data_7KIH # _entry.id 7KIH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7KIH pdb_00007kih 10.2210/pdb7kih/pdb WWPDB D_1000252535 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7KIH _pdbx_database_status.recvd_initial_deposition_date 2020-10-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category FoldIt _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gu, W.' 1 ? 'Airola, M.V.' 2 0000-0003-4981-1253 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 4718 _citation.page_last 4718 _citation.title 'The middle lipin domain adopts a membrane-binding dimeric protein fold.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-021-24929-5 _citation.pdbx_database_id_PubMed 34354069 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gu, W.' 1 0000-0001-9464-2298 primary 'Gao, S.' 2 ? primary 'Wang, H.' 3 0000-0003-1115-143X primary 'Fleming, K.D.' 4 0000-0003-3063-7865 primary 'Hoffmann, R.M.' 5 ? primary 'Yang, J.W.' 6 ? primary 'Patel, N.M.' 7 0000-0001-5744-4663 primary 'Choi, Y.M.' 8 ? primary 'Burke, J.E.' 9 0000-0001-7904-9859 primary 'Reue, K.' 10 0000-0002-7487-2624 primary 'Airola, M.V.' 11 0000-0003-4981-1253 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7KIH _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.139 _cell.length_a_esd ? _cell.length_b 59.319 _cell.length_b_esd ? _cell.length_c 67.442 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KIH _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Isoform 2 of Phosphatidate phosphatase LPIN1' 10101.611 1 ? ? 'M-Lip domain' ? 2 water nat water 18.015 121 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Fatty liver dystrophy protein,Lipin-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SLRDLPSIAISLCGGLSDHREITKDAFLEQAVSYQQFADNPAIIDDPNLVVKVGNKYYNWTTAAPLLLAMQAFQKPLPKA TVESIMRDKMP ; _entity_poly.pdbx_seq_one_letter_code_can ;SLRDLPSIAISLCGGLSDHREITKDAFLEQAVSYQQFADNPAIIDDPNLVVKVGNKYYNWTTAAPLLLAMQAFQKPLPKA TVESIMRDKMP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 ARG n 1 4 ASP n 1 5 LEU n 1 6 PRO n 1 7 SER n 1 8 ILE n 1 9 ALA n 1 10 ILE n 1 11 SER n 1 12 LEU n 1 13 CYS n 1 14 GLY n 1 15 GLY n 1 16 LEU n 1 17 SER n 1 18 ASP n 1 19 HIS n 1 20 ARG n 1 21 GLU n 1 22 ILE n 1 23 THR n 1 24 LYS n 1 25 ASP n 1 26 ALA n 1 27 PHE n 1 28 LEU n 1 29 GLU n 1 30 GLN n 1 31 ALA n 1 32 VAL n 1 33 SER n 1 34 TYR n 1 35 GLN n 1 36 GLN n 1 37 PHE n 1 38 ALA n 1 39 ASP n 1 40 ASN n 1 41 PRO n 1 42 ALA n 1 43 ILE n 1 44 ILE n 1 45 ASP n 1 46 ASP n 1 47 PRO n 1 48 ASN n 1 49 LEU n 1 50 VAL n 1 51 VAL n 1 52 LYS n 1 53 VAL n 1 54 GLY n 1 55 ASN n 1 56 LYS n 1 57 TYR n 1 58 TYR n 1 59 ASN n 1 60 TRP n 1 61 THR n 1 62 THR n 1 63 ALA n 1 64 ALA n 1 65 PRO n 1 66 LEU n 1 67 LEU n 1 68 LEU n 1 69 ALA n 1 70 MET n 1 71 GLN n 1 72 ALA n 1 73 PHE n 1 74 GLN n 1 75 LYS n 1 76 PRO n 1 77 LEU n 1 78 PRO n 1 79 LYS n 1 80 ALA n 1 81 THR n 1 82 VAL n 1 83 GLU n 1 84 SER n 1 85 ILE n 1 86 MET n 1 87 ARG n 1 88 ASP n 1 89 LYS n 1 90 MET n 1 91 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 91 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Lpin1, Fld' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant RIPL _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ppSUMO _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LPIN1_MOUSE _struct_ref.pdbx_db_accession Q91ZP3 _struct_ref.pdbx_db_isoform Q91ZP3-2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLRDLPSIAISLCGGLSDHREITKDAFLEQAVSYQQFADNPAIIDDPNLVVKVGNKYYNWTTAAPLLLAMQAFQKPLPKA TVESIMRDKMP ; _struct_ref.pdbx_align_begin 458 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7KIH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 91 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q91ZP3 _struct_ref_seq.db_align_beg 458 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 548 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 458 _struct_ref_seq.pdbx_auth_seq_align_end 548 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7KIH _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity 0.200 _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 3000, Tris HCl' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 193 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-11-07 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 24.850 _reflns.entry_id 7KIH _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.4670 _reflns.d_resolution_low 67.440 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15308 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.200 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.800 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.051 _reflns.pdbx_Rpim_I_all 0.021 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.4670 1.490 ? ? 1710 ? ? ? 609 81.700 ? ? ? ? 0.590 ? ? ? ? ? ? ? ? 2.800 ? ? ? 1.100 0.706 0.379 ? 1 1 0.872 ? ? 8.040 67.440 ? ? 584 ? ? ? 121 99.200 ? ? ? ? 0.043 ? ? ? ? ? ? ? ? 4.800 ? ? ? 36.000 0.049 0.022 ? 2 1 0.998 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 145.590 _refine.B_iso_mean 45.7034 _refine.B_iso_min 24.400 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7KIH _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4670 _refine.ls_d_res_low 35.4110 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15241 _refine.ls_number_reflns_R_free 710 _refine.ls_number_reflns_R_work 14531 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.2800 _refine.ls_percent_reflns_R_free 4.6600 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1837 _refine.ls_R_factor_R_free 0.2156 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1821 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.380 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 38.2100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2500 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.4670 _refine_hist.d_res_low 35.4110 _refine_hist.number_atoms_solvent 121 _refine_hist.number_atoms_total 805 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 88 _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent 52.20 _refine_hist.pdbx_number_atoms_protein 684 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.4673 1.5806 . . 122 2719 93.0000 . . . 0.4868 0.0000 0.4061 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5806 1.7396 . . 127 2895 99.0000 . . . 0.3004 0.0000 0.2301 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7396 1.9913 . . 143 2923 100.0000 . . . 0.2501 0.0000 0.1989 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9913 2.5088 . . 166 2927 100.0000 . . . 0.2186 0.0000 0.1933 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5088 35.4110 . . 152 3067 100.0000 . . . 0.1902 0.0000 0.1598 . . . . . . . . . . . # _struct.entry_id 7KIH _struct.title 'Crystal structure of the mouse lipin-1 M-Lip domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7KIH _struct_keywords.text 'lipin, M-Lip, dimer, LIPID BINDING PROTEIN' _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 23 ? GLN A 30 ? THR A 480 GLN A 487 1 ? 8 HELX_P HELX_P2 AA2 SER A 33 ? ASN A 40 ? SER A 490 ASN A 497 1 ? 8 HELX_P HELX_P3 AA3 PRO A 41 ? ASP A 46 ? PRO A 498 ASP A 503 5 ? 6 HELX_P HELX_P4 AA4 ASN A 59 ? GLN A 74 ? ASN A 516 GLN A 531 1 ? 16 HELX_P HELX_P5 AA5 PRO A 78 ? MET A 90 ? PRO A 535 MET A 547 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 8 ? SER A 11 ? ILE A 465 SER A 468 AA1 2 VAL A 50 ? VAL A 53 ? VAL A 507 VAL A 510 AA1 3 LYS A 56 ? TYR A 58 ? LYS A 513 TYR A 515 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 9 ? N ALA A 466 O LYS A 52 ? O LYS A 509 AA1 2 3 N VAL A 51 ? N VAL A 508 O TYR A 58 ? O TYR A 515 # _atom_sites.entry_id 7KIH _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.022656 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016858 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014828 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 458 ? ? ? A . n A 1 2 LEU 2 459 ? ? ? A . n A 1 3 ARG 3 460 ? ? ? A . n A 1 4 ASP 4 461 461 ASP ASP A . n A 1 5 LEU 5 462 462 LEU LEU A . n A 1 6 PRO 6 463 463 PRO PRO A . n A 1 7 SER 7 464 464 SER SER A . n A 1 8 ILE 8 465 465 ILE ILE A . n A 1 9 ALA 9 466 466 ALA ALA A . n A 1 10 ILE 10 467 467 ILE ILE A . n A 1 11 SER 11 468 468 SER SER A . n A 1 12 LEU 12 469 469 LEU LEU A . n A 1 13 CYS 13 470 470 CYS CYS A . n A 1 14 GLY 14 471 471 GLY GLY A . n A 1 15 GLY 15 472 472 GLY GLY A . n A 1 16 LEU 16 473 473 LEU LEU A . n A 1 17 SER 17 474 474 SER SER A . n A 1 18 ASP 18 475 475 ASP ASP A . n A 1 19 HIS 19 476 476 HIS HIS A . n A 1 20 ARG 20 477 477 ARG ARG A . n A 1 21 GLU 21 478 478 GLU GLU A . n A 1 22 ILE 22 479 479 ILE ILE A . n A 1 23 THR 23 480 480 THR THR A . n A 1 24 LYS 24 481 481 LYS LYS A . n A 1 25 ASP 25 482 482 ASP ASP A . n A 1 26 ALA 26 483 483 ALA ALA A . n A 1 27 PHE 27 484 484 PHE PHE A . n A 1 28 LEU 28 485 485 LEU LEU A . n A 1 29 GLU 29 486 486 GLU GLU A . n A 1 30 GLN 30 487 487 GLN GLN A . n A 1 31 ALA 31 488 488 ALA ALA A . n A 1 32 VAL 32 489 489 VAL VAL A . n A 1 33 SER 33 490 490 SER SER A . n A 1 34 TYR 34 491 491 TYR TYR A . n A 1 35 GLN 35 492 492 GLN GLN A . n A 1 36 GLN 36 493 493 GLN GLN A . n A 1 37 PHE 37 494 494 PHE PHE A . n A 1 38 ALA 38 495 495 ALA ALA A . n A 1 39 ASP 39 496 496 ASP ASP A . n A 1 40 ASN 40 497 497 ASN ASN A . n A 1 41 PRO 41 498 498 PRO PRO A . n A 1 42 ALA 42 499 499 ALA ALA A . n A 1 43 ILE 43 500 500 ILE ILE A . n A 1 44 ILE 44 501 501 ILE ILE A . n A 1 45 ASP 45 502 502 ASP ASP A . n A 1 46 ASP 46 503 503 ASP ASP A . n A 1 47 PRO 47 504 504 PRO PRO A . n A 1 48 ASN 48 505 505 ASN ASN A . n A 1 49 LEU 49 506 506 LEU LEU A . n A 1 50 VAL 50 507 507 VAL VAL A . n A 1 51 VAL 51 508 508 VAL VAL A . n A 1 52 LYS 52 509 509 LYS LYS A . n A 1 53 VAL 53 510 510 VAL VAL A . n A 1 54 GLY 54 511 511 GLY GLY A . n A 1 55 ASN 55 512 512 ASN ASN A . n A 1 56 LYS 56 513 513 LYS LYS A . n A 1 57 TYR 57 514 514 TYR TYR A . n A 1 58 TYR 58 515 515 TYR TYR A . n A 1 59 ASN 59 516 516 ASN ASN A . n A 1 60 TRP 60 517 517 TRP TRP A . n A 1 61 THR 61 518 518 THR THR A . n A 1 62 THR 62 519 519 THR THR A . n A 1 63 ALA 63 520 520 ALA ALA A . n A 1 64 ALA 64 521 521 ALA ALA A . n A 1 65 PRO 65 522 522 PRO PRO A . n A 1 66 LEU 66 523 523 LEU LEU A . n A 1 67 LEU 67 524 524 LEU LEU A . n A 1 68 LEU 68 525 525 LEU LEU A . n A 1 69 ALA 69 526 526 ALA ALA A . n A 1 70 MET 70 527 527 MET MET A . n A 1 71 GLN 71 528 528 GLN GLN A . n A 1 72 ALA 72 529 529 ALA ALA A . n A 1 73 PHE 73 530 530 PHE PHE A . n A 1 74 GLN 74 531 531 GLN GLN A . n A 1 75 LYS 75 532 532 LYS LYS A . n A 1 76 PRO 76 533 533 PRO PRO A . n A 1 77 LEU 77 534 534 LEU LEU A . n A 1 78 PRO 78 535 535 PRO PRO A . n A 1 79 LYS 79 536 536 LYS LYS A . n A 1 80 ALA 80 537 537 ALA ALA A . n A 1 81 THR 81 538 538 THR THR A . n A 1 82 VAL 82 539 539 VAL VAL A . n A 1 83 GLU 83 540 540 GLU GLU A . n A 1 84 SER 84 541 541 SER SER A . n A 1 85 ILE 85 542 542 ILE ILE A . n A 1 86 MET 86 543 543 MET MET A . n A 1 87 ARG 87 544 544 ARG ARG A . n A 1 88 ASP 88 545 545 ASP ASP A . n A 1 89 LYS 89 546 546 LYS LYS A . n A 1 90 MET 90 547 547 MET MET A . n A 1 91 PRO 91 548 548 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 601 36 HOH HOH A . B 2 HOH 2 602 139 HOH HOH A . B 2 HOH 3 603 116 HOH HOH A . B 2 HOH 4 604 99 HOH HOH A . B 2 HOH 5 605 121 HOH HOH A . B 2 HOH 6 606 109 HOH HOH A . B 2 HOH 7 607 88 HOH HOH A . B 2 HOH 8 608 74 HOH HOH A . B 2 HOH 9 609 81 HOH HOH A . B 2 HOH 10 610 48 HOH HOH A . B 2 HOH 11 611 114 HOH HOH A . B 2 HOH 12 612 93 HOH HOH A . B 2 HOH 13 613 113 HOH HOH A . B 2 HOH 14 614 95 HOH HOH A . B 2 HOH 15 615 130 HOH HOH A . B 2 HOH 16 616 126 HOH HOH A . B 2 HOH 17 617 59 HOH HOH A . B 2 HOH 18 618 140 HOH HOH A . B 2 HOH 19 619 49 HOH HOH A . B 2 HOH 20 620 123 HOH HOH A . B 2 HOH 21 621 138 HOH HOH A . B 2 HOH 22 622 37 HOH HOH A . B 2 HOH 23 623 11 HOH HOH A . B 2 HOH 24 624 115 HOH HOH A . B 2 HOH 25 625 58 HOH HOH A . B 2 HOH 26 626 40 HOH HOH A . B 2 HOH 27 627 14 HOH HOH A . B 2 HOH 28 628 5 HOH HOH A . B 2 HOH 29 629 16 HOH HOH A . B 2 HOH 30 630 110 HOH HOH A . B 2 HOH 31 631 13 HOH HOH A . B 2 HOH 32 632 51 HOH HOH A . B 2 HOH 33 633 34 HOH HOH A . B 2 HOH 34 634 55 HOH HOH A . B 2 HOH 35 635 39 HOH HOH A . B 2 HOH 36 636 53 HOH HOH A . B 2 HOH 37 637 100 HOH HOH A . B 2 HOH 38 638 22 HOH HOH A . B 2 HOH 39 639 15 HOH HOH A . B 2 HOH 40 640 31 HOH HOH A . B 2 HOH 41 641 9 HOH HOH A . B 2 HOH 42 642 35 HOH HOH A . B 2 HOH 43 643 12 HOH HOH A . B 2 HOH 44 644 17 HOH HOH A . B 2 HOH 45 645 3 HOH HOH A . B 2 HOH 46 646 6 HOH HOH A . B 2 HOH 47 647 122 HOH HOH A . B 2 HOH 48 648 1 HOH HOH A . B 2 HOH 49 649 32 HOH HOH A . B 2 HOH 50 650 27 HOH HOH A . B 2 HOH 51 651 117 HOH HOH A . B 2 HOH 52 652 71 HOH HOH A . B 2 HOH 53 653 70 HOH HOH A . B 2 HOH 54 654 2 HOH HOH A . B 2 HOH 55 655 118 HOH HOH A . B 2 HOH 56 656 42 HOH HOH A . B 2 HOH 57 657 65 HOH HOH A . B 2 HOH 58 658 112 HOH HOH A . B 2 HOH 59 659 7 HOH HOH A . B 2 HOH 60 660 82 HOH HOH A . B 2 HOH 61 661 30 HOH HOH A . B 2 HOH 62 662 92 HOH HOH A . B 2 HOH 63 663 75 HOH HOH A . B 2 HOH 64 664 46 HOH HOH A . B 2 HOH 65 665 56 HOH HOH A . B 2 HOH 66 666 103 HOH HOH A . B 2 HOH 67 667 10 HOH HOH A . B 2 HOH 68 668 83 HOH HOH A . B 2 HOH 69 669 127 HOH HOH A . B 2 HOH 70 670 4 HOH HOH A . B 2 HOH 71 671 57 HOH HOH A . B 2 HOH 72 672 132 HOH HOH A . B 2 HOH 73 673 19 HOH HOH A . B 2 HOH 74 674 38 HOH HOH A . B 2 HOH 75 675 21 HOH HOH A . B 2 HOH 76 676 43 HOH HOH A . B 2 HOH 77 677 28 HOH HOH A . B 2 HOH 78 678 105 HOH HOH A . B 2 HOH 79 679 68 HOH HOH A . B 2 HOH 80 680 62 HOH HOH A . B 2 HOH 81 681 120 HOH HOH A . B 2 HOH 82 682 106 HOH HOH A . B 2 HOH 83 683 135 HOH HOH A . B 2 HOH 84 684 101 HOH HOH A . B 2 HOH 85 685 33 HOH HOH A . B 2 HOH 86 686 61 HOH HOH A . B 2 HOH 87 687 64 HOH HOH A . B 2 HOH 88 688 102 HOH HOH A . B 2 HOH 89 689 8 HOH HOH A . B 2 HOH 90 690 136 HOH HOH A . B 2 HOH 91 691 96 HOH HOH A . B 2 HOH 92 692 66 HOH HOH A . B 2 HOH 93 693 111 HOH HOH A . B 2 HOH 94 694 124 HOH HOH A . B 2 HOH 95 695 77 HOH HOH A . B 2 HOH 96 696 45 HOH HOH A . B 2 HOH 97 697 89 HOH HOH A . B 2 HOH 98 698 72 HOH HOH A . B 2 HOH 99 699 44 HOH HOH A . B 2 HOH 100 700 50 HOH HOH A . B 2 HOH 101 701 84 HOH HOH A . B 2 HOH 102 702 24 HOH HOH A . B 2 HOH 103 703 60 HOH HOH A . B 2 HOH 104 704 85 HOH HOH A . B 2 HOH 105 705 125 HOH HOH A . B 2 HOH 106 706 80 HOH HOH A . B 2 HOH 107 707 29 HOH HOH A . B 2 HOH 108 708 87 HOH HOH A . B 2 HOH 109 709 23 HOH HOH A . B 2 HOH 110 710 134 HOH HOH A . B 2 HOH 111 711 20 HOH HOH A . B 2 HOH 112 712 18 HOH HOH A . B 2 HOH 113 713 91 HOH HOH A . B 2 HOH 114 714 90 HOH HOH A . B 2 HOH 115 715 133 HOH HOH A . B 2 HOH 116 716 25 HOH HOH A . B 2 HOH 117 717 41 HOH HOH A . B 2 HOH 118 718 129 HOH HOH A . B 2 HOH 119 719 128 HOH HOH A . B 2 HOH 120 720 94 HOH HOH A . B 2 HOH 121 721 26 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2530 ? 1 MORE -23 ? 1 'SSA (A^2)' 9760 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 59.3190000000 0.0000000000 0.0000000000 -1.0000000000 67.4420000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ARG 477 ? A ARG 20 2 1 A ARG 477 ? A ARG 20 3 1 A GLN 528 ? A GLN 71 4 1 A HOH 664 ? B HOH . 5 1 A HOH 670 ? B HOH . 6 1 A HOH 684 ? B HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-07-07 2 'Structure model' 1 1 2021-10-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_database_2.pdbx_DOI' 13 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.23 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? pointless ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.13_2998 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A ASP 475 ? ? O A HOH 611 ? ? 1.48 2 1 OD2 A ASP 475 ? ? O A HOH 601 ? ? 1.87 3 1 O A HOH 611 ? ? O A HOH 678 ? ? 1.92 4 1 O A CYS 470 ? ? O A HOH 602 ? ? 1.93 5 1 OD1 A ASP 475 ? ? O A HOH 603 ? ? 1.98 6 1 O A HOH 619 ? ? O A HOH 687 ? ? 2.00 7 1 O A HOH 651 ? ? O A HOH 698 ? ? 2.01 8 1 O A HOH 658 ? ? O A HOH 692 ? ? 2.02 9 1 O A HOH 686 ? ? O A HOH 700 ? ? 2.02 10 1 O A HOH 640 ? ? O A HOH 698 ? ? 2.02 11 1 O A HOH 614 ? ? O A HOH 683 ? ? 2.04 12 1 O A HOH 603 ? ? O A HOH 691 ? ? 2.06 13 1 O A HOH 705 ? ? O A HOH 708 ? ? 2.07 14 1 NH1 A ARG 477 ? B O A HOH 604 ? ? 2.10 15 1 O A HOH 653 ? ? O A HOH 694 ? ? 2.11 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 H A THR 480 ? ? 1_555 O A HOH 601 ? ? 3_755 1.59 2 1 NH2 A ARG 477 ? A 1_555 O A HOH 602 ? ? 3_755 2.12 3 1 O A HOH 618 ? ? 1_555 O A HOH 642 ? ? 3_755 2.15 4 1 O A HOH 617 ? ? 1_555 O A HOH 634 ? ? 3_755 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 476 ? ? 72.07 42.35 2 1 HIS A 476 ? ? 72.07 47.38 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 458 ? A SER 1 2 1 Y 1 A LEU 459 ? A LEU 2 3 1 Y 1 A ARG 460 ? A ARG 3 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R35GM128666 1 'American Heart Association' 'United States' 17SDG33410860 2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #