 225 O REMARK 620 2 HOH A 935 O 72.2 REMARK 620 3 HOH A1049 O 83.1 77.9 REMARK 620 4 HOH A1069 O 71.8 136.6 74.4 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-COPOA.00629.A RELATED DB: TARGETTRACK DBREF 7KCP A 1 691 UNP C5PGB4 C5PGB4_COCP7 2 691 SEQADV 7KCP MET A -15 UNP C5PGB4 INITIATING METHIONINE SEQADV 7KCP HIS A -14 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP HIS A -13 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP HIS A -12 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP HIS A -11 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP HIS A -10 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP HIS A -9 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP HIS A -8 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP HIS A -7 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP GLU A -6 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP ASN A -5 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP LEU A -4 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP TYR A -3 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP PHE A -2 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP GLN A -1 UNP C5PGB4 EXPRESSION TAG SEQADV 7KCP GLY A 0 UNP C5PGB4 EXPRESSION TAG SEQRES 1 A 706 MET HIS HIS HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR SEQRES 2 A 706 PHE GLN GLY SER GLU THR PRO ALA GLU PRO LYS PRO PRO SEQRES 3 A 706 VAL VAL VAL GLU ALA HIS GLN VAL ASP THR PHE ASP VAL SEQRES 4 A 706 PRO GLY VAL PHE TYR GLU ASN HIS PRO HIS GLU PRO HIS SEQRES 5 A 706 LEU SER GLY MET ASN GLU TYR ASN GLN LEU TYR GLN GLN SEQRES 6 A 706 SER ILE ASN ASP PRO ASP THR PHE TRP ALA ARG MET ALA SEQRES 7 A 706 ARG ASP LEU ILE THR PHE GLU LYS ASP PHE ASP LYS THR SEQRES 8 A 706 HIS ILE GLY THR LEU GLU GLY GLY ASP ASN ALA TRP PHE SEQRES 9 A 706 VAL GLY GLY ARG LEU ASN ALA SER PHE ASN CYS VAL ASP SEQRES 10 A 706 ARG HIS ALA MET ARG ASP PRO ASN LYS VAL ALA ILE ILE SEQRES 11 A 706 TYR GLU ALA ASP GLU PRO GLY HIS GLY ARG SER ILE THR SEQRES 12 A 706 TYR ALA GLU LEU LEU LYS GLU VAL SER ARG LEU ALA TRP SEQRES 13 A 706 VAL MET LYS SER GLN GLY VAL ARG ARG GLY ASP THR VAL SEQRES 14 A 706 ALA ILE TYR LEU PRO MET ILE PRO GLU ALA ILE PHE ALA SEQRES 15 A 706 LEU LEU ALA CYS ALA ARG ILE GLY ALA ILE HIS SER VAL SEQRES 16 A 706 VAL PHE ALA GLY PHE SER SER ASP SER LEU ARG ASP ARG SEQRES 17 A 706 THR LEU ASP ALA ARG SER LYS PHE ILE ILE THR THR ASP SEQRES 18 A 706 GLU GLY LYS ARG GLY GLY LYS VAL ILE GLY THR LYS LYS SEQRES 19 A 706 ILE VAL ASP GLU ALA LEU LYS GLN CYS PRO ASP VAL THR SEQRES 20 A 706 SER CYS LEU VAL PHE LYS ARG THR GLY ALA ASP VAL PRO SEQRES 21 A 706 TRP THR LYS GLY ARG ASP LEU TRP TRP HIS GLU GLU VAL SEQRES 22 A 706 GLU LYS TYR PRO ASN TYR LEU PRO ALA GLU SER MET ASP SEQRES 23 A 706 SER GLU ASP PRO LEU PHE LEU LEU TYR THR SER GLY SER SEQRES 24 A 706 THR GLY LYS PRO LYS GLY VAL MET HIS THR THR ALA GLY SEQRES 25 A 706 TYR LEU VAL GLY ALA ALA ALA THR GLY LYS TYR VAL PHE SEQRES 26 A 706 ASP ILE HIS PRO ALA ASP ARG PHE PHE CYS GLY GLY ASP SEQRES 27 A 706 VAL GLY TRP ILE THR GLY HIS THR TYR VAL VAL TYR ALA SEQRES 28 A 706 PRO LEU LEU LEU GLY CYS THR THR VAL VAL PHE GLU SER SEQRES 29 A 706 THR PRO ALA TYR PRO ASN PHE SER ARG TYR TRP ASP VAL SEQRES 30 A 706 ILE GLU LYS HIS LYS VAL THR GLN PHE TYR VAL ALA PRO SEQRES 31 A 706 THR ALA LEU ARG LEU LEU LYS ARG ALA GLY ASP HIS HIS SEQRES 32 A 706 ILE ASN HIS GLU MET LYS ASP LEU ARG ILE LEU GLY SER SEQRES 33 A 706 VAL GLY GLU PRO ILE ALA ALA GLU VAL TRP LYS TRP TYR SEQRES 34 A 706 HIS GLU VAL VAL GLY LYS ARG GLN ALA HIS ILE VAL ASP SEQRES 35 A 706 THR TYR TRP GLN THR GLU THR GLY SER HIS VAL ILE THR SEQRES 36 A 706 PRO LEU GLY GLY ILE THR PRO THR LYS PRO GLY SER ALA SEQRES 37 A 706 SER LEU PRO PHE PHE GLY ILE ASP PRO VAL ILE LEU ASP SEQRES 38 A 706 PRO VAL THR GLY ALA GLU ILE PRO GLY ASN ASP VAL GLU SEQRES 39 A 706 GLY ILE LEU ALA PHE ARG LYS PRO TRP PRO SER MET ALA SEQRES 40 A 706 ARG THR VAL TRP GLY ASP HIS LYS ARG TYR MET ASP THR SEQRES 41 A 706 TYR LEU ASN VAL TYR LYS GLY PHE TYR PHE THR GLY ASP SEQRES 42 A 706 GLY ALA GLY ARG ASP HIS GLU GLY TYR TYR TRP ILE ARG SEQRES 43 A 706 GLY ARG VAL ASP ASP VAL VAL ASN VAL SER GLY HIS ARG SEQRES 44 A 706 LEU SER THR ALA GLU ILE GLU ALA ALA LEU ILE GLU HIS SEQRES 45 A 706 HIS CYS VAL ALA GLU ALA ALA VAL VAL GLY VAL PRO ASP SEQRES 46 A 706 PRO LEU THR GLY GLN ALA VAL HIS ALA PHE VAL ALA LEU SEQRES 47 A 706 LYS SER GLY ASN ASP ASN ARG GLU GLN LEU ARG LYS GLU SEQRES 48 A 706 LEU ILE MET GLN VAL ARG LYS SER ILE GLY PRO PHE ALA SEQRES 49 A 706 ALA PRO LYS VAL VAL PHE VAL ILE ASP ASP LEU PRO LYS SEQRES 50 A 706 THR ARG SER GLY LYS ILE MET ARG ARG ILE LEU ARG LYS SEQRES 51 A 706 ILE LEU SER GLY GLU GLU ASP SER LEU GLY ASP ILE SER SEQRES 52 A 706 THR LEU SER ASP PRO SER VAL VAL ASN LYS ILE ILE ASP SEQRES 53 A 706 THR PHE HIS GLU TRP LYS ARG ALA MET ALA ALA ALA ALA SEQRES 54 A 706 ALA ALA ALA ALA ALA VAL SER ALA THR ALA PRO PRO ASN SEQRES 55 A 706 SER THR THR GLY HET PRX A 701 26 HET MG A 702 1 HET EDO A 703 4 HET EDO A 704 4 HET EDO A 705 4 HET EDO A 706 4 HET EDO A 707 4 HET EDO A 708 4 HET EDO A 709 4 HET EDO A 710 4 HET EDO A 711 4 HET EDO A 712 4 HET EDO A 713 4 HETNAM PRX ADENOSINE-5'-MONOPHOSPHATE-PROPYL ESTER HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN PRX ADENOSINE-5'-PROPYLPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PRX C13 H20 N5 O7 P FORMUL 3 MG MG 2+ FORMUL 4 EDO 11(C2 H6 O2) FORMUL 15 HOH *366(H2 O) HELIX 1 AA1 VAL A 12 HIS A 16 5 5 HELIX 2 AA2 PRO A 24 HIS A 31 1 8 HELIX 3 AA3 GLY A 39 ASP A 53 1 15 HELIX 4 AA4 ASP A 53 ILE A 66 1 14 HELIX 5 AA5 ASN A 94 VAL A 100 1 7 HELIX 6 AA6 VAL A 100 ASP A 107 1 8 HELIX 7 AA7 TYR A 128 GLN A 145 1 18 HELIX 8 AA8 ILE A 160 GLY A 174 1 15 HELIX 9 AA9 SER A 185 ARG A 197 1 13 HELIX 10 AB1 GLY A 215 LYS A 225 1 11 HELIX 11 AB2 TRP A 253 GLU A 258 1 6 HELIX 12 AB3 THR A 294 VAL A 308 1 15 HELIX 13 AB4 TRP A 325 VAL A 332 1 8 HELIX 14 AB5 VAL A 333 GLY A 340 1 8 HELIX 15 AB6 SER A 356 LYS A 366 1 11 HELIX 16 AB7 ALA A 373 GLY A 384 1 12 HELIX 17 AB8 ASP A 385 ILE A 388 5 4 HELIX 18 AB9 ALA A 406 VAL A 416 1 11 HELIX 19 AC1 GLN A 430 GLY A 434 5 5 HELIX 20 AC2 ASP A 497 LEU A 506 1 10 HELIX 21 AC3 THR A 546 GLU A 555 1 10 HELIX 22 AC4 ARG A 590 ILE A 605 1 16 HELIX 23 AC5 GLY A 606 ALA A 610 5 5 SHEET 1 AA1 2 LYS A 74 ILE A 77 0 SHEET 2 AA1 2 ALA A 86 VAL A 89 -1 O PHE A 88 N THR A 75 SHEET 1 AA2 2 ARG A 92 LEU A 93 0 SHEET 2 AA2 2 MET A 269 ASP A 270 -1 O MET A 269 N LEU A 93 SHEET 1 AA3 7 ARG A 124 THR A 127 0 SHEET 2 AA3 7 VAL A 111 GLU A 116 -1 N TYR A 115 O ARG A 124 SHEET 3 AA3 7 THR A 342 PHE A 346 1 O VAL A 345 N GLU A 116 SHEET 4 AA3 7 ARG A 316 CYS A 319 1 N PHE A 317 O THR A 342 SHEET 5 AA3 7 GLN A 369 VAL A 372 1 O GLN A 369 N PHE A 318 SHEET 6 AA3 7 ILE A 397 VAL A 401 1 O GLY A 399 N PHE A 370 SHEET 7 AA3 7 HIS A 423 THR A 427 1 O HIS A 423 N LEU A 398 SHEET 1 AA4 8 ASP A 250 TRP A 252 0 SHEET 2 AA4 8 SER A 232 PHE A 236 1 N VAL A 235 O LEU A 251 SHEET 3 AA4 8 PHE A 200 THR A 204 1 N THR A 203 O PHE A 236 SHEET 4 AA4 8 THR A 152 TYR A 156 1 N TYR A 156 O ILE A 202 SHEET 5 AA4 8 ILE A 176 VAL A 179 1 O SER A 178 N VAL A 153 SHEET 6 AA4 8 PRO A 274 THR A 280 1 O LEU A 277 N HIS A 177 SHEET 7 AA4 8 LYS A 288 THR A 293 -1 O HIS A 292 N LEU A 275 SHEET 8 AA4 8 THR A 493 VAL A 494 -1 O THR A 493 N MET A 291 SHEET 1 AA5 2 GLY A 207 ARG A 209 0 SHEET 2 AA5 2 LYS A 212 ILE A 214 -1 O ILE A 214 N GLY A 207 SHEET 1 AA6 4 PRO A 461 LEU A 464 0 SHEET 2 AA6 4 VAL A 477 PHE A 483 -1 O ALA A 482 N VAL A 462 SHEET 3 AA6 4 TYR A 513 ARG A 521 -1 O ALA A 519 N GLY A 479 SHEET 4 AA6 4 TYR A 527 ARG A 532 -1 O ARG A 530 N GLY A 518 SHEET 1 AA7 2 VAL A 536 VAL A 539 0 SHEET 2 AA7 2 HIS A 542 SER A 545 -1 O LEU A 544 N VAL A 537 SHEET 1 AA8 3 GLU A 561 VAL A 565 0 SHEET 2 AA8 3 HIS A 578 ALA A 582 -1 O HIS A 578 N VAL A 565 SHEET 3 AA8 3 VAL A 614 PHE A 615 1 O PHE A 615 N ALA A 579 LINK O LYS A 225 MG MG A 702 1555 1555 2.73 LINK MG MG A 702 O HOH A 935 1555 1555 2.68 LINK MG MG A 702 O HOH A1049 1555 4564 2.25 LINK MG MG A 702 O HOH A1069 1555 1555 2.47 CISPEP 1 TYR A 352 PRO A 353 0 -0.62 CRYST1 107.170 107.170 116.170 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009331 0.005387 0.000000 0.00000 SCALE2 0.000000 0.010774 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008608 0.00000