data_7KDR # _entry.id 7KDR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7KDR pdb_00007kdr 10.2210/pdb7kdr/pdb WWPDB D_1000252326 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 7KDO _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7KDR _pdbx_database_status.recvd_initial_deposition_date 2020-10-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shaw, G.X.' 1 ? 'Shi, G.' 2 ? 'Ji, X.' 3 0000-0001-6942-1514 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary Bioorg.Med.Chem. BMECEP 1200 1464-3391 ? ? 29 ? 115847 115847 'Bisubstrate inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: Transition state analogs for high affinity binding.' 2021 ? 10.1016/j.bmc.2020.115847 33199204 ? ? ? ? ? ? ? ? US ? ? 1 'J. Med. Chem.' JMCMAR 0151 0022-2623 ? ? 44 ? 1364 1371 ;Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: Synthesis and biochemical and crystallographic studies ; 2001 ? 10.1021/jm0004493 11311059 ? ? ? ? ? ? ? ? UK ? ? 2 'Bioorg. Med. Chem.' BMECEP 1200 0968-0896 ? ? 20 ? 47 57 'Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties' 2012 ? 10.1016/j.bmc.2011.11.032 22169600 ? ? ? ? ? ? ? ? UK ? ? 3 'Bioorg. Med. Chem.' BMECEP 1200 0968-0896 ? ? 20 ? 4303 4309 'Bisubstrate analog inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New lead exhibits a distinct binding mode' 2012 ? 10.1016/j.bmc.2012.05.060 22727779 ? ? ? ? ? ? ? ? UK ? ? 4 'FEBS J.' ? ? 1742-464X ? ? 281 ? 4123 4134 ;Structural enzymology and inhibition of the bi-functional folate pathway enzyme HPPK-DHPS from the biowarfare agent Francisella tularensis ; 2014 ? 10.1111/febs.12896 24975935 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shi, G.' 1 ? primary 'Shaw, G.X.' 2 ? primary 'Zhu, F.' 3 ? primary 'Tarasov, S.G.' 4 ? primary 'Ji, X.' 5 ? 1 'Shi, G.' 6 ? 1 'Blaszczyk, J.' 7 ? 1 'Ji, X.' 8 0000-0001-6942-1514 1 'Yan, H.' 9 ? 2 'Shi, G.' 10 ? 2 'Shaw, G.' 11 ? 2 'Liang, Y.-H.' 12 ? 2 'Subburamann, P.' 13 ? 2 'Li, Y.' 14 ? 2 'Wu, Y.' 15 ? 2 'Yan, H.' 16 ? 2 'Ji, X.' 17 0000-0001-6942-1514 3 'Shi, G.' 18 ? 3 'Shaw, G.' 19 ? 3 'Li, Y.' 20 ? 3 'Wu, Y.' 21 ? 3 'Yan, H.' 22 ? 3 'Ji, X.' 23 0000-0001-6942-1514 4 'Shaw, G.X.' 24 ? 4 'Li, Y.' 25 ? 4 'Shi, G.' 26 ? 4 'Wu, Y.' 27 ? 4 'Cherry, S.' 28 ? 4 'Needle, D.' 29 ? 4 'Zhang, D.' 30 ? 4 'Tropea, J.E.' 31 ? 4 'Waugh, D.S.' 32 ? 4 'Yan, H.' 33 ? 4 'Ji, X.' 34 0000-0001-6942-1514 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 101.540 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7KDR _cell.details ? _cell.formula_units_Z ? _cell.length_a 61.446 _cell.length_a_esd ? _cell.length_b 42.797 _cell.length_b_esd ? _cell.length_c 56.283 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KDR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase' 17966.535 1 2.7.6.3 ? ? ? 2 non-polymer syn ;5'-{[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]sulfonyl}-5'-deoxyadenosine ; 704.715 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 5 water nat water 18.015 268 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase,PPPK,7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase,HPPK' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW ; _entity_poly.pdbx_seq_one_letter_code_can ;TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 VAL n 1 3 ALA n 1 4 TYR n 1 5 ILE n 1 6 ALA n 1 7 ILE n 1 8 GLY n 1 9 SER n 1 10 ASN n 1 11 LEU n 1 12 ALA n 1 13 SER n 1 14 PRO n 1 15 LEU n 1 16 GLU n 1 17 GLN n 1 18 VAL n 1 19 ASN n 1 20 ALA n 1 21 ALA n 1 22 LEU n 1 23 LYS n 1 24 ALA n 1 25 LEU n 1 26 GLY n 1 27 ASP n 1 28 ILE n 1 29 PRO n 1 30 GLU n 1 31 SER n 1 32 HIS n 1 33 ILE n 1 34 LEU n 1 35 THR n 1 36 VAL n 1 37 SER n 1 38 SER n 1 39 PHE n 1 40 TYR n 1 41 ARG n 1 42 THR n 1 43 PRO n 1 44 PRO n 1 45 LEU n 1 46 GLY n 1 47 PRO n 1 48 GLN n 1 49 ASP n 1 50 GLN n 1 51 PRO n 1 52 ASP n 1 53 TYR n 1 54 LEU n 1 55 ASN n 1 56 ALA n 1 57 ALA n 1 58 VAL n 1 59 ALA n 1 60 LEU n 1 61 GLU n 1 62 THR n 1 63 SER n 1 64 LEU n 1 65 ALA n 1 66 PRO n 1 67 GLU n 1 68 GLU n 1 69 LEU n 1 70 LEU n 1 71 ASN n 1 72 HIS n 1 73 THR n 1 74 GLN n 1 75 ARG n 1 76 ILE n 1 77 GLU n 1 78 LEU n 1 79 GLN n 1 80 GLN n 1 81 GLY n 1 82 ARG n 1 83 VAL n 1 84 ARG n 1 85 LYS n 1 86 ALA n 1 87 GLU n 1 88 ARG n 1 89 TRP n 1 90 GLY n 1 91 PRO n 1 92 ARG n 1 93 THR n 1 94 LEU n 1 95 ASP n 1 96 LEU n 1 97 ASP n 1 98 ILE n 1 99 MET n 1 100 LEU n 1 101 PHE n 1 102 GLY n 1 103 ASN n 1 104 GLU n 1 105 VAL n 1 106 ILE n 1 107 ASN n 1 108 THR n 1 109 GLU n 1 110 ARG n 1 111 LEU n 1 112 THR n 1 113 VAL n 1 114 PRO n 1 115 HIS n 1 116 TYR n 1 117 ASP n 1 118 MET n 1 119 LYS n 1 120 ASN n 1 121 ARG n 1 122 GLY n 1 123 PHE n 1 124 MET n 1 125 LEU n 1 126 TRP n 1 127 PRO n 1 128 LEU n 1 129 PHE n 1 130 GLU n 1 131 ILE n 1 132 ALA n 1 133 PRO n 1 134 GLU n 1 135 LEU n 1 136 VAL n 1 137 PHE n 1 138 PRO n 1 139 ASP n 1 140 GLY n 1 141 GLU n 1 142 MET n 1 143 LEU n 1 144 ARG n 1 145 GLN n 1 146 ILE n 1 147 LEU n 1 148 HIS n 1 149 THR n 1 150 ARG n 1 151 ALA n 1 152 PHE n 1 153 ASP n 1 154 LYS n 1 155 LEU n 1 156 ASN n 1 157 LYS n 1 158 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 158 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'folK, b0142, JW0138' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli (strain K12)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus(DE3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET17b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HPPK_ECOLI _struct_ref.pdbx_db_accession P26281 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7KDR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 158 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P26281 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 159 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 158 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 J1L non-polymer . ;5'-{[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]sulfonyl}-5'-deoxyadenosine ; ? 'C27 H36 N12 O9 S' 704.715 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7KDR _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity 1.498 _exptl_crystal.pdbx_mosaicity_esd 0.017 # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details PEG-8000 _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-02-20 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Mirror _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7KDR _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.480 _reflns.d_resolution_low 30.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 22571 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.600 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.400 _reflns.pdbx_Rmerge_I_obs 0.123 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.880 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.134 _reflns.pdbx_Rpim_I_all 0.053 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 122333 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.480 1.530 ? ? ? ? ? ? 1503 64.300 ? ? ? ? 0.325 ? ? ? ? ? ? ? ? 2.600 ? 0.848 ? ? 0.385 0.201 ? 1 1 0.875 ? ? 1.530 1.590 ? ? ? ? ? ? 2267 95.500 ? ? ? ? 0.320 ? ? ? ? ? ? ? ? 3.900 ? 0.863 ? ? 0.364 0.170 ? 2 1 0.900 ? ? 1.590 1.670 ? ? ? ? ? ? 2322 97.900 ? ? ? ? 0.302 ? ? ? ? ? ? ? ? 5.000 ? 0.939 ? ? 0.336 0.145 ? 3 1 0.927 ? ? 1.670 1.750 ? ? ? ? ? ? 2336 98.700 ? ? ? ? 0.264 ? ? ? ? ? ? ? ? 5.400 ? 0.911 ? ? 0.292 0.122 ? 4 1 0.946 ? ? 1.750 1.860 ? ? ? ? ? ? 2378 98.900 ? ? ? ? 0.235 ? ? ? ? ? ? ? ? 5.500 ? 0.984 ? ? 0.260 0.108 ? 5 1 0.956 ? ? 1.860 2.010 ? ? ? ? ? ? 2273 95.900 ? ? ? ? 0.201 ? ? ? ? ? ? ? ? 5.300 ? 0.702 ? ? 0.223 0.094 ? 6 1 0.961 ? ? 2.010 2.210 ? ? ? ? ? ? 2344 98.700 ? ? ? ? 0.179 ? ? ? ? ? ? ? ? 6.100 ? 0.789 ? ? 0.195 0.077 ? 7 1 0.975 ? ? 2.210 2.530 ? ? ? ? ? ? 2362 99.100 ? ? ? ? 0.164 ? ? ? ? ? ? ? ? 6.600 ? 0.919 ? ? 0.177 0.068 ? 8 1 0.976 ? ? 2.530 3.190 ? ? ? ? ? ? 2377 99.000 ? ? ? ? 0.127 ? ? ? ? ? ? ? ? 6.500 ? 0.922 ? ? 0.138 0.054 ? 9 1 0.987 ? ? 3.190 30.000 ? ? ? ? ? ? 2409 97.900 ? ? ? ? 0.095 ? ? ? ? ? ? ? ? 6.300 ? 0.876 ? ? 0.104 0.041 ? 10 1 0.986 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 106.030 _refine.B_iso_mean 25.4774 _refine.B_iso_min 8.740 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7KDR _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4880 _refine.ls_d_res_low 28.9710 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22492 _refine.ls_number_reflns_R_free 1000 _refine.ls_number_reflns_R_work 21492 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.1200 _refine.ls_percent_reflns_R_free 4.4500 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1641 _refine.ls_R_factor_R_free 0.2006 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1624 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.380 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7KDO _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.1300 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1100 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.4880 _refine_hist.d_res_low 28.9710 _refine_hist.number_atoms_solvent 268 _refine_hist.number_atoms_total 1640 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 158 _refine_hist.pdbx_B_iso_mean_ligand 30.36 _refine_hist.pdbx_B_iso_mean_solvent 40.62 _refine_hist.pdbx_number_atoms_protein 1267 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 105 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.4882 1.5667 . . 118 2526 79.0000 . . . 0.2662 0.0000 0.2301 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5667 1.6649 . . 144 3102 98.0000 . . . 0.2232 0.0000 0.2051 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6649 1.7934 . . 149 3189 99.0000 . . . 0.2353 0.0000 0.1783 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7934 1.9738 . . 144 3092 96.0000 . . . 0.2226 0.0000 0.1773 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9738 2.2593 . . 145 3125 98.0000 . . . 0.2181 0.0000 0.1584 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2593 2.8461 . . 150 3225 99.0000 . . . 0.1951 0.0000 0.1581 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8461 28.9710 . . 150 3233 98.0000 . . . 0.1783 0.0000 0.1490 . . . . . . . . . . . # _struct.entry_id 7KDR _struct.title 'Crystal structure of Escherichia coli HPPK in complex with bisubstrate inhibitor HP-75' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7KDR _struct_keywords.text 'alpha beta, TRANSFERASE, TRANSFERASE-INHIBITOR complex' _struct_keywords.pdbx_keywords TRANSFERASE/INHIBITOR # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 13 ? ASP A 27 ? SER A 13 ASP A 27 1 ? 15 HELX_P HELX_P2 AA2 ALA A 65 ? GLN A 80 ? ALA A 65 GLN A 80 1 ? 16 HELX_P HELX_P3 AA3 ASP A 117 ? ASN A 120 ? ASP A 117 ASN A 120 5 ? 4 HELX_P HELX_P4 AA4 ARG A 121 ? ALA A 132 ? ARG A 121 ALA A 132 1 ? 12 HELX_P HELX_P5 AA5 MET A 142 ? ALA A 151 ? MET A 142 ALA A 151 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 90 A . ? GLY 90 A PRO 91 A ? PRO 91 A 1 -1.03 2 VAL 113 A . ? VAL 113 A PRO 114 A ? PRO 114 A 1 -2.69 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 31 ? VAL A 36 ? SER A 31 VAL A 36 AA1 2 TYR A 53 ? THR A 62 ? TYR A 53 THR A 62 AA1 3 VAL A 2 ? SER A 9 ? VAL A 2 SER A 9 AA1 4 ASP A 95 ? PHE A 101 ? ASP A 95 PHE A 101 AA2 1 SER A 31 ? VAL A 36 ? SER A 31 VAL A 36 AA2 2 TYR A 53 ? THR A 62 ? TYR A 53 THR A 62 AA2 3 TYR A 40 ? THR A 42 ? TYR A 40 THR A 42 AA2 4 ASN A 156 ? LYS A 157 ? ASN A 156 LYS A 157 AA3 1 ILE A 106 ? ASN A 107 ? ILE A 106 ASN A 107 AA3 2 THR A 112 ? VAL A 113 ? THR A 112 VAL A 113 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 34 ? N LEU A 34 O ALA A 59 ? O ALA A 59 AA1 2 3 O LEU A 60 ? O LEU A 60 N ALA A 3 ? N ALA A 3 AA1 3 4 N GLY A 8 ? N GLY A 8 O ASP A 95 ? O ASP A 95 AA2 1 2 N LEU A 34 ? N LEU A 34 O ALA A 59 ? O ALA A 59 AA2 2 3 O TYR A 53 ? O TYR A 53 N THR A 42 ? N THR A 42 AA2 3 4 N ARG A 41 ? N ARG A 41 O ASN A 156 ? O ASN A 156 AA3 1 2 N ILE A 106 ? N ILE A 106 O VAL A 113 ? O VAL A 113 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A J1L 201 ? 28 'binding site for residue J1L A 201' AC2 Software A CL 202 ? 4 'binding site for residue CL A 202' AC3 Software A EDO 203 ? 7 'binding site for residue EDO A 203' AC4 Software A EDO 204 ? 6 'binding site for residue EDO A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 28 THR A 42 ? THR A 42 . ? 1_555 ? 2 AC1 28 PRO A 43 ? PRO A 43 . ? 1_555 ? 3 AC1 28 LEU A 45 ? LEU A 45 . ? 1_555 ? 4 AC1 28 GLN A 48 ? GLN A 48 . ? 4_546 ? 5 AC1 28 TYR A 53 ? TYR A 53 . ? 1_555 ? 6 AC1 28 ASN A 55 ? ASN A 55 . ? 1_555 ? 7 AC1 28 GLN A 74 ? GLN A 74 . ? 1_555 ? 8 AC1 28 TRP A 89 ? TRP A 89 . ? 1_555 ? 9 AC1 28 ARG A 92 ? ARG A 92 . ? 1_555 ? 10 AC1 28 ASP A 95 ? ASP A 95 . ? 1_555 ? 11 AC1 28 ASP A 97 ? ASP A 97 . ? 1_555 ? 12 AC1 28 ILE A 98 ? ILE A 98 . ? 1_555 ? 13 AC1 28 ARG A 110 ? ARG A 110 . ? 1_555 ? 14 AC1 28 LEU A 111 ? LEU A 111 . ? 1_555 ? 15 AC1 28 THR A 112 ? THR A 112 . ? 1_555 ? 16 AC1 28 HIS A 115 ? HIS A 115 . ? 1_555 ? 17 AC1 28 TYR A 116 ? TYR A 116 . ? 1_555 ? 18 AC1 28 ARG A 121 ? ARG A 121 . ? 1_555 ? 19 AC1 28 PHE A 123 ? PHE A 123 . ? 1_555 ? 20 AC1 28 EDO D . ? EDO A 203 . ? 4_546 ? 21 AC1 28 EDO E . ? EDO A 204 . ? 1_555 ? 22 AC1 28 HOH F . ? HOH A 327 . ? 1_555 ? 23 AC1 28 HOH F . ? HOH A 335 . ? 1_555 ? 24 AC1 28 HOH F . ? HOH A 360 . ? 1_555 ? 25 AC1 28 HOH F . ? HOH A 368 . ? 1_555 ? 26 AC1 28 HOH F . ? HOH A 388 . ? 1_555 ? 27 AC1 28 HOH F . ? HOH A 423 . ? 1_555 ? 28 AC1 28 HOH F . ? HOH A 440 . ? 3_545 ? 29 AC2 4 LYS A 119 ? LYS A 119 . ? 1_555 ? 30 AC2 4 PRO A 138 ? PRO A 138 . ? 1_555 ? 31 AC2 4 ASP A 139 ? ASP A 139 . ? 1_555 ? 32 AC2 4 HOH F . ? HOH A 529 . ? 1_555 ? 33 AC3 7 GLN A 48 ? GLN A 48 . ? 1_555 ? 34 AC3 7 ARG A 88 ? ARG A 88 . ? 4_556 ? 35 AC3 7 TYR A 116 ? TYR A 116 . ? 4_556 ? 36 AC3 7 J1L B . ? J1L A 201 . ? 4_556 ? 37 AC3 7 HOH F . ? HOH A 305 . ? 1_555 ? 38 AC3 7 HOH F . ? HOH A 313 . ? 1_555 ? 39 AC3 7 HOH F . ? HOH A 348 . ? 1_555 ? 40 AC4 6 ALA A 6 ? ALA A 6 . ? 1_555 ? 41 AC4 6 ASN A 55 ? ASN A 55 . ? 1_555 ? 42 AC4 6 ASP A 95 ? ASP A 95 . ? 1_555 ? 43 AC4 6 ASP A 97 ? ASP A 97 . ? 1_555 ? 44 AC4 6 J1L B . ? J1L A 201 . ? 1_555 ? 45 AC4 6 HOH F . ? HOH A 337 . ? 1_555 ? # _atom_sites.entry_id 7KDR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.016274 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003323 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023366 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018134 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 TRP 89 89 89 TRP TRP A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 MET 99 99 99 MET MET A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 MET 118 118 118 MET MET A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 PHE 123 123 123 PHE PHE A . n A 1 124 MET 124 124 124 MET MET A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 TRP 126 126 126 TRP TRP A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 MET 142 142 142 MET MET A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 TRP 158 158 158 TRP TRP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J1L 1 201 171 J1L J1L A . C 3 CL 1 202 201 CL CL A . D 4 EDO 1 203 301 EDO EDO A . E 4 EDO 1 204 302 EDO EDO A . F 5 HOH 1 301 128 HOH HOH A . F 5 HOH 2 302 261 HOH HOH A . F 5 HOH 3 303 214 HOH HOH A . F 5 HOH 4 304 260 HOH HOH A . F 5 HOH 5 305 126 HOH HOH A . F 5 HOH 6 306 25 HOH HOH A . F 5 HOH 7 307 117 HOH HOH A . F 5 HOH 8 308 72 HOH HOH A . F 5 HOH 9 309 184 HOH HOH A . F 5 HOH 10 310 42 HOH HOH A . F 5 HOH 11 311 189 HOH HOH A . F 5 HOH 12 312 227 HOH HOH A . F 5 HOH 13 313 188 HOH HOH A . F 5 HOH 14 314 16 HOH HOH A . F 5 HOH 15 315 183 HOH HOH A . F 5 HOH 16 316 169 HOH HOH A . F 5 HOH 17 317 266 HOH HOH A . F 5 HOH 18 318 180 HOH HOH A . F 5 HOH 19 319 232 HOH HOH A . F 5 HOH 20 320 15 HOH HOH A . F 5 HOH 21 321 60 HOH HOH A . F 5 HOH 22 322 106 HOH HOH A . F 5 HOH 23 323 140 HOH HOH A . F 5 HOH 24 324 145 HOH HOH A . F 5 HOH 25 325 138 HOH HOH A . F 5 HOH 26 326 30 HOH HOH A . F 5 HOH 27 327 115 HOH HOH A . F 5 HOH 28 328 192 HOH HOH A . F 5 HOH 29 329 63 HOH HOH A . F 5 HOH 30 330 94 HOH HOH A . F 5 HOH 31 331 208 HOH HOH A . F 5 HOH 32 332 164 HOH HOH A . F 5 HOH 33 333 134 HOH HOH A . F 5 HOH 34 334 108 HOH HOH A . F 5 HOH 35 335 173 HOH HOH A . F 5 HOH 36 336 141 HOH HOH A . F 5 HOH 37 337 27 HOH HOH A . F 5 HOH 38 338 62 HOH HOH A . F 5 HOH 39 339 230 HOH HOH A . F 5 HOH 40 340 118 HOH HOH A . F 5 HOH 41 341 137 HOH HOH A . F 5 HOH 42 342 47 HOH HOH A . F 5 HOH 43 343 34 HOH HOH A . F 5 HOH 44 344 3 HOH HOH A . F 5 HOH 45 345 19 HOH HOH A . F 5 HOH 46 346 194 HOH HOH A . F 5 HOH 47 347 143 HOH HOH A . F 5 HOH 48 348 185 HOH HOH A . F 5 HOH 49 349 84 HOH HOH A . F 5 HOH 50 350 9 HOH HOH A . F 5 HOH 51 351 238 HOH HOH A . F 5 HOH 52 352 59 HOH HOH A . F 5 HOH 53 353 112 HOH HOH A . F 5 HOH 54 354 13 HOH HOH A . F 5 HOH 55 355 33 HOH HOH A . F 5 HOH 56 356 177 HOH HOH A . F 5 HOH 57 357 37 HOH HOH A . F 5 HOH 58 358 101 HOH HOH A . F 5 HOH 59 359 222 HOH HOH A . F 5 HOH 60 360 18 HOH HOH A . F 5 HOH 61 361 11 HOH HOH A . F 5 HOH 62 362 149 HOH HOH A . F 5 HOH 63 363 197 HOH HOH A . F 5 HOH 64 364 68 HOH HOH A . F 5 HOH 65 365 56 HOH HOH A . F 5 HOH 66 366 205 HOH HOH A . F 5 HOH 67 367 158 HOH HOH A . F 5 HOH 68 368 178 HOH HOH A . F 5 HOH 69 369 17 HOH HOH A . F 5 HOH 70 370 77 HOH HOH A . F 5 HOH 71 371 1 HOH HOH A . F 5 HOH 72 372 61 HOH HOH A . F 5 HOH 73 373 124 HOH HOH A . F 5 HOH 74 374 144 HOH HOH A . F 5 HOH 75 375 218 HOH HOH A . F 5 HOH 76 376 240 HOH HOH A . F 5 HOH 77 377 148 HOH HOH A . F 5 HOH 78 378 133 HOH HOH A . F 5 HOH 79 379 69 HOH HOH A . F 5 HOH 80 380 31 HOH HOH A . F 5 HOH 81 381 21 HOH HOH A . F 5 HOH 82 382 73 HOH HOH A . F 5 HOH 83 383 195 HOH HOH A . F 5 HOH 84 384 10 HOH HOH A . F 5 HOH 85 385 136 HOH HOH A . F 5 HOH 86 386 212 HOH HOH A . F 5 HOH 87 387 221 HOH HOH A . F 5 HOH 88 388 12 HOH HOH A . F 5 HOH 89 389 182 HOH HOH A . F 5 HOH 90 390 130 HOH HOH A . F 5 HOH 91 391 139 HOH HOH A . F 5 HOH 92 392 36 HOH HOH A . F 5 HOH 93 393 75 HOH HOH A . F 5 HOH 94 394 4 HOH HOH A . F 5 HOH 95 395 41 HOH HOH A . F 5 HOH 96 396 216 HOH HOH A . F 5 HOH 97 397 154 HOH HOH A . F 5 HOH 98 398 153 HOH HOH A . F 5 HOH 99 399 206 HOH HOH A . F 5 HOH 100 400 39 HOH HOH A . F 5 HOH 101 401 217 HOH HOH A . F 5 HOH 102 402 54 HOH HOH A . F 5 HOH 103 403 241 HOH HOH A . F 5 HOH 104 404 198 HOH HOH A . F 5 HOH 105 405 167 HOH HOH A . F 5 HOH 106 406 155 HOH HOH A . F 5 HOH 107 407 103 HOH HOH A . F 5 HOH 108 408 46 HOH HOH A . F 5 HOH 109 409 85 HOH HOH A . F 5 HOH 110 410 239 HOH HOH A . F 5 HOH 111 411 225 HOH HOH A . F 5 HOH 112 412 98 HOH HOH A . F 5 HOH 113 413 160 HOH HOH A . F 5 HOH 114 414 91 HOH HOH A . F 5 HOH 115 415 162 HOH HOH A . F 5 HOH 116 416 142 HOH HOH A . F 5 HOH 117 417 49 HOH HOH A . F 5 HOH 118 418 67 HOH HOH A . F 5 HOH 119 419 53 HOH HOH A . F 5 HOH 120 420 119 HOH HOH A . F 5 HOH 121 421 23 HOH HOH A . F 5 HOH 122 422 82 HOH HOH A . F 5 HOH 123 423 50 HOH HOH A . F 5 HOH 124 424 168 HOH HOH A . F 5 HOH 125 425 71 HOH HOH A . F 5 HOH 126 426 190 HOH HOH A . F 5 HOH 127 427 48 HOH HOH A . F 5 HOH 128 428 78 HOH HOH A . F 5 HOH 129 429 211 HOH HOH A . F 5 HOH 130 430 7 HOH HOH A . F 5 HOH 131 431 129 HOH HOH A . F 5 HOH 132 432 170 HOH HOH A . F 5 HOH 133 433 127 HOH HOH A . F 5 HOH 134 434 2 HOH HOH A . F 5 HOH 135 435 14 HOH HOH A . F 5 HOH 136 436 196 HOH HOH A . F 5 HOH 137 437 209 HOH HOH A . F 5 HOH 138 438 201 HOH HOH A . F 5 HOH 139 439 228 HOH HOH A . F 5 HOH 140 440 89 HOH HOH A . F 5 HOH 141 441 38 HOH HOH A . F 5 HOH 142 442 132 HOH HOH A . F 5 HOH 143 443 64 HOH HOH A . F 5 HOH 144 444 107 HOH HOH A . F 5 HOH 145 445 220 HOH HOH A . F 5 HOH 146 446 44 HOH HOH A . F 5 HOH 147 447 86 HOH HOH A . F 5 HOH 148 448 102 HOH HOH A . F 5 HOH 149 449 95 HOH HOH A . F 5 HOH 150 450 152 HOH HOH A . F 5 HOH 151 451 55 HOH HOH A . F 5 HOH 152 452 109 HOH HOH A . F 5 HOH 153 453 122 HOH HOH A . F 5 HOH 154 454 215 HOH HOH A . F 5 HOH 155 455 254 HOH HOH A . F 5 HOH 156 456 6 HOH HOH A . F 5 HOH 157 457 125 HOH HOH A . F 5 HOH 158 458 35 HOH HOH A . F 5 HOH 159 459 229 HOH HOH A . F 5 HOH 160 460 22 HOH HOH A . F 5 HOH 161 461 248 HOH HOH A . F 5 HOH 162 462 26 HOH HOH A . F 5 HOH 163 463 150 HOH HOH A . F 5 HOH 164 464 193 HOH HOH A . F 5 HOH 165 465 104 HOH HOH A . F 5 HOH 166 466 51 HOH HOH A . F 5 HOH 167 467 253 HOH HOH A . F 5 HOH 168 468 116 HOH HOH A . F 5 HOH 169 469 66 HOH HOH A . F 5 HOH 170 470 74 HOH HOH A . F 5 HOH 171 471 256 HOH HOH A . F 5 HOH 172 472 203 HOH HOH A . F 5 HOH 173 473 245 HOH HOH A . F 5 HOH 174 474 237 HOH HOH A . F 5 HOH 175 475 28 HOH HOH A . F 5 HOH 176 476 249 HOH HOH A . F 5 HOH 177 477 79 HOH HOH A . F 5 HOH 178 478 247 HOH HOH A . F 5 HOH 179 479 146 HOH HOH A . F 5 HOH 180 480 8 HOH HOH A . F 5 HOH 181 481 45 HOH HOH A . F 5 HOH 182 482 242 HOH HOH A . F 5 HOH 183 483 165 HOH HOH A . F 5 HOH 184 484 111 HOH HOH A . F 5 HOH 185 485 207 HOH HOH A . F 5 HOH 186 486 90 HOH HOH A . F 5 HOH 187 487 88 HOH HOH A . F 5 HOH 188 488 135 HOH HOH A . F 5 HOH 189 489 5 HOH HOH A . F 5 HOH 190 490 100 HOH HOH A . F 5 HOH 191 491 172 HOH HOH A . F 5 HOH 192 492 24 HOH HOH A . F 5 HOH 193 493 234 HOH HOH A . F 5 HOH 194 494 250 HOH HOH A . F 5 HOH 195 495 175 HOH HOH A . F 5 HOH 196 496 219 HOH HOH A . F 5 HOH 197 497 246 HOH HOH A . F 5 HOH 198 498 224 HOH HOH A . F 5 HOH 199 499 81 HOH HOH A . F 5 HOH 200 500 110 HOH HOH A . F 5 HOH 201 501 236 HOH HOH A . F 5 HOH 202 502 156 HOH HOH A . F 5 HOH 203 503 262 HOH HOH A . F 5 HOH 204 504 123 HOH HOH A . F 5 HOH 205 505 265 HOH HOH A . F 5 HOH 206 506 186 HOH HOH A . F 5 HOH 207 507 235 HOH HOH A . F 5 HOH 208 508 157 HOH HOH A . F 5 HOH 209 509 199 HOH HOH A . F 5 HOH 210 510 43 HOH HOH A . F 5 HOH 211 511 269 HOH HOH A . F 5 HOH 212 512 57 HOH HOH A . F 5 HOH 213 513 191 HOH HOH A . F 5 HOH 214 514 174 HOH HOH A . F 5 HOH 215 515 96 HOH HOH A . F 5 HOH 216 516 105 HOH HOH A . F 5 HOH 217 517 213 HOH HOH A . F 5 HOH 218 518 163 HOH HOH A . F 5 HOH 219 519 120 HOH HOH A . F 5 HOH 220 520 147 HOH HOH A . F 5 HOH 221 521 226 HOH HOH A . F 5 HOH 222 522 181 HOH HOH A . F 5 HOH 223 523 268 HOH HOH A . F 5 HOH 224 524 264 HOH HOH A . F 5 HOH 225 525 93 HOH HOH A . F 5 HOH 226 526 263 HOH HOH A . F 5 HOH 227 527 58 HOH HOH A . F 5 HOH 228 528 161 HOH HOH A . F 5 HOH 229 529 76 HOH HOH A . F 5 HOH 230 530 114 HOH HOH A . F 5 HOH 231 531 166 HOH HOH A . F 5 HOH 232 532 87 HOH HOH A . F 5 HOH 233 533 99 HOH HOH A . F 5 HOH 234 534 29 HOH HOH A . F 5 HOH 235 535 259 HOH HOH A . F 5 HOH 236 536 252 HOH HOH A . F 5 HOH 237 537 80 HOH HOH A . F 5 HOH 238 538 233 HOH HOH A . F 5 HOH 239 539 52 HOH HOH A . F 5 HOH 240 540 271 HOH HOH A . F 5 HOH 241 541 113 HOH HOH A . F 5 HOH 242 542 151 HOH HOH A . F 5 HOH 243 543 70 HOH HOH A . F 5 HOH 244 544 92 HOH HOH A . F 5 HOH 245 545 231 HOH HOH A . F 5 HOH 246 546 267 HOH HOH A . F 5 HOH 247 547 179 HOH HOH A . F 5 HOH 248 548 65 HOH HOH A . F 5 HOH 249 549 200 HOH HOH A . F 5 HOH 250 550 251 HOH HOH A . F 5 HOH 251 551 187 HOH HOH A . F 5 HOH 252 552 32 HOH HOH A . F 5 HOH 253 553 257 HOH HOH A . F 5 HOH 254 554 202 HOH HOH A . F 5 HOH 255 555 258 HOH HOH A . F 5 HOH 256 556 223 HOH HOH A . F 5 HOH 257 557 270 HOH HOH A . F 5 HOH 258 558 244 HOH HOH A . F 5 HOH 259 559 243 HOH HOH A . F 5 HOH 260 560 204 HOH HOH A . F 5 HOH 261 561 210 HOH HOH A . F 5 HOH 262 562 255 HOH HOH A . F 5 HOH 263 563 159 HOH HOH A . F 5 HOH 264 564 20 HOH HOH A . F 5 HOH 265 565 83 HOH HOH A . F 5 HOH 266 566 97 HOH HOH A . F 5 HOH 267 567 171 HOH HOH A . F 5 HOH 268 568 121 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 303 ? F HOH . 2 1 A HOH 454 ? F HOH . 3 1 A HOH 557 ? F HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-12-02 2 'Structure model' 1 1 2021-02-03 3 'Structure model' 1 2 2023-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.year' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.16 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_entry_details.entry_id 7KDR _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 13 ? ? 71.92 83.20 2 1 ASP A 49 ? B -92.53 55.45 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 567 ? 6.08 . 2 1 O ? A HOH 568 ? 6.37 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 EDO C1 C N N 75 EDO O1 O N N 76 EDO C2 C N N 77 EDO O2 O N N 78 EDO H11 H N N 79 EDO H12 H N N 80 EDO HO1 H N N 81 EDO H21 H N N 82 EDO H22 H N N 83 EDO HO2 H N N 84 GLN N N N N 85 GLN CA C N S 86 GLN C C N N 87 GLN O O N N 88 GLN CB C N N 89 GLN CG C N N 90 GLN CD C N N 91 GLN OE1 O N N 92 GLN NE2 N N N 93 GLN OXT O N N 94 GLN H H N N 95 GLN H2 H N N 96 GLN HA H N N 97 GLN HB2 H N N 98 GLN HB3 H N N 99 GLN HG2 H N N 100 GLN HG3 H N N 101 GLN HE21 H N N 102 GLN HE22 H N N 103 GLN HXT H N N 104 GLU N N N N 105 GLU CA C N S 106 GLU C C N N 107 GLU O O N N 108 GLU CB C N N 109 GLU CG C N N 110 GLU CD C N N 111 GLU OE1 O N N 112 GLU OE2 O N N 113 GLU OXT O N N 114 GLU H H N N 115 GLU H2 H N N 116 GLU HA H N N 117 GLU HB2 H N N 118 GLU HB3 H N N 119 GLU HG2 H N N 120 GLU HG3 H N N 121 GLU HE2 H N N 122 GLU HXT H N N 123 GLY N N N N 124 GLY CA C N N 125 GLY C C N N 126 GLY O O N N 127 GLY OXT O N N 128 GLY H H N N 129 GLY H2 H N N 130 GLY HA2 H N N 131 GLY HA3 H N N 132 GLY HXT H N N 133 HIS N N N N 134 HIS CA C N S 135 HIS C C N N 136 HIS O O N N 137 HIS CB C N N 138 HIS CG C Y N 139 HIS ND1 N Y N 140 HIS CD2 C Y N 141 HIS CE1 C Y N 142 HIS NE2 N Y N 143 HIS OXT O N N 144 HIS H H N N 145 HIS H2 H N N 146 HIS HA H N N 147 HIS HB2 H N N 148 HIS HB3 H N N 149 HIS HD1 H N N 150 HIS HD2 H N N 151 HIS HE1 H N N 152 HIS HE2 H N N 153 HIS HXT H N N 154 HOH O O N N 155 HOH H1 H N N 156 HOH H2 H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 J1L C01 C N N 180 J1L C1 C N S 181 J1L C10 C N N 182 J1L C11 C N R 183 J1L C12 C N N 184 J1L C13 C N R 185 J1L C14 C N N 186 J1L C15 C N N 187 J1L C16 C N N 188 J1L C18 C N N 189 J1L C19 C N N 190 J1L C2 C N S 191 J1L C20 C N N 192 J1L C21 C N N 193 J1L C22 C N N 194 J1L C23 C N N 195 J1L C24 C N N 196 J1L C25 C N N 197 J1L C26 C N N 198 J1L C27 C N N 199 J1L C3 C N R 200 J1L C4 C N R 201 J1L C5 C Y N 202 J1L C6 C Y N 203 J1L C7 C Y N 204 J1L C8 C Y N 205 J1L C9 C Y N 206 J1L N1 N Y N 207 J1L N10 N N N 208 J1L N11 N N N 209 J1L N12 N N N 210 J1L N2 N Y N 211 J1L N28 N N N 212 J1L N3 N N N 213 J1L N4 N Y N 214 J1L N5 N Y N 215 J1L N6 N N N 216 J1L N8 N N N 217 J1L N9 N N N 218 J1L O01 O N N 219 J1L O02 O N N 220 J1L O03 O N N 221 J1L O04 O N N 222 J1L O1 O N N 223 J1L O2 O N N 224 J1L O3 O N N 225 J1L O4 O N N 226 J1L O5 O N N 227 J1L S1 S N N 228 J1L H1 H N N 229 J1L H10 H N N 230 J1L H10A H N N 231 J1L H11 H N N 232 J1L H12A H N N 233 J1L H12 H N N 234 J1L H02 H N N 235 J1L H14 H N N 236 J1L H14A H N N 237 J1L H15A H N N 238 J1L H15 H N N 239 J1L H16A H N N 240 J1L H16 H N N 241 J1L H2 H N N 242 J1L H23B H N N 243 J1L H23A H N N 244 J1L H23 H N N 245 J1L H24B H N N 246 J1L H24 H N N 247 J1L H24A H N N 248 J1L H27 H N N 249 J1L H27A H N N 250 J1L H3 H N N 251 J1L H4 H N N 252 J1L H5 H N N 253 J1L H8 H N N 254 J1L HN10 H N N 255 J1L HN12 H N N 256 J1L HN28 H N N 257 J1L HN3 H N N 258 J1L HN3A H N N 259 J1L HN9 H N N 260 J1L HN9A H N N 261 J1L H7 H N N 262 J1L HO2 H N N 263 J1L HO3 H N N 264 LEU N N N N 265 LEU CA C N S 266 LEU C C N N 267 LEU O O N N 268 LEU CB C N N 269 LEU CG C N N 270 LEU CD1 C N N 271 LEU CD2 C N N 272 LEU OXT O N N 273 LEU H H N N 274 LEU H2 H N N 275 LEU HA H N N 276 LEU HB2 H N N 277 LEU HB3 H N N 278 LEU HG H N N 279 LEU HD11 H N N 280 LEU HD12 H N N 281 LEU HD13 H N N 282 LEU HD21 H N N 283 LEU HD22 H N N 284 LEU HD23 H N N 285 LEU HXT H N N 286 LYS N N N N 287 LYS CA C N S 288 LYS C C N N 289 LYS O O N N 290 LYS CB C N N 291 LYS CG C N N 292 LYS CD C N N 293 LYS CE C N N 294 LYS NZ N N N 295 LYS OXT O N N 296 LYS H H N N 297 LYS H2 H N N 298 LYS HA H N N 299 LYS HB2 H N N 300 LYS HB3 H N N 301 LYS HG2 H N N 302 LYS HG3 H N N 303 LYS HD2 H N N 304 LYS HD3 H N N 305 LYS HE2 H N N 306 LYS HE3 H N N 307 LYS HZ1 H N N 308 LYS HZ2 H N N 309 LYS HZ3 H N N 310 LYS HXT H N N 311 MET N N N N 312 MET CA C N S 313 MET C C N N 314 MET O O N N 315 MET CB C N N 316 MET CG C N N 317 MET SD S N N 318 MET CE C N N 319 MET OXT O N N 320 MET H H N N 321 MET H2 H N N 322 MET HA H N N 323 MET HB2 H N N 324 MET HB3 H N N 325 MET HG2 H N N 326 MET HG3 H N N 327 MET HE1 H N N 328 MET HE2 H N N 329 MET HE3 H N N 330 MET HXT H N N 331 PHE N N N N 332 PHE CA C N S 333 PHE C C N N 334 PHE O O N N 335 PHE CB C N N 336 PHE CG C Y N 337 PHE CD1 C Y N 338 PHE CD2 C Y N 339 PHE CE1 C Y N 340 PHE CE2 C Y N 341 PHE CZ C Y N 342 PHE OXT O N N 343 PHE H H N N 344 PHE H2 H N N 345 PHE HA H N N 346 PHE HB2 H N N 347 PHE HB3 H N N 348 PHE HD1 H N N 349 PHE HD2 H N N 350 PHE HE1 H N N 351 PHE HE2 H N N 352 PHE HZ H N N 353 PHE HXT H N N 354 PRO N N N N 355 PRO CA C N S 356 PRO C C N N 357 PRO O O N N 358 PRO CB C N N 359 PRO CG C N N 360 PRO CD C N N 361 PRO OXT O N N 362 PRO H H N N 363 PRO HA H N N 364 PRO HB2 H N N 365 PRO HB3 H N N 366 PRO HG2 H N N 367 PRO HG3 H N N 368 PRO HD2 H N N 369 PRO HD3 H N N 370 PRO HXT H N N 371 SER N N N N 372 SER CA C N S 373 SER C C N N 374 SER O O N N 375 SER CB C N N 376 SER OG O N N 377 SER OXT O N N 378 SER H H N N 379 SER H2 H N N 380 SER HA H N N 381 SER HB2 H N N 382 SER HB3 H N N 383 SER HG H N N 384 SER HXT H N N 385 THR N N N N 386 THR CA C N S 387 THR C C N N 388 THR O O N N 389 THR CB C N R 390 THR OG1 O N N 391 THR CG2 C N N 392 THR OXT O N N 393 THR H H N N 394 THR H2 H N N 395 THR HA H N N 396 THR HB H N N 397 THR HG1 H N N 398 THR HG21 H N N 399 THR HG22 H N N 400 THR HG23 H N N 401 THR HXT H N N 402 TRP N N N N 403 TRP CA C N S 404 TRP C C N N 405 TRP O O N N 406 TRP CB C N N 407 TRP CG C Y N 408 TRP CD1 C Y N 409 TRP CD2 C Y N 410 TRP NE1 N Y N 411 TRP CE2 C Y N 412 TRP CE3 C Y N 413 TRP CZ2 C Y N 414 TRP CZ3 C Y N 415 TRP CH2 C Y N 416 TRP OXT O N N 417 TRP H H N N 418 TRP H2 H N N 419 TRP HA H N N 420 TRP HB2 H N N 421 TRP HB3 H N N 422 TRP HD1 H N N 423 TRP HE1 H N N 424 TRP HE3 H N N 425 TRP HZ2 H N N 426 TRP HZ3 H N N 427 TRP HH2 H N N 428 TRP HXT H N N 429 TYR N N N N 430 TYR CA C N S 431 TYR C C N N 432 TYR O O N N 433 TYR CB C N N 434 TYR CG C Y N 435 TYR CD1 C Y N 436 TYR CD2 C Y N 437 TYR CE1 C Y N 438 TYR CE2 C Y N 439 TYR CZ C Y N 440 TYR OH O N N 441 TYR OXT O N N 442 TYR H H N N 443 TYR H2 H N N 444 TYR HA H N N 445 TYR HB2 H N N 446 TYR HB3 H N N 447 TYR HD1 H N N 448 TYR HD2 H N N 449 TYR HE1 H N N 450 TYR HE2 H N N 451 TYR HH H N N 452 TYR HXT H N N 453 VAL N N N N 454 VAL CA C N S 455 VAL C C N N 456 VAL O O N N 457 VAL CB C N N 458 VAL CG1 C N N 459 VAL CG2 C N N 460 VAL OXT O N N 461 VAL H H N N 462 VAL H2 H N N 463 VAL HA H N N 464 VAL HB H N N 465 VAL HG11 H N N 466 VAL HG12 H N N 467 VAL HG13 H N N 468 VAL HG21 H N N 469 VAL HG22 H N N 470 VAL HG23 H N N 471 VAL HXT H N N 472 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 EDO C1 O1 sing N N 70 EDO C1 C2 sing N N 71 EDO C1 H11 sing N N 72 EDO C1 H12 sing N N 73 EDO O1 HO1 sing N N 74 EDO C2 O2 sing N N 75 EDO C2 H21 sing N N 76 EDO C2 H22 sing N N 77 EDO O2 HO2 sing N N 78 GLN N CA sing N N 79 GLN N H sing N N 80 GLN N H2 sing N N 81 GLN CA C sing N N 82 GLN CA CB sing N N 83 GLN CA HA sing N N 84 GLN C O doub N N 85 GLN C OXT sing N N 86 GLN CB CG sing N N 87 GLN CB HB2 sing N N 88 GLN CB HB3 sing N N 89 GLN CG CD sing N N 90 GLN CG HG2 sing N N 91 GLN CG HG3 sing N N 92 GLN CD OE1 doub N N 93 GLN CD NE2 sing N N 94 GLN NE2 HE21 sing N N 95 GLN NE2 HE22 sing N N 96 GLN OXT HXT sing N N 97 GLU N CA sing N N 98 GLU N H sing N N 99 GLU N H2 sing N N 100 GLU CA C sing N N 101 GLU CA CB sing N N 102 GLU CA HA sing N N 103 GLU C O doub N N 104 GLU C OXT sing N N 105 GLU CB CG sing N N 106 GLU CB HB2 sing N N 107 GLU CB HB3 sing N N 108 GLU CG CD sing N N 109 GLU CG HG2 sing N N 110 GLU CG HG3 sing N N 111 GLU CD OE1 doub N N 112 GLU CD OE2 sing N N 113 GLU OE2 HE2 sing N N 114 GLU OXT HXT sing N N 115 GLY N CA sing N N 116 GLY N H sing N N 117 GLY N H2 sing N N 118 GLY CA C sing N N 119 GLY CA HA2 sing N N 120 GLY CA HA3 sing N N 121 GLY C O doub N N 122 GLY C OXT sing N N 123 GLY OXT HXT sing N N 124 HIS N CA sing N N 125 HIS N H sing N N 126 HIS N H2 sing N N 127 HIS CA C sing N N 128 HIS CA CB sing N N 129 HIS CA HA sing N N 130 HIS C O doub N N 131 HIS C OXT sing N N 132 HIS CB CG sing N N 133 HIS CB HB2 sing N N 134 HIS CB HB3 sing N N 135 HIS CG ND1 sing Y N 136 HIS CG CD2 doub Y N 137 HIS ND1 CE1 doub Y N 138 HIS ND1 HD1 sing N N 139 HIS CD2 NE2 sing Y N 140 HIS CD2 HD2 sing N N 141 HIS CE1 NE2 sing Y N 142 HIS CE1 HE1 sing N N 143 HIS NE2 HE2 sing N N 144 HIS OXT HXT sing N N 145 HOH O H1 sing N N 146 HOH O H2 sing N N 147 ILE N CA sing N N 148 ILE N H sing N N 149 ILE N H2 sing N N 150 ILE CA C sing N N 151 ILE CA CB sing N N 152 ILE CA HA sing N N 153 ILE C O doub N N 154 ILE C OXT sing N N 155 ILE CB CG1 sing N N 156 ILE CB CG2 sing N N 157 ILE CB HB sing N N 158 ILE CG1 CD1 sing N N 159 ILE CG1 HG12 sing N N 160 ILE CG1 HG13 sing N N 161 ILE CG2 HG21 sing N N 162 ILE CG2 HG22 sing N N 163 ILE CG2 HG23 sing N N 164 ILE CD1 HD11 sing N N 165 ILE CD1 HD12 sing N N 166 ILE CD1 HD13 sing N N 167 ILE OXT HXT sing N N 168 J1L N4 C8 sing Y N 169 J1L N4 C7 doub Y N 170 J1L C8 N5 doub Y N 171 J1L N3 C7 sing N N 172 J1L C7 C6 sing Y N 173 J1L N5 C9 sing Y N 174 J1L C6 C9 doub Y N 175 J1L C6 N2 sing Y N 176 J1L C9 N1 sing Y N 177 J1L N2 C5 doub Y N 178 J1L O3 C3 sing N N 179 J1L C3 C4 sing N N 180 J1L C3 C2 sing N N 181 J1L N1 C5 sing Y N 182 J1L N1 C4 sing N N 183 J1L O5 C20 doub N N 184 J1L C4 O1 sing N N 185 J1L C15 C14 sing N N 186 J1L C15 C11 sing N N 187 J1L C2 O2 sing N N 188 J1L C2 C1 sing N N 189 J1L C14 N6 sing N N 190 J1L C20 N10 sing N N 191 J1L C20 C26 sing N N 192 J1L N10 C19 sing N N 193 J1L O1 C1 sing N N 194 J1L C10 C1 sing N N 195 J1L C10 S1 sing N N 196 J1L N6 C16 sing N N 197 J1L N6 C13 sing N N 198 J1L C11 S1 sing N N 199 J1L C11 C12 sing N N 200 J1L C16 C27 sing N N 201 J1L C27 N28 sing N N 202 J1L N28 C18 sing N N 203 J1L N9 C19 sing N N 204 J1L C19 N8 doub N N 205 J1L C26 N11 sing N N 206 J1L C26 C25 doub N N 207 J1L N11 C21 doub N N 208 J1L S1 O02 doub N N 209 J1L S1 O04 doub N N 210 J1L C12 C13 sing N N 211 J1L C13 C01 sing N N 212 J1L O01 C01 doub N N 213 J1L C18 C21 sing N N 214 J1L C18 O4 doub N N 215 J1L C25 N8 sing N N 216 J1L C25 N12 sing N N 217 J1L C21 C22 sing N N 218 J1L C01 O03 sing N N 219 J1L N12 C22 sing N N 220 J1L C22 C23 sing N N 221 J1L C22 C24 sing N N 222 J1L C1 H1 sing N N 223 J1L C10 H10 sing N N 224 J1L C10 H10A sing N N 225 J1L C11 H11 sing N N 226 J1L C12 H12A sing N N 227 J1L C12 H12 sing N N 228 J1L C13 H02 sing N N 229 J1L C14 H14 sing N N 230 J1L C14 H14A sing N N 231 J1L C15 H15A sing N N 232 J1L C15 H15 sing N N 233 J1L C16 H16A sing N N 234 J1L C16 H16 sing N N 235 J1L C2 H2 sing N N 236 J1L C23 H23B sing N N 237 J1L C23 H23A sing N N 238 J1L C23 H23 sing N N 239 J1L C24 H24B sing N N 240 J1L C24 H24 sing N N 241 J1L C24 H24A sing N N 242 J1L C27 H27 sing N N 243 J1L C27 H27A sing N N 244 J1L C3 H3 sing N N 245 J1L C4 H4 sing N N 246 J1L C5 H5 sing N N 247 J1L C8 H8 sing N N 248 J1L N10 HN10 sing N N 249 J1L N12 HN12 sing N N 250 J1L N28 HN28 sing N N 251 J1L N3 HN3 sing N N 252 J1L N3 HN3A sing N N 253 J1L N9 HN9 sing N N 254 J1L N9 HN9A sing N N 255 J1L O03 H7 sing N N 256 J1L O2 HO2 sing N N 257 J1L O3 HO3 sing N N 258 LEU N CA sing N N 259 LEU N H sing N N 260 LEU N H2 sing N N 261 LEU CA C sing N N 262 LEU CA CB sing N N 263 LEU CA HA sing N N 264 LEU C O doub N N 265 LEU C OXT sing N N 266 LEU CB CG sing N N 267 LEU CB HB2 sing N N 268 LEU CB HB3 sing N N 269 LEU CG CD1 sing N N 270 LEU CG CD2 sing N N 271 LEU CG HG sing N N 272 LEU CD1 HD11 sing N N 273 LEU CD1 HD12 sing N N 274 LEU CD1 HD13 sing N N 275 LEU CD2 HD21 sing N N 276 LEU CD2 HD22 sing N N 277 LEU CD2 HD23 sing N N 278 LEU OXT HXT sing N N 279 LYS N CA sing N N 280 LYS N H sing N N 281 LYS N H2 sing N N 282 LYS CA C sing N N 283 LYS CA CB sing N N 284 LYS CA HA sing N N 285 LYS C O doub N N 286 LYS C OXT sing N N 287 LYS CB CG sing N N 288 LYS CB HB2 sing N N 289 LYS CB HB3 sing N N 290 LYS CG CD sing N N 291 LYS CG HG2 sing N N 292 LYS CG HG3 sing N N 293 LYS CD CE sing N N 294 LYS CD HD2 sing N N 295 LYS CD HD3 sing N N 296 LYS CE NZ sing N N 297 LYS CE HE2 sing N N 298 LYS CE HE3 sing N N 299 LYS NZ HZ1 sing N N 300 LYS NZ HZ2 sing N N 301 LYS NZ HZ3 sing N N 302 LYS OXT HXT sing N N 303 MET N CA sing N N 304 MET N H sing N N 305 MET N H2 sing N N 306 MET CA C sing N N 307 MET CA CB sing N N 308 MET CA HA sing N N 309 MET C O doub N N 310 MET C OXT sing N N 311 MET CB CG sing N N 312 MET CB HB2 sing N N 313 MET CB HB3 sing N N 314 MET CG SD sing N N 315 MET CG HG2 sing N N 316 MET CG HG3 sing N N 317 MET SD CE sing N N 318 MET CE HE1 sing N N 319 MET CE HE2 sing N N 320 MET CE HE3 sing N N 321 MET OXT HXT sing N N 322 PHE N CA sing N N 323 PHE N H sing N N 324 PHE N H2 sing N N 325 PHE CA C sing N N 326 PHE CA CB sing N N 327 PHE CA HA sing N N 328 PHE C O doub N N 329 PHE C OXT sing N N 330 PHE CB CG sing N N 331 PHE CB HB2 sing N N 332 PHE CB HB3 sing N N 333 PHE CG CD1 doub Y N 334 PHE CG CD2 sing Y N 335 PHE CD1 CE1 sing Y N 336 PHE CD1 HD1 sing N N 337 PHE CD2 CE2 doub Y N 338 PHE CD2 HD2 sing N N 339 PHE CE1 CZ doub Y N 340 PHE CE1 HE1 sing N N 341 PHE CE2 CZ sing Y N 342 PHE CE2 HE2 sing N N 343 PHE CZ HZ sing N N 344 PHE OXT HXT sing N N 345 PRO N CA sing N N 346 PRO N CD sing N N 347 PRO N H sing N N 348 PRO CA C sing N N 349 PRO CA CB sing N N 350 PRO CA HA sing N N 351 PRO C O doub N N 352 PRO C OXT sing N N 353 PRO CB CG sing N N 354 PRO CB HB2 sing N N 355 PRO CB HB3 sing N N 356 PRO CG CD sing N N 357 PRO CG HG2 sing N N 358 PRO CG HG3 sing N N 359 PRO CD HD2 sing N N 360 PRO CD HD3 sing N N 361 PRO OXT HXT sing N N 362 SER N CA sing N N 363 SER N H sing N N 364 SER N H2 sing N N 365 SER CA C sing N N 366 SER CA CB sing N N 367 SER CA HA sing N N 368 SER C O doub N N 369 SER C OXT sing N N 370 SER CB OG sing N N 371 SER CB HB2 sing N N 372 SER CB HB3 sing N N 373 SER OG HG sing N N 374 SER OXT HXT sing N N 375 THR N CA sing N N 376 THR N H sing N N 377 THR N H2 sing N N 378 THR CA C sing N N 379 THR CA CB sing N N 380 THR CA HA sing N N 381 THR C O doub N N 382 THR C OXT sing N N 383 THR CB OG1 sing N N 384 THR CB CG2 sing N N 385 THR CB HB sing N N 386 THR OG1 HG1 sing N N 387 THR CG2 HG21 sing N N 388 THR CG2 HG22 sing N N 389 THR CG2 HG23 sing N N 390 THR OXT HXT sing N N 391 TRP N CA sing N N 392 TRP N H sing N N 393 TRP N H2 sing N N 394 TRP CA C sing N N 395 TRP CA CB sing N N 396 TRP CA HA sing N N 397 TRP C O doub N N 398 TRP C OXT sing N N 399 TRP CB CG sing N N 400 TRP CB HB2 sing N N 401 TRP CB HB3 sing N N 402 TRP CG CD1 doub Y N 403 TRP CG CD2 sing Y N 404 TRP CD1 NE1 sing Y N 405 TRP CD1 HD1 sing N N 406 TRP CD2 CE2 doub Y N 407 TRP CD2 CE3 sing Y N 408 TRP NE1 CE2 sing Y N 409 TRP NE1 HE1 sing N N 410 TRP CE2 CZ2 sing Y N 411 TRP CE3 CZ3 doub Y N 412 TRP CE3 HE3 sing N N 413 TRP CZ2 CH2 doub Y N 414 TRP CZ2 HZ2 sing N N 415 TRP CZ3 CH2 sing Y N 416 TRP CZ3 HZ3 sing N N 417 TRP CH2 HH2 sing N N 418 TRP OXT HXT sing N N 419 TYR N CA sing N N 420 TYR N H sing N N 421 TYR N H2 sing N N 422 TYR CA C sing N N 423 TYR CA CB sing N N 424 TYR CA HA sing N N 425 TYR C O doub N N 426 TYR C OXT sing N N 427 TYR CB CG sing N N 428 TYR CB HB2 sing N N 429 TYR CB HB3 sing N N 430 TYR CG CD1 doub Y N 431 TYR CG CD2 sing Y N 432 TYR CD1 CE1 sing Y N 433 TYR CD1 HD1 sing N N 434 TYR CD2 CE2 doub Y N 435 TYR CD2 HD2 sing N N 436 TYR CE1 CZ doub Y N 437 TYR CE1 HE1 sing N N 438 TYR CE2 CZ sing Y N 439 TYR CE2 HE2 sing N N 440 TYR CZ OH sing N N 441 TYR OH HH sing N N 442 TYR OXT HXT sing N N 443 VAL N CA sing N N 444 VAL N H sing N N 445 VAL N H2 sing N N 446 VAL CA C sing N N 447 VAL CA CB sing N N 448 VAL CA HA sing N N 449 VAL C O doub N N 450 VAL C OXT sing N N 451 VAL CB CG1 sing N N 452 VAL CB CG2 sing N N 453 VAL CB HB sing N N 454 VAL CG1 HG11 sing N N 455 VAL CG1 HG12 sing N N 456 VAL CG1 HG13 sing N N 457 VAL CG2 HG21 sing N N 458 VAL CG2 HG22 sing N N 459 VAL CG2 HG23 sing N N 460 VAL OXT HXT sing N N 461 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id J1L _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id J1L _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;5'-{[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]sulfonyl}-5'-deoxyadenosine ; J1L 3 'CHLORIDE ION' CL 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7KDO _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #