HEADER TOXIN 07-OCT-20 7KD2 TITLE RICIN BOUND TO VHH ANTIBODY V11B2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RICIN CHAIN A; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.2.22; COMPND 5 OTHER_DETAILS: GLYCOSIDASE; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: RICIN CHAIN B; COMPND 8 CHAIN: B; COMPND 9 EC: 3.2.2.22; COMPND 10 OTHER_DETAILS: LECTIN; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: VHH ANTIBODY V11B2; COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES; COMPND 15 OTHER_DETAILS: VHH ANTIBODY SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS; SOURCE 3 ORGANISM_COMMON: CASTOR BEAN; SOURCE 4 ORGANISM_TAXID: 3988; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS; SOURCE 7 ORGANISM_COMMON: CASTOR BEAN; SOURCE 8 ORGANISM_TAXID: 3988; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 11 ORGANISM_TAXID: 30538; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RIBOSOME INACTIVATIONG PROTEIN, VHH ANTIBODY, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.RUDOLPH REVDAT 2 18-OCT-23 7KD2 1 REMARK REVDAT 1 04-AUG-21 7KD2 0 JRNL AUTH M.J.RUDOLPH,A.Y.POON,S.KAVALIAUSKIENE,A.G.MYRANN, JRNL AUTH 2 C.REYNOLDS-PETERSON,S.A.DAVIS,K.SANDVIG,D.J.VANCE,N.J.MANTIS JRNL TITL STRUCTURAL ANALYSIS OF TOXIN-NEUTRALIZING, SINGLE-DOMAIN JRNL TITL 2 ANTIBODIES THAT BRIDGE RICIN'S A-B SUBUNIT INTERFACE. JRNL REF J.MOL.BIOL. V. 433 67086 2021 JRNL REFN ESSN 1089-8638 JRNL PMID 34089718 JRNL DOI 10.1016/J.JMB.2021.167086 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 28735 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1454 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.1890 - 5.4708 1.00 2912 155 0.1945 0.2161 REMARK 3 2 5.4708 - 4.3488 0.99 2789 126 0.1819 0.2262 REMARK 3 3 4.3488 - 3.8010 0.99 2730 149 0.1991 0.2370 REMARK 3 4 3.8010 - 3.4543 1.00 2712 164 0.2162 0.2937 REMARK 3 5 3.4543 - 3.2072 1.00 2707 148 0.2478 0.3206 REMARK 3 6 3.2072 - 3.0184 1.00 2679 164 0.2707 0.3484 REMARK 3 7 3.0184 - 2.8674 1.00 2704 128 0.2885 0.3473 REMARK 3 8 2.8674 - 2.7427 1.00 2723 136 0.2829 0.3689 REMARK 3 9 2.7427 - 2.6372 1.00 2680 147 0.2958 0.3494 REMARK 3 10 2.6372 - 2.5500 0.98 2645 137 0.2991 0.3558 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 5188 REMARK 3 ANGLE : 1.081 7077 REMARK 3 CHIRALITY : 0.059 805 REMARK 3 PLANARITY : 0.006 914 REMARK 3 DIHEDRAL : 5.565 4014 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 135 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7473 17.7146 -20.1162 REMARK 3 T TENSOR REMARK 3 T11: 0.3147 T22: 0.4435 REMARK 3 T33: 0.2164 T12: 0.0529 REMARK 3 T13: -0.0188 T23: -0.0793 REMARK 3 L TENSOR REMARK 3 L11: 7.5409 L22: 4.4033 REMARK 3 L33: 5.4483 L12: 2.8644 REMARK 3 L13: -5.8906 L23: -1.0786 REMARK 3 S TENSOR REMARK 3 S11: -0.5049 S12: 0.1097 S13: -0.4807 REMARK 3 S21: -0.0819 S22: 0.2289 S23: -0.2199 REMARK 3 S31: 0.6710 S32: 0.0845 S33: 0.2940 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 156 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5467 18.0944 -16.3053 REMARK 3 T TENSOR REMARK 3 T11: 0.3531 T22: 0.2969 REMARK 3 T33: 0.3209 T12: 0.0219 REMARK 3 T13: 0.0007 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 6.3664 L22: 2.7147 REMARK 3 L33: 3.0548 L12: -1.9272 REMARK 3 L13: -2.5798 L23: -0.1716 REMARK 3 S TENSOR REMARK 3 S11: -0.0560 S12: -0.3866 S13: -0.6574 REMARK 3 S21: -0.1494 S22: -0.2032 S23: -0.2981 REMARK 3 S31: 0.1182 S32: 0.2465 S33: 0.1790 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 181 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7888 26.3253 -10.1897 REMARK 3 T TENSOR REMARK 3 T11: 0.2966 T22: 0.6096 REMARK 3 T33: 0.3479 T12: 0.0189 REMARK 3 T13: 0.0512 T23: -0.1359 REMARK 3 L TENSOR REMARK 3 L11: 6.3371 L22: 2.0080 REMARK 3 L33: 3.7505 L12: 1.5953 REMARK 3 L13: 0.4003 L23: -0.0850 REMARK 3 S TENSOR REMARK 3 S11: -0.1499 S12: -0.8329 S13: 0.4262 REMARK 3 S21: 0.6513 S22: 0.4207 S23: -0.4529 REMARK 3 S31: -0.1896 S32: 0.3880 S33: -0.2615 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 203 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3348 30.0287 -18.7507 REMARK 3 T TENSOR REMARK 3 T11: 0.2337 T22: 0.2779 REMARK 3 T33: 0.2281 T12: 0.0109 REMARK 3 T13: -0.0110 T23: -0.0536 REMARK 3 L TENSOR REMARK 3 L11: 7.1086 L22: 2.4626 REMARK 3 L33: 3.0614 L12: 0.5193 REMARK 3 L13: 0.4297 L23: -0.5726 REMARK 3 S TENSOR REMARK 3 S11: -0.2185 S12: 0.0106 S13: 0.5703 REMARK 3 S21: 0.1364 S22: 0.1974 S23: 0.0156 REMARK 3 S31: 0.0448 S32: 0.0446 S33: 0.0240 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9136 45.6056 -25.4107 REMARK 3 T TENSOR REMARK 3 T11: 0.3703 T22: 0.5250 REMARK 3 T33: 0.8055 T12: -0.0610 REMARK 3 T13: 0.1337 T23: 0.0692 REMARK 3 L TENSOR REMARK 3 L11: 5.1402 L22: 4.9350 REMARK 3 L33: 5.9085 L12: 1.2780 REMARK 3 L13: -0.0117 L23: 0.2954 REMARK 3 S TENSOR REMARK 3 S11: -0.0780 S12: 0.7421 S13: 0.8179 REMARK 3 S21: -0.1739 S22: 0.7799 S23: -0.2160 REMARK 3 S31: -0.5968 S32: 0.7275 S33: -0.7036 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 40 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5122 39.3218 -16.9322 REMARK 3 T TENSOR REMARK 3 T11: 0.3872 T22: 1.0221 REMARK 3 T33: 0.7118 T12: 0.0013 REMARK 3 T13: -0.0227 T23: -0.1414 REMARK 3 L TENSOR REMARK 3 L11: 2.0700 L22: 5.9774 REMARK 3 L33: 2.0833 L12: -1.3519 REMARK 3 L13: 3.5040 L23: -3.2791 REMARK 3 S TENSOR REMARK 3 S11: -0.1942 S12: -0.3247 S13: 1.4990 REMARK 3 S21: 0.1619 S22: -0.2028 S23: -0.6285 REMARK 3 S31: -0.1189 S32: 0.7084 S33: 0.5147 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 53 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2766 46.2269 -19.2622 REMARK 3 T TENSOR REMARK 3 T11: 0.2742 T22: 0.6266 REMARK 3 T33: 0.7865 T12: 0.0227 REMARK 3 T13: 0.0767 T23: 0.0494 REMARK 3 L TENSOR REMARK 3 L11: 9.0183 L22: 8.9484 REMARK 3 L33: 7.9482 L12: -0.5296 REMARK 3 L13: -2.6816 L23: 2.5663 REMARK 3 S TENSOR REMARK 3 S11: 0.1844 S12: -0.1691 S13: 2.4751 REMARK 3 S21: 0.4156 S22: 0.0790 S23: -0.5705 REMARK 3 S31: 0.0524 S32: -0.1187 S33: -0.3867 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 72 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6631 49.8192 -29.8060 REMARK 3 T TENSOR REMARK 3 T11: 0.8941 T22: 0.7331 REMARK 3 T33: 1.3339 T12: -0.3141 REMARK 3 T13: 0.2034 T23: 0.1814 REMARK 3 L TENSOR REMARK 3 L11: 6.0391 L22: 3.5002 REMARK 3 L33: 5.5984 L12: -0.1841 REMARK 3 L13: -5.7889 L23: -0.3066 REMARK 3 S TENSOR REMARK 3 S11: 0.8407 S12: 0.3936 S13: 1.0184 REMARK 3 S21: -1.1509 S22: 1.7899 S23: 0.4793 REMARK 3 S31: -1.1910 S32: -0.9206 S33: -2.4431 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 83 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1891 40.2055 -21.8332 REMARK 3 T TENSOR REMARK 3 T11: 0.3572 T22: 0.7958 REMARK 3 T33: 0.7623 T12: -0.0297 REMARK 3 T13: 0.0350 T23: -0.1074 REMARK 3 L TENSOR REMARK 3 L11: 2.9384 L22: 3.5095 REMARK 3 L33: 0.4920 L12: -1.1828 REMARK 3 L13: -1.2346 L23: 0.0114 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: 0.7278 S13: 0.5663 REMARK 3 S21: -0.0535 S22: 0.4896 S23: -1.0791 REMARK 3 S31: -0.2659 S32: 0.5050 S33: -0.6290 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 106 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4489 41.7774 -22.5837 REMARK 3 T TENSOR REMARK 3 T11: 0.3123 T22: 0.6927 REMARK 3 T33: 1.0673 T12: 0.0498 REMARK 3 T13: -0.0738 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 7.6077 L22: 8.2847 REMARK 3 L33: 7.6159 L12: 6.3227 REMARK 3 L13: 6.1666 L23: 6.7761 REMARK 3 S TENSOR REMARK 3 S11: -0.5052 S12: 0.7015 S13: 1.0649 REMARK 3 S21: 0.0948 S22: 0.3512 S23: -0.6112 REMARK 3 S31: -0.2326 S32: 1.0409 S33: 0.0500 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6814 28.2143 -50.8064 REMARK 3 T TENSOR REMARK 3 T11: 0.4908 T22: 0.9933 REMARK 3 T33: 0.4557 T12: -0.2379 REMARK 3 T13: 0.0511 T23: 0.1480 REMARK 3 L TENSOR REMARK 3 L11: 2.0249 L22: 2.1980 REMARK 3 L33: 1.6599 L12: -4.1982 REMARK 3 L13: 2.6956 L23: -1.7562 REMARK 3 S TENSOR REMARK 3 S11: 0.0230 S12: 1.0535 S13: 0.8963 REMARK 3 S21: -0.3330 S22: -0.4047 S23: -0.4306 REMARK 3 S31: 0.2134 S32: 0.6011 S33: 0.3462 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3664 28.5529 -42.1313 REMARK 3 T TENSOR REMARK 3 T11: 0.2984 T22: 0.4690 REMARK 3 T33: 0.3277 T12: -0.0617 REMARK 3 T13: 0.0014 T23: 0.0332 REMARK 3 L TENSOR REMARK 3 L11: 7.7294 L22: 1.9105 REMARK 3 L33: 6.9344 L12: -2.7596 REMARK 3 L13: -0.3275 L23: -0.3245 REMARK 3 S TENSOR REMARK 3 S11: -0.1075 S12: 0.6782 S13: 0.4188 REMARK 3 S21: 0.0530 S22: 0.1692 S23: 0.1552 REMARK 3 S31: -0.4036 S32: -0.2840 S33: -0.0138 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2280 20.5811 -55.8214 REMARK 3 T TENSOR REMARK 3 T11: 0.3614 T22: 1.0632 REMARK 3 T33: 0.3088 T12: -0.0313 REMARK 3 T13: 0.0057 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 0.9108 L22: 3.4599 REMARK 3 L33: 4.4067 L12: -1.1868 REMARK 3 L13: -0.6050 L23: 0.4627 REMARK 3 S TENSOR REMARK 3 S11: -0.0651 S12: 1.1185 S13: 0.0903 REMARK 3 S21: -0.0933 S22: 0.3035 S23: -0.1161 REMARK 3 S31: 0.3985 S32: 0.1138 S33: -0.2449 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0533 18.5580 -61.7923 REMARK 3 T TENSOR REMARK 3 T11: 0.5880 T22: 1.5872 REMARK 3 T33: 0.3257 T12: -0.0049 REMARK 3 T13: -0.0254 T23: -0.1776 REMARK 3 L TENSOR REMARK 3 L11: 1.1005 L22: 2.3020 REMARK 3 L33: 4.5037 L12: -1.1878 REMARK 3 L13: -0.0053 L23: -1.7970 REMARK 3 S TENSOR REMARK 3 S11: -0.0367 S12: 1.5162 S13: -0.4702 REMARK 3 S21: -0.1096 S22: -0.1719 S23: 0.0932 REMARK 3 S31: -0.0490 S32: -0.1712 S33: 0.1465 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.8083 4.8324 -46.9150 REMARK 3 T TENSOR REMARK 3 T11: 0.5838 T22: 0.6774 REMARK 3 T33: 0.3865 T12: 0.0706 REMARK 3 T13: 0.0113 T23: -0.2093 REMARK 3 L TENSOR REMARK 3 L11: 6.6304 L22: 9.9991 REMARK 3 L33: 8.2433 L12: 0.5986 REMARK 3 L13: 1.4886 L23: -0.2307 REMARK 3 S TENSOR REMARK 3 S11: -0.0809 S12: 0.4908 S13: -1.0488 REMARK 3 S21: -0.5926 S22: 0.9225 S23: -0.2136 REMARK 3 S31: 0.8392 S32: 0.9875 S33: -0.8367 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9191 15.0089 -47.8639 REMARK 3 T TENSOR REMARK 3 T11: 0.4198 T22: 0.7890 REMARK 3 T33: 0.3085 T12: -0.0083 REMARK 3 T13: 0.0429 T23: -0.0573 REMARK 3 L TENSOR REMARK 3 L11: 2.9853 L22: 1.0650 REMARK 3 L33: 3.5067 L12: -0.3021 REMARK 3 L13: -1.4875 L23: 1.0407 REMARK 3 S TENSOR REMARK 3 S11: -0.1301 S12: 0.3898 S13: -0.2677 REMARK 3 S21: -0.1146 S22: 0.0958 S23: -0.1668 REMARK 3 S31: 0.1945 S32: 0.7499 S33: 0.0238 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7209 12.7468 -36.2188 REMARK 3 T TENSOR REMARK 3 T11: 0.3384 T22: 0.4567 REMARK 3 T33: 0.2127 T12: -0.0318 REMARK 3 T13: -0.0247 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 7.4396 L22: 3.2803 REMARK 3 L33: 7.9239 L12: -3.5427 REMARK 3 L13: -4.4177 L23: 1.0702 REMARK 3 S TENSOR REMARK 3 S11: -0.1801 S12: 0.3514 S13: -0.2228 REMARK 3 S21: 0.0407 S22: -0.0597 S23: -0.0058 REMARK 3 S31: 0.3606 S32: 0.2230 S33: 0.2640 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8773 12.6329 -26.0471 REMARK 3 T TENSOR REMARK 3 T11: 0.2818 T22: 0.4407 REMARK 3 T33: 0.2966 T12: -0.0959 REMARK 3 T13: 0.0331 T23: -0.1042 REMARK 3 L TENSOR REMARK 3 L11: 6.1342 L22: 5.5700 REMARK 3 L33: 6.7412 L12: -2.0783 REMARK 3 L13: -0.9072 L23: -0.5699 REMARK 3 S TENSOR REMARK 3 S11: -0.4445 S12: 0.2039 S13: -0.4100 REMARK 3 S21: 0.0928 S22: 0.3838 S23: 0.1902 REMARK 3 S31: 0.3015 S32: -0.5371 S33: 0.0843 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 249 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7787 23.2257 -35.1005 REMARK 3 T TENSOR REMARK 3 T11: 0.2877 T22: 0.6622 REMARK 3 T33: 0.3117 T12: -0.0392 REMARK 3 T13: 0.0525 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 4.1114 L22: 4.1020 REMARK 3 L33: 6.9110 L12: 2.6521 REMARK 3 L13: 1.6533 L23: 0.5867 REMARK 3 S TENSOR REMARK 3 S11: 0.2615 S12: 1.0323 S13: 0.3488 REMARK 3 S21: 0.2615 S22: -0.0405 S23: 0.0873 REMARK 3 S31: -0.0720 S32: -1.1294 S33: -0.4455 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.8153 17.5014 -9.0960 REMARK 3 T TENSOR REMARK 3 T11: 0.2512 T22: 0.3786 REMARK 3 T33: 0.2236 T12: -0.0305 REMARK 3 T13: 0.0436 T23: -0.0396 REMARK 3 L TENSOR REMARK 3 L11: 4.0788 L22: 2.6221 REMARK 3 L33: 3.0293 L12: 0.2689 REMARK 3 L13: -1.1137 L23: 0.0472 REMARK 3 S TENSOR REMARK 3 S11: -0.1242 S12: 0.3201 S13: -0.4351 REMARK 3 S21: 0.0090 S22: -0.0875 S23: 0.2333 REMARK 3 S31: 0.3582 S32: -0.4954 S33: 0.2287 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 85 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0965 27.1237 -9.5585 REMARK 3 T TENSOR REMARK 3 T11: 0.2336 T22: 0.2137 REMARK 3 T33: 0.2258 T12: -0.0455 REMARK 3 T13: -0.0083 T23: -0.0636 REMARK 3 L TENSOR REMARK 3 L11: 5.2301 L22: 4.1368 REMARK 3 L33: 2.5966 L12: -0.4504 REMARK 3 L13: -1.0380 L23: -1.6045 REMARK 3 S TENSOR REMARK 3 S11: 0.0026 S12: -0.0279 S13: 0.1214 REMARK 3 S21: -0.0128 S22: 0.0295 S23: 0.0075 REMARK 3 S31: 0.0881 S32: -0.3822 S33: -0.0220 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KD2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1000252282. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28832 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.546 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.21100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 1.70900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2AAI, 3EZJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM ZINC ACETATE, 100 MM MES PH REMARK 280 6.0, 10% PEG 8,000, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.80350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.77950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.80350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.77950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -219.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 1 REMARK 465 PHE A 2 REMARK 465 PRO A 3 REMARK 465 LYS A 4 REMARK 465 PRO A 263 REMARK 465 SER A 264 REMARK 465 SER A 265 REMARK 465 GLN A 266 REMARK 465 PHE A 267 REMARK 465 ALA B 1 REMARK 465 GLY C 26 REMARK 465 SER C 117 REMARK 465 SER C 118 REMARK 465 GLU C 119 REMARK 465 PRO C 120 REMARK 465 LYS C 121 REMARK 465 THR C 122 REMARK 465 PRO C 123 REMARK 465 LYS C 124 REMARK 465 PRO C 125 REMARK 465 GLN C 126 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 10 O5 NAG D 1 1.35 REMARK 500 SG CYS A 259 SG CYS B 4 1.66 REMARK 500 O GLY C 15 O HOH C 301 1.85 REMARK 500 OE2 GLU B 199 O HOH B 401 1.97 REMARK 500 O6 NAG E 1 O HOH B 468 2.00 REMARK 500 OE2 GLU A 102 O HOH A 401 2.04 REMARK 500 O GLY A 50 O HOH A 402 2.06 REMARK 500 O LEU A 214 CD1 ILE A 218 2.06 REMARK 500 O ASN A 47 O HOH A 403 2.08 REMARK 500 O HOH B 440 O HOH B 468 2.08 REMARK 500 OD1 ASP A 201 OG SER A 203 2.09 REMARK 500 CG ASN A 10 C1 NAG D 1 2.11 REMARK 500 OD2 ASP A 110 O HOH A 404 2.11 REMARK 500 OD2 ASP B 79 O HOH B 402 2.14 REMARK 500 OD1 ASN B 136 O HOH B 403 2.15 REMARK 500 OE2 GLU A 138 O HOH A 405 2.16 REMARK 500 O HOH A 425 O HOH B 458 2.17 REMARK 500 OG SER A 241 O HOH A 406 2.17 REMARK 500 C4 NAG E 1 C1 NAG E 2 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 6 C - N - CA ANGL. DEV. = -16.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 96 9.64 -69.82 REMARK 500 ASN A 97 143.87 -175.35 REMARK 500 ILE A 175 -73.91 -111.04 REMARK 500 GLU A 220 49.17 -101.66 REMARK 500 ASN A 222 -117.78 63.16 REMARK 500 ASP B 25 9.46 58.38 REMARK 500 ASN B 42 -160.84 -105.14 REMARK 500 ASN B 60 -15.22 64.65 REMARK 500 SER B 156 -130.74 43.55 REMARK 500 LYS B 168 107.65 -52.24 REMARK 500 ASN B 196 34.00 -95.35 REMARK 500 ALA C 49 137.04 -171.85 REMARK 500 ASP C 72 -9.47 -143.90 REMARK 500 ASN C 73 -19.08 63.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 245 SER A 246 -149.38 REMARK 500 GLU B 167 LYS B 168 -148.30 REMARK 500 SER C 29 SER C 30 -147.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 322 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH C 323 DISTANCE = 5.92 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 102 OE1 REMARK 620 2 GLU A 102 OE2 53.1 REMARK 620 3 HIS A 106 NE2 89.5 95.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 29 ND1 REMARK 620 2 ASP B 194 OD1 128.2 REMARK 620 3 ASP B 194 OD2 127.1 2.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 29 OG REMARK 620 2 ASP C 99 OD2 81.2 REMARK 620 3 HIS C 105 ND1 148.2 128.3 REMARK 620 4 HOH C 312 O 107.5 89.4 86.8 REMARK 620 N 1 2 3 DBREF 7KD2 A 1 267 UNP P02879 RICI_RICCO 36 302 DBREF 7KD2 B 1 262 UNP P02879 RICI_RICCO 315 576 DBREF 7KD2 C 1 126 PDB 7KD2 7KD2 1 126 SEQRES 1 A 267 ILE PHE PRO LYS GLN TYR PRO ILE ILE ASN PHE THR THR SEQRES 2 A 267 ALA GLY ALA THR VAL GLN SER TYR THR ASN PHE ILE ARG SEQRES 3 A 267 ALA VAL ARG GLY ARG LEU THR THR GLY ALA ASP VAL ARG SEQRES 4 A 267 HIS GLU ILE PRO VAL LEU PRO ASN ARG VAL GLY LEU PRO SEQRES 5 A 267 ILE ASN GLN ARG PHE ILE LEU VAL GLU LEU SER ASN HIS SEQRES 6 A 267 ALA GLU LEU SER VAL THR LEU ALA LEU ASP VAL THR ASN SEQRES 7 A 267 ALA TYR VAL VAL GLY TYR ARG ALA GLY ASN SER ALA TYR SEQRES 8 A 267 PHE PHE HIS PRO ASP ASN GLN GLU ASP ALA GLU ALA ILE SEQRES 9 A 267 THR HIS LEU PHE THR ASP VAL GLN ASN ARG TYR THR PHE SEQRES 10 A 267 ALA PHE GLY GLY ASN TYR ASP ARG LEU GLU GLN LEU ALA SEQRES 11 A 267 GLY ASN LEU ARG GLU ASN ILE GLU LEU GLY ASN GLY PRO SEQRES 12 A 267 LEU GLU GLU ALA ILE SER ALA LEU TYR TYR TYR SER THR SEQRES 13 A 267 GLY GLY THR GLN LEU PRO THR LEU ALA ARG SER PHE ILE SEQRES 14 A 267 ILE CYS ILE GLN MET ILE SER GLU ALA ALA ARG PHE GLN SEQRES 15 A 267 TYR ILE GLU GLY GLU MET ARG THR ARG ILE ARG TYR ASN SEQRES 16 A 267 ARG ARG SER ALA PRO ASP PRO SER VAL ILE THR LEU GLU SEQRES 17 A 267 ASN SER TRP GLY ARG LEU SER THR ALA ILE GLN GLU SER SEQRES 18 A 267 ASN GLN GLY ALA PHE ALA SER PRO ILE GLN LEU GLN ARG SEQRES 19 A 267 ARG ASN GLY SER LYS PHE SER VAL TYR ASP VAL SER ILE SEQRES 20 A 267 LEU ILE PRO ILE ILE ALA LEU MET VAL TYR ARG CYS ALA SEQRES 21 A 267 PRO PRO PRO SER SER GLN PHE SEQRES 1 B 262 ALA ASP VAL CYS MET ASP PRO GLU PRO ILE VAL ARG ILE SEQRES 2 B 262 VAL GLY ARG ASN GLY LEU CYS VAL ASP VAL ARG ASP GLY SEQRES 3 B 262 ARG PHE HIS ASN GLY ASN ALA ILE GLN LEU TRP PRO CYS SEQRES 4 B 262 LYS SER ASN THR ASP ALA ASN GLN LEU TRP THR LEU LYS SEQRES 5 B 262 ARG ASP ASN THR ILE ARG SER ASN GLY LYS CYS LEU THR SEQRES 6 B 262 THR TYR GLY TYR SER PRO GLY VAL TYR VAL MET ILE TYR SEQRES 7 B 262 ASP CYS ASN THR ALA ALA THR ASP ALA THR ARG TRP GLN SEQRES 8 B 262 ILE TRP ASP ASN GLY THR ILE ILE ASN PRO ARG SER SER SEQRES 9 B 262 LEU VAL LEU ALA ALA THR SER GLY ASN SER GLY THR THR SEQRES 10 B 262 LEU THR VAL GLN THR ASN ILE TYR ALA VAL SER GLN GLY SEQRES 11 B 262 TRP LEU PRO THR ASN ASN THR GLN PRO PHE VAL THR THR SEQRES 12 B 262 ILE VAL GLY LEU TYR GLY LEU CYS LEU GLN ALA ASN SER SEQRES 13 B 262 GLY GLN VAL TRP ILE GLU ASP CYS SER SER GLU LYS ALA SEQRES 14 B 262 GLU GLN GLN TRP ALA LEU TYR ALA ASP GLY SER ILE ARG SEQRES 15 B 262 PRO GLN GLN ASN ARG ASP ASN CYS LEU THR SER ASP SER SEQRES 16 B 262 ASN ILE ARG GLU THR VAL VAL LYS ILE LEU SER CYS GLY SEQRES 17 B 262 PRO ALA SER SER GLY GLN ARG TRP MET PHE LYS ASN ASP SEQRES 18 B 262 GLY THR ILE LEU ASN LEU TYR SER GLY LEU VAL LEU ASP SEQRES 19 B 262 VAL ARG ALA SER ASP PRO SER LEU LYS GLN ILE ILE LEU SEQRES 20 B 262 TYR PRO LEU HIS GLY ASP PRO ASN GLN ILE TRP LEU PRO SEQRES 21 B 262 LEU PHE SEQRES 1 C 126 GLN VAL GLN LEU VAL GLU THR GLY GLY GLY LEU VAL GLN SEQRES 2 C 126 PRO GLY GLY SER LEU LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 C 126 SER ILE SER SER PRO ASN VAL MET GLY TRP TYR ARG GLN SEQRES 4 C 126 ALA PRO GLY LYS GLN ARG GLU LEU VAL ALA THR MET THR SEQRES 5 C 126 SER GLY GLY ASN THR TYR SER GLU ASP SER VAL LYS GLY SEQRES 6 C 126 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 C 126 TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 C 126 VAL TYR TYR CYS ASN ALA ARG ASP MET TRP ASP ARG SER SEQRES 9 C 126 HIS GLU TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 10 C 126 SER GLU PRO LYS THR PRO LYS PRO GLN HET NAG D 1 14 HET FUC D 2 10 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET ZN A 301 1 HET ZN A 302 1 HET CL A 303 1 HET CL A 304 1 HET CL A 305 1 HET ZN B 301 1 HET CL B 302 1 HET CL B 303 1 HET CL B 304 1 HET CL B 305 1 HET ZN C 201 1 HET ZN C 202 1 HET CL C 203 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 4 NAG 5(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 6 BMA C6 H12 O6 FORMUL 7 ZN 5(ZN 2+) FORMUL 9 CL 8(CL 1-) FORMUL 20 HOH *182(H2 O) HELIX 1 AA1 THR A 17 THR A 33 1 17 HELIX 2 AA2 PRO A 52 GLN A 55 5 4 HELIX 3 AA3 ASN A 97 THR A 105 1 9 HELIX 4 AA4 ASN A 122 GLY A 131 1 10 HELIX 5 AA5 LEU A 133 ILE A 137 5 5 HELIX 6 AA6 GLY A 140 SER A 155 1 16 HELIX 7 AA7 GLN A 160 ILE A 175 1 16 HELIX 8 AA8 ILE A 175 PHE A 181 1 7 HELIX 9 AA9 PHE A 181 ASN A 195 1 15 HELIX 10 AB1 ASP A 201 GLU A 220 1 20 HELIX 11 AB2 SER A 246 ILE A 249 5 4 HELIX 12 AB3 GLY B 15 LEU B 19 5 5 HELIX 13 AB4 ASP B 25 ARG B 27 5 3 HELIX 14 AB5 ASP B 44 LEU B 48 5 5 HELIX 15 AB6 ALA B 84 THR B 88 5 5 HELIX 16 AB7 ALA B 126 GLY B 130 5 5 HELIX 17 AB8 GLY B 146 LEU B 150 5 5 HELIX 18 AB9 LYS B 168 GLN B 171 5 4 HELIX 19 AC1 SER B 211 ARG B 215 5 5 HELIX 20 AC2 ALA B 237 LYS B 243 5 7 HELIX 21 AC3 ASP B 253 ILE B 257 5 5 HELIX 22 AC4 ASP C 61 LYS C 64 5 4 HELIX 23 AC5 LYS C 86 THR C 90 5 5 SHEET 1 AA1 6 ILE A 8 THR A 12 0 SHEET 2 AA1 6 PHE A 57 SER A 63 1 O LEU A 59 N ILE A 9 SHEET 3 AA1 6 SER A 69 ASP A 75 -1 O VAL A 70 N LEU A 62 SHEET 4 AA1 6 VAL A 81 ALA A 86 -1 O GLY A 83 N ALA A 73 SHEET 5 AA1 6 SER A 89 PHE A 92 -1 O TYR A 91 N TYR A 84 SHEET 6 AA1 6 ASN A 113 THR A 116 1 O TYR A 115 N PHE A 92 SHEET 1 AA2 2 VAL A 38 ARG A 39 0 SHEET 2 AA2 2 ILE A 42 PRO A 43 -1 O ILE A 42 N ARG A 39 SHEET 1 AA3 2 ALA A 225 GLN A 233 0 SHEET 2 AA3 2 LYS A 239 ASP A 244 -1 O TYR A 243 N PHE A 226 SHEET 1 AA4 6 VAL B 75 TYR B 78 0 SHEET 2 AA4 6 LYS B 62 THR B 66 -1 N CYS B 63 O TYR B 78 SHEET 3 AA4 6 ILE B 57 SER B 59 -1 N ILE B 57 O LEU B 64 SHEET 4 AA4 6 TRP B 49 LEU B 51 -1 N THR B 50 O ARG B 58 SHEET 5 AA4 6 ILE B 10 VAL B 14 -1 N VAL B 11 O TRP B 49 SHEET 6 AA4 6 LEU B 132 THR B 134 -1 O LEU B 132 N VAL B 14 SHEET 1 AA5 2 CYS B 20 VAL B 23 0 SHEET 2 AA5 2 ILE B 34 TRP B 37 -1 O TRP B 37 N CYS B 20 SHEET 1 AA6 4 GLN B 91 ILE B 92 0 SHEET 2 AA6 4 ILE B 98 ASN B 100 -1 O ILE B 99 N GLN B 91 SHEET 3 AA6 4 LEU B 105 ALA B 108 -1 O LEU B 105 N ASN B 100 SHEET 4 AA6 4 THR B 119 GLN B 121 -1 O THR B 119 N ALA B 108 SHEET 1 AA7 4 ILE B 181 PRO B 183 0 SHEET 2 AA7 4 TRP B 173 LEU B 175 -1 N ALA B 174 O ARG B 182 SHEET 3 AA7 4 PHE B 140 VAL B 145 -1 N PHE B 140 O LEU B 175 SHEET 4 AA7 4 LEU B 259 LEU B 261 -1 O LEU B 259 N VAL B 145 SHEET 1 AA8 2 CYS B 151 ASN B 155 0 SHEET 2 AA8 2 GLN B 158 GLU B 162 -1 O GLU B 162 N CYS B 151 SHEET 1 AA9 2 ASN B 189 THR B 192 0 SHEET 2 AA9 2 LYS B 203 SER B 206 -1 O LYS B 203 N THR B 192 SHEET 1 AB1 4 MET B 217 PHE B 218 0 SHEET 2 AB1 4 ILE B 224 ASN B 226 -1 O LEU B 225 N MET B 217 SHEET 3 AB1 4 LEU B 231 VAL B 235 -1 O LEU B 231 N ASN B 226 SHEET 4 AB1 4 ILE B 245 TYR B 248 -1 O ILE B 246 N ASP B 234 SHEET 1 AB2 4 LEU C 4 THR C 7 0 SHEET 2 AB2 4 LEU C 18 ALA C 24 -1 O ALA C 23 N VAL C 5 SHEET 3 AB2 4 THR C 77 MET C 82 -1 O LEU C 80 N LEU C 20 SHEET 4 AB2 4 PHE C 67 ARG C 71 -1 N THR C 68 O GLN C 81 SHEET 1 AB3 5 THR C 57 SER C 59 0 SHEET 2 AB3 5 GLU C 46 THR C 52 -1 N THR C 50 O TYR C 58 SHEET 3 AB3 5 ASN C 32 GLN C 39 -1 N TRP C 36 O ALA C 49 SHEET 4 AB3 5 ALA C 91 ASP C 99 -1 O ASN C 96 N GLY C 35 SHEET 5 AB3 5 GLU C 106 TRP C 108 -1 O TYR C 107 N ALA C 97 SHEET 1 AB4 5 THR C 57 SER C 59 0 SHEET 2 AB4 5 GLU C 46 THR C 52 -1 N THR C 50 O TYR C 58 SHEET 3 AB4 5 ASN C 32 GLN C 39 -1 N TRP C 36 O ALA C 49 SHEET 4 AB4 5 ALA C 91 ASP C 99 -1 O ASN C 96 N GLY C 35 SHEET 5 AB4 5 THR C 112 VAL C 114 -1 O THR C 112 N TYR C 93 SSBOND 1 CYS B 20 CYS B 39 1555 1555 2.04 SSBOND 2 CYS B 63 CYS B 80 1555 1555 2.04 SSBOND 3 CYS B 151 CYS B 164 1555 1555 2.03 SSBOND 4 CYS B 190 CYS B 207 1555 1555 2.01 SSBOND 5 CYS C 22 CYS C 95 1555 1555 2.04 LINK ND2 ASN A 10 C1 NAG D 1 1555 1555 1.46 LINK ND2 ASN B 95 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 135 C1 NAG F 1 1555 1555 1.44 LINK O3 NAG D 1 C1 FUC D 2 1555 1555 1.46 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.43 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK OE1 GLU A 102 ZN ZN A 301 1555 4454 2.37 LINK OE2 GLU A 102 ZN ZN A 301 1555 4454 2.51 LINK NE2 HIS A 106 ZN ZN A 301 1555 4454 1.80 LINK ND1 HIS B 29 ZN ZN B 301 1555 1555 2.62 LINK OD1 ASP B 194 ZN ZN B 301 1555 4555 2.23 LINK OD2 ASP B 194 ZN ZN B 301 1555 4555 2.60 LINK OG SER C 29 ZN ZN C 201 1555 1555 2.08 LINK OD2 ASP C 99 ZN ZN C 201 1555 1555 1.99 LINK ND1 HIS C 105 ZN ZN C 201 1555 1555 2.09 LINK ZN ZN C 201 O HOH C 312 1555 1555 2.26 LINK ZN ZN C 202 O HOH C 315 1555 1555 2.12 CRYST1 77.607 99.559 111.283 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012885 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010044 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008986 0.00000