data_7KNV # _entry.id 7KNV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7KNV pdb_00007knv 10.2210/pdb7knv/pdb WWPDB D_1000251771 ? ? BMRB 30812 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR structure of CDHR3 extracellular domain EC1' _pdbx_database_related.db_id 30812 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7KNV _pdbx_database_status.recvd_initial_deposition_date 2020-11-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lee, W.' 1 0000-0002-0964-203X 'Tonelli, M.' 2 0000-0002-7700-5745 'Frederick, R.O.' 3 0000-0002-4936-7968 'Watters, K.E.' 4 0000-0002-6886-8960 'Markley, J.L.' 5 0000-0003-1799-6134 'Palmenberg, A.C.' 6 0000-0002-9682-8480 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CH _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Viruses _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1999-4915 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 159 _citation.page_last ? _citation.title 'Solution NMR Determination of the CDHR3 Rhinovirus-C Binding Domain, EC1' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.3390/v13020159 _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lee, W.' 1 0000-0002-0964-203X primary 'Frederick, R.O.' 2 0000-0002-4936-7968 primary 'Tonelli, M.' 3 0000-0002-7700-5745 primary 'Palmenberg, A.C.' 4 0000-0002-9682-8480 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cadherin-related family member 3' 13688.275 1 ? ? 'Extracellular domain EC1, residues 21-130' ? 2 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cadherin-like protein 28' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASDYKDDDDKLHLILLPATGNVAENSPPGTSVHKFSVKLSASLSPVIPGFPQIVNSNPLTEAFRVNWLSGTYFEVVTTG MEQLDFETGPNIFDLQIYVKDEVGVTDLQVLTVQVTDVNEPPGGTK ; _entity_poly.pdbx_seq_one_letter_code_can ;MASDYKDDDDKLHLILLPATGNVAENSPPGTSVHKFSVKLSASLSPVIPGFPQIVNSNPLTEAFRVNWLSGTYFEVVTTG MEQLDFETGPNIFDLQIYVKDEVGVTDLQVLTVQVTDVNEPPGGTK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 ASP n 1 5 TYR n 1 6 LYS n 1 7 ASP n 1 8 ASP n 1 9 ASP n 1 10 ASP n 1 11 LYS n 1 12 LEU n 1 13 HIS n 1 14 LEU n 1 15 ILE n 1 16 LEU n 1 17 LEU n 1 18 PRO n 1 19 ALA n 1 20 THR n 1 21 GLY n 1 22 ASN n 1 23 VAL n 1 24 ALA n 1 25 GLU n 1 26 ASN n 1 27 SER n 1 28 PRO n 1 29 PRO n 1 30 GLY n 1 31 THR n 1 32 SER n 1 33 VAL n 1 34 HIS n 1 35 LYS n 1 36 PHE n 1 37 SER n 1 38 VAL n 1 39 LYS n 1 40 LEU n 1 41 SER n 1 42 ALA n 1 43 SER n 1 44 LEU n 1 45 SER n 1 46 PRO n 1 47 VAL n 1 48 ILE n 1 49 PRO n 1 50 GLY n 1 51 PHE n 1 52 PRO n 1 53 GLN n 1 54 ILE n 1 55 VAL n 1 56 ASN n 1 57 SER n 1 58 ASN n 1 59 PRO n 1 60 LEU n 1 61 THR n 1 62 GLU n 1 63 ALA n 1 64 PHE n 1 65 ARG n 1 66 VAL n 1 67 ASN n 1 68 TRP n 1 69 LEU n 1 70 SER n 1 71 GLY n 1 72 THR n 1 73 TYR n 1 74 PHE n 1 75 GLU n 1 76 VAL n 1 77 VAL n 1 78 THR n 1 79 THR n 1 80 GLY n 1 81 MET n 1 82 GLU n 1 83 GLN n 1 84 LEU n 1 85 ASP n 1 86 PHE n 1 87 GLU n 1 88 THR n 1 89 GLY n 1 90 PRO n 1 91 ASN n 1 92 ILE n 1 93 PHE n 1 94 ASP n 1 95 LEU n 1 96 GLN n 1 97 ILE n 1 98 TYR n 1 99 VAL n 1 100 LYS n 1 101 ASP n 1 102 GLU n 1 103 VAL n 1 104 GLY n 1 105 VAL n 1 106 THR n 1 107 ASP n 1 108 LEU n 1 109 GLN n 1 110 VAL n 1 111 LEU n 1 112 THR n 1 113 VAL n 1 114 GLN n 1 115 VAL n 1 116 THR n 1 117 ASP n 1 118 VAL n 1 119 ASN n 1 120 GLU n 1 121 PRO n 1 122 PRO n 1 123 GLY n 1 124 GLY n 1 125 THR n 1 126 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 126 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CDHR3, CDH28' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CDHR3_HUMAN _struct_ref.pdbx_db_accession Q6ZTQ4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;HLILLPATGNVAENSPPGTSVHKFSVKLSASLSPVIPGFPQIVNSNPLTEAFRVNWLSGTYFEVVTTGMEQLDFETGPNI FDLQIYVKDEVGVTDLQVLTVQVTDVNEPP ; _struct_ref.pdbx_align_begin 21 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7KNV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 122 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6ZTQ4 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 130 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 21 _struct_ref_seq.pdbx_auth_seq_align_end 130 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7KNV MET A 1 ? UNP Q6ZTQ4 ? ? 'initiating methionine' 9 1 1 7KNV ALA A 2 ? UNP Q6ZTQ4 ? ? 'expression tag' 10 2 1 7KNV SER A 3 ? UNP Q6ZTQ4 ? ? 'expression tag' 11 3 1 7KNV ASP A 4 ? UNP Q6ZTQ4 ? ? 'expression tag' 12 4 1 7KNV TYR A 5 ? UNP Q6ZTQ4 ? ? 'expression tag' 13 5 1 7KNV LYS A 6 ? UNP Q6ZTQ4 ? ? 'expression tag' 14 6 1 7KNV ASP A 7 ? UNP Q6ZTQ4 ? ? 'expression tag' 15 7 1 7KNV ASP A 8 ? UNP Q6ZTQ4 ? ? 'expression tag' 16 8 1 7KNV ASP A 9 ? UNP Q6ZTQ4 ? ? 'expression tag' 17 9 1 7KNV ASP A 10 ? UNP Q6ZTQ4 ? ? 'expression tag' 18 10 1 7KNV LYS A 11 ? UNP Q6ZTQ4 ? ? 'expression tag' 19 11 1 7KNV LEU A 12 ? UNP Q6ZTQ4 ? ? 'expression tag' 20 12 1 7KNV GLY A 123 ? UNP Q6ZTQ4 ? ? 'expression tag' 131 13 1 7KNV GLY A 124 ? UNP Q6ZTQ4 ? ? 'expression tag' 132 14 1 7KNV THR A 125 ? UNP Q6ZTQ4 ? ? 'expression tag' 133 15 1 7KNV LYS A 126 ? UNP Q6ZTQ4 ? ? 'expression tag' 134 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 14 1 1 '2D 1H-15N HSQC' 1 isotropic 1 1 1 '3D HNCACB' 1 isotropic 2 1 1 '3D CBCA(CO)NH' 1 isotropic 3 1 1 '3D HNCA' 1 isotropic 4 1 1 '3D HN(CO)CA' 1 isotropic 5 1 1 '3D HN(CA)CO' 2 isotropic 6 1 1 '3D HNCO' 2 isotropic 7 1 1 '3D HBHA(CO)NH' 2 isotropic 8 1 1 '3D HCCH-TOCSY' 2 isotropic 9 1 1 '3D HCCH-TOCSY' 3 isotropic 10 1 1 '3D HCCH-COSY' 3 isotropic 11 1 1 '3D NOESY 1H-15N HSQC' 2 isotropic 12 1 1 '3D NOESY 1H-13C HSQC aliphatic' 2 isotropic 13 1 1 '2D 1H-13C HSQC aliphatic' 3 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 380 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;0.4 mM [U-100% 13C; U-100% 15N] CDHR3 extracellular domain EC1, 50 mM HEPES, 300 mM potassium chloride, 10 mM calcium chloride, 0.05 % w/v sodium azide, 10 % v/v [U-100% 2H] D2O, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 13C_15N_sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III' ? Bruker 600 ? 2 VNMR ? Varian 600 ? 3 VNMR ? Varian 800 ? # loop_ _pdbx_nmr_refine.entry_id _pdbx_nmr_refine.method _pdbx_nmr_refine.details _pdbx_nmr_refine.software_ordinal 7KNV 'simulated annealing' ? 5 7KNV 'simulated annealing' ? 6 # _pdbx_nmr_ensemble.entry_id 7KNV _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7KNV _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin ? 'Bruker Biospin' 2 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 3 'peak picking' NMRFAM-SPARKY ? 'Lee, Tonelli, Markley' 4 'chemical shift assignment' I-PINE ? 'Lee, Bahrami, Dashti, Eghbalnia, Tonelli, Westler and Markley' 5 'structure calculation' PONDEROSA-C/S ? 'Lee, Petit, Cornilescu, Stark and Markley' 6 refinement 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7KNV _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7KNV _struct.title 'Solution NMR structure of CDHR3 extracellular domain EC1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7KNV _struct_keywords.text 'receptor, CELL ADHESION' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 85 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 89 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 93 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 97 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 25 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 33 A CA 201 1_555 ? ? ? ? ? ? ? 2.294 ? ? metalc2 metalc ? ? A GLU 87 OE2 ? ? ? 1_555 B CA . CA ? ? A GLU 95 A CA 201 1_555 ? ? ? ? ? ? ? 2.586 ? ? metalc3 metalc ? ? A GLU 87 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 95 A CA 202 1_555 ? ? ? ? ? ? ? 3.143 ? ? metalc4 metalc ? ? A GLU 87 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 95 A CA 202 1_555 ? ? ? ? ? ? ? 2.807 ? ? metalc5 metalc ? ? A ASP 117 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 125 A CA 201 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc6 metalc ? ? A ASP 117 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 125 A CA 201 1_555 ? ? ? ? ? ? ? 2.898 ? ? metalc7 metalc ? ? A VAL 118 O ? ? ? 1_555 D CA . CA ? ? A VAL 126 A CA 203 1_555 ? ? ? ? ? ? ? 3.137 ? ? metalc8 metalc ? ? A ASN 119 OD1 ? ? ? 1_555 D CA . CA ? ? A ASN 127 A CA 203 1_555 ? ? ? ? ? ? ? 2.889 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 1 -1.87 2 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 1 -0.97 3 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 1 -0.60 4 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 2 -0.67 5 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 2 -2.18 6 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 2 -0.87 7 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 3 -1.48 8 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 3 -1.66 9 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 3 -0.97 10 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 4 -2.43 11 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 4 -0.96 12 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 4 -0.17 13 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 5 -1.78 14 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 5 -1.07 15 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 5 -0.16 16 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 6 -2.21 17 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 6 -0.44 18 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 6 -1.27 19 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 7 -1.91 20 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 7 -1.01 21 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 7 -0.28 22 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 8 -1.84 23 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 8 -1.11 24 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 8 0.19 25 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 9 -1.61 26 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 9 -1.74 27 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 9 0.09 28 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 10 -2.22 29 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 10 0.44 30 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 10 -0.54 31 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 11 -2.44 32 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 11 -0.08 33 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 11 -0.37 34 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 12 -2.88 35 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 12 -1.28 36 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 12 -0.98 37 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 13 -1.66 38 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 13 -1.66 39 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 13 -1.12 40 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 14 -1.85 41 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 14 -0.23 42 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 14 -1.07 43 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 15 -1.66 44 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 15 -1.29 45 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 15 0.04 46 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 16 -2.09 47 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 16 -1.23 48 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 16 -0.73 49 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 17 -2.13 50 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 17 -1.39 51 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 17 0.18 52 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 18 -2.79 53 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 18 -1.13 54 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 18 -0.03 55 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 19 -1.50 56 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 19 -0.12 57 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 19 -0.22 58 PRO 18 A . ? PRO 26 A ALA 19 A ? ALA 27 A 20 -2.55 59 PRO 52 A . ? PRO 60 A GLN 53 A ? GLN 61 A 20 -1.03 60 PRO 59 A . ? PRO 67 A LEU 60 A ? LEU 68 A 20 -0.13 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 14 ? ILE A 15 ? LEU A 22 ILE A 23 AA1 2 SER A 32 ? VAL A 38 ? SER A 40 VAL A 46 AA1 3 TYR A 73 ? THR A 78 ? TYR A 81 THR A 86 AA1 4 PHE A 64 ? SER A 70 ? PHE A 72 SER A 78 AA2 1 THR A 20 ? VAL A 23 ? THR A 28 VAL A 31 AA2 2 THR A 106 ? VAL A 115 ? THR A 114 VAL A 123 AA2 3 ILE A 92 ? LYS A 100 ? ILE A 100 LYS A 108 AA2 4 ILE A 54 ? ASN A 56 ? ILE A 62 ASN A 64 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 15 ? N ILE A 23 O SER A 37 ? O SER A 45 AA1 2 3 N PHE A 36 ? N PHE A 44 O PHE A 74 ? O PHE A 82 AA1 3 4 O TYR A 73 ? O TYR A 81 N SER A 70 ? N SER A 78 AA2 1 2 N GLY A 21 ? N GLY A 29 O GLN A 114 ? O GLN A 122 AA2 2 3 O GLN A 109 ? O GLN A 117 N ILE A 97 ? N ILE A 105 AA2 3 4 O GLN A 96 ? O GLN A 104 N VAL A 55 ? N VAL A 63 # _atom_sites.entry_id 7KNV _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CA H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 9 9 MET MET A . n A 1 2 ALA 2 10 10 ALA ALA A . n A 1 3 SER 3 11 11 SER SER A . n A 1 4 ASP 4 12 12 ASP ASP A . n A 1 5 TYR 5 13 13 TYR TYR A . n A 1 6 LYS 6 14 14 LYS LYS A . n A 1 7 ASP 7 15 15 ASP ASP A . n A 1 8 ASP 8 16 16 ASP ASP A . n A 1 9 ASP 9 17 17 ASP ASP A . n A 1 10 ASP 10 18 18 ASP ASP A . n A 1 11 LYS 11 19 19 LYS LYS A . n A 1 12 LEU 12 20 20 LEU LEU A . n A 1 13 HIS 13 21 21 HIS HIS A . n A 1 14 LEU 14 22 22 LEU LEU A . n A 1 15 ILE 15 23 23 ILE ILE A . n A 1 16 LEU 16 24 24 LEU LEU A . n A 1 17 LEU 17 25 25 LEU LEU A . n A 1 18 PRO 18 26 26 PRO PRO A . n A 1 19 ALA 19 27 27 ALA ALA A . n A 1 20 THR 20 28 28 THR THR A . n A 1 21 GLY 21 29 29 GLY GLY A . n A 1 22 ASN 22 30 30 ASN ASN A . n A 1 23 VAL 23 31 31 VAL VAL A . n A 1 24 ALA 24 32 32 ALA ALA A . n A 1 25 GLU 25 33 33 GLU GLU A . n A 1 26 ASN 26 34 34 ASN ASN A . n A 1 27 SER 27 35 35 SER SER A . n A 1 28 PRO 28 36 36 PRO PRO A . n A 1 29 PRO 29 37 37 PRO PRO A . n A 1 30 GLY 30 38 38 GLY GLY A . n A 1 31 THR 31 39 39 THR THR A . n A 1 32 SER 32 40 40 SER SER A . n A 1 33 VAL 33 41 41 VAL VAL A . n A 1 34 HIS 34 42 42 HIS HIS A . n A 1 35 LYS 35 43 43 LYS LYS A . n A 1 36 PHE 36 44 44 PHE PHE A . n A 1 37 SER 37 45 45 SER SER A . n A 1 38 VAL 38 46 46 VAL VAL A . n A 1 39 LYS 39 47 47 LYS LYS A . n A 1 40 LEU 40 48 48 LEU LEU A . n A 1 41 SER 41 49 49 SER SER A . n A 1 42 ALA 42 50 50 ALA ALA A . n A 1 43 SER 43 51 51 SER SER A . n A 1 44 LEU 44 52 52 LEU LEU A . n A 1 45 SER 45 53 53 SER SER A . n A 1 46 PRO 46 54 54 PRO PRO A . n A 1 47 VAL 47 55 55 VAL VAL A . n A 1 48 ILE 48 56 56 ILE ILE A . n A 1 49 PRO 49 57 57 PRO PRO A . n A 1 50 GLY 50 58 58 GLY GLY A . n A 1 51 PHE 51 59 59 PHE PHE A . n A 1 52 PRO 52 60 60 PRO PRO A . n A 1 53 GLN 53 61 61 GLN GLN A . n A 1 54 ILE 54 62 62 ILE ILE A . n A 1 55 VAL 55 63 63 VAL VAL A . n A 1 56 ASN 56 64 64 ASN ASN A . n A 1 57 SER 57 65 65 SER SER A . n A 1 58 ASN 58 66 66 ASN ASN A . n A 1 59 PRO 59 67 67 PRO PRO A . n A 1 60 LEU 60 68 68 LEU LEU A . n A 1 61 THR 61 69 69 THR THR A . n A 1 62 GLU 62 70 70 GLU GLU A . n A 1 63 ALA 63 71 71 ALA ALA A . n A 1 64 PHE 64 72 72 PHE PHE A . n A 1 65 ARG 65 73 73 ARG ARG A . n A 1 66 VAL 66 74 74 VAL VAL A . n A 1 67 ASN 67 75 75 ASN ASN A . n A 1 68 TRP 68 76 76 TRP TRP A . n A 1 69 LEU 69 77 77 LEU LEU A . n A 1 70 SER 70 78 78 SER SER A . n A 1 71 GLY 71 79 79 GLY GLY A . n A 1 72 THR 72 80 80 THR THR A . n A 1 73 TYR 73 81 81 TYR TYR A . n A 1 74 PHE 74 82 82 PHE PHE A . n A 1 75 GLU 75 83 83 GLU GLU A . n A 1 76 VAL 76 84 84 VAL VAL A . n A 1 77 VAL 77 85 85 VAL VAL A . n A 1 78 THR 78 86 86 THR THR A . n A 1 79 THR 79 87 87 THR THR A . n A 1 80 GLY 80 88 88 GLY GLY A . n A 1 81 MET 81 89 89 MET MET A . n A 1 82 GLU 82 90 90 GLU GLU A . n A 1 83 GLN 83 91 91 GLN GLN A . n A 1 84 LEU 84 92 92 LEU LEU A . n A 1 85 ASP 85 93 93 ASP ASP A . n A 1 86 PHE 86 94 94 PHE PHE A . n A 1 87 GLU 87 95 95 GLU GLU A . n A 1 88 THR 88 96 96 THR THR A . n A 1 89 GLY 89 97 97 GLY GLY A . n A 1 90 PRO 90 98 98 PRO PRO A . n A 1 91 ASN 91 99 99 ASN ASN A . n A 1 92 ILE 92 100 100 ILE ILE A . n A 1 93 PHE 93 101 101 PHE PHE A . n A 1 94 ASP 94 102 102 ASP ASP A . n A 1 95 LEU 95 103 103 LEU LEU A . n A 1 96 GLN 96 104 104 GLN GLN A . n A 1 97 ILE 97 105 105 ILE ILE A . n A 1 98 TYR 98 106 106 TYR TYR A . n A 1 99 VAL 99 107 107 VAL VAL A . n A 1 100 LYS 100 108 108 LYS LYS A . n A 1 101 ASP 101 109 109 ASP ASP A . n A 1 102 GLU 102 110 110 GLU GLU A . n A 1 103 VAL 103 111 111 VAL VAL A . n A 1 104 GLY 104 112 112 GLY GLY A . n A 1 105 VAL 105 113 113 VAL VAL A . n A 1 106 THR 106 114 114 THR THR A . n A 1 107 ASP 107 115 115 ASP ASP A . n A 1 108 LEU 108 116 116 LEU LEU A . n A 1 109 GLN 109 117 117 GLN GLN A . n A 1 110 VAL 110 118 118 VAL VAL A . n A 1 111 LEU 111 119 119 LEU LEU A . n A 1 112 THR 112 120 120 THR THR A . n A 1 113 VAL 113 121 121 VAL VAL A . n A 1 114 GLN 114 122 122 GLN GLN A . n A 1 115 VAL 115 123 123 VAL VAL A . n A 1 116 THR 116 124 124 THR THR A . n A 1 117 ASP 117 125 125 ASP ASP A . n A 1 118 VAL 118 126 126 VAL VAL A . n A 1 119 ASN 119 127 127 ASN ASN A . n A 1 120 GLU 120 128 128 GLU GLU A . n A 1 121 PRO 121 129 129 PRO PRO A . n A 1 122 PRO 122 130 130 PRO PRO A . n A 1 123 GLY 123 131 131 GLY GLY A . n A 1 124 GLY 124 132 132 GLY GLY A . n A 1 125 THR 125 133 133 THR THR A . n A 1 126 LYS 126 134 134 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 201 135 CA CA2 A . C 2 CA 1 202 136 CA CA2 A . D 2 CA 1 203 137 CA CA2 A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 220 ? 1 MORE -24 ? 1 'SSA (A^2)' 8590 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 25 ? A GLU 33 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OE2 ? A GLU 87 ? A GLU 95 ? 1_555 120.0 ? 2 OE2 ? A GLU 25 ? A GLU 33 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD1 ? A ASP 117 ? A ASP 125 ? 1_555 84.5 ? 3 OE2 ? A GLU 87 ? A GLU 95 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD1 ? A ASP 117 ? A ASP 125 ? 1_555 123.8 ? 4 OE2 ? A GLU 25 ? A GLU 33 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 117 ? A ASP 125 ? 1_555 128.0 ? 5 OE2 ? A GLU 87 ? A GLU 95 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 117 ? A ASP 125 ? 1_555 105.1 ? 6 OD1 ? A ASP 117 ? A ASP 125 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 117 ? A ASP 125 ? 1_555 47.4 ? 7 OE1 ? A GLU 87 ? A GLU 95 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 OE2 ? A GLU 87 ? A GLU 95 ? 1_555 42.0 ? 8 O ? A VAL 118 ? A VAL 126 ? 1_555 CA ? D CA . ? A CA 203 ? 1_555 OD1 ? A ASN 119 ? A ASN 127 ? 1_555 98.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-02-03 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' database_2 3 2 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_database_2.pdbx_DOI' 3 2 'Structure model' '_database_2.pdbx_database_accession' 4 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' # _pdbx_entry_details.entry_id 7KNV _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'CDHR3 extracellular domain EC1' 0.4 ? mM '[U-100% 13C; U-100% 15N]' 1 HEPES 50 ? mM 'natural abundance' 1 'potassium chloride' 300 ? mM 'natural abundance' 1 'calcium chloride' 10 ? mM 'natural abundance' 1 'sodium azide' 0.05 ? '% w/v' 'natural abundance' 1 D2O 10 ? '% v/v' '[U-100% 2H]' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 10 ? ? -134.21 -45.99 2 1 LEU A 24 ? ? 83.81 92.43 3 1 GLU A 33 ? ? 51.03 -161.96 4 1 GLN A 61 ? ? -178.31 148.65 5 1 ALA A 71 ? ? 174.47 52.61 6 1 SER A 78 ? ? -178.26 146.16 7 1 THR A 87 ? ? 66.21 88.02 8 2 ASP A 15 ? ? -133.79 -55.52 9 2 LEU A 24 ? ? 84.98 92.47 10 2 GLU A 33 ? ? -62.03 -143.61 11 2 GLN A 61 ? ? -173.49 145.03 12 2 SER A 78 ? ? -171.38 147.12 13 3 LYS A 14 ? ? -151.72 22.79 14 3 LEU A 24 ? ? 87.10 92.51 15 3 GLU A 33 ? ? 48.76 -166.39 16 3 ASN A 99 ? ? -147.00 -51.04 17 4 LEU A 24 ? ? 86.48 92.99 18 4 ALA A 27 ? ? -170.93 127.19 19 4 GLU A 33 ? ? 52.93 -170.14 20 4 GLN A 61 ? ? -173.90 150.00 21 4 ALA A 71 ? ? 61.44 86.67 22 4 SER A 78 ? ? -170.06 147.24 23 5 LEU A 24 ? ? 88.22 92.62 24 5 ALA A 27 ? ? -170.17 120.33 25 5 GLU A 33 ? ? -60.44 -138.95 26 5 GLN A 61 ? ? -173.54 147.42 27 5 THR A 87 ? ? 76.23 86.27 28 5 THR A 133 ? ? 52.75 95.54 29 6 LEU A 24 ? ? 78.60 92.27 30 6 ALA A 27 ? ? -170.66 128.79 31 6 GLU A 33 ? ? 63.61 -164.06 32 6 SER A 78 ? ? -172.44 146.43 33 6 THR A 86 ? ? -69.42 72.81 34 7 ALA A 10 ? ? -169.65 -35.68 35 7 LYS A 14 ? ? 51.35 -87.60 36 7 ASP A 15 ? ? 48.75 16.31 37 7 LEU A 24 ? ? 85.53 92.12 38 7 ALA A 32 ? ? -105.42 70.12 39 7 GLU A 33 ? ? 57.11 -157.62 40 7 GLN A 61 ? ? -175.00 144.49 41 7 SER A 78 ? ? -170.05 147.02 42 7 THR A 87 ? ? 62.53 102.30 43 8 LYS A 14 ? ? -168.68 26.24 44 8 LEU A 24 ? ? 84.89 92.90 45 8 GLU A 33 ? ? 34.62 -145.97 46 8 GLN A 61 ? ? -174.61 149.15 47 8 ALA A 71 ? ? 65.33 70.18 48 8 LEU A 77 ? ? -91.98 -62.76 49 8 THR A 87 ? ? 100.02 98.42 50 9 LEU A 24 ? ? 84.02 92.20 51 9 GLU A 33 ? ? 54.68 -173.30 52 9 LEU A 52 ? ? 39.36 71.08 53 9 GLN A 61 ? ? -174.99 143.52 54 9 ALA A 71 ? ? 165.06 69.70 55 9 SER A 78 ? ? -178.12 146.29 56 9 THR A 87 ? ? 179.65 60.02 57 9 ASN A 99 ? ? -135.95 -41.88 58 10 ASP A 15 ? ? -157.12 27.64 59 10 LEU A 24 ? ? 82.67 91.70 60 10 ALA A 27 ? ? -170.65 132.24 61 10 ALA A 32 ? ? -90.29 57.31 62 10 GLU A 33 ? ? 67.23 -179.74 63 10 LEU A 52 ? ? 53.99 70.49 64 10 ALA A 71 ? ? 61.91 86.04 65 11 ALA A 10 ? ? -168.98 -45.62 66 11 ASP A 15 ? ? 61.12 69.36 67 11 LEU A 24 ? ? 78.53 91.39 68 11 GLU A 33 ? ? 52.61 -161.93 69 11 GLN A 61 ? ? -174.86 144.52 70 11 THR A 133 ? ? 48.96 95.37 71 12 LEU A 24 ? ? 80.12 92.15 72 12 ALA A 27 ? ? -170.90 144.03 73 12 GLU A 33 ? ? 63.06 -171.72 74 12 GLN A 61 ? ? -172.31 143.51 75 13 LYS A 14 ? ? -167.55 81.15 76 13 LEU A 24 ? ? 86.32 92.40 77 13 GLU A 33 ? ? 55.56 -173.00 78 13 THR A 87 ? ? 68.24 88.34 79 13 THR A 133 ? ? 71.53 -66.51 80 14 LYS A 14 ? ? 73.72 -66.24 81 14 ASP A 15 ? ? -61.02 91.09 82 14 LEU A 24 ? ? 88.59 90.94 83 14 LEU A 25 ? ? -50.13 107.05 84 14 GLU A 33 ? ? 46.06 -162.76 85 14 LEU A 52 ? ? 37.99 32.09 86 14 ALA A 71 ? ? 170.42 55.90 87 14 SER A 78 ? ? -170.03 146.44 88 14 THR A 87 ? ? 68.33 88.47 89 15 ALA A 10 ? ? -98.34 -60.48 90 15 LEU A 24 ? ? 80.58 91.47 91 15 GLU A 33 ? ? 59.86 -167.63 92 16 LEU A 24 ? ? 88.28 93.10 93 16 ALA A 27 ? ? -170.14 127.97 94 16 GLU A 33 ? ? 59.77 -171.69 95 16 GLN A 61 ? ? -177.61 149.26 96 16 SER A 78 ? ? -172.12 147.06 97 17 LEU A 24 ? ? 74.87 92.89 98 17 ALA A 32 ? ? -69.30 83.44 99 17 GLU A 33 ? ? 46.82 -166.63 100 17 GLN A 61 ? ? 179.72 149.73 101 17 ALA A 71 ? ? 73.32 95.50 102 17 SER A 78 ? ? -177.54 145.75 103 18 LYS A 14 ? ? -152.15 9.32 104 18 LEU A 24 ? ? 88.16 92.99 105 18 ALA A 27 ? ? -171.15 140.19 106 18 GLU A 33 ? ? -58.21 -118.68 107 18 GLN A 61 ? ? -174.91 148.43 108 18 ALA A 71 ? ? 57.46 81.13 109 18 SER A 78 ? ? -178.24 146.56 110 18 THR A 87 ? ? 73.30 86.41 111 18 THR A 133 ? ? 50.37 135.81 112 19 LEU A 24 ? ? 80.13 92.77 113 19 ALA A 27 ? ? -170.70 122.10 114 19 GLU A 33 ? ? 55.90 -161.25 115 19 GLN A 61 ? ? -176.17 141.73 116 19 ALA A 71 ? ? 50.15 87.97 117 19 THR A 87 ? ? 76.28 88.59 118 19 THR A 133 ? ? -157.90 56.82 119 20 LEU A 24 ? ? 71.26 92.36 120 20 ALA A 27 ? ? -170.79 141.15 121 20 GLU A 33 ? ? 51.64 -161.11 122 20 THR A 87 ? ? 82.23 80.53 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' P41GM103399 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' U19-AI070503 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id CA _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id CA _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'CALCIUM ION' _pdbx_entity_nonpoly.comp_id CA # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #