data_7KDO
#
_entry.id 7KDO
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.380
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 7KDO pdb_00007kdo 10.2210/pdb7kdo/pdb
WWPDB D_1000252288 ? ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 7KDO
_pdbx_database_status.recvd_initial_deposition_date 2020-10-09
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Shaw, G.X.' 1 ?
'Shi, G.' 2 ?
'Ji, X.' 3 0000-0001-6942-1514
#
loop_
_citation.abstract
_citation.abstract_id_CAS
_citation.book_id_ISBN
_citation.book_publisher
_citation.book_publisher_city
_citation.book_title
_citation.coordinate_linkage
_citation.country
_citation.database_id_Medline
_citation.details
_citation.id
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_full
_citation.journal_issue
_citation.journal_volume
_citation.language
_citation.page_first
_citation.page_last
_citation.title
_citation.year
_citation.database_id_CSD
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.unpublished_flag
? ? ? ? ? ? ? UK ? ? primary Bioorg.Med.Chem. BMECEP 1200 1464-3391 ? ? 29 ? 115847 115847
'Bisubstrate inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: Transition state analogs for high affinity binding.'
2021 ? 10.1016/j.bmc.2020.115847 33199204 ?
? ? ? ? ? ? ? US ? ? 1 'J. Med. Chem.' JMCMAR 0151 0022-2623 ? ? 44 ? 1364 1371
;Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: Synthesis and biochemical and crystallographic studies
;
2001 ? 10.1021/jm0004493 11311059 ?
? ? ? ? ? ? ? UK ? ? 2 'Bioorg. Med. Chem.' BMECEP 1200 0968-0896 ? ? 20 ? 47 57
'Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties' 2012
? 10.1016/j.bmc.2011.11.032 22169600 ?
? ? ? ? ? ? ? UK ? ? 3 'Bioorg. Med. Chem.' BMECEP 1200 0968-0896 ? ? 20 ? 4303 4309
'Bisubstrate analog inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New lead exhibits a distinct binding mode'
2012 ? 10.1016/j.bmc.2012.05.060 22727779 ?
? ? ? ? ? ? ? UK ? ? 4 'FEBS J.' ? ? 1742-464X ? ? 281 ? 4123 4134
;Structural enzymology and inhibition of the bi-functional folate pathway enzyme HPPK-DHPS from the biowarfare agent Francisella tularensis
;
2014 ? 10.1111/febs.12896 24975935 ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Shi, G.' 1 ?
primary 'Shaw, G.X.' 2 ?
primary 'Zhu, F.' 3 ?
primary 'Tarasov, S.G.' 4 ?
primary 'Ji, X.' 5 ?
1 'Shi, G.' 6 ?
1 'Blaszczyk, J.' 7 ?
1 'Ji, X.' 8 0000-0001-6942-1514
1 'Yan, H.' 9 ?
2 'Shi, G.' 10 ?
2 'Shaw, G.' 11 ?
2 'Liang, Y.-H.' 12 ?
2 'Subburamann, P.' 13 ?
2 'Li, Y.' 14 ?
2 'Wu, Y.' 15 ?
2 'Yan, H.' 16 ?
2 'Ji, X.' 17 0000-0001-6942-1514
3 'Shi, G.' 18 ?
3 'Shaw, G.' 19 ?
3 'Li, Y.' 20 ?
3 'Wu, Y.' 21 ?
3 'Yan, H.' 22 ?
3 'Ji, X.' 23 0000-0001-6942-1514
4 'Shaw, G.X.' 24 ?
4 'Li, Y.' 25 ?
4 'Shi, G.' 26 ?
4 'Wu, Y.' 27 ?
4 'Cherry, S.' 28 ?
4 'Needle, D.' 29 ?
4 'Zhang, D.' 30 ?
4 'Tropea, J.E.' 31 ?
4 'Waugh, D.S.' 32 ?
4 'Yan, H.' 33 ?
4 'Ji, X.' 34 0000-0001-6942-1514
#
_cell.angle_alpha 90.000
_cell.angle_alpha_esd ?
_cell.angle_beta 90.000
_cell.angle_beta_esd ?
_cell.angle_gamma 90.000
_cell.angle_gamma_esd ?
_cell.entry_id 7KDO
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 53.010
_cell.length_a_esd ?
_cell.length_b 70.091
_cell.length_b_esd ?
_cell.length_c 36.271
_cell.length_c_esd ?
_cell.volume 134765.770
_cell.volume_esd ?
_cell.Z_PDB 4
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 7KDO
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 18
_symmetry.space_group_name_Hall 'P 2 2ab'
_symmetry.space_group_name_H-M 'P 21 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man '2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase' 17966.535 1 2.7.6.3 ? ? ?
2 non-polymer syn
;5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine
;
672.716 1 ? ? ? ?
3 water nat water 18.015 170 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name
'6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase,PPPK,7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase,HPPK'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ
GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
;
_entity_poly.pdbx_seq_one_letter_code_can
;TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ
GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 THR n
1 2 VAL n
1 3 ALA n
1 4 TYR n
1 5 ILE n
1 6 ALA n
1 7 ILE n
1 8 GLY n
1 9 SER n
1 10 ASN n
1 11 LEU n
1 12 ALA n
1 13 SER n
1 14 PRO n
1 15 LEU n
1 16 GLU n
1 17 GLN n
1 18 VAL n
1 19 ASN n
1 20 ALA n
1 21 ALA n
1 22 LEU n
1 23 LYS n
1 24 ALA n
1 25 LEU n
1 26 GLY n
1 27 ASP n
1 28 ILE n
1 29 PRO n
1 30 GLU n
1 31 SER n
1 32 HIS n
1 33 ILE n
1 34 LEU n
1 35 THR n
1 36 VAL n
1 37 SER n
1 38 SER n
1 39 PHE n
1 40 TYR n
1 41 ARG n
1 42 THR n
1 43 PRO n
1 44 PRO n
1 45 LEU n
1 46 GLY n
1 47 PRO n
1 48 GLN n
1 49 ASP n
1 50 GLN n
1 51 PRO n
1 52 ASP n
1 53 TYR n
1 54 LEU n
1 55 ASN n
1 56 ALA n
1 57 ALA n
1 58 VAL n
1 59 ALA n
1 60 LEU n
1 61 GLU n
1 62 THR n
1 63 SER n
1 64 LEU n
1 65 ALA n
1 66 PRO n
1 67 GLU n
1 68 GLU n
1 69 LEU n
1 70 LEU n
1 71 ASN n
1 72 HIS n
1 73 THR n
1 74 GLN n
1 75 ARG n
1 76 ILE n
1 77 GLU n
1 78 LEU n
1 79 GLN n
1 80 GLN n
1 81 GLY n
1 82 ARG n
1 83 VAL n
1 84 ARG n
1 85 LYS n
1 86 ALA n
1 87 GLU n
1 88 ARG n
1 89 TRP n
1 90 GLY n
1 91 PRO n
1 92 ARG n
1 93 THR n
1 94 LEU n
1 95 ASP n
1 96 LEU n
1 97 ASP n
1 98 ILE n
1 99 MET n
1 100 LEU n
1 101 PHE n
1 102 GLY n
1 103 ASN n
1 104 GLU n
1 105 VAL n
1 106 ILE n
1 107 ASN n
1 108 THR n
1 109 GLU n
1 110 ARG n
1 111 LEU n
1 112 THR n
1 113 VAL n
1 114 PRO n
1 115 HIS n
1 116 TYR n
1 117 ASP n
1 118 MET n
1 119 LYS n
1 120 ASN n
1 121 ARG n
1 122 GLY n
1 123 PHE n
1 124 MET n
1 125 LEU n
1 126 TRP n
1 127 PRO n
1 128 LEU n
1 129 PHE n
1 130 GLU n
1 131 ILE n
1 132 ALA n
1 133 PRO n
1 134 GLU n
1 135 LEU n
1 136 VAL n
1 137 PHE n
1 138 PRO n
1 139 ASP n
1 140 GLY n
1 141 GLU n
1 142 MET n
1 143 LEU n
1 144 ARG n
1 145 GLN n
1 146 ILE n
1 147 LEU n
1 148 HIS n
1 149 THR n
1 150 ARG n
1 151 ALA n
1 152 PHE n
1 153 ASP n
1 154 LYS n
1 155 LEU n
1 156 ASN n
1 157 LYS n
1 158 TRP n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type 'Biological sequence'
_entity_src_gen.pdbx_beg_seq_num 1
_entity_src_gen.pdbx_end_seq_num 158
_entity_src_gen.gene_src_common_name ?
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene 'folK, b0142, JW0138'
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain K12
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli (strain K12)'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus(DE3)-RIL'
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type plasmid
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name pET17b
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code HPPK_ECOLI
_struct_ref.pdbx_db_accession P26281
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ
GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW
;
_struct_ref.pdbx_align_begin 2
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 7KDO
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 158
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P26281
_struct_ref_seq.db_align_beg 2
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 159
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 158
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
H73 non-polymer .
;5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine
;
? 'C27 H36 N12 O7 S' 672.716
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 7KDO
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 1.88
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 34.41
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity 1.526
_exptl_crystal.pdbx_mosaicity_esd 0.014
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH 7.0
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 292
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details 'PEG 2000'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
_diffrn.pdbx_serial_crystal_experiment N
#
_diffrn_detector.details mirrors
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'RAYONIX MX300-HS'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2015-03-27
_diffrn_detector.pdbx_frequency ?
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator 'Double crystal'
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.000
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source SYNCHROTRON
_diffrn_source.target ?
_diffrn_source.type 'APS BEAMLINE 22-BM'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 1.000
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline 22-BM
_diffrn_source.pdbx_synchrotron_site APS
#
_reflns.B_iso_Wilson_estimate ?
_reflns.entry_id 7KDO
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 1.600
_reflns.d_resolution_low 30.000
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 17716
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 95.700
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 5.000
_reflns.pdbx_Rmerge_I_obs 0.067
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 9.600
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared 0.982
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all 0.074
_reflns.pdbx_Rpim_I_all 0.030
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all 88152
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_CC_star ?
_reflns.pdbx_R_split ?
#
loop_
_reflns_shell.d_res_high
_reflns_shell.d_res_low
_reflns_shell.meanI_over_sigI_all
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.number_measured_all
_reflns_shell.number_measured_obs
_reflns_shell.number_possible
_reflns_shell.number_unique_all
_reflns_shell.number_unique_obs
_reflns_shell.percent_possible_all
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_F_all
_reflns_shell.Rmerge_F_obs
_reflns_shell.Rmerge_I_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_gt
_reflns_shell.meanI_over_uI_all
_reflns_shell.meanI_over_uI_gt
_reflns_shell.number_measured_gt
_reflns_shell.number_unique_gt
_reflns_shell.percent_possible_gt
_reflns_shell.Rmerge_F_gt
_reflns_shell.Rmerge_I_gt
_reflns_shell.pdbx_redundancy
_reflns_shell.pdbx_Rsym_value
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_netI_over_sigmaI_all
_reflns_shell.pdbx_netI_over_sigmaI_obs
_reflns_shell.pdbx_Rrim_I_all
_reflns_shell.pdbx_Rpim_I_all
_reflns_shell.pdbx_rejects
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
_reflns_shell.pdbx_CC_half
_reflns_shell.pdbx_CC_star
_reflns_shell.pdbx_R_split
1.600 1.660 ? ? ? ? ? ? 1399 77.100 ? ? ? ? 0.581 ? ? ? ? ? ? ? ? 3.100 ? 0.847 ? ? 0.682 0.349 ? 1 1 0.413 ? ?
1.660 1.720 ? ? ? ? ? ? 1622 89.300 ? ? ? ? 0.556 ? ? ? ? ? ? ? ? 3.600 ? 0.895 ? ? 0.642 0.313 ? 2 1 0.622 ? ?
1.720 1.800 ? ? ? ? ? ? 1751 97.200 ? ? ? ? 0.484 ? ? ? ? ? ? ? ? 4.100 ? 0.910 ? ? 0.552 0.259 ? 3 1 0.718 ? ?
1.800 1.900 ? ? ? ? ? ? 1801 98.000 ? ? ? ? 0.389 ? ? ? ? ? ? ? ? 4.500 ? 0.999 ? ? 0.438 0.198 ? 4 1 0.871 ? ?
1.900 2.020 ? ? ? ? ? ? 1780 97.900 ? ? ? ? 0.262 ? ? ? ? ? ? ? ? 4.800 ? 1.005 ? ? 0.293 0.128 ? 5 1 0.941 ? ?
2.020 2.170 ? ? ? ? ? ? 1791 98.400 ? ? ? ? 0.181 ? ? ? ? ? ? ? ? 5.100 ? 1.009 ? ? 0.200 0.085 ? 6 1 0.974 ? ?
2.170 2.390 ? ? ? ? ? ? 1834 99.200 ? ? ? ? 0.123 ? ? ? ? ? ? ? ? 5.300 ? 1.002 ? ? 0.136 0.057 ? 7 1 0.990 ? ?
2.390 2.740 ? ? ? ? ? ? 1855 99.500 ? ? ? ? 0.086 ? ? ? ? ? ? ? ? 5.700 ? 0.996 ? ? 0.094 0.038 ? 8 1 0.995 ? ?
2.740 3.450 ? ? ? ? ? ? 1879 99.800 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 6.200 ? 1.004 ? ? 0.070 0.027 ? 9 1 0.997 ? ?
3.450 30.000 ? ? ? ? ? ? 2004 99.800 ? ? ? ? 0.031 ? ? ? ? ? ? ? ? 6.400 ? 1.004 ? ? 0.034 0.013 ? 10 1 0.999 ? ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max ?
_refine.B_iso_mean 25.78
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 7KDO
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 1.60
_refine.ls_d_res_low 29.93
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 17689
_refine.ls_number_reflns_R_free 1000
_refine.ls_number_reflns_R_work 16689
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 95.70
_refine.ls_percent_reflns_R_free 5.65
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1865
_refine.ls_R_factor_R_free 0.2244
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1842
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details 'FLAT BULK SOLVENT MODEL'
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.pdbx_R_complete ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.38
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method 'FREE R-VALUE'
_refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS'
_refine.pdbx_starting_model 3UDV
_refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2'
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii 1.1100
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii 0.9000
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error 24.8190
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML 0.1917
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.details ?
_refine_hist.d_res_high 1.60
_refine_hist.d_res_low 29.93
_refine_hist.number_atoms_solvent 170
_refine_hist.number_atoms_total 1459
_refine_hist.number_reflns_all ?
_refine_hist.number_reflns_obs ?
_refine_hist.number_reflns_R_free ?
_refine_hist.number_reflns_R_work ?
_refine_hist.R_factor_all ?
_refine_hist.R_factor_obs ?
_refine_hist.R_factor_R_free ?
_refine_hist.R_factor_R_work ?
_refine_hist.pdbx_number_residues_total ?
_refine_hist.pdbx_B_iso_mean_ligand ?
_refine_hist.pdbx_B_iso_mean_solvent ?
_refine_hist.pdbx_number_atoms_protein 1242
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 47
_refine_hist.pdbx_number_atoms_lipid ?
_refine_hist.pdbx_number_atoms_carb ?
_refine_hist.pdbx_pseudo_atom_details ?
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.0086 ? 1365 ? f_bond_d ? ?
'X-RAY DIFFRACTION' ? 1.0327 ? 1870 ? f_angle_d ? ?
'X-RAY DIFFRACTION' ? 0.0546 ? 205 ? f_chiral_restr ? ?
'X-RAY DIFFRACTION' ? 0.0056 ? 241 ? f_plane_restr ? ?
'X-RAY DIFFRACTION' ? 15.9554 ? 508 ? f_dihedral_angle_d ? ?
#
loop_
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_obs
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.redundancy_reflns_all
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.wR_factor_all
_refine_ls_shell.wR_factor_obs
_refine_ls_shell.wR_factor_R_free
_refine_ls_shell.wR_factor_R_work
_refine_ls_shell.pdbx_R_complete
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.pdbx_phase_error
_refine_ls_shell.pdbx_fsc_work
_refine_ls_shell.pdbx_fsc_free
'X-RAY DIFFRACTION' 1.60 1.68 . . 117 1936 79.82 . . . 0.3222 . 0.2823 . . . . . . . . . . .
'X-RAY DIFFRACTION' 1.68 1.79 . . 138 2324 94.69 . . . 0.2912 . 0.2661 . . . . . . . . . . .
'X-RAY DIFFRACTION' 1.79 1.93 . . 146 2415 98.09 . . . 0.3016 . 0.2373 . . . . . . . . . . .
'X-RAY DIFFRACTION' 1.93 2.12 . . 144 2417 97.90 . . . 0.2445 . 0.1913 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.12 2.43 . . 147 2456 99.12 . . . 0.2306 . 0.1688 . . . . . . . . . . .
'X-RAY DIFFRACTION' 2.43 3.06 . . 150 2504 99.66 . . . 0.2126 . 0.1720 . . . . . . . . . . .
'X-RAY DIFFRACTION' 3.06 29.93 . . 158 2637 100.00 . . . 0.1905 . 0.1636 . . . . . . . . . . .
#
_struct.entry_id 7KDO
_struct.title 'Crystal structure of Escherichia coli HPPK in complex with bisubstrate inhibitor HP-73'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 7KDO
_struct_keywords.text 'alpha beta, TRANSFERASE, TRANSFERASE-INHIBITOR complex'
_struct_keywords.pdbx_keywords TRANSFERASE/INHIBITOR
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 PRO A 14 ? ASP A 27 ? PRO A 14 ASP A 27 1 ? 14
HELX_P HELX_P2 AA2 ALA A 65 ? GLY A 81 ? ALA A 65 GLY A 81 1 ? 17
HELX_P HELX_P3 AA3 ASP A 117 ? ASN A 120 ? ASP A 117 ASN A 120 5 ? 4
HELX_P HELX_P4 AA4 ARG A 121 ? ALA A 132 ? ARG A 121 ALA A 132 1 ? 12
HELX_P HELX_P5 AA5 MET A 142 ? ALA A 151 ? MET A 142 ALA A 151 1 ? 10
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 GLY 90 A . ? GLY 90 A PRO 91 A ? PRO 91 A 1 3.28
2 VAL 113 A . ? VAL 113 A PRO 114 A ? PRO 114 A 1 -6.46
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA1 ? 4 ?
AA2 ? 4 ?
AA3 ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? anti-parallel
AA1 2 3 ? anti-parallel
AA1 3 4 ? anti-parallel
AA2 1 2 ? anti-parallel
AA2 2 3 ? anti-parallel
AA2 3 4 ? anti-parallel
AA3 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 SER A 31 ? VAL A 36 ? SER A 31 VAL A 36
AA1 2 TYR A 53 ? THR A 62 ? TYR A 53 THR A 62
AA1 3 VAL A 2 ? SER A 9 ? VAL A 2 SER A 9
AA1 4 ASP A 95 ? PHE A 101 ? ASP A 95 PHE A 101
AA2 1 SER A 31 ? VAL A 36 ? SER A 31 VAL A 36
AA2 2 TYR A 53 ? THR A 62 ? TYR A 53 THR A 62
AA2 3 TYR A 40 ? THR A 42 ? TYR A 40 THR A 42
AA2 4 ASN A 156 ? LYS A 157 ? ASN A 156 LYS A 157
AA3 1 ILE A 106 ? ASN A 107 ? ILE A 106 ASN A 107
AA3 2 THR A 112 ? VAL A 113 ? THR A 112 VAL A 113
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N LEU A 34 ? N LEU A 34 O ALA A 59 ? O ALA A 59
AA1 2 3 O LEU A 60 ? O LEU A 60 N ALA A 3 ? N ALA A 3
AA1 3 4 N ALA A 6 ? N ALA A 6 O ASP A 97 ? O ASP A 97
AA2 1 2 N LEU A 34 ? N LEU A 34 O ALA A 59 ? O ALA A 59
AA2 2 3 O TYR A 53 ? O TYR A 53 N THR A 42 ? N THR A 42
AA2 3 4 N ARG A 41 ? N ARG A 41 O ASN A 156 ? O ASN A 156
AA3 1 2 N ILE A 106 ? N ILE A 106 O VAL A 113 ? O VAL A 113
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id A
_struct_site.pdbx_auth_comp_id H73
_struct_site.pdbx_auth_seq_id 201
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 25
_struct_site.details 'binding site for residue H73 A 201'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 25 LYS A 23 ? LYS A 23 . ? 4_456 ?
2 AC1 25 THR A 42 ? THR A 42 . ? 1_555 ?
3 AC1 25 PRO A 43 ? PRO A 43 . ? 1_555 ?
4 AC1 25 LEU A 45 ? LEU A 45 . ? 1_555 ?
5 AC1 25 TYR A 53 ? TYR A 53 . ? 1_555 ?
6 AC1 25 ASN A 55 ? ASN A 55 . ? 1_555 ?
7 AC1 25 GLN A 74 ? GLN A 74 . ? 1_555 ?
8 AC1 25 TRP A 89 ? TRP A 89 . ? 1_555 ?
9 AC1 25 GLY A 90 ? GLY A 90 . ? 1_555 ?
10 AC1 25 ASP A 95 ? ASP A 95 . ? 1_555 ?
11 AC1 25 ASP A 97 ? ASP A 97 . ? 1_555 ?
12 AC1 25 ILE A 98 ? ILE A 98 . ? 1_555 ?
13 AC1 25 ARG A 110 ? ARG A 110 . ? 1_555 ?
14 AC1 25 THR A 112 ? THR A 112 . ? 1_555 ?
15 AC1 25 HIS A 115 ? HIS A 115 . ? 1_555 ?
16 AC1 25 TYR A 116 ? TYR A 116 . ? 1_555 ?
17 AC1 25 ARG A 121 ? ARG A 121 . ? 1_555 ?
18 AC1 25 PHE A 123 ? PHE A 123 . ? 1_555 ?
19 AC1 25 HIS A 148 ? HIS A 148 . ? 1_556 ?
20 AC1 25 HOH C . ? HOH A 303 . ? 1_555 ?
21 AC1 25 HOH C . ? HOH A 360 . ? 1_555 ?
22 AC1 25 HOH C . ? HOH A 371 . ? 1_555 ?
23 AC1 25 HOH C . ? HOH A 376 . ? 1_555 ?
24 AC1 25 HOH C . ? HOH A 387 . ? 1_555 ?
25 AC1 25 HOH C . ? HOH A 389 . ? 1_555 ?
#
_atom_sites.entry_id 7KDO
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.fract_transf_matrix[1][1] 0.018864
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.014267
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.027570
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
_atom_type.scat_dispersion_real
_atom_type.scat_dispersion_imag
_atom_type.scat_Cromer_Mann_a1
_atom_type.scat_Cromer_Mann_a2
_atom_type.scat_Cromer_Mann_a3
_atom_type.scat_Cromer_Mann_a4
_atom_type.scat_Cromer_Mann_b1
_atom_type.scat_Cromer_Mann_b2
_atom_type.scat_Cromer_Mann_b3
_atom_type.scat_Cromer_Mann_b4
_atom_type.scat_Cromer_Mann_c
_atom_type.scat_source
_atom_type.scat_dispersion_source
C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0
;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
;
?
H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0
;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
;
?
N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0
;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
;
?
O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0
;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
;
?
S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0
;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
;
?
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 THR 1 1 1 THR THR A . n
A 1 2 VAL 2 2 2 VAL VAL A . n
A 1 3 ALA 3 3 3 ALA ALA A . n
A 1 4 TYR 4 4 4 TYR TYR A . n
A 1 5 ILE 5 5 5 ILE ILE A . n
A 1 6 ALA 6 6 6 ALA ALA A . n
A 1 7 ILE 7 7 7 ILE ILE A . n
A 1 8 GLY 8 8 8 GLY GLY A . n
A 1 9 SER 9 9 9 SER SER A . n
A 1 10 ASN 10 10 10 ASN ASN A . n
A 1 11 LEU 11 11 11 LEU LEU A . n
A 1 12 ALA 12 12 12 ALA ALA A . n
A 1 13 SER 13 13 13 SER SER A . n
A 1 14 PRO 14 14 14 PRO PRO A . n
A 1 15 LEU 15 15 15 LEU LEU A . n
A 1 16 GLU 16 16 16 GLU GLU A . n
A 1 17 GLN 17 17 17 GLN GLN A . n
A 1 18 VAL 18 18 18 VAL VAL A . n
A 1 19 ASN 19 19 19 ASN ASN A . n
A 1 20 ALA 20 20 20 ALA ALA A . n
A 1 21 ALA 21 21 21 ALA ALA A . n
A 1 22 LEU 22 22 22 LEU LEU A . n
A 1 23 LYS 23 23 23 LYS LYS A . n
A 1 24 ALA 24 24 24 ALA ALA A . n
A 1 25 LEU 25 25 25 LEU LEU A . n
A 1 26 GLY 26 26 26 GLY GLY A . n
A 1 27 ASP 27 27 27 ASP ASP A . n
A 1 28 ILE 28 28 28 ILE ILE A . n
A 1 29 PRO 29 29 29 PRO PRO A . n
A 1 30 GLU 30 30 30 GLU GLU A . n
A 1 31 SER 31 31 31 SER SER A . n
A 1 32 HIS 32 32 32 HIS HIS A . n
A 1 33 ILE 33 33 33 ILE ILE A . n
A 1 34 LEU 34 34 34 LEU LEU A . n
A 1 35 THR 35 35 35 THR THR A . n
A 1 36 VAL 36 36 36 VAL VAL A . n
A 1 37 SER 37 37 37 SER SER A . n
A 1 38 SER 38 38 38 SER SER A . n
A 1 39 PHE 39 39 39 PHE PHE A . n
A 1 40 TYR 40 40 40 TYR TYR A . n
A 1 41 ARG 41 41 41 ARG ARG A . n
A 1 42 THR 42 42 42 THR THR A . n
A 1 43 PRO 43 43 43 PRO PRO A . n
A 1 44 PRO 44 44 44 PRO PRO A . n
A 1 45 LEU 45 45 45 LEU LEU A . n
A 1 46 GLY 46 46 46 GLY GLY A . n
A 1 47 PRO 47 47 47 PRO PRO A . n
A 1 48 GLN 48 48 48 GLN GLN A . n
A 1 49 ASP 49 49 49 ASP ASP A . n
A 1 50 GLN 50 50 50 GLN GLN A . n
A 1 51 PRO 51 51 51 PRO PRO A . n
A 1 52 ASP 52 52 52 ASP ASP A . n
A 1 53 TYR 53 53 53 TYR TYR A . n
A 1 54 LEU 54 54 54 LEU LEU A . n
A 1 55 ASN 55 55 55 ASN ASN A . n
A 1 56 ALA 56 56 56 ALA ALA A . n
A 1 57 ALA 57 57 57 ALA ALA A . n
A 1 58 VAL 58 58 58 VAL VAL A . n
A 1 59 ALA 59 59 59 ALA ALA A . n
A 1 60 LEU 60 60 60 LEU LEU A . n
A 1 61 GLU 61 61 61 GLU GLU A . n
A 1 62 THR 62 62 62 THR THR A . n
A 1 63 SER 63 63 63 SER SER A . n
A 1 64 LEU 64 64 64 LEU LEU A . n
A 1 65 ALA 65 65 65 ALA ALA A . n
A 1 66 PRO 66 66 66 PRO PRO A . n
A 1 67 GLU 67 67 67 GLU GLU A . n
A 1 68 GLU 68 68 68 GLU GLU A . n
A 1 69 LEU 69 69 69 LEU LEU A . n
A 1 70 LEU 70 70 70 LEU LEU A . n
A 1 71 ASN 71 71 71 ASN ASN A . n
A 1 72 HIS 72 72 72 HIS HIS A . n
A 1 73 THR 73 73 73 THR THR A . n
A 1 74 GLN 74 74 74 GLN GLN A . n
A 1 75 ARG 75 75 75 ARG ARG A . n
A 1 76 ILE 76 76 76 ILE ILE A . n
A 1 77 GLU 77 77 77 GLU GLU A . n
A 1 78 LEU 78 78 78 LEU LEU A . n
A 1 79 GLN 79 79 79 GLN GLN A . n
A 1 80 GLN 80 80 80 GLN GLN A . n
A 1 81 GLY 81 81 81 GLY GLY A . n
A 1 82 ARG 82 82 82 ARG ARG A . n
A 1 83 VAL 83 83 83 VAL VAL A . n
A 1 84 ARG 84 84 ? ? ? A . n
A 1 85 LYS 85 85 ? ? ? A . n
A 1 86 ALA 86 86 ? ? ? A . n
A 1 87 GLU 87 87 87 GLU GLU A . n
A 1 88 ARG 88 88 88 ARG ARG A . n
A 1 89 TRP 89 89 89 TRP TRP A . n
A 1 90 GLY 90 90 90 GLY GLY A . n
A 1 91 PRO 91 91 91 PRO PRO A . n
A 1 92 ARG 92 92 92 ARG ARG A . n
A 1 93 THR 93 93 93 THR THR A . n
A 1 94 LEU 94 94 94 LEU LEU A . n
A 1 95 ASP 95 95 95 ASP ASP A . n
A 1 96 LEU 96 96 96 LEU LEU A . n
A 1 97 ASP 97 97 97 ASP ASP A . n
A 1 98 ILE 98 98 98 ILE ILE A . n
A 1 99 MET 99 99 99 MET MET A . n
A 1 100 LEU 100 100 100 LEU LEU A . n
A 1 101 PHE 101 101 101 PHE PHE A . n
A 1 102 GLY 102 102 102 GLY GLY A . n
A 1 103 ASN 103 103 103 ASN ASN A . n
A 1 104 GLU 104 104 104 GLU GLU A . n
A 1 105 VAL 105 105 105 VAL VAL A . n
A 1 106 ILE 106 106 106 ILE ILE A . n
A 1 107 ASN 107 107 107 ASN ASN A . n
A 1 108 THR 108 108 108 THR THR A . n
A 1 109 GLU 109 109 109 GLU GLU A . n
A 1 110 ARG 110 110 110 ARG ARG A . n
A 1 111 LEU 111 111 111 LEU LEU A . n
A 1 112 THR 112 112 112 THR THR A . n
A 1 113 VAL 113 113 113 VAL VAL A . n
A 1 114 PRO 114 114 114 PRO PRO A . n
A 1 115 HIS 115 115 115 HIS HIS A . n
A 1 116 TYR 116 116 116 TYR TYR A . n
A 1 117 ASP 117 117 117 ASP ASP A . n
A 1 118 MET 118 118 118 MET MET A . n
A 1 119 LYS 119 119 119 LYS LYS A . n
A 1 120 ASN 120 120 120 ASN ASN A . n
A 1 121 ARG 121 121 121 ARG ARG A . n
A 1 122 GLY 122 122 122 GLY GLY A . n
A 1 123 PHE 123 123 123 PHE PHE A . n
A 1 124 MET 124 124 124 MET MET A . n
A 1 125 LEU 125 125 125 LEU LEU A . n
A 1 126 TRP 126 126 126 TRP TRP A . n
A 1 127 PRO 127 127 127 PRO PRO A . n
A 1 128 LEU 128 128 128 LEU LEU A . n
A 1 129 PHE 129 129 129 PHE PHE A . n
A 1 130 GLU 130 130 130 GLU GLU A . n
A 1 131 ILE 131 131 131 ILE ILE A . n
A 1 132 ALA 132 132 132 ALA ALA A . n
A 1 133 PRO 133 133 133 PRO PRO A . n
A 1 134 GLU 134 134 134 GLU GLU A . n
A 1 135 LEU 135 135 135 LEU LEU A . n
A 1 136 VAL 136 136 136 VAL VAL A . n
A 1 137 PHE 137 137 137 PHE PHE A . n
A 1 138 PRO 138 138 138 PRO PRO A . n
A 1 139 ASP 139 139 139 ASP ASP A . n
A 1 140 GLY 140 140 140 GLY GLY A . n
A 1 141 GLU 141 141 141 GLU GLU A . n
A 1 142 MET 142 142 142 MET MET A . n
A 1 143 LEU 143 143 143 LEU LEU A . n
A 1 144 ARG 144 144 144 ARG ARG A . n
A 1 145 GLN 145 145 145 GLN GLN A . n
A 1 146 ILE 146 146 146 ILE ILE A . n
A 1 147 LEU 147 147 147 LEU LEU A . n
A 1 148 HIS 148 148 148 HIS HIS A . n
A 1 149 THR 149 149 149 THR THR A . n
A 1 150 ARG 150 150 150 ARG ARG A . n
A 1 151 ALA 151 151 151 ALA ALA A . n
A 1 152 PHE 152 152 152 PHE PHE A . n
A 1 153 ASP 153 153 153 ASP ASP A . n
A 1 154 LYS 154 154 154 LYS LYS A . n
A 1 155 LEU 155 155 155 LEU LEU A . n
A 1 156 ASN 156 156 156 ASN ASN A . n
A 1 157 LYS 157 157 157 LYS LYS A . n
A 1 158 TRP 158 158 158 TRP TRP A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 H73 1 201 171 H73 H73 A .
C 3 HOH 1 301 73 HOH HOH A .
C 3 HOH 2 302 110 HOH HOH A .
C 3 HOH 3 303 166 HOH HOH A .
C 3 HOH 4 304 47 HOH HOH A .
C 3 HOH 5 305 167 HOH HOH A .
C 3 HOH 6 306 163 HOH HOH A .
C 3 HOH 7 307 89 HOH HOH A .
C 3 HOH 8 308 97 HOH HOH A .
C 3 HOH 9 309 87 HOH HOH A .
C 3 HOH 10 310 162 HOH HOH A .
C 3 HOH 11 311 160 HOH HOH A .
C 3 HOH 12 312 88 HOH HOH A .
C 3 HOH 13 313 169 HOH HOH A .
C 3 HOH 14 314 102 HOH HOH A .
C 3 HOH 15 315 42 HOH HOH A .
C 3 HOH 16 316 157 HOH HOH A .
C 3 HOH 17 317 29 HOH HOH A .
C 3 HOH 18 318 75 HOH HOH A .
C 3 HOH 19 319 39 HOH HOH A .
C 3 HOH 20 320 45 HOH HOH A .
C 3 HOH 21 321 35 HOH HOH A .
C 3 HOH 22 322 76 HOH HOH A .
C 3 HOH 23 323 72 HOH HOH A .
C 3 HOH 24 324 161 HOH HOH A .
C 3 HOH 25 325 3 HOH HOH A .
C 3 HOH 26 326 32 HOH HOH A .
C 3 HOH 27 327 91 HOH HOH A .
C 3 HOH 28 328 82 HOH HOH A .
C 3 HOH 29 329 99 HOH HOH A .
C 3 HOH 30 330 95 HOH HOH A .
C 3 HOH 31 331 159 HOH HOH A .
C 3 HOH 32 332 21 HOH HOH A .
C 3 HOH 33 333 77 HOH HOH A .
C 3 HOH 34 334 43 HOH HOH A .
C 3 HOH 35 335 65 HOH HOH A .
C 3 HOH 36 336 142 HOH HOH A .
C 3 HOH 37 337 116 HOH HOH A .
C 3 HOH 38 338 19 HOH HOH A .
C 3 HOH 39 339 37 HOH HOH A .
C 3 HOH 40 340 58 HOH HOH A .
C 3 HOH 41 341 33 HOH HOH A .
C 3 HOH 42 342 22 HOH HOH A .
C 3 HOH 43 343 80 HOH HOH A .
C 3 HOH 44 344 158 HOH HOH A .
C 3 HOH 45 345 18 HOH HOH A .
C 3 HOH 46 346 71 HOH HOH A .
C 3 HOH 47 347 15 HOH HOH A .
C 3 HOH 48 348 136 HOH HOH A .
C 3 HOH 49 349 57 HOH HOH A .
C 3 HOH 50 350 8 HOH HOH A .
C 3 HOH 51 351 46 HOH HOH A .
C 3 HOH 52 352 38 HOH HOH A .
C 3 HOH 53 353 48 HOH HOH A .
C 3 HOH 54 354 55 HOH HOH A .
C 3 HOH 55 355 9 HOH HOH A .
C 3 HOH 56 356 49 HOH HOH A .
C 3 HOH 57 357 25 HOH HOH A .
C 3 HOH 58 358 6 HOH HOH A .
C 3 HOH 59 359 145 HOH HOH A .
C 3 HOH 60 360 152 HOH HOH A .
C 3 HOH 61 361 118 HOH HOH A .
C 3 HOH 62 362 93 HOH HOH A .
C 3 HOH 63 363 150 HOH HOH A .
C 3 HOH 64 364 40 HOH HOH A .
C 3 HOH 65 365 2 HOH HOH A .
C 3 HOH 66 366 27 HOH HOH A .
C 3 HOH 67 367 23 HOH HOH A .
C 3 HOH 68 368 59 HOH HOH A .
C 3 HOH 69 369 53 HOH HOH A .
C 3 HOH 70 370 4 HOH HOH A .
C 3 HOH 71 371 34 HOH HOH A .
C 3 HOH 72 372 133 HOH HOH A .
C 3 HOH 73 373 120 HOH HOH A .
C 3 HOH 74 374 64 HOH HOH A .
C 3 HOH 75 375 123 HOH HOH A .
C 3 HOH 76 376 50 HOH HOH A .
C 3 HOH 77 377 153 HOH HOH A .
C 3 HOH 78 378 7 HOH HOH A .
C 3 HOH 79 379 1 HOH HOH A .
C 3 HOH 80 380 51 HOH HOH A .
C 3 HOH 81 381 69 HOH HOH A .
C 3 HOH 82 382 119 HOH HOH A .
C 3 HOH 83 383 107 HOH HOH A .
C 3 HOH 84 384 165 HOH HOH A .
C 3 HOH 85 385 20 HOH HOH A .
C 3 HOH 86 386 31 HOH HOH A .
C 3 HOH 87 387 16 HOH HOH A .
C 3 HOH 88 388 101 HOH HOH A .
C 3 HOH 89 389 12 HOH HOH A .
C 3 HOH 90 390 156 HOH HOH A .
C 3 HOH 91 391 141 HOH HOH A .
C 3 HOH 92 392 61 HOH HOH A .
C 3 HOH 93 393 127 HOH HOH A .
C 3 HOH 94 394 11 HOH HOH A .
C 3 HOH 95 395 90 HOH HOH A .
C 3 HOH 96 396 30 HOH HOH A .
C 3 HOH 97 397 17 HOH HOH A .
C 3 HOH 98 398 24 HOH HOH A .
C 3 HOH 99 399 44 HOH HOH A .
C 3 HOH 100 400 138 HOH HOH A .
C 3 HOH 101 401 103 HOH HOH A .
C 3 HOH 102 402 128 HOH HOH A .
C 3 HOH 103 403 14 HOH HOH A .
C 3 HOH 104 404 170 HOH HOH A .
C 3 HOH 105 405 36 HOH HOH A .
C 3 HOH 106 406 132 HOH HOH A .
C 3 HOH 107 407 5 HOH HOH A .
C 3 HOH 108 408 151 HOH HOH A .
C 3 HOH 109 409 112 HOH HOH A .
C 3 HOH 110 410 28 HOH HOH A .
C 3 HOH 111 411 74 HOH HOH A .
C 3 HOH 112 412 135 HOH HOH A .
C 3 HOH 113 413 117 HOH HOH A .
C 3 HOH 114 414 115 HOH HOH A .
C 3 HOH 115 415 149 HOH HOH A .
C 3 HOH 116 416 26 HOH HOH A .
C 3 HOH 117 417 105 HOH HOH A .
C 3 HOH 118 418 100 HOH HOH A .
C 3 HOH 119 419 164 HOH HOH A .
C 3 HOH 120 420 10 HOH HOH A .
C 3 HOH 121 421 79 HOH HOH A .
C 3 HOH 122 422 126 HOH HOH A .
C 3 HOH 123 423 81 HOH HOH A .
C 3 HOH 124 424 52 HOH HOH A .
C 3 HOH 125 425 68 HOH HOH A .
C 3 HOH 126 426 146 HOH HOH A .
C 3 HOH 127 427 114 HOH HOH A .
C 3 HOH 128 428 63 HOH HOH A .
C 3 HOH 129 429 70 HOH HOH A .
C 3 HOH 130 430 113 HOH HOH A .
C 3 HOH 131 431 125 HOH HOH A .
C 3 HOH 132 432 62 HOH HOH A .
C 3 HOH 133 433 13 HOH HOH A .
C 3 HOH 134 434 78 HOH HOH A .
C 3 HOH 135 435 148 HOH HOH A .
C 3 HOH 136 436 134 HOH HOH A .
C 3 HOH 137 437 155 HOH HOH A .
C 3 HOH 138 438 85 HOH HOH A .
C 3 HOH 139 439 94 HOH HOH A .
C 3 HOH 140 440 121 HOH HOH A .
C 3 HOH 141 441 124 HOH HOH A .
C 3 HOH 142 442 41 HOH HOH A .
C 3 HOH 143 443 86 HOH HOH A .
C 3 HOH 144 444 168 HOH HOH A .
C 3 HOH 145 445 109 HOH HOH A .
C 3 HOH 146 446 92 HOH HOH A .
C 3 HOH 147 447 139 HOH HOH A .
C 3 HOH 148 448 129 HOH HOH A .
C 3 HOH 149 449 144 HOH HOH A .
C 3 HOH 150 450 54 HOH HOH A .
C 3 HOH 151 451 98 HOH HOH A .
C 3 HOH 152 452 108 HOH HOH A .
C 3 HOH 153 453 130 HOH HOH A .
C 3 HOH 154 454 83 HOH HOH A .
C 3 HOH 155 455 143 HOH HOH A .
C 3 HOH 156 456 111 HOH HOH A .
C 3 HOH 157 457 84 HOH HOH A .
C 3 HOH 158 458 67 HOH HOH A .
C 3 HOH 159 459 106 HOH HOH A .
C 3 HOH 160 460 140 HOH HOH A .
C 3 HOH 161 461 104 HOH HOH A .
C 3 HOH 162 462 56 HOH HOH A .
C 3 HOH 163 463 122 HOH HOH A .
C 3 HOH 164 464 131 HOH HOH A .
C 3 HOH 165 465 137 HOH HOH A .
C 3 HOH 166 466 154 HOH HOH A .
C 3 HOH 167 467 66 HOH HOH A .
C 3 HOH 168 468 96 HOH HOH A .
C 3 HOH 169 469 60 HOH HOH A .
C 3 HOH 170 470 147 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 401
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id C
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2020-12-02
2 'Structure model' 1 1 2021-02-03
3 'Structure model' 1 2 2023-10-18
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 3 'Structure model' chem_comp_atom
3 3 'Structure model' chem_comp_bond
4 3 'Structure model' database_2
5 3 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_volume'
2 2 'Structure model' '_citation.year'
3 3 'Structure model' '_database_2.pdbx_DOI'
4 3 'Structure model' '_database_2.pdbx_database_accession'
#
loop_
_space_group_symop.id
_space_group_symop.operation_xyz
1 x,y,z
2 x+1/2,-y+1/2,-z
3 -x+1/2,y+1/2,-z
4 -x,-y,z
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 1
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2
? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.16 3
? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4
? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.7.3 5
#
_pdbx_entry_details.entry_id 7KDO
_pdbx_entry_details.has_ligand_of_interest Y
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id ALA
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 132
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi -148.68
_pdbx_validate_torsion.psi 59.74
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A ARG 84 ? A ARG 84
2 1 Y 1 A LYS 85 ? A LYS 85
3 1 Y 1 A ALA 86 ? A ALA 86
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
GLN N N N N 74
GLN CA C N S 75
GLN C C N N 76
GLN O O N N 77
GLN CB C N N 78
GLN CG C N N 79
GLN CD C N N 80
GLN OE1 O N N 81
GLN NE2 N N N 82
GLN OXT O N N 83
GLN H H N N 84
GLN H2 H N N 85
GLN HA H N N 86
GLN HB2 H N N 87
GLN HB3 H N N 88
GLN HG2 H N N 89
GLN HG3 H N N 90
GLN HE21 H N N 91
GLN HE22 H N N 92
GLN HXT H N N 93
GLU N N N N 94
GLU CA C N S 95
GLU C C N N 96
GLU O O N N 97
GLU CB C N N 98
GLU CG C N N 99
GLU CD C N N 100
GLU OE1 O N N 101
GLU OE2 O N N 102
GLU OXT O N N 103
GLU H H N N 104
GLU H2 H N N 105
GLU HA H N N 106
GLU HB2 H N N 107
GLU HB3 H N N 108
GLU HG2 H N N 109
GLU HG3 H N N 110
GLU HE2 H N N 111
GLU HXT H N N 112
GLY N N N N 113
GLY CA C N N 114
GLY C C N N 115
GLY O O N N 116
GLY OXT O N N 117
GLY H H N N 118
GLY H2 H N N 119
GLY HA2 H N N 120
GLY HA3 H N N 121
GLY HXT H N N 122
H73 C01 C N N 123
H73 C1 C N S 124
H73 C10 C N N 125
H73 C11 C N R 126
H73 C12 C N N 127
H73 C13 C N R 128
H73 C14 C N N 129
H73 C15 C N N 130
H73 C16 C N N 131
H73 C18 C N N 132
H73 C19 C N N 133
H73 C2 C N S 134
H73 C20 C N N 135
H73 C21 C N N 136
H73 C22 C N N 137
H73 C23 C N N 138
H73 C24 C N N 139
H73 C25 C N N 140
H73 C26 C N N 141
H73 C27 C N N 142
H73 C3 C N R 143
H73 C4 C N R 144
H73 C5 C Y N 145
H73 C6 C Y N 146
H73 C7 C Y N 147
H73 C8 C Y N 148
H73 C9 C Y N 149
H73 N1 N Y N 150
H73 N10 N N N 151
H73 N11 N N N 152
H73 N12 N N N 153
H73 N2 N Y N 154
H73 N28 N N N 155
H73 N3 N N N 156
H73 N4 N Y N 157
H73 N5 N Y N 158
H73 N6 N N N 159
H73 N8 N N N 160
H73 N9 N N N 161
H73 O01 O N N 162
H73 O03 O N N 163
H73 O1 O N N 164
H73 O2 O N N 165
H73 O3 O N N 166
H73 O4 O N N 167
H73 O5 O N N 168
H73 S1 S N N 169
H73 H1 H N N 170
H73 H10A H N N 171
H73 H10 H N N 172
H73 H11 H N N 173
H73 H12 H N N 174
H73 H12A H N N 175
H73 H02 H N N 176
H73 H14A H N N 177
H73 H14 H N N 178
H73 H15A H N N 179
H73 H15 H N N 180
H73 H16 H N N 181
H73 H16A H N N 182
H73 H2 H N N 183
H73 H23B H N N 184
H73 H23A H N N 185
H73 H23 H N N 186
H73 H24A H N N 187
H73 H24B H N N 188
H73 H24 H N N 189
H73 H27 H N N 190
H73 H27A H N N 191
H73 H3 H N N 192
H73 H4 H N N 193
H73 H5 H N N 194
H73 H8 H N N 195
H73 HN10 H N N 196
H73 HN12 H N N 197
H73 HN28 H N N 198
H73 HN3A H N N 199
H73 HN3 H N N 200
H73 HN9 H N N 201
H73 HN9A H N N 202
H73 H7 H N N 203
H73 HO2 H N N 204
H73 HO3 H N N 205
HIS N N N N 206
HIS CA C N S 207
HIS C C N N 208
HIS O O N N 209
HIS CB C N N 210
HIS CG C Y N 211
HIS ND1 N Y N 212
HIS CD2 C Y N 213
HIS CE1 C Y N 214
HIS NE2 N Y N 215
HIS OXT O N N 216
HIS H H N N 217
HIS H2 H N N 218
HIS HA H N N 219
HIS HB2 H N N 220
HIS HB3 H N N 221
HIS HD1 H N N 222
HIS HD2 H N N 223
HIS HE1 H N N 224
HIS HE2 H N N 225
HIS HXT H N N 226
HOH O O N N 227
HOH H1 H N N 228
HOH H2 H N N 229
ILE N N N N 230
ILE CA C N S 231
ILE C C N N 232
ILE O O N N 233
ILE CB C N S 234
ILE CG1 C N N 235
ILE CG2 C N N 236
ILE CD1 C N N 237
ILE OXT O N N 238
ILE H H N N 239
ILE H2 H N N 240
ILE HA H N N 241
ILE HB H N N 242
ILE HG12 H N N 243
ILE HG13 H N N 244
ILE HG21 H N N 245
ILE HG22 H N N 246
ILE HG23 H N N 247
ILE HD11 H N N 248
ILE HD12 H N N 249
ILE HD13 H N N 250
ILE HXT H N N 251
LEU N N N N 252
LEU CA C N S 253
LEU C C N N 254
LEU O O N N 255
LEU CB C N N 256
LEU CG C N N 257
LEU CD1 C N N 258
LEU CD2 C N N 259
LEU OXT O N N 260
LEU H H N N 261
LEU H2 H N N 262
LEU HA H N N 263
LEU HB2 H N N 264
LEU HB3 H N N 265
LEU HG H N N 266
LEU HD11 H N N 267
LEU HD12 H N N 268
LEU HD13 H N N 269
LEU HD21 H N N 270
LEU HD22 H N N 271
LEU HD23 H N N 272
LEU HXT H N N 273
LYS N N N N 274
LYS CA C N S 275
LYS C C N N 276
LYS O O N N 277
LYS CB C N N 278
LYS CG C N N 279
LYS CD C N N 280
LYS CE C N N 281
LYS NZ N N N 282
LYS OXT O N N 283
LYS H H N N 284
LYS H2 H N N 285
LYS HA H N N 286
LYS HB2 H N N 287
LYS HB3 H N N 288
LYS HG2 H N N 289
LYS HG3 H N N 290
LYS HD2 H N N 291
LYS HD3 H N N 292
LYS HE2 H N N 293
LYS HE3 H N N 294
LYS HZ1 H N N 295
LYS HZ2 H N N 296
LYS HZ3 H N N 297
LYS HXT H N N 298
MET N N N N 299
MET CA C N S 300
MET C C N N 301
MET O O N N 302
MET CB C N N 303
MET CG C N N 304
MET SD S N N 305
MET CE C N N 306
MET OXT O N N 307
MET H H N N 308
MET H2 H N N 309
MET HA H N N 310
MET HB2 H N N 311
MET HB3 H N N 312
MET HG2 H N N 313
MET HG3 H N N 314
MET HE1 H N N 315
MET HE2 H N N 316
MET HE3 H N N 317
MET HXT H N N 318
PHE N N N N 319
PHE CA C N S 320
PHE C C N N 321
PHE O O N N 322
PHE CB C N N 323
PHE CG C Y N 324
PHE CD1 C Y N 325
PHE CD2 C Y N 326
PHE CE1 C Y N 327
PHE CE2 C Y N 328
PHE CZ C Y N 329
PHE OXT O N N 330
PHE H H N N 331
PHE H2 H N N 332
PHE HA H N N 333
PHE HB2 H N N 334
PHE HB3 H N N 335
PHE HD1 H N N 336
PHE HD2 H N N 337
PHE HE1 H N N 338
PHE HE2 H N N 339
PHE HZ H N N 340
PHE HXT H N N 341
PRO N N N N 342
PRO CA C N S 343
PRO C C N N 344
PRO O O N N 345
PRO CB C N N 346
PRO CG C N N 347
PRO CD C N N 348
PRO OXT O N N 349
PRO H H N N 350
PRO HA H N N 351
PRO HB2 H N N 352
PRO HB3 H N N 353
PRO HG2 H N N 354
PRO HG3 H N N 355
PRO HD2 H N N 356
PRO HD3 H N N 357
PRO HXT H N N 358
SER N N N N 359
SER CA C N S 360
SER C C N N 361
SER O O N N 362
SER CB C N N 363
SER OG O N N 364
SER OXT O N N 365
SER H H N N 366
SER H2 H N N 367
SER HA H N N 368
SER HB2 H N N 369
SER HB3 H N N 370
SER HG H N N 371
SER HXT H N N 372
THR N N N N 373
THR CA C N S 374
THR C C N N 375
THR O O N N 376
THR CB C N R 377
THR OG1 O N N 378
THR CG2 C N N 379
THR OXT O N N 380
THR H H N N 381
THR H2 H N N 382
THR HA H N N 383
THR HB H N N 384
THR HG1 H N N 385
THR HG21 H N N 386
THR HG22 H N N 387
THR HG23 H N N 388
THR HXT H N N 389
TRP N N N N 390
TRP CA C N S 391
TRP C C N N 392
TRP O O N N 393
TRP CB C N N 394
TRP CG C Y N 395
TRP CD1 C Y N 396
TRP CD2 C Y N 397
TRP NE1 N Y N 398
TRP CE2 C Y N 399
TRP CE3 C Y N 400
TRP CZ2 C Y N 401
TRP CZ3 C Y N 402
TRP CH2 C Y N 403
TRP OXT O N N 404
TRP H H N N 405
TRP H2 H N N 406
TRP HA H N N 407
TRP HB2 H N N 408
TRP HB3 H N N 409
TRP HD1 H N N 410
TRP HE1 H N N 411
TRP HE3 H N N 412
TRP HZ2 H N N 413
TRP HZ3 H N N 414
TRP HH2 H N N 415
TRP HXT H N N 416
TYR N N N N 417
TYR CA C N S 418
TYR C C N N 419
TYR O O N N 420
TYR CB C N N 421
TYR CG C Y N 422
TYR CD1 C Y N 423
TYR CD2 C Y N 424
TYR CE1 C Y N 425
TYR CE2 C Y N 426
TYR CZ C Y N 427
TYR OH O N N 428
TYR OXT O N N 429
TYR H H N N 430
TYR H2 H N N 431
TYR HA H N N 432
TYR HB2 H N N 433
TYR HB3 H N N 434
TYR HD1 H N N 435
TYR HD2 H N N 436
TYR HE1 H N N 437
TYR HE2 H N N 438
TYR HH H N N 439
TYR HXT H N N 440
VAL N N N N 441
VAL CA C N S 442
VAL C C N N 443
VAL O O N N 444
VAL CB C N N 445
VAL CG1 C N N 446
VAL CG2 C N N 447
VAL OXT O N N 448
VAL H H N N 449
VAL H2 H N N 450
VAL HA H N N 451
VAL HB H N N 452
VAL HG11 H N N 453
VAL HG12 H N N 454
VAL HG13 H N N 455
VAL HG21 H N N 456
VAL HG22 H N N 457
VAL HG23 H N N 458
VAL HXT H N N 459
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
GLN N CA sing N N 70
GLN N H sing N N 71
GLN N H2 sing N N 72
GLN CA C sing N N 73
GLN CA CB sing N N 74
GLN CA HA sing N N 75
GLN C O doub N N 76
GLN C OXT sing N N 77
GLN CB CG sing N N 78
GLN CB HB2 sing N N 79
GLN CB HB3 sing N N 80
GLN CG CD sing N N 81
GLN CG HG2 sing N N 82
GLN CG HG3 sing N N 83
GLN CD OE1 doub N N 84
GLN CD NE2 sing N N 85
GLN NE2 HE21 sing N N 86
GLN NE2 HE22 sing N N 87
GLN OXT HXT sing N N 88
GLU N CA sing N N 89
GLU N H sing N N 90
GLU N H2 sing N N 91
GLU CA C sing N N 92
GLU CA CB sing N N 93
GLU CA HA sing N N 94
GLU C O doub N N 95
GLU C OXT sing N N 96
GLU CB CG sing N N 97
GLU CB HB2 sing N N 98
GLU CB HB3 sing N N 99
GLU CG CD sing N N 100
GLU CG HG2 sing N N 101
GLU CG HG3 sing N N 102
GLU CD OE1 doub N N 103
GLU CD OE2 sing N N 104
GLU OE2 HE2 sing N N 105
GLU OXT HXT sing N N 106
GLY N CA sing N N 107
GLY N H sing N N 108
GLY N H2 sing N N 109
GLY CA C sing N N 110
GLY CA HA2 sing N N 111
GLY CA HA3 sing N N 112
GLY C O doub N N 113
GLY C OXT sing N N 114
GLY OXT HXT sing N N 115
H73 N9 C19 sing N N 116
H73 C19 N10 sing N N 117
H73 C19 N8 doub N N 118
H73 N10 C20 sing N N 119
H73 N8 C25 sing N N 120
H73 C20 O5 doub N N 121
H73 C20 C26 sing N N 122
H73 C25 C26 doub N N 123
H73 C25 N12 sing N N 124
H73 C26 N11 sing N N 125
H73 N12 C22 sing N N 126
H73 C24 C22 sing N N 127
H73 N11 C21 doub N N 128
H73 C22 C21 sing N N 129
H73 C22 C23 sing N N 130
H73 C21 C18 sing N N 131
H73 O01 C01 doub N N 132
H73 N3 C7 sing N N 133
H73 C18 N28 sing N N 134
H73 C18 O4 doub N N 135
H73 C01 O03 sing N N 136
H73 C01 C13 sing N N 137
H73 C16 C27 sing N N 138
H73 C16 N6 sing N N 139
H73 N28 C27 sing N N 140
H73 C7 N4 doub Y N 141
H73 C7 C6 sing Y N 142
H73 N6 C13 sing N N 143
H73 N6 C14 sing N N 144
H73 N4 C8 sing Y N 145
H73 N2 C6 sing Y N 146
H73 N2 C5 doub Y N 147
H73 C13 C12 sing N N 148
H73 C6 C9 doub Y N 149
H73 C12 C11 sing N N 150
H73 C14 C15 sing N N 151
H73 C8 N5 doub Y N 152
H73 C5 N1 sing Y N 153
H73 C9 N5 sing Y N 154
H73 C9 N1 sing Y N 155
H73 C15 C11 sing N N 156
H73 C11 S1 sing N N 157
H73 N1 C4 sing N N 158
H73 O1 C4 sing N N 159
H73 O1 C1 sing N N 160
H73 C4 C3 sing N N 161
H73 S1 C10 sing N N 162
H73 C10 C1 sing N N 163
H73 C1 C2 sing N N 164
H73 C3 C2 sing N N 165
H73 C3 O3 sing N N 166
H73 C2 O2 sing N N 167
H73 C1 H1 sing N N 168
H73 C10 H10A sing N N 169
H73 C10 H10 sing N N 170
H73 C11 H11 sing N N 171
H73 C12 H12 sing N N 172
H73 C12 H12A sing N N 173
H73 C13 H02 sing N N 174
H73 C14 H14A sing N N 175
H73 C14 H14 sing N N 176
H73 C15 H15A sing N N 177
H73 C15 H15 sing N N 178
H73 C16 H16 sing N N 179
H73 C16 H16A sing N N 180
H73 C2 H2 sing N N 181
H73 C23 H23B sing N N 182
H73 C23 H23A sing N N 183
H73 C23 H23 sing N N 184
H73 C24 H24A sing N N 185
H73 C24 H24B sing N N 186
H73 C24 H24 sing N N 187
H73 C27 H27 sing N N 188
H73 C27 H27A sing N N 189
H73 C3 H3 sing N N 190
H73 C4 H4 sing N N 191
H73 C5 H5 sing N N 192
H73 C8 H8 sing N N 193
H73 N10 HN10 sing N N 194
H73 N12 HN12 sing N N 195
H73 N28 HN28 sing N N 196
H73 N3 HN3A sing N N 197
H73 N3 HN3 sing N N 198
H73 N9 HN9 sing N N 199
H73 N9 HN9A sing N N 200
H73 O03 H7 sing N N 201
H73 O2 HO2 sing N N 202
H73 O3 HO3 sing N N 203
HIS N CA sing N N 204
HIS N H sing N N 205
HIS N H2 sing N N 206
HIS CA C sing N N 207
HIS CA CB sing N N 208
HIS CA HA sing N N 209
HIS C O doub N N 210
HIS C OXT sing N N 211
HIS CB CG sing N N 212
HIS CB HB2 sing N N 213
HIS CB HB3 sing N N 214
HIS CG ND1 sing Y N 215
HIS CG CD2 doub Y N 216
HIS ND1 CE1 doub Y N 217
HIS ND1 HD1 sing N N 218
HIS CD2 NE2 sing Y N 219
HIS CD2 HD2 sing N N 220
HIS CE1 NE2 sing Y N 221
HIS CE1 HE1 sing N N 222
HIS NE2 HE2 sing N N 223
HIS OXT HXT sing N N 224
HOH O H1 sing N N 225
HOH O H2 sing N N 226
ILE N CA sing N N 227
ILE N H sing N N 228
ILE N H2 sing N N 229
ILE CA C sing N N 230
ILE CA CB sing N N 231
ILE CA HA sing N N 232
ILE C O doub N N 233
ILE C OXT sing N N 234
ILE CB CG1 sing N N 235
ILE CB CG2 sing N N 236
ILE CB HB sing N N 237
ILE CG1 CD1 sing N N 238
ILE CG1 HG12 sing N N 239
ILE CG1 HG13 sing N N 240
ILE CG2 HG21 sing N N 241
ILE CG2 HG22 sing N N 242
ILE CG2 HG23 sing N N 243
ILE CD1 HD11 sing N N 244
ILE CD1 HD12 sing N N 245
ILE CD1 HD13 sing N N 246
ILE OXT HXT sing N N 247
LEU N CA sing N N 248
LEU N H sing N N 249
LEU N H2 sing N N 250
LEU CA C sing N N 251
LEU CA CB sing N N 252
LEU CA HA sing N N 253
LEU C O doub N N 254
LEU C OXT sing N N 255
LEU CB CG sing N N 256
LEU CB HB2 sing N N 257
LEU CB HB3 sing N N 258
LEU CG CD1 sing N N 259
LEU CG CD2 sing N N 260
LEU CG HG sing N N 261
LEU CD1 HD11 sing N N 262
LEU CD1 HD12 sing N N 263
LEU CD1 HD13 sing N N 264
LEU CD2 HD21 sing N N 265
LEU CD2 HD22 sing N N 266
LEU CD2 HD23 sing N N 267
LEU OXT HXT sing N N 268
LYS N CA sing N N 269
LYS N H sing N N 270
LYS N H2 sing N N 271
LYS CA C sing N N 272
LYS CA CB sing N N 273
LYS CA HA sing N N 274
LYS C O doub N N 275
LYS C OXT sing N N 276
LYS CB CG sing N N 277
LYS CB HB2 sing N N 278
LYS CB HB3 sing N N 279
LYS CG CD sing N N 280
LYS CG HG2 sing N N 281
LYS CG HG3 sing N N 282
LYS CD CE sing N N 283
LYS CD HD2 sing N N 284
LYS CD HD3 sing N N 285
LYS CE NZ sing N N 286
LYS CE HE2 sing N N 287
LYS CE HE3 sing N N 288
LYS NZ HZ1 sing N N 289
LYS NZ HZ2 sing N N 290
LYS NZ HZ3 sing N N 291
LYS OXT HXT sing N N 292
MET N CA sing N N 293
MET N H sing N N 294
MET N H2 sing N N 295
MET CA C sing N N 296
MET CA CB sing N N 297
MET CA HA sing N N 298
MET C O doub N N 299
MET C OXT sing N N 300
MET CB CG sing N N 301
MET CB HB2 sing N N 302
MET CB HB3 sing N N 303
MET CG SD sing N N 304
MET CG HG2 sing N N 305
MET CG HG3 sing N N 306
MET SD CE sing N N 307
MET CE HE1 sing N N 308
MET CE HE2 sing N N 309
MET CE HE3 sing N N 310
MET OXT HXT sing N N 311
PHE N CA sing N N 312
PHE N H sing N N 313
PHE N H2 sing N N 314
PHE CA C sing N N 315
PHE CA CB sing N N 316
PHE CA HA sing N N 317
PHE C O doub N N 318
PHE C OXT sing N N 319
PHE CB CG sing N N 320
PHE CB HB2 sing N N 321
PHE CB HB3 sing N N 322
PHE CG CD1 doub Y N 323
PHE CG CD2 sing Y N 324
PHE CD1 CE1 sing Y N 325
PHE CD1 HD1 sing N N 326
PHE CD2 CE2 doub Y N 327
PHE CD2 HD2 sing N N 328
PHE CE1 CZ doub Y N 329
PHE CE1 HE1 sing N N 330
PHE CE2 CZ sing Y N 331
PHE CE2 HE2 sing N N 332
PHE CZ HZ sing N N 333
PHE OXT HXT sing N N 334
PRO N CA sing N N 335
PRO N CD sing N N 336
PRO N H sing N N 337
PRO CA C sing N N 338
PRO CA CB sing N N 339
PRO CA HA sing N N 340
PRO C O doub N N 341
PRO C OXT sing N N 342
PRO CB CG sing N N 343
PRO CB HB2 sing N N 344
PRO CB HB3 sing N N 345
PRO CG CD sing N N 346
PRO CG HG2 sing N N 347
PRO CG HG3 sing N N 348
PRO CD HD2 sing N N 349
PRO CD HD3 sing N N 350
PRO OXT HXT sing N N 351
SER N CA sing N N 352
SER N H sing N N 353
SER N H2 sing N N 354
SER CA C sing N N 355
SER CA CB sing N N 356
SER CA HA sing N N 357
SER C O doub N N 358
SER C OXT sing N N 359
SER CB OG sing N N 360
SER CB HB2 sing N N 361
SER CB HB3 sing N N 362
SER OG HG sing N N 363
SER OXT HXT sing N N 364
THR N CA sing N N 365
THR N H sing N N 366
THR N H2 sing N N 367
THR CA C sing N N 368
THR CA CB sing N N 369
THR CA HA sing N N 370
THR C O doub N N 371
THR C OXT sing N N 372
THR CB OG1 sing N N 373
THR CB CG2 sing N N 374
THR CB HB sing N N 375
THR OG1 HG1 sing N N 376
THR CG2 HG21 sing N N 377
THR CG2 HG22 sing N N 378
THR CG2 HG23 sing N N 379
THR OXT HXT sing N N 380
TRP N CA sing N N 381
TRP N H sing N N 382
TRP N H2 sing N N 383
TRP CA C sing N N 384
TRP CA CB sing N N 385
TRP CA HA sing N N 386
TRP C O doub N N 387
TRP C OXT sing N N 388
TRP CB CG sing N N 389
TRP CB HB2 sing N N 390
TRP CB HB3 sing N N 391
TRP CG CD1 doub Y N 392
TRP CG CD2 sing Y N 393
TRP CD1 NE1 sing Y N 394
TRP CD1 HD1 sing N N 395
TRP CD2 CE2 doub Y N 396
TRP CD2 CE3 sing Y N 397
TRP NE1 CE2 sing Y N 398
TRP NE1 HE1 sing N N 399
TRP CE2 CZ2 sing Y N 400
TRP CE3 CZ3 doub Y N 401
TRP CE3 HE3 sing N N 402
TRP CZ2 CH2 doub Y N 403
TRP CZ2 HZ2 sing N N 404
TRP CZ3 CH2 sing Y N 405
TRP CZ3 HZ3 sing N N 406
TRP CH2 HH2 sing N N 407
TRP OXT HXT sing N N 408
TYR N CA sing N N 409
TYR N H sing N N 410
TYR N H2 sing N N 411
TYR CA C sing N N 412
TYR CA CB sing N N 413
TYR CA HA sing N N 414
TYR C O doub N N 415
TYR C OXT sing N N 416
TYR CB CG sing N N 417
TYR CB HB2 sing N N 418
TYR CB HB3 sing N N 419
TYR CG CD1 doub Y N 420
TYR CG CD2 sing Y N 421
TYR CD1 CE1 sing Y N 422
TYR CD1 HD1 sing N N 423
TYR CD2 CE2 doub Y N 424
TYR CD2 HD2 sing N N 425
TYR CE1 CZ doub Y N 426
TYR CE1 HE1 sing N N 427
TYR CE2 CZ sing Y N 428
TYR CE2 HE2 sing N N 429
TYR CZ OH sing N N 430
TYR OH HH sing N N 431
TYR OXT HXT sing N N 432
VAL N CA sing N N 433
VAL N H sing N N 434
VAL N H2 sing N N 435
VAL CA C sing N N 436
VAL CA CB sing N N 437
VAL CA HA sing N N 438
VAL C O doub N N 439
VAL C OXT sing N N 440
VAL CB CG1 sing N N 441
VAL CB CG2 sing N N 442
VAL CB HB sing N N 443
VAL CG1 HG11 sing N N 444
VAL CG1 HG12 sing N N 445
VAL CG1 HG13 sing N N 446
VAL CG2 HG21 sing N N 447
VAL CG2 HG22 sing N N 448
VAL CG2 HG23 sing N N 449
VAL OXT HXT sing N N 450
#
_pdbx_entity_instance_feature.ordinal 1
_pdbx_entity_instance_feature.comp_id H73
_pdbx_entity_instance_feature.asym_id ?
_pdbx_entity_instance_feature.seq_num ?
_pdbx_entity_instance_feature.auth_comp_id H73
_pdbx_entity_instance_feature.auth_asym_id ?
_pdbx_entity_instance_feature.auth_seq_num ?
_pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION'
_pdbx_entity_instance_feature.details ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2
;5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine
;
H73
3 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 3UDV
_pdbx_initial_refinement_model.details ?
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support none
_pdbx_struct_assembly_auth_evidence.details ?
#
_space_group.name_H-M_alt 'P 21 21 2'
_space_group.name_Hall 'P 2 2ab'
_space_group.IT_number 18
_space_group.crystal_system orthorhombic
_space_group.id 1
#