HEADER LIGASE 18-NOV-20 7KQZ TITLE CRYSTAL STRUCTURE OF ACETYL-COA SYNTHETASE IN COMPLEX WITH ADENOSINE- TITLE 2 5'-ETHYLPHOSPHATE FROM COCCIDIOIDES IMMITIS RS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYL-COENZYME A SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: COIMA.00629.A.FS11; COMPND 5 EC: 6.2.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COCCIDIOIDES IMMITIS (STRAIN RS); SOURCE 3 ORGANISM_COMMON: VALLEY FEVER FUNGUS; SOURCE 4 ORGANISM_TAXID: 246410; SOURCE 5 STRAIN: RS; SOURCE 6 GENE: CIMG_01510; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: COIMA.00629.A.FS11 KEYWDS SSGCID, ACETYL-COENZYME A SYNTHETASE, ETHYL-AMP, STRUCTURAL GENOMICS, KEYWDS 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 18-OCT-23 7KQZ 1 REMARK REVDAT 2 30-DEC-20 7KQZ 1 AUTHOR JRNL REVDAT 1 16-DEC-20 7KQZ 0 JRNL AUTH D.FOX III,J.ABENDROTH,N.D.DEBOUVER,T.E.ESAN,T.J.HAGEN, JRNL AUTH 2 D.J.KRYSAN,D.D.LORIMER,P.S.HORANYI,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF ACETYL-COA SYNTHETASE IN COMPLEX WITH JRNL TITL 2 ADENOSINE-5'-ETHYLPHOSPHATE FROM COCCIDIOIDES IMMITIS RS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19RC4 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 41142 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.610 REMARK 3 FREE R VALUE TEST SET COUNT : 1896 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.2500 - 5.1800 1.00 2848 152 0.1699 0.1896 REMARK 3 2 5.1800 - 4.1100 1.00 2829 122 0.1360 0.1729 REMARK 3 3 4.1100 - 3.5900 1.00 2797 144 0.1388 0.1869 REMARK 3 4 3.5900 - 3.2600 1.00 2813 138 0.1670 0.2044 REMARK 3 5 3.2600 - 3.0300 1.00 2778 152 0.1692 0.2021 REMARK 3 6 3.0300 - 2.8500 1.00 2821 137 0.1838 0.2106 REMARK 3 7 2.8500 - 2.7100 1.00 2761 156 0.1725 0.2501 REMARK 3 8 2.7100 - 2.5900 1.00 2810 120 0.2018 0.2390 REMARK 3 9 2.5900 - 2.4900 1.00 2818 98 0.1789 0.2066 REMARK 3 10 2.4900 - 2.4100 1.00 2796 154 0.1838 0.2340 REMARK 3 11 2.4100 - 2.3300 1.00 2792 127 0.1746 0.2479 REMARK 3 12 2.3300 - 2.2600 1.00 2787 145 0.1957 0.2255 REMARK 3 13 2.2600 - 2.2000 1.00 2832 97 0.2124 0.2678 REMARK 3 14 2.2000 - 2.1500 1.00 2764 154 0.2266 0.2431 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.233 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.711 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4886 REMARK 3 ANGLE : 0.790 6662 REMARK 3 CHIRALITY : 0.055 723 REMARK 3 PLANARITY : 0.008 861 REMARK 3 DIHEDRAL : 13.199 1684 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 455 THROUGH 517 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9197 27.1646 1.7470 REMARK 3 T TENSOR REMARK 3 T11: 0.3120 T22: 0.2606 REMARK 3 T33: 0.4069 T12: -0.0435 REMARK 3 T13: -0.0097 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 1.8371 L22: 3.2965 REMARK 3 L33: 1.7278 L12: 0.2218 REMARK 3 L13: 0.1083 L23: -0.0183 REMARK 3 S TENSOR REMARK 3 S11: 0.1029 S12: -0.1955 S13: -0.6944 REMARK 3 S21: 0.1673 S22: -0.1021 S23: -0.2279 REMARK 3 S31: 0.4531 S32: -0.2206 S33: 0.0022 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 518 THROUGH 570 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5245 23.3869 -10.2557 REMARK 3 T TENSOR REMARK 3 T11: 0.7404 T22: 0.6500 REMARK 3 T33: 0.9454 T12: -0.0373 REMARK 3 T13: 0.0253 T23: -0.1821 REMARK 3 L TENSOR REMARK 3 L11: 1.2886 L22: 1.7262 REMARK 3 L33: 8.2369 L12: -0.4438 REMARK 3 L13: 0.7226 L23: -0.1282 REMARK 3 S TENSOR REMARK 3 S11: 0.2928 S12: 0.5350 S13: -0.9402 REMARK 3 S21: -0.6250 S22: 0.1216 S23: -0.6146 REMARK 3 S31: 0.4897 S32: 1.1445 S33: -0.6122 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 571 THROUGH 637 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5557 22.6124 -25.3194 REMARK 3 T TENSOR REMARK 3 T11: 1.2068 T22: 0.7991 REMARK 3 T33: 0.8920 T12: 0.1278 REMARK 3 T13: 0.0754 T23: -0.3571 REMARK 3 L TENSOR REMARK 3 L11: 4.4810 L22: 3.0190 REMARK 3 L33: 0.3898 L12: -2.1729 REMARK 3 L13: 0.0664 L23: -0.8851 REMARK 3 S TENSOR REMARK 3 S11: 0.2825 S12: 0.1924 S13: -0.6328 REMARK 3 S21: -0.1625 S22: 0.3708 S23: -1.0433 REMARK 3 S31: 0.5274 S32: 0.5500 S33: -0.2574 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0417 49.4922 -3.0933 REMARK 3 T TENSOR REMARK 3 T11: 0.2330 T22: 0.2295 REMARK 3 T33: 0.2611 T12: 0.0355 REMARK 3 T13: 0.0030 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 2.0924 L22: 2.3373 REMARK 3 L33: 1.1255 L12: 0.9398 REMARK 3 L13: -0.3543 L23: -0.0944 REMARK 3 S TENSOR REMARK 3 S11: -0.0044 S12: 0.0975 S13: -0.4376 REMARK 3 S21: -0.0107 S22: 0.0251 S23: -0.5264 REMARK 3 S31: 0.0744 S32: 0.0029 S33: -0.0633 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 271 THROUGH 454 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0865 38.1544 2.5502 REMARK 3 T TENSOR REMARK 3 T11: 0.2919 T22: 0.2726 REMARK 3 T33: 0.7011 T12: 0.0426 REMARK 3 T13: -0.0877 T23: 0.0519 REMARK 3 L TENSOR REMARK 3 L11: 1.6315 L22: 2.3446 REMARK 3 L33: 0.6460 L12: 0.7699 REMARK 3 L13: -0.3137 L23: -0.0227 REMARK 3 S TENSOR REMARK 3 S11: 0.0910 S12: -0.1425 S13: -0.7667 REMARK 3 S21: 0.1333 S22: -0.0824 S23: -1.0627 REMARK 3 S31: 0.1705 S32: 0.1442 S33: 0.0031 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KQZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1000253010. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41174 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.423 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.8300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.55 REMARK 200 R MERGE FOR SHELL (I) : 0.55700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.240 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: PDB ENTRY 5IFI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: OPTIMIZATION CONDITION AROUND REMARK 280 MOLECULAR DIMENSIONS MCSG1 H3: 200MM LITHIUM ACETATE, 19.1% PEG REMARK 280 3350: COIMA.00629.A.FS11.PD00401 AT 10MG/ML + 1MM TCEP + 1MM REMARK 280 ETHYLAMP: TRAY 317942 F7: CRYO: 20% EG + LIGANDS: PUCK FBB2-2., REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 58.05000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.05000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.05000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 53.60000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 92.83792 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -53.60000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 92.83792 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 GLU A -5 REMARK 465 ASN A -4 REMARK 465 LEU A -3 REMARK 465 TYR A -2 REMARK 465 PHE A -1 REMARK 465 GLN A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 THR A 4 REMARK 465 PRO A 5 REMARK 465 ALA A 6 REMARK 465 GLU A 7 REMARK 465 PRO A 8 REMARK 465 LYS A 9 REMARK 465 LEU A 10 REMARK 465 ASP A 619 REMARK 465 LEU A 620 REMARK 465 PRO A 621 REMARK 465 LYS A 622 REMARK 465 THR A 623 REMARK 465 ARG A 624 REMARK 465 SER A 625 REMARK 465 GLY A 626 REMARK 465 LYS A 627 REMARK 465 SER A 638 REMARK 465 GLY A 639 REMARK 465 GLU A 640 REMARK 465 GLU A 641 REMARK 465 ASP A 642 REMARK 465 SER A 643 REMARK 465 LEU A 644 REMARK 465 GLY A 645 REMARK 465 ASP A 646 REMARK 465 ILE A 647 REMARK 465 SER A 648 REMARK 465 THR A 649 REMARK 465 LEU A 650 REMARK 465 SER A 651 REMARK 465 ASP A 652 REMARK 465 PRO A 653 REMARK 465 SER A 654 REMARK 465 VAL A 655 REMARK 465 VAL A 656 REMARK 465 ASN A 657 REMARK 465 LYS A 658 REMARK 465 ILE A 659 REMARK 465 ILE A 660 REMARK 465 ASP A 661 REMARK 465 THR A 662 REMARK 465 PHE A 663 REMARK 465 HIS A 664 REMARK 465 GLU A 665 REMARK 465 TRP A 666 REMARK 465 LYS A 667 REMARK 465 LYS A 668 REMARK 465 ALA A 669 REMARK 465 MET A 670 REMARK 465 ALA A 671 REMARK 465 ALA A 672 REMARK 465 ALA A 673 REMARK 465 ALA A 674 REMARK 465 ALA A 675 REMARK 465 ALA A 676 REMARK 465 ALA A 677 REMARK 465 ALA A 678 REMARK 465 ALA A 679 REMARK 465 VAL A 680 REMARK 465 SER A 681 REMARK 465 ALA A 682 REMARK 465 THR A 683 REMARK 465 ALA A 684 REMARK 465 PRO A 685 REMARK 465 PRO A 686 REMARK 465 ASN A 687 REMARK 465 SER A 688 REMARK 465 THR A 689 REMARK 465 THR A 690 REMARK 465 GLY A 691 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 12 CG1 CG2 REMARK 470 VAL A 14 CG1 CG2 REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 ASP A 20 CG OD1 OD2 REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 ARG A 107 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 LYS A 287 CG CD CE NZ REMARK 470 LEU A 380 CG CD1 CD2 REMARK 470 ARG A 383 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 409 CG CD OE1 OE2 REMARK 470 ASN A 539 CG OD1 ND2 REMARK 470 GLU A 556 CG CD OE1 OE2 REMARK 470 GLU A 562 CG CD OE1 OE2 REMARK 470 VAL A 566 CG1 CG2 REMARK 470 VAL A 568 CG1 CG2 REMARK 470 LEU A 572 CG CD1 CD2 REMARK 470 THR A 573 OG1 CG2 REMARK 470 GLN A 575 CG CD OE1 NE2 REMARK 470 VAL A 577 CG1 CG2 REMARK 470 VAL A 581 CG1 CG2 REMARK 470 LEU A 583 CG CD1 CD2 REMARK 470 LYS A 584 CG CD CE NZ REMARK 470 SER A 585 OG REMARK 470 ASN A 587 CG OD1 ND2 REMARK 470 ARG A 590 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 591 CG CD OE1 OE2 REMARK 470 LYS A 595 CG CD CE NZ REMARK 470 ILE A 598 CG1 CG2 CD1 REMARK 470 MET A 599 CG SD CE REMARK 470 ARG A 602 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 603 CG CD CE NZ REMARK 470 LYS A 612 CG CD CE NZ REMARK 470 VAL A 613 CG1 CG2 REMARK 470 VAL A 614 CG1 CG2 REMARK 470 VAL A 616 CG1 CG2 REMARK 470 ILE A 617 CG1 CG2 CD1 REMARK 470 ASP A 618 CG OD1 OD2 REMARK 470 ILE A 628 CG1 CG2 CD1 REMARK 470 MET A 629 CG SD CE REMARK 470 ARG A 630 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 631 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 632 CG1 CG2 CD1 REMARK 470 LEU A 633 CG CD1 CD2 REMARK 470 ARG A 634 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 635 CG CD CE NZ REMARK 470 ILE A 636 CG1 CG2 CD1 REMARK 470 LEU A 637 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 74 O HOH A 801 2.10 REMARK 500 OG1 THR A 448 O HOH A 802 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 101 -68.04 -132.94 REMARK 500 ASP A 108 70.63 -150.20 REMARK 500 CYS A 228 75.66 -118.19 REMARK 500 THR A 295 -67.12 -100.78 REMARK 500 VAL A 334 -72.74 -102.90 REMARK 500 TRP A 430 -174.55 -172.63 REMARK 500 THR A 440 145.62 -175.48 REMARK 500 ILE A 445 -52.69 -126.57 REMARK 500 SER A 454 -112.29 65.03 REMARK 500 ASP A 498 66.50 -151.36 REMARK 500 ASP A 535 -166.22 -103.64 REMARK 500 SER A 585 -72.93 -125.50 REMARK 500 ILE A 605 -68.13 -107.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue WTA A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 706 DBREF 7KQZ A 2 691 UNP J3KJC6 J3KJC6_COCIM 2 691 SEQADV 7KQZ MET A -14 UNP J3KJC6 INITIATING METHIONINE SEQADV 7KQZ HIS A -13 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ HIS A -12 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ HIS A -11 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ HIS A -10 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ HIS A -9 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ HIS A -8 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ HIS A -7 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ HIS A -6 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ GLU A -5 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ ASN A -4 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ LEU A -3 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ TYR A -2 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ PHE A -1 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ GLN A 0 UNP J3KJC6 EXPRESSION TAG SEQADV 7KQZ GLY A 1 UNP J3KJC6 EXPRESSION TAG SEQRES 1 A 706 MET HIS HIS HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR SEQRES 2 A 706 PHE GLN GLY SER GLU THR PRO ALA GLU PRO LYS LEU PRO SEQRES 3 A 706 VAL VAL VAL GLU ALA HIS GLN VAL ASP THR PHE ASP VAL SEQRES 4 A 706 PRO GLY VAL PHE TYR GLU ASN HIS PRO HIS GLU PRO HIS SEQRES 5 A 706 LEU SER GLY MET ASN GLU TYR ASN GLN LEU TYR GLN GLN SEQRES 6 A 706 SER ILE ASN ASP PRO ASP THR PHE TRP ALA ARG MET ALA SEQRES 7 A 706 ARG ASP LEU ILE THR PHE GLU LYS ASP PHE ASP LYS THR SEQRES 8 A 706 HIS ILE GLY THR LEU GLU GLY GLY ASP ASN ALA TRP PHE SEQRES 9 A 706 VAL GLY GLY ARG LEU ASN ALA SER PHE ASN CYS VAL ASP SEQRES 10 A 706 ARG HIS ALA MET ARG ASP PRO ASN LYS VAL ALA ILE ILE SEQRES 11 A 706 TYR GLU ALA ASP GLU PRO GLY HIS GLY ARG SER ILE THR SEQRES 12 A 706 TYR ALA GLU LEU LEU LYS GLU VAL SER ARG LEU ALA TRP SEQRES 13 A 706 VAL MET LYS SER GLN GLY VAL ARG LYS GLY ASP THR VAL SEQRES 14 A 706 ALA ILE TYR LEU PRO MET ILE PRO GLU ALA ILE PHE ALA SEQRES 15 A 706 LEU LEU ALA CYS ALA ARG ILE GLY ALA ILE HIS SER VAL SEQRES 16 A 706 VAL PHE ALA GLY PHE SER SER ASP SER LEU ARG ASP ARG SEQRES 17 A 706 THR LEU ASP ALA ARG SER LYS PHE ILE ILE THR THR ASP SEQRES 18 A 706 GLU GLY LYS ARG GLY GLY LYS VAL ILE GLY THR LYS LYS SEQRES 19 A 706 ILE VAL ASP GLU ALA LEU LYS GLN CYS PRO ASP VAL THR SEQRES 20 A 706 ASN CYS LEU VAL PHE LYS ARG THR GLY ALA ASP VAL PRO SEQRES 21 A 706 TRP THR LYS GLY ARG ASP LEU TRP TRP HIS GLU GLU VAL SEQRES 22 A 706 ASP LYS TYR PRO ASN TYR LEU PRO ALA GLU SER MET ASP SEQRES 23 A 706 SER GLU ASP PRO LEU PHE LEU LEU TYR THR SER GLY SER SEQRES 24 A 706 THR GLY LYS PRO LYS GLY VAL MET HIS THR THR ALA GLY SEQRES 25 A 706 TYR LEU VAL GLY ALA ALA ALA THR GLY LYS TYR VAL PHE SEQRES 26 A 706 ASP ILE HIS PRO ALA ASP ARG PHE PHE CYS GLY GLY ASP SEQRES 27 A 706 VAL GLY TRP ILE THR GLY HIS THR TYR VAL VAL TYR ALA SEQRES 28 A 706 PRO LEU LEU LEU GLY CYS THR THR VAL VAL PHE GLU SER SEQRES 29 A 706 THR PRO ALA TYR PRO ASN PHE SER ARG TYR TRP ASP VAL SEQRES 30 A 706 ILE GLU LYS HIS LYS VAL THR GLN PHE TYR VAL ALA PRO SEQRES 31 A 706 THR ALA LEU ARG LEU LEU LYS ARG ALA GLY ASP HIS HIS SEQRES 32 A 706 ILE ASN HIS GLU MET LYS ASP LEU ARG ILE LEU GLY SER SEQRES 33 A 706 VAL GLY GLU PRO ILE ALA ALA GLU VAL TRP LYS TRP TYR SEQRES 34 A 706 HIS GLU VAL VAL GLY LYS ARG GLN ALA HIS ILE VAL ASP SEQRES 35 A 706 THR TYR TRP GLN THR GLU THR GLY SER HIS VAL ILE THR SEQRES 36 A 706 PRO LEU GLY GLY ILE THR PRO THR LYS PRO GLY SER ALA SEQRES 37 A 706 SER LEU PRO PHE PHE GLY ILE ASP PRO VAL ILE LEU ASP SEQRES 38 A 706 PRO VAL THR GLY ALA GLU ILE PRO GLY ASN ASP VAL GLU SEQRES 39 A 706 GLY ILE LEU ALA PHE ARG LYS PRO TRP PRO SER MET ALA SEQRES 40 A 706 ARG THR VAL TRP GLY ASP HIS LYS ARG TYR MET ASP THR SEQRES 41 A 706 TYR LEU ASN VAL TYR LYS GLY PHE TYR PHE THR GLY ASP SEQRES 42 A 706 GLY ALA GLY ARG ASP HIS GLU GLY TYR TYR TRP ILE ARG SEQRES 43 A 706 GLY ARG VAL ASP ASP VAL VAL ASN VAL SER GLY HIS ARG SEQRES 44 A 706 LEU SER THR ALA GLU ILE GLU ALA ALA LEU ILE GLU HIS SEQRES 45 A 706 HIS CYS VAL ALA GLU ALA ALA VAL VAL GLY VAL PRO ASP SEQRES 46 A 706 PRO LEU THR GLY GLN ALA VAL HIS ALA PHE VAL ALA LEU SEQRES 47 A 706 LYS SER GLY ASN ASP ASN ARG GLU GLN LEU GLN LYS GLU SEQRES 48 A 706 LEU ILE MET GLN VAL ARG LYS SER ILE GLY PRO PHE ALA SEQRES 49 A 706 ALA PRO LYS VAL VAL PHE VAL ILE ASP ASP LEU PRO LYS SEQRES 50 A 706 THR ARG SER GLY LYS ILE MET ARG ARG ILE LEU ARG LYS SEQRES 51 A 706 ILE LEU SER GLY GLU GLU ASP SER LEU GLY ASP ILE SER SEQRES 52 A 706 THR LEU SER ASP PRO SER VAL VAL ASN LYS ILE ILE ASP SEQRES 53 A 706 THR PHE HIS GLU TRP LYS LYS ALA MET ALA ALA ALA ALA SEQRES 54 A 706 ALA ALA ALA ALA ALA VAL SER ALA THR ALA PRO PRO ASN SEQRES 55 A 706 SER THR THR GLY HET WTA A 701 25 HET EDO A 702 4 HET EDO A 703 4 HET EDO A 704 4 HET EDO A 705 4 HET EDO A 706 4 HETNAM WTA 5'-O-[(S)-ETHOXY(HYDROXY)PHOSPHORYL]ADENOSINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 WTA C12 H18 N5 O7 P FORMUL 3 EDO 5(C2 H6 O2) FORMUL 8 HOH *320(H2 O) HELIX 1 AA1 VAL A 13 HIS A 17 5 5 HELIX 2 AA2 PRO A 25 HIS A 32 1 8 HELIX 3 AA3 GLY A 40 ASP A 54 1 15 HELIX 4 AA4 ASP A 54 ILE A 67 1 14 HELIX 5 AA5 ASN A 95 VAL A 101 1 7 HELIX 6 AA6 VAL A 101 ASP A 108 1 8 HELIX 7 AA7 TYR A 129 GLN A 146 1 18 HELIX 8 AA8 ILE A 161 GLY A 175 1 15 HELIX 9 AA9 SER A 186 ARG A 198 1 13 HELIX 10 AB1 GLY A 216 LYS A 226 1 11 HELIX 11 AB2 TRP A 254 ASP A 259 1 6 HELIX 12 AB3 THR A 295 VAL A 309 1 15 HELIX 13 AB4 TRP A 326 VAL A 333 1 8 HELIX 14 AB5 VAL A 334 GLY A 341 1 8 HELIX 15 AB6 SER A 357 LYS A 367 1 11 HELIX 16 AB7 ALA A 374 GLY A 385 1 12 HELIX 17 AB8 ASP A 386 ILE A 389 5 4 HELIX 18 AB9 ALA A 407 VAL A 417 1 11 HELIX 19 AC1 GLN A 431 GLY A 435 5 5 HELIX 20 AC2 ASP A 498 LEU A 507 1 10 HELIX 21 AC3 THR A 547 GLU A 556 1 10 HELIX 22 AC4 ASN A 589 ILE A 605 1 17 HELIX 23 AC5 GLY A 606 ALA A 610 5 5 HELIX 24 AC6 MET A 629 LEU A 637 1 9 SHEET 1 AA1 2 LYS A 75 ILE A 78 0 SHEET 2 AA1 2 ALA A 87 VAL A 90 -1 O PHE A 89 N THR A 76 SHEET 1 AA2 2 ARG A 93 LEU A 94 0 SHEET 2 AA2 2 MET A 270 ASP A 271 -1 O MET A 270 N LEU A 94 SHEET 1 AA3 7 ARG A 125 THR A 128 0 SHEET 2 AA3 7 VAL A 112 GLU A 117 -1 N TYR A 116 O ARG A 125 SHEET 3 AA3 7 THR A 343 PHE A 347 1 O VAL A 346 N GLU A 117 SHEET 4 AA3 7 ARG A 317 CYS A 320 1 N PHE A 318 O THR A 343 SHEET 5 AA3 7 GLN A 370 VAL A 373 1 O GLN A 370 N PHE A 319 SHEET 6 AA3 7 ILE A 398 SER A 401 1 O GLY A 400 N PHE A 371 SHEET 7 AA3 7 HIS A 424 ASP A 427 1 O HIS A 424 N LEU A 399 SHEET 1 AA4 8 ASP A 251 TRP A 253 0 SHEET 2 AA4 8 ASN A 233 PHE A 237 1 N VAL A 236 O LEU A 252 SHEET 3 AA4 8 PHE A 201 THR A 205 1 N THR A 204 O LEU A 235 SHEET 4 AA4 8 THR A 153 TYR A 157 1 N TYR A 157 O ILE A 203 SHEET 5 AA4 8 ILE A 177 VAL A 180 1 O SER A 179 N VAL A 154 SHEET 6 AA4 8 PRO A 275 THR A 281 1 O LEU A 278 N HIS A 178 SHEET 7 AA4 8 LYS A 289 THR A 294 -1 O HIS A 293 N LEU A 276 SHEET 8 AA4 8 THR A 494 VAL A 495 -1 O THR A 494 N MET A 292 SHEET 1 AA5 2 GLY A 208 ARG A 210 0 SHEET 2 AA5 2 LYS A 213 ILE A 215 -1 O ILE A 215 N GLY A 208 SHEET 1 AA6 4 PRO A 462 LEU A 465 0 SHEET 2 AA6 4 VAL A 478 PHE A 484 -1 O ILE A 481 N LEU A 465 SHEET 3 AA6 4 TYR A 514 ARG A 522 -1 O ASP A 518 N LEU A 482 SHEET 4 AA6 4 TYR A 528 ARG A 533 -1 O TRP A 529 N GLY A 521 SHEET 1 AA7 2 VAL A 537 VAL A 540 0 SHEET 2 AA7 2 HIS A 543 SER A 546 -1 O HIS A 543 N VAL A 540 SHEET 1 AA8 3 VAL A 560 PRO A 569 0 SHEET 2 AA8 3 GLN A 575 LEU A 583 -1 O ALA A 576 N VAL A 568 SHEET 3 AA8 3 VAL A 614 VAL A 616 1 O PHE A 615 N ALA A 579 CISPEP 1 TYR A 353 PRO A 354 0 1.40 SITE 1 AC1 17 VAL A 402 GLY A 403 GLU A 404 PRO A 405 SITE 2 AC1 17 ASP A 427 THR A 428 TYR A 429 TRP A 430 SITE 3 AC1 17 GLN A 431 THR A 432 ASP A 518 ILE A 530 SITE 4 AC1 17 ARG A 533 ARG A 544 HOH A 826 HOH A 883 SITE 5 AC1 17 HOH A 961 SITE 1 AC2 3 ARG A 61 MET A 62 ASP A 65 SITE 1 AC3 3 GLU A 70 LYS A 71 ASP A 74 SITE 1 AC4 5 TYR A 116 ARG A 125 GLU A 163 PHE A 237 SITE 2 AC4 5 HOH A 809 SITE 1 AC5 5 ARG A 125 ILE A 127 GLU A 135 PHE A 166 SITE 2 AC5 5 HOH A 815 SITE 1 AC6 5 LEU A 66 ARG A 103 LEU A 339 LEU A 340 SITE 2 AC6 5 HOH A 879 CRYST1 107.200 107.200 116.100 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009328 0.005386 0.000000 0.00000 SCALE2 0.000000 0.010771 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008613 0.00000