HEADER VIRAL PROTEIN 22-OCT-20 7KHU TITLE CRYSTAL STRUCTURE OF THE CARBOHYDRATE-BINDING DOMAIN VP8* OF HUMAN TITLE 2 P[4] ROTAVIRUS STRAIN BM5265 IN COMPLEX WITH LNDFH I COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER CAPSID PROTEIN VP4; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: VP4 HAEMAGGLUT DOMAIN, RESIDUES 15-174; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ROTAVIRUS A; SOURCE 3 ORGANISM_TAXID: 10941; SOURCE 4 GENE: VP4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ROTAVIRUS, HOST RECEPTOR INTERACTION, VIRUS, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.XU,M.STUCKERT,R.BURNSIDE,K.MCGINNIS,X.JIANG,M.A.KENNEDY REVDAT 3 18-OCT-23 7KHU 1 REMARK REVDAT 2 22-SEP-21 7KHU 1 JRNL REVDAT 1 18-AUG-21 7KHU 0 JRNL AUTH S.XU,K.R.MCGINNIS,Y.LIU,P.HUANG,M.TAN,M.R.STUCKERT, JRNL AUTH 2 R.E.BURNSIDE,E.G.JACOB,S.NI,X.JIANG,M.A.KENNEDY JRNL TITL STRUCTURAL BASIS OF P[II] ROTAVIRUS EVOLUTION AND HOST JRNL TITL 2 RANGES UNDER SELECTION OF HISTO-BLOOD GROUP ANTIGENS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 34475219 JRNL DOI 10.1073/PNAS.2107963118 REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 8970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 482 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.54 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.61 REMARK 3 REFLECTION IN BIN (WORKING SET) : 662 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.4600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2567 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 136 REMARK 3 SOLVENT ATOMS : 45 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.35000 REMARK 3 B22 (A**2) : 1.68000 REMARK 3 B33 (A**2) : -2.65000 REMARK 3 B12 (A**2) : 2.41000 REMARK 3 B13 (A**2) : 0.52000 REMARK 3 B23 (A**2) : 0.78000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.375 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.340 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.569 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.877 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2781 ; 0.009 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 2427 ; 0.001 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3800 ; 1.689 ; 1.722 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5618 ; 1.224 ; 1.677 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 315 ; 8.260 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;35.749 ;23.418 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 417 ;16.477 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;14.810 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 401 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3091 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 685 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 158 B 2 158 4954 0.120 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7KHU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1000252502. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97932 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9452 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.540 REMARK 200 RESOLUTION RANGE LOW (A) : 53.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.19500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.45500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6UT9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 ACETATE TRIHYDRATE PH 4.6, 25% W/V POLYETHYLENE GLYCOL 4,000, PH REMARK 280 7.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 LEU A 160 REMARK 465 LEU B 160 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 NAG E 3 O5 GAL E 4 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 36 -78.97 -114.67 REMARK 500 ASN A 90 95.53 -69.05 REMARK 500 SER A 147 -30.82 -39.87 REMARK 500 PHE B 11 -60.09 -109.51 REMARK 500 LYS B 12 83.97 70.60 REMARK 500 SER B 36 -77.76 -111.83 REMARK 500 GLN B 51 115.81 -28.23 REMARK 500 ASN B 90 94.19 -69.33 REMARK 500 REMARK 500 REMARK: NULL DBREF 7KHU A 1 160 UNP E9BVI9 E9BVI9_9REOV 15 174 DBREF 7KHU B 1 160 UNP E9BVI9 E9BVI9_9REOV 15 174 SEQADV 7KHU ASN A 70 UNP E9BVI9 SER 84 CONFLICT SEQADV 7KHU GLY A 84 UNP E9BVI9 SER 98 CONFLICT SEQADV 7KHU ASN B 70 UNP E9BVI9 SER 84 CONFLICT SEQADV 7KHU GLY B 84 UNP E9BVI9 SER 98 CONFLICT SEQRES 1 A 160 VAL LEU ASP GLY PRO TYR GLN PRO THR THR PHE LYS PRO SEQRES 2 A 160 PRO ASN ASP TYR TRP LEU LEU ILE SER SER ASN THR ASP SEQRES 3 A 160 GLY VAL VAL TYR GLU SER THR ASN ASN SER ASP PHE TRP SEQRES 4 A 160 THR ALA VAL ILE ALA VAL GLU PRO HIS VAL SER GLN THR SEQRES 5 A 160 ASN ARG GLN TYR VAL LEU PHE GLY GLU ASN LYS GLN PHE SEQRES 6 A 160 ASN VAL GLU ASN ASN SER ASP LYS TRP LYS PHE PHE GLU SEQRES 7 A 160 MET PHE LYS GLY SER GLY GLN SER ASP PHE SER ASN ARG SEQRES 8 A 160 ARG THR LEU THR SER ASN ASN ARG LEU VAL GLY MET LEU SEQRES 9 A 160 LYS TYR GLY GLY ARG VAL TRP THR PHE HIS GLY GLU THR SEQRES 10 A 160 PRO ARG ALA THR THR ASP SER SER ASN THR ALA ASP LEU SEQRES 11 A 160 ASN ASN ILE SER ILE ILE ILE HIS SER GLU PHE TYR ILE SEQRES 12 A 160 ILE PRO ARG SER GLN GLU SER LYS CYS ASN GLU TYR ILE SEQRES 13 A 160 ASN ASN GLY LEU SEQRES 1 B 160 VAL LEU ASP GLY PRO TYR GLN PRO THR THR PHE LYS PRO SEQRES 2 B 160 PRO ASN ASP TYR TRP LEU LEU ILE SER SER ASN THR ASP SEQRES 3 B 160 GLY VAL VAL TYR GLU SER THR ASN ASN SER ASP PHE TRP SEQRES 4 B 160 THR ALA VAL ILE ALA VAL GLU PRO HIS VAL SER GLN THR SEQRES 5 B 160 ASN ARG GLN TYR VAL LEU PHE GLY GLU ASN LYS GLN PHE SEQRES 6 B 160 ASN VAL GLU ASN ASN SER ASP LYS TRP LYS PHE PHE GLU SEQRES 7 B 160 MET PHE LYS GLY SER GLY GLN SER ASP PHE SER ASN ARG SEQRES 8 B 160 ARG THR LEU THR SER ASN ASN ARG LEU VAL GLY MET LEU SEQRES 9 B 160 LYS TYR GLY GLY ARG VAL TRP THR PHE HIS GLY GLU THR SEQRES 10 B 160 PRO ARG ALA THR THR ASP SER SER ASN THR ALA ASP LEU SEQRES 11 B 160 ASN ASN ILE SER ILE ILE ILE HIS SER GLU PHE TYR ILE SEQRES 12 B 160 ILE PRO ARG SER GLN GLU SER LYS CYS ASN GLU TYR ILE SEQRES 13 B 160 ASN ASN GLY LEU HET BGC C 1 12 HET GAL C 2 11 HET NAG C 3 14 HET GAL C 4 11 HET FUC C 5 10 HET FUC C 6 10 HET BGC E 1 12 HET GAL E 2 11 HET NAG E 3 14 HET GAL E 4 11 HET FUC E 5 10 HET FUC E 6 10 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 BGC 2(C6 H12 O6) FORMUL 3 GAL 4(C6 H12 O6) FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 3 FUC 4(C6 H12 O5) FORMUL 5 HOH *45(H2 O) HELIX 1 AA1 GLN A 148 GLY A 159 1 12 HELIX 2 AA2 ASP B 129 ILE B 133 5 5 HELIX 3 AA3 GLN B 148 GLY B 159 1 12 SHEET 1 AA111 ASP A 3 TYR A 6 0 SHEET 2 AA111 GLU A 140 PRO A 145 -1 O PHE A 141 N TYR A 6 SHEET 3 AA111 TYR A 17 SER A 22 -1 N LEU A 20 O TYR A 142 SHEET 4 AA111 LEU A 100 TYR A 106 -1 O MET A 103 N LEU A 19 SHEET 5 AA111 ARG A 109 GLU A 116 -1 O ARG A 109 N TYR A 106 SHEET 6 AA111 SER A 89 THR A 95 1 N THR A 93 O GLY A 115 SHEET 7 AA111 LYS A 75 LYS A 81 -1 N PHE A 76 O LEU A 94 SHEET 8 AA111 TRP A 39 VAL A 45 -1 N ALA A 41 O MET A 79 SHEET 9 AA111 GLY A 27 THR A 33 -1 N SER A 32 O THR A 40 SHEET 10 AA111 SER A 134 ILE A 137 -1 O ILE A 136 N GLU A 31 SHEET 11 AA111 THR A 9 PHE A 11 -1 N PHE A 11 O ILE A 135 SHEET 1 AA2 6 ASP A 3 TYR A 6 0 SHEET 2 AA2 6 GLU A 140 PRO A 145 -1 O PHE A 141 N TYR A 6 SHEET 3 AA2 6 TYR A 17 SER A 22 -1 N LEU A 20 O TYR A 142 SHEET 4 AA2 6 LEU A 100 TYR A 106 -1 O MET A 103 N LEU A 19 SHEET 5 AA2 6 ARG A 109 GLU A 116 -1 O ARG A 109 N TYR A 106 SHEET 6 AA2 6 THR A 121 ASN A 126 -1 O ASP A 123 N THR A 112 SHEET 1 AA3 2 VAL A 49 LEU A 58 0 SHEET 2 AA3 2 GLU A 61 ASN A 69 -1 O ASN A 69 N VAL A 49 SHEET 1 AA411 ASP B 3 TYR B 6 0 SHEET 2 AA411 GLU B 140 PRO B 145 -1 O PHE B 141 N TYR B 6 SHEET 3 AA411 TYR B 17 SER B 22 -1 N LEU B 20 O TYR B 142 SHEET 4 AA411 LEU B 100 TYR B 106 -1 O MET B 103 N LEU B 19 SHEET 5 AA411 ARG B 109 GLU B 116 -1 O ARG B 109 N TYR B 106 SHEET 6 AA411 SER B 89 THR B 95 1 N THR B 93 O GLY B 115 SHEET 7 AA411 LYS B 75 LYS B 81 -1 N PHE B 76 O LEU B 94 SHEET 8 AA411 TRP B 39 VAL B 45 -1 N ALA B 41 O MET B 79 SHEET 9 AA411 GLY B 27 THR B 33 -1 N SER B 32 O THR B 40 SHEET 10 AA411 SER B 134 ILE B 137 -1 O ILE B 136 N GLU B 31 SHEET 11 AA411 THR B 9 THR B 10 -1 N THR B 9 O ILE B 137 SHEET 1 AA5 6 ASP B 3 TYR B 6 0 SHEET 2 AA5 6 GLU B 140 PRO B 145 -1 O PHE B 141 N TYR B 6 SHEET 3 AA5 6 TYR B 17 SER B 22 -1 N LEU B 20 O TYR B 142 SHEET 4 AA5 6 LEU B 100 TYR B 106 -1 O MET B 103 N LEU B 19 SHEET 5 AA5 6 ARG B 109 GLU B 116 -1 O ARG B 109 N TYR B 106 SHEET 6 AA5 6 THR B 121 ASN B 126 -1 O ASP B 123 N THR B 112 SHEET 1 AA6 2 VAL B 49 LEU B 58 0 SHEET 2 AA6 2 GLU B 61 ASN B 69 -1 O ASN B 69 N VAL B 49 LINK O4 BGC C 1 C1 GAL C 2 1555 1555 1.43 LINK O3 GAL C 2 C1 NAG C 3 1555 1555 1.41 LINK O3 NAG C 3 C1 GAL C 4 1555 1555 1.38 LINK O4 NAG C 3 C1 FUC C 6 1555 1555 1.43 LINK O2 GAL C 4 C1 FUC C 5 1555 1555 1.38 LINK O4 BGC E 1 C1 GAL E 2 1555 1555 1.45 LINK O3 GAL E 2 C1 NAG E 3 1555 1555 1.43 LINK O3 NAG E 3 C1 GAL E 4 1555 1555 1.36 LINK O4 NAG E 3 C1 FUC E 6 1555 1555 1.47 LINK O2 GAL E 4 C1 FUC E 5 1555 1555 1.42 CISPEP 1 GLY A 4 PRO A 5 0 10.51 CISPEP 2 THR A 117 PRO A 118 0 8.85 CISPEP 3 GLY B 4 PRO B 5 0 12.28 CISPEP 4 THR B 117 PRO B 118 0 7.20 CRYST1 36.319 38.432 55.808 104.73 90.11 96.04 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027534 0.002913 0.000826 0.00000 SCALE2 0.000000 0.026165 0.006926 0.00000 SCALE3 0.000000 0.000000 0.018536 0.00000