data_7KLR # _entry.id 7KLR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 7KLR WWPDB D_1000252685 BMRB 30809 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '7KLO is the apo structure of PHD1' 7KLO unspecified BMRB 'Solution structure of the PHD1 domain of histone demethylase KDM5A in complex with a histone H3(1-10) peptide' 30809 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7KLR _pdbx_database_status.recvd_initial_deposition_date 2020-10-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Longbotham, E.J.' 1 0000-0002-0878-3359 'Kelly, M.J.S.' 2 0000-0003-3209-1018 'Fujimori, D.G.' 3 0000-0002-4066-9417 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Chem.Biol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1554-8937 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Recognition of Histone H3 Methylation States by the PHD1 Domain of Histone Demethylase KDM5A.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acschembio.0c00976 _citation.pdbx_database_id_PubMed 33621062 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Longbotham, J.E.' 1 0000-0002-0878-3359 primary 'Kelly, M.J.S.' 2 0000-0003-3209-1018 primary 'Fujimori, D.G.' 3 0000-0002-4066-9417 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lysine-specific demethylase 5A' 6605.556 1 1.14.11.67 ? ? ? 2 polymer man 'Histone H3.1' 1150.332 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;Histone demethylase JARID1A,Jumonji/ARID domain-containing protein 1A,Retinoblastoma-binding protein 2,RBBP-2,[histone H3]-trimethyl-L-lysine(4) demethylase 5A ; 2 'Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEE GSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEE A ? 2 'polypeptide(L)' no no ARTKQTARKS ARTKQTARKS B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 VAL n 1 4 ASN n 1 5 PHE n 1 6 VAL n 1 7 ASP n 1 8 LEU n 1 9 TYR n 1 10 VAL n 1 11 CYS n 1 12 MET n 1 13 PHE n 1 14 CYS n 1 15 GLY n 1 16 ARG n 1 17 GLY n 1 18 ASN n 1 19 ASN n 1 20 GLU n 1 21 ASP n 1 22 LYS n 1 23 LEU n 1 24 LEU n 1 25 LEU n 1 26 CYS n 1 27 ASP n 1 28 GLY n 1 29 CYS n 1 30 ASP n 1 31 ASP n 1 32 SER n 1 33 TYR n 1 34 HIS n 1 35 THR n 1 36 PHE n 1 37 CYS n 1 38 LEU n 1 39 ILE n 1 40 PRO n 1 41 PRO n 1 42 LEU n 1 43 PRO n 1 44 ASP n 1 45 VAL n 1 46 PRO n 1 47 LYS n 1 48 GLY n 1 49 ASP n 1 50 TRP n 1 51 ARG n 1 52 CYS n 1 53 PRO n 1 54 LYS n 1 55 CYS n 1 56 VAL n 1 57 ALA n 1 58 GLU n 1 59 GLU n 2 1 ALA n 2 2 ARG n 2 3 THR n 2 4 LYS n 2 5 GLN n 2 6 THR n 2 7 ALA n 2 8 ARG n 2 9 LYS n 2 10 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 59 Human ? 'KDM5A, JARID1A, RBBP2, RBP2' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 10 Human ? ;H3C1, H3FA, HIST1H3A, H3C2, H3FL, HIST1H3B, H3C3, H3FC HIST1H3C, H3C4, H3FB, HIST1H3D, H3C6, H3FD, HIST1H3E, H3C7, H3FI, HIST1H3F, H3C8, H3FH, HIST1H3G, H3C10, H3FK, HIST1H3H, H3C11, H3FF, HIST1H3I, H3C12, H3FJ, HIST1H3J ; ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP KDM5A_HUMAN P29375 ? 1 SVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEE 287 2 UNP H31_HUMAN P68431 ? 2 ARTKQTARKS 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7KLR A 2 ? 59 ? P29375 287 ? 344 ? 2 59 2 2 7KLR B 1 ? 10 ? P68431 2 ? 11 ? 1 10 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7KLR _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P29375 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 3 CBCACONH 1 isotropic 2 1 3 CBCANH 1 isotropic 3 1 2 '3D (H)CCCONH-TOCSY' 1 isotropic 4 1 2 '3D H(CC)(CO)NH-TOCSY' 1 isotropic 5 1 2 '3D HCCH-TOCSY' 1 isotropic 10 1 2 '3D NOESY' 1 isotropic 9 1 2 'N HSQC' 1 isotropic 8 1 2 'C HSQC' 1 isotropic 7 1 2 '3D filtered intermolecular NOESY' 1 isotropic 6 1 4 '2D intra-peptide TOCSY' 1 isotropic 11 1 4 '2D intra-peptide NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label Standard_conditions _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 2 ;900 uM [U-13C; U-15N] Histone lysine demethylase 5A, KDM5A, 4000 uM Histone H3.1, 50 mM HEPES, 150 mM sodium chloride, 5 mM beta-mercaptoethanol, 0.1 mM ZnCl2, 95% H2O/5% D2O ; '95% H2O/5% D2O' 3D_structure_sample solution ? 3 ;550 uM [U-13C; U-15N] Histone lysine demethylase 5A, KDM5A, 800 uM Histone H3.1, 50 mM HEPES, 150 mM sodium chloride, 5 mM beta-mercaptoethanol, 0.1 mM ZnCl2, 95% H2O/5% D2O ; '95% H2O/5% D2O' 3D_assignment_sample solution ? 4 ;1250 uM [U-13C; U-15N] Histone lysine demethylase 5A, KDM5A, 400 uM Histone H3.1, 50 mM HEPES, 150 mM sodium chloride, 5 mM beta-mercaptoethanol, 0.1 mM ZnCl2, 95% H2O/5% D2O ; '95% H2O/5% D2O' H3_sample solution ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 7KLR _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 7KLR _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7KLR _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria medoid # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement ARIA 2.3.2 ;Linge, O'Donoghue and Nilges ; 2 'structure calculation' ARIA 2.3.2 ;Linge, O'Donoghue and Nilges ; 3 'chemical shift assignment' 'CcpNmr Analysis' 2.4.2 CCPN 4 'peak picking' 'CcpNmr Analysis' 2.4.2 CCPN # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7KLR _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7KLR _struct.title 'Solution structure of the PHD1 domain of histone demethylase KDM5A in complex with a histone H3(1-10) peptide' _struct.pdbx_descriptor 'Lysine-specific demethylase 5A (E.C.1.14.11.67), Histone H3.1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7KLR _struct_keywords.text 'PHD, H3, Epigenetics, KDM5A, GENE REGULATION' _struct_keywords.pdbx_keywords 'GENE REGULATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 2 ? VAL A 6 ? SER A 2 VAL A 6 5 ? 5 HELX_P HELX_P2 AA2 ASN A 19 ? ASP A 21 ? ASN A 19 ASP A 21 5 ? 3 HELX_P HELX_P3 AA3 CYS A 52 ? ALA A 57 ? CYS A 52 ALA A 57 1 ? 6 HELX_P HELX_P4 AA4 THR B 3 ? ARG B 8 ? THR B 3 ARG B 8 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 11 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 11 A ZN 401 1_555 ? ? ? ? ? ? ? 2.301 ? ? metalc2 metalc ? ? A CYS 14 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 14 A ZN 401 1_555 ? ? ? ? ? ? ? 2.301 ? ? metalc3 metalc ? ? A CYS 26 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 26 A ZN 402 1_555 ? ? ? ? ? ? ? 2.299 ? ? metalc4 metalc ? ? A CYS 29 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 29 A ZN 402 1_555 ? ? ? ? ? ? ? 2.299 ? ? metalc5 metalc ? ? A HIS 34 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 34 A ZN 401 1_555 ? ? ? ? ? ? ? 1.999 ? ? metalc6 metalc ? ? A CYS 37 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 37 A ZN 401 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc7 metalc ? ? A CYS 52 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 52 A ZN 402 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc8 metalc ? ? A CYS 55 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 55 A ZN 402 1_555 ? ? ? ? ? ? ? 2.298 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 23 ? LEU A 24 ? LEU A 23 LEU A 24 AA1 2 TYR A 33 ? HIS A 34 ? TYR A 33 HIS A 34 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LEU _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 24 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 24 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id TYR _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 33 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id TYR _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 33 # _atom_sites.entry_id 7KLR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 287 SER SER A . n A 1 3 VAL 3 3 288 VAL VAL A . n A 1 4 ASN 4 4 289 ASN ASN A . n A 1 5 PHE 5 5 290 PHE PHE A . n A 1 6 VAL 6 6 291 VAL VAL A . n A 1 7 ASP 7 7 292 ASP ASP A . n A 1 8 LEU 8 8 293 LEU LEU A . n A 1 9 TYR 9 9 294 TYR TYR A . n A 1 10 VAL 10 10 295 VAL VAL A . n A 1 11 CYS 11 11 296 CYS CYS A . n A 1 12 MET 12 12 297 MET MET A . n A 1 13 PHE 13 13 298 PHE PHE A . n A 1 14 CYS 14 14 299 CYS CYS A . n A 1 15 GLY 15 15 300 GLY GLY A . n A 1 16 ARG 16 16 301 ARG ARG A . n A 1 17 GLY 17 17 302 GLY GLY A . n A 1 18 ASN 18 18 303 ASN ASN A . n A 1 19 ASN 19 19 304 ASN ASN A . n A 1 20 GLU 20 20 305 GLU GLU A . n A 1 21 ASP 21 21 306 ASP ASP A . n A 1 22 LYS 22 22 307 LYS LYS A . n A 1 23 LEU 23 23 308 LEU LEU A . n A 1 24 LEU 24 24 309 LEU LEU A . n A 1 25 LEU 25 25 310 LEU LEU A . n A 1 26 CYS 26 26 311 CYS CYS A . n A 1 27 ASP 27 27 312 ASP ASP A . n A 1 28 GLY 28 28 313 GLY GLY A . n A 1 29 CYS 29 29 314 CYS CYS A . n A 1 30 ASP 30 30 315 ASP ASP A . n A 1 31 ASP 31 31 316 ASP ASP A . n A 1 32 SER 32 32 317 SER SER A . n A 1 33 TYR 33 33 318 TYR TYR A . n A 1 34 HIS 34 34 319 HIS HIS A . n A 1 35 THR 35 35 320 THR THR A . n A 1 36 PHE 36 36 321 PHE PHE A . n A 1 37 CYS 37 37 322 CYS CYS A . n A 1 38 LEU 38 38 323 LEU LEU A . n A 1 39 ILE 39 39 324 ILE ILE A . n A 1 40 PRO 40 40 325 PRO PRO A . n A 1 41 PRO 41 41 326 PRO PRO A . n A 1 42 LEU 42 42 327 LEU LEU A . n A 1 43 PRO 43 43 328 PRO PRO A . n A 1 44 ASP 44 44 329 ASP ASP A . n A 1 45 VAL 45 45 330 VAL VAL A . n A 1 46 PRO 46 46 331 PRO PRO A . n A 1 47 LYS 47 47 332 LYS LYS A . n A 1 48 GLY 48 48 333 GLY GLY A . n A 1 49 ASP 49 49 334 ASP ASP A . n A 1 50 TRP 50 50 335 TRP TRP A . n A 1 51 ARG 51 51 336 ARG ARG A . n A 1 52 CYS 52 52 337 CYS CYS A . n A 1 53 PRO 53 53 338 PRO PRO A . n A 1 54 LYS 54 54 339 LYS LYS A . n A 1 55 CYS 55 55 340 CYS CYS A . n A 1 56 VAL 56 56 341 VAL VAL A . n A 1 57 ALA 57 57 342 ALA ALA A . n A 1 58 GLU 58 58 343 GLU GLU A . n A 1 59 GLU 59 59 344 GLU GLU A . n B 2 1 ALA 1 1 1 ALA ALA B . n B 2 2 ARG 2 2 2 ARG ARG B . n B 2 3 THR 3 3 3 THR THR B . n B 2 4 LYS 4 4 4 LYS LYS B . n B 2 5 GLN 5 5 5 GLN GLN B . n B 2 6 THR 6 6 6 THR THR B . n B 2 7 ALA 7 7 7 ALA ALA B . n B 2 8 ARG 8 8 8 ARG ARG B . n B 2 9 LYS 9 9 9 LYS LYS B . n B 2 10 SER 10 10 10 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 401 1 ZN ZN A . D 3 ZN 1 402 1 ZN ZN A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 920 ? 1 MORE -4 ? 1 'SSA (A^2)' 5170 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 11 ? A CYS 11 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 14 ? A CYS 14 ? 1_555 109.2 ? 2 SG ? A CYS 11 ? A CYS 11 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 ND1 ? A HIS 34 ? A HIS 34 ? 1_555 109.2 ? 3 SG ? A CYS 14 ? A CYS 14 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 ND1 ? A HIS 34 ? A HIS 34 ? 1_555 106.4 ? 4 SG ? A CYS 11 ? A CYS 11 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 37 ? A CYS 37 ? 1_555 112.4 ? 5 SG ? A CYS 14 ? A CYS 14 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 37 ? A CYS 37 ? 1_555 109.9 ? 6 ND1 ? A HIS 34 ? A HIS 34 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 37 ? A CYS 37 ? 1_555 109.6 ? 7 SG ? A CYS 26 ? A CYS 26 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 SG ? A CYS 29 ? A CYS 29 ? 1_555 108.9 ? 8 SG ? A CYS 26 ? A CYS 26 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 SG ? A CYS 52 ? A CYS 52 ? 1_555 110.0 ? 9 SG ? A CYS 29 ? A CYS 29 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 SG ? A CYS 52 ? A CYS 52 ? 1_555 106.1 ? 10 SG ? A CYS 26 ? A CYS 26 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 SG ? A CYS 55 ? A CYS 55 ? 1_555 108.1 ? 11 SG ? A CYS 29 ? A CYS 29 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 SG ? A CYS 55 ? A CYS 55 ? 1_555 116.8 ? 12 SG ? A CYS 52 ? A CYS 52 ? 1_555 ZN ? D ZN . ? A ZN 402 ? 1_555 SG ? A CYS 55 ? A CYS 55 ? 1_555 106.9 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2021-03-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_entry_details.entry_id 7KLR _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 2 'Histone lysine demethylase 5A, KDM5A' 900 ? uM '[U-13C; U-15N]' 2 'Histone H3.1' 4000 ? uM 'natural abundance' 2 HEPES 50 ? mM 'natural abundance' 2 'sodium chloride' 150 ? mM 'natural abundance' 2 beta-mercaptoethanol 5 ? mM 'natural abundance' 2 ZnCl2 0.1 ? mM 'natural abundance' 3 'Histone lysine demethylase 5A, KDM5A' 550 ? uM '[U-13C; U-15N]' 3 'Histone H3.1' 800 ? uM 'natural abundance' 3 HEPES 50 ? mM 'natural abundance' 3 'sodium chloride' 150 ? mM 'natural abundance' 3 beta-mercaptoethanol 5 ? mM 'natural abundance' 3 ZnCl2 0.1 ? mM 'natural abundance' 4 'Histone lysine demethylase 5A, KDM5A' 1250 ? uM '[U-13C; U-15N]' 4 'Histone H3.1' 400 ? uM 'natural abundance' 4 HEPES 50 ? mM 'natural abundance' 4 'sodium chloride' 150 ? mM 'natural abundance' 4 beta-mercaptoethanol 5 ? mM 'natural abundance' 4 ZnCl2 0.1 ? mM 'natural abundance' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 11 ? ? -43.08 151.61 2 1 PHE A 13 ? ? 71.75 -59.59 3 1 ASN A 18 ? ? -110.18 -149.08 4 1 ASN A 19 ? ? -44.57 3.41 5 1 GLU A 20 ? ? -34.35 -21.56 6 1 ASP A 27 ? ? -38.50 103.10 7 1 ASP A 30 ? ? -45.71 27.68 8 1 SER A 32 ? ? -173.69 142.59 9 1 TYR A 33 ? ? -162.72 112.45 10 1 LEU A 38 ? ? -169.27 99.26 11 1 PRO A 40 ? ? -54.80 -178.98 12 2 PHE A 5 ? ? -91.88 37.93 13 2 PHE A 13 ? ? 70.88 -66.38 14 2 ASN A 18 ? ? -110.00 -148.85 15 2 ASN A 19 ? ? -50.85 2.62 16 2 GLU A 20 ? ? -43.38 -3.36 17 2 CYS A 29 ? ? -120.51 -60.81 18 2 ASP A 30 ? ? -77.11 29.47 19 2 ASP A 31 ? ? -44.40 9.49 20 2 SER A 32 ? ? -162.71 114.59 21 2 THR A 35 ? ? -48.48 -19.06 22 2 CYS A 37 ? ? -76.95 -71.41 23 2 PRO A 40 ? ? -41.94 176.56 24 3 PHE A 5 ? ? -98.02 33.48 25 3 PHE A 13 ? ? 70.08 -68.37 26 3 ASN A 18 ? ? -110.31 -148.65 27 3 ASN A 19 ? ? -48.84 2.17 28 3 GLU A 20 ? ? -43.08 -14.36 29 3 ASP A 30 ? ? -44.43 -1.63 30 3 ASP A 31 ? ? -74.34 34.94 31 3 PRO A 40 ? ? -46.15 178.83 32 3 ARG B 2 ? ? 66.11 144.25 33 4 PHE A 13 ? ? 74.58 -34.68 34 4 ASN A 18 ? ? -110.24 -148.61 35 4 ASN A 19 ? ? -45.51 3.56 36 4 GLU A 20 ? ? -34.05 -20.46 37 4 CYS A 29 ? ? -120.57 -60.88 38 4 ASP A 30 ? ? -76.29 29.72 39 4 ASP A 31 ? ? -44.19 7.04 40 4 LEU A 38 ? ? -166.48 99.65 41 4 PRO A 40 ? ? -48.62 -178.89 42 4 PRO A 41 ? ? -67.70 2.74 43 4 GLU A 58 ? ? -101.33 75.47 44 5 VAL A 3 ? ? 43.96 26.63 45 5 PHE A 5 ? ? -141.39 24.74 46 5 CYS A 11 ? ? -46.14 152.99 47 5 PHE A 13 ? ? 73.79 -33.09 48 5 ASN A 18 ? ? -110.41 -150.56 49 5 ASN A 19 ? ? -50.61 2.96 50 5 GLU A 20 ? ? -42.78 -0.99 51 5 ASP A 27 ? ? -67.58 99.54 52 5 ASP A 30 ? ? -45.32 18.51 53 5 SER A 32 ? ? -173.74 143.13 54 5 TYR A 33 ? ? -163.81 116.07 55 5 LEU A 38 ? ? -166.21 98.88 56 5 PRO A 40 ? ? -53.77 -179.04 57 5 GLU A 58 ? ? -108.52 79.10 58 6 PHE A 13 ? ? 74.76 -33.55 59 6 ASN A 18 ? ? -107.00 -148.75 60 6 ASN A 19 ? ? -45.27 3.42 61 6 GLU A 20 ? ? -34.25 -17.03 62 6 CYS A 29 ? ? -120.63 -60.27 63 6 ASP A 30 ? ? -85.27 30.14 64 6 ASP A 31 ? ? -43.80 9.74 65 6 SER A 32 ? ? -160.83 111.53 66 6 CYS A 37 ? ? -69.64 -71.87 67 6 PRO A 40 ? ? -45.65 178.55 68 6 PRO A 41 ? ? -69.88 1.97 69 7 SER A 2 ? ? 59.24 94.10 70 7 PHE A 5 ? ? -93.88 51.98 71 7 PHE A 13 ? ? 76.02 -43.04 72 7 ASN A 18 ? ? -105.25 -148.24 73 7 ASN A 19 ? ? -42.62 2.54 74 7 GLU A 20 ? ? -34.38 -23.05 75 7 ASP A 27 ? ? -41.82 99.93 76 7 ASP A 30 ? ? -45.12 27.63 77 7 SER A 32 ? ? -172.92 144.37 78 7 LEU A 38 ? ? -160.91 98.70 79 7 PRO A 40 ? ? -57.30 -178.50 80 7 GLU A 58 ? ? -87.69 49.86 81 8 PHE A 13 ? ? 59.60 -80.69 82 8 ASN A 18 ? ? -109.57 -148.61 83 8 ASN A 19 ? ? -45.74 2.88 84 8 GLU A 20 ? ? -34.44 -21.48 85 8 ASP A 30 ? ? -44.45 -2.30 86 8 ASP A 31 ? ? -69.22 35.88 87 8 CYS A 37 ? ? -77.37 -70.29 88 8 PRO A 40 ? ? -48.59 -179.28 89 8 ARG B 2 ? ? 60.67 98.20 90 9 PHE A 13 ? ? 72.68 -57.39 91 9 ASN A 18 ? ? -110.21 -148.23 92 9 ASN A 19 ? ? -47.73 2.47 93 9 GLU A 20 ? ? -40.47 -12.66 94 9 CYS A 29 ? ? -120.26 -60.67 95 9 ASP A 30 ? ? -78.04 29.66 96 9 ASP A 31 ? ? -44.17 3.08 97 9 SER A 32 ? ? -162.34 117.80 98 9 PRO A 40 ? ? -52.40 171.93 99 9 PRO A 43 ? ? -49.58 -171.55 100 9 VAL A 45 ? ? -36.35 111.79 101 10 PHE A 13 ? ? 67.48 -71.19 102 10 ASN A 18 ? ? -110.06 -148.35 103 10 ASN A 19 ? ? -43.78 2.80 104 10 GLU A 20 ? ? -34.45 -22.98 105 10 ASP A 30 ? ? -44.85 16.36 106 10 SER A 32 ? ? -172.72 135.48 107 10 LEU A 38 ? ? -166.81 98.80 108 10 PRO A 40 ? ? -51.22 -179.04 109 11 PHE A 5 ? ? -95.94 31.26 110 11 PHE A 13 ? ? 65.22 -77.09 111 11 ASN A 18 ? ? -110.11 -148.73 112 11 ASN A 19 ? ? -52.19 2.25 113 11 GLU A 20 ? ? -34.89 -21.21 114 11 ASP A 30 ? ? -43.67 -1.41 115 11 ASP A 31 ? ? -70.75 34.99 116 11 LEU A 38 ? ? -164.05 99.69 117 11 PRO A 40 ? ? -47.34 168.04 118 11 PRO A 41 ? ? -69.20 0.64 119 11 LEU A 42 ? ? -36.96 143.76 120 11 PRO A 43 ? ? -51.03 -171.37 121 11 VAL A 45 ? ? -36.22 107.95 122 11 GLU A 58 ? ? -161.31 116.36 123 12 PHE A 5 ? ? -85.05 47.38 124 12 MET A 12 ? ? -59.33 109.92 125 12 PHE A 13 ? ? 70.52 -65.36 126 12 ASN A 18 ? ? -105.38 -148.43 127 12 ASN A 19 ? ? -44.23 2.98 128 12 GLU A 20 ? ? -34.57 -17.00 129 12 ASP A 27 ? ? -65.49 99.68 130 12 ASP A 30 ? ? -45.80 26.90 131 12 SER A 32 ? ? -173.18 137.95 132 12 TYR A 33 ? ? -163.46 114.47 133 12 LEU A 38 ? ? -169.95 99.55 134 12 PRO A 40 ? ? -52.02 -178.61 135 12 ARG B 2 ? ? 65.74 143.06 136 12 ARG B 8 ? ? -64.18 -79.81 137 13 PHE A 13 ? ? 66.90 -74.09 138 13 ASN A 18 ? ? -110.03 -148.50 139 13 ASN A 19 ? ? -43.60 3.22 140 13 GLU A 20 ? ? -34.53 -14.63 141 13 ASP A 27 ? ? -61.34 99.73 142 13 ASP A 30 ? ? -44.75 14.75 143 13 TYR A 33 ? ? -168.58 119.27 144 13 PRO A 40 ? ? -49.50 -179.15 145 14 SER A 2 ? ? 64.38 127.08 146 14 PHE A 13 ? ? 63.64 -77.72 147 14 ASN A 18 ? ? -110.27 -148.55 148 14 ASN A 19 ? ? -48.31 3.10 149 14 GLU A 20 ? ? -34.19 -27.93 150 14 ASP A 30 ? ? -44.71 -0.62 151 14 ASP A 31 ? ? -75.16 36.05 152 14 PRO A 40 ? ? -48.28 -179.25 153 14 ASP A 49 ? ? -59.60 106.89 154 14 GLU A 58 ? ? -109.10 75.50 155 15 VAL A 3 ? ? 72.19 -24.68 156 15 CYS A 11 ? ? -48.86 153.41 157 15 PHE A 13 ? ? 76.01 -42.36 158 15 ASN A 18 ? ? -100.55 -148.55 159 15 ASN A 19 ? ? -47.51 2.43 160 15 GLU A 20 ? ? -43.64 -5.85 161 15 ASP A 27 ? ? -66.19 99.58 162 15 ASP A 30 ? ? -45.74 17.92 163 15 SER A 32 ? ? -174.17 130.93 164 15 LEU A 38 ? ? -161.08 98.49 165 15 PRO A 40 ? ? -51.53 -178.87 166 15 ARG B 2 ? ? 66.19 139.81 167 16 MET A 12 ? ? -57.05 109.68 168 16 PHE A 13 ? ? 69.69 -62.09 169 16 ASN A 18 ? ? -110.15 -147.88 170 16 ASN A 19 ? ? -39.20 2.58 171 16 GLU A 20 ? ? -34.64 -23.26 172 16 CYS A 29 ? ? -120.49 -60.58 173 16 ASP A 30 ? ? -75.01 29.18 174 16 ASP A 31 ? ? -44.61 6.41 175 16 SER A 32 ? ? -164.52 119.67 176 16 LEU A 38 ? ? -163.22 101.38 177 16 PRO A 40 ? ? -41.00 174.50 178 16 GLU A 58 ? ? -101.99 63.58 179 17 PHE A 13 ? ? 74.38 -28.35 180 17 ASN A 18 ? ? -110.13 -148.47 181 17 ASN A 19 ? ? -42.87 3.23 182 17 GLU A 20 ? ? -34.62 -20.11 183 17 ASP A 27 ? ? -40.09 99.96 184 17 ASP A 30 ? ? -45.27 27.70 185 17 SER A 32 ? ? -173.52 149.74 186 17 LEU A 38 ? ? -160.84 98.00 187 17 PRO A 40 ? ? -48.87 -178.86 188 18 VAL A 3 ? ? 44.68 25.74 189 18 PHE A 13 ? ? 77.02 -49.61 190 18 ASN A 18 ? ? -110.24 -153.40 191 18 ASN A 19 ? ? -51.45 2.80 192 18 GLU A 20 ? ? -39.65 -1.00 193 18 ASP A 27 ? ? -53.40 99.61 194 18 ASP A 30 ? ? -45.40 26.85 195 18 TYR A 33 ? ? -166.75 114.65 196 18 LEU A 38 ? ? -178.11 124.21 197 18 PRO A 40 ? ? -50.49 -178.51 198 19 PHE A 13 ? ? 77.36 -48.34 199 19 ASN A 18 ? ? -104.84 -151.49 200 19 ASN A 19 ? ? -49.09 2.96 201 19 GLU A 20 ? ? -34.47 -22.91 202 19 ASP A 30 ? ? -44.41 -1.48 203 19 ASP A 31 ? ? -69.27 35.96 204 19 PRO A 40 ? ? -48.02 -179.19 205 20 PHE A 13 ? ? 72.48 -62.80 206 20 ASN A 18 ? ? -105.16 -148.59 207 20 ASN A 19 ? ? -44.61 2.63 208 20 GLU A 20 ? ? -34.85 -19.67 209 20 ASP A 27 ? ? -60.75 98.41 210 20 ASP A 30 ? ? -103.04 -66.39 211 20 ASP A 31 ? ? -126.17 -54.13 212 20 SER A 32 ? ? -172.83 -179.28 213 20 LEU A 38 ? ? -160.85 98.76 214 20 PRO A 40 ? ? -51.95 -178.71 215 20 PRO A 41 ? ? -68.69 1.15 216 20 GLU A 58 ? ? -160.47 47.06 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM114044 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM114044-03S1 2 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #