HEADER CELL ADHESION 27-OCT-20 7KK7 TITLE CRYSTAL STRUCTURE OF LIGAND-FREE PLEKHA7 PH DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY A MEMBER 7; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PH DOMAIN-CONTAINING FAMILY A MEMBER 7; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLEKHA7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PLEKHA7, PH DOMAIN, PLECKSTRIN HOMOLOGY DOMAIN, PIP, INOSITOL- KEYWDS 2 PHOSPHATE, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR F.M.MARASSI,A.E.ALESHIN,R.C.LIDDINGTON REVDAT 4 18-OCT-23 7KK7 1 REMARK REVDAT 3 15-SEP-21 7KK7 1 JRNL REVDAT 2 05-MAY-21 7KK7 1 JRNL REVDAT 1 07-APR-21 7KK7 0 JRNL AUTH A.E.ALESHIN,Y.YAO,A.IFTIKHAR,A.A.BOBKOV,J.YU,G.CADWELL, JRNL AUTH 2 M.G.KLEIN,C.DONG,L.A.BANKSTON,R.C.LIDDINGTON,W.IM,G.POWIS, JRNL AUTH 3 F.M.MARASSI JRNL TITL STRUCTURAL BASIS FOR THE ASSOCIATION OF PLEKHA7 WITH JRNL TITL 2 MEMBRANE-EMBEDDED PHOSPHATIDYLINOSITOL LIPIDS. JRNL REF STRUCTURE V. 29 1029 2021 JRNL REFN ISSN 0969-2126 JRNL PMID 33878292 JRNL DOI 10.1016/J.STR.2021.03.018 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 6495 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.500 REMARK 3 FREE R VALUE TEST SET COUNT : 453 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 474 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3350 REMARK 3 BIN FREE R VALUE SET COUNT : 21 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1671 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 8 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 93.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.27000 REMARK 3 B22 (A**2) : -4.84000 REMARK 3 B33 (A**2) : -2.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.405 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.320 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 37.113 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1737 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1596 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2346 ; 1.784 ; 1.644 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3670 ; 1.260 ; 1.581 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 198 ; 8.433 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 102 ;25.468 ;19.608 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 281 ;19.271 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.945 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 206 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1904 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 430 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 163 282 B 163 282 2880 0.170 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 161 A 284 REMARK 3 RESIDUE RANGE : A 301 A 302 REMARK 3 ORIGIN FOR THE GROUP (A): -13.909 -6.436 19.145 REMARK 3 T TENSOR REMARK 3 T11: 0.0555 T22: 0.2505 REMARK 3 T33: 0.0773 T12: 0.1114 REMARK 3 T13: -0.0058 T23: -0.0368 REMARK 3 L TENSOR REMARK 3 L11: 6.5847 L22: 7.6871 REMARK 3 L33: 11.8589 L12: -1.5559 REMARK 3 L13: 2.8022 L23: 0.1925 REMARK 3 S TENSOR REMARK 3 S11: -0.0694 S12: -0.5228 S13: 0.1304 REMARK 3 S21: -0.0075 S22: -0.1004 S23: 0.7082 REMARK 3 S31: -0.7924 S32: -1.7100 S33: 0.1697 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 163 B 283 REMARK 3 RESIDUE RANGE : B 301 B 301 REMARK 3 ORIGIN FOR THE GROUP (A): -9.140 -30.611 8.474 REMARK 3 T TENSOR REMARK 3 T11: 0.2013 T22: 0.2402 REMARK 3 T33: 0.2420 T12: -0.1411 REMARK 3 T13: -0.0352 T23: -0.1451 REMARK 3 L TENSOR REMARK 3 L11: 7.3349 L22: 8.0649 REMARK 3 L33: 12.3613 L12: -0.8877 REMARK 3 L13: -0.5232 L23: 1.7803 REMARK 3 S TENSOR REMARK 3 S11: -0.1277 S12: 0.7200 S13: -1.0499 REMARK 3 S21: -0.6191 S22: -0.2781 S23: 0.9588 REMARK 3 S31: 1.1820 S32: -1.4625 S33: 0.4059 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7KK7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1000252598. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1158 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 300K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6980 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.81000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7KJO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN IN 180 MM NACL, 20 MM TRIS PH REMARK 280 8, 50 MM BISTRIS PH 6.0, 0.7 MM TCEP WAS MIXED WITH 20% PEG 3350, REMARK 280 0.02 MM MGCL2, 100 MM HEPES PH 7.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.65500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.23500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.53000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.23500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.65500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.53000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 159 REMARK 465 PRO A 160 REMARK 465 GLY A 237 REMARK 465 MET A 238 REMARK 465 ARG A 239 REMARK 465 ALA A 240 REMARK 465 LEU A 241 REMARK 465 ILE A 242 REMARK 465 TYR A 243 REMARK 465 ASN A 244 REMARK 465 SER A 245 REMARK 465 SER A 246 REMARK 465 THR A 247 REMARK 465 ALA A 248 REMARK 465 GLY A 249 REMARK 465 SER A 250 REMARK 465 GLN A 251 REMARK 465 ALA A 252 REMARK 465 GLU A 253 REMARK 465 GLN A 254 REMARK 465 SER A 255 REMARK 465 GLY A 256 REMARK 465 MET A 257 REMARK 465 SER A 285 REMARK 465 GLY B 159 REMARK 465 PRO B 160 REMARK 465 LEU B 161 REMARK 465 GLY B 162 REMARK 465 THR B 236 REMARK 465 GLY B 237 REMARK 465 MET B 238 REMARK 465 ARG B 239 REMARK 465 ALA B 240 REMARK 465 LEU B 241 REMARK 465 ILE B 242 REMARK 465 TYR B 243 REMARK 465 ASN B 244 REMARK 465 SER B 245 REMARK 465 SER B 246 REMARK 465 THR B 247 REMARK 465 ALA B 248 REMARK 465 GLY B 249 REMARK 465 SER B 250 REMARK 465 GLN B 251 REMARK 465 ALA B 252 REMARK 465 GLU B 253 REMARK 465 GLN B 254 REMARK 465 SER B 255 REMARK 465 GLY B 256 REMARK 465 MET B 257 REMARK 465 LEU B 284 REMARK 465 SER B 285 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 203 -74.49 -90.86 REMARK 500 VAL A 219 72.21 44.27 REMARK 500 MET B 179 48.44 -94.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7KJO RELATED DB: PDB REMARK 900 RELATED ID: 7KJZ RELATED DB: PDB DBREF 7KK7 A 164 285 UNP Q6IQ23 PKHA7_HUMAN 164 285 DBREF 7KK7 B 164 285 UNP Q6IQ23 PKHA7_HUMAN 164 285 SEQADV 7KK7 GLY A 159 UNP Q6IQ23 EXPRESSION TAG SEQADV 7KK7 PRO A 160 UNP Q6IQ23 EXPRESSION TAG SEQADV 7KK7 LEU A 161 UNP Q6IQ23 EXPRESSION TAG SEQADV 7KK7 GLY A 162 UNP Q6IQ23 EXPRESSION TAG SEQADV 7KK7 SER A 163 UNP Q6IQ23 EXPRESSION TAG SEQADV 7KK7 GLY B 159 UNP Q6IQ23 EXPRESSION TAG SEQADV 7KK7 PRO B 160 UNP Q6IQ23 EXPRESSION TAG SEQADV 7KK7 LEU B 161 UNP Q6IQ23 EXPRESSION TAG SEQADV 7KK7 GLY B 162 UNP Q6IQ23 EXPRESSION TAG SEQADV 7KK7 SER B 163 UNP Q6IQ23 EXPRESSION TAG SEQRES 1 A 127 GLY PRO LEU GLY SER PRO VAL VAL VAL ARG GLY TRP LEU SEQRES 2 A 127 HIS LYS GLN ASP SER SER GLY MET ARG LEU TRP LYS ARG SEQRES 3 A 127 ARG TRP PHE VAL LEU ALA ASP TYR CYS LEU PHE TYR TYR SEQRES 4 A 127 LYS ASP SER ARG GLU GLU ALA VAL LEU GLY SER ILE PRO SEQRES 5 A 127 LEU PRO SER TYR VAL ILE SER PRO VAL ALA PRO GLU ASP SEQRES 6 A 127 ARG ILE SER ARG LYS TYR SER PHE LYS ALA VAL HIS THR SEQRES 7 A 127 GLY MET ARG ALA LEU ILE TYR ASN SER SER THR ALA GLY SEQRES 8 A 127 SER GLN ALA GLU GLN SER GLY MET ARG THR TYR TYR PHE SEQRES 9 A 127 SER ALA ASP THR GLN GLU ASP MET ASN ALA TRP VAL ARG SEQRES 10 A 127 ALA MET ASN GLN ALA ALA GLN VAL LEU SER SEQRES 1 B 127 GLY PRO LEU GLY SER PRO VAL VAL VAL ARG GLY TRP LEU SEQRES 2 B 127 HIS LYS GLN ASP SER SER GLY MET ARG LEU TRP LYS ARG SEQRES 3 B 127 ARG TRP PHE VAL LEU ALA ASP TYR CYS LEU PHE TYR TYR SEQRES 4 B 127 LYS ASP SER ARG GLU GLU ALA VAL LEU GLY SER ILE PRO SEQRES 5 B 127 LEU PRO SER TYR VAL ILE SER PRO VAL ALA PRO GLU ASP SEQRES 6 B 127 ARG ILE SER ARG LYS TYR SER PHE LYS ALA VAL HIS THR SEQRES 7 B 127 GLY MET ARG ALA LEU ILE TYR ASN SER SER THR ALA GLY SEQRES 8 B 127 SER GLN ALA GLU GLN SER GLY MET ARG THR TYR TYR PHE SEQRES 9 B 127 SER ALA ASP THR GLN GLU ASP MET ASN ALA TRP VAL ARG SEQRES 10 B 127 ALA MET ASN GLN ALA ALA GLN VAL LEU SER HET GOL A 301 6 HET EDO A 302 4 HET GOL B 301 6 HET GOL B 302 6 HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GOL 3(C3 H8 O3) FORMUL 4 EDO C2 H6 O2 FORMUL 7 HOH *8(H2 O) HELIX 1 AA1 THR A 266 GLN A 282 1 17 HELIX 2 AA2 THR B 266 GLN B 282 1 17 SHEET 1 AA1 7 VAL A 205 PRO A 210 0 SHEET 2 AA1 7 CYS A 193 TYR A 197 -1 N LEU A 194 O ILE A 209 SHEET 3 AA1 7 TRP A 182 ALA A 190 -1 N VAL A 188 O PHE A 195 SHEET 4 AA1 7 VAL A 165 GLN A 174 -1 N GLY A 169 O PHE A 187 SHEET 5 AA1 7 THR A 259 SER A 263 -1 O SER A 263 N HIS A 172 SHEET 6 AA1 7 SER A 230 VAL A 234 -1 N PHE A 231 O PHE A 262 SHEET 7 AA1 7 VAL A 215 PRO A 218 -1 N VAL A 215 O VAL A 234 SHEET 1 AA2 7 VAL B 205 PRO B 210 0 SHEET 2 AA2 7 CYS B 193 TYR B 197 -1 N TYR B 196 O LEU B 206 SHEET 3 AA2 7 TRP B 182 ALA B 190 -1 N TRP B 186 O TYR B 197 SHEET 4 AA2 7 VAL B 165 GLN B 174 -1 N VAL B 166 O LEU B 189 SHEET 5 AA2 7 TYR B 260 SER B 263 -1 O SER B 263 N HIS B 172 SHEET 6 AA2 7 SER B 230 VAL B 234 -1 N PHE B 231 O PHE B 262 SHEET 7 AA2 7 VAL B 215 PRO B 218 -1 N VAL B 215 O VAL B 234 SITE 1 AC1 4 HIS A 172 ARG A 184 ARG A 227 EDO A 302 SITE 1 AC2 3 LYS A 183 ARG A 184 GOL A 301 SITE 1 AC3 2 ARG A 224 HIS B 172 SITE 1 AC4 3 HIS A 235 SER B 163 ASP B 191 CRYST1 57.310 59.060 78.470 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017449 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016932 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012744 0.00000