HEADER VIRAL PROTEIN 20-NOV-20 7KRI TITLE FR6-BOUND SARS-COV-2 NSP9 RNA-REPLICASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 9; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: NSP9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: B KEYWDS SARS-COV-2, NSP9, RNA BINDING COMPLEX, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.R.LITTLER,B.S.GULLY,J.ROSSJOHN REVDAT 5 18-OCT-23 7KRI 1 REMARK REVDAT 4 01-SEP-21 7KRI 1 JRNL REVDAT 3 25-AUG-21 7KRI 1 JRNL REVDAT 2 04-AUG-21 7KRI 1 JRNL REVDAT 1 21-JUL-21 7KRI 0 JRNL AUTH D.R.LITTLER,B.MOHANTY,S.A.LOWERY,R.N.COLSON,B.S.GULLY, JRNL AUTH 2 S.PERLMAN,M.J.SCANLON,J.ROSSJOHN JRNL TITL BINDING OF A PYRIMIDINE RNA BASE-MIMIC TO SARS-COV-2 JRNL TITL 2 NONSTRUCTURAL PROTEIN 9. JRNL REF J.BIOL.CHEM. V. 297 01018 2021 JRNL REFN ESSN 1083-351X JRNL PMID 34331944 JRNL DOI 10.1016/J.JBC.2021.101018 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 73051 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 3605 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6200 - 4.6800 1.00 2824 159 0.1982 0.1816 REMARK 3 2 4.6800 - 3.7100 1.00 2741 127 0.1407 0.1455 REMARK 3 3 3.7100 - 3.2500 1.00 2715 138 0.1579 0.1765 REMARK 3 4 3.2400 - 2.9500 1.00 2721 115 0.1703 0.2178 REMARK 3 5 2.9500 - 2.7400 1.00 2679 138 0.1803 0.1919 REMARK 3 6 2.7400 - 2.5800 1.00 2682 142 0.1807 0.2069 REMARK 3 7 2.5800 - 2.4500 1.00 2700 124 0.1855 0.2101 REMARK 3 8 2.4500 - 2.3400 1.00 2628 167 0.1774 0.2043 REMARK 3 9 2.3400 - 2.2500 1.00 2680 138 0.1767 0.1849 REMARK 3 10 2.2500 - 2.1700 1.00 2690 117 0.1767 0.1901 REMARK 3 11 2.1700 - 2.1000 1.00 2653 133 0.1756 0.2190 REMARK 3 12 2.1000 - 2.0400 1.00 2671 152 0.1742 0.2034 REMARK 3 13 2.0400 - 1.9900 1.00 2666 113 0.1773 0.2090 REMARK 3 14 1.9900 - 1.9400 1.00 2681 114 0.1744 0.2079 REMARK 3 15 1.9400 - 1.9000 1.00 2655 155 0.1738 0.2128 REMARK 3 16 1.9000 - 1.8600 1.00 2594 174 0.1796 0.2012 REMARK 3 17 1.8600 - 1.8200 1.00 2667 143 0.1963 0.2376 REMARK 3 18 1.8200 - 1.7900 1.00 2647 109 0.2065 0.2167 REMARK 3 19 1.7900 - 1.7500 1.00 2663 144 0.2174 0.2373 REMARK 3 20 1.7500 - 1.7200 1.00 2634 186 0.2057 0.2396 REMARK 3 21 1.7200 - 1.7000 1.00 2620 135 0.2257 0.2231 REMARK 3 22 1.7000 - 1.6700 1.00 2639 139 0.2228 0.2612 REMARK 3 23 1.6700 - 1.6500 1.00 2643 146 0.2303 0.2790 REMARK 3 24 1.6500 - 1.6200 1.00 2657 142 0.2427 0.2694 REMARK 3 25 1.6200 - 1.6000 1.00 2627 122 0.2543 0.2487 REMARK 3 26 1.6000 - 1.5800 1.00 2669 133 0.2666 0.3092 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.158 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.122 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3055 REMARK 3 ANGLE : 0.861 4170 REMARK 3 CHIRALITY : 0.053 463 REMARK 3 PLANARITY : 0.005 530 REMARK 3 DIHEDRAL : 24.347 1087 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 55.2201 -11.3540 8.5463 REMARK 3 T TENSOR REMARK 3 T11: 0.1691 T22: 0.1439 REMARK 3 T33: 0.1715 T12: 0.0007 REMARK 3 T13: 0.0026 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.3545 L22: 0.6656 REMARK 3 L33: 0.4656 L12: 0.0155 REMARK 3 L13: 0.0977 L23: -0.0691 REMARK 3 S TENSOR REMARK 3 S11: -0.0161 S12: 0.0223 S13: -0.0442 REMARK 3 S21: -0.0430 S22: 0.0009 S23: 0.0213 REMARK 3 S31: 0.0654 S32: 0.0081 S33: 0.0096 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KRI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1000252914. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95374 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73088 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 44.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6W9Q REMARK 200 REMARK 200 REMARK: BROWN COLOURED REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE PH 4.0 2.2-2.4M REMARK 280 SODIUM MALONATE, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.36400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.68200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.68200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 51.36400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -143.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 25.68200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 ALA A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 MET B -19 REMARK 465 ALA B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 MET C -19 REMARK 465 ALA C -18 REMARK 465 HIS C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 SER C -11 REMARK 465 ALA C -10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B -13 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A -9 -56.55 -132.57 REMARK 500 THR A 24 -78.55 -118.50 REMARK 500 ASN A 27 15.39 -144.88 REMARK 500 ALA B -9 -64.90 -134.02 REMARK 500 THR B 24 -75.45 -122.38 REMARK 500 ASN B 27 13.92 -149.25 REMARK 500 ASP B 60 48.72 71.10 REMARK 500 THR B 62 34.45 -96.59 REMARK 500 ASN C 27 16.82 -145.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue X0Y A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue X0Y A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue X0Y B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue X0Y B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLI C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue X0Y C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue X0Y C 204 DBREF 7KRI A 1 113 UNP P0DTD1 R1AB_SARS2 4141 4253 DBREF 7KRI B 1 113 UNP P0DTD1 R1AB_SARS2 4141 4253 DBREF 7KRI C 1 113 UNP P0DTD1 R1AB_SARS2 4141 4253 SEQADV 7KRI MET A -19 UNP P0DTD1 INITIATING METHIONINE SEQADV 7KRI ALA A -18 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS A -17 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS A -16 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS A -15 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS A -14 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS A -13 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS A -12 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI SER A -11 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI ALA A -10 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI ALA A -9 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI LEU A -8 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLU A -7 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI VAL A -6 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI LEU A -5 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI PHE A -4 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLN A -3 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLY A -2 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI PRO A -1 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLY A 0 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI MET B -19 UNP P0DTD1 INITIATING METHIONINE SEQADV 7KRI ALA B -18 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS B -17 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS B -16 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS B -15 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS B -14 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS B -13 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS B -12 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI SER B -11 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI ALA B -10 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI ALA B -9 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI LEU B -8 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLU B -7 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI VAL B -6 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI LEU B -5 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI PHE B -4 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLN B -3 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLY B -2 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI PRO B -1 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLY B 0 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI MET C -19 UNP P0DTD1 INITIATING METHIONINE SEQADV 7KRI ALA C -18 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS C -17 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS C -16 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS C -15 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS C -14 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS C -13 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI HIS C -12 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI SER C -11 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI ALA C -10 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI ALA C -9 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI LEU C -8 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLU C -7 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI VAL C -6 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI LEU C -5 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI PHE C -4 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLN C -3 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLY C -2 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI PRO C -1 UNP P0DTD1 EXPRESSION TAG SEQADV 7KRI GLY C 0 UNP P0DTD1 EXPRESSION TAG SEQRES 1 A 133 MET ALA HIS HIS HIS HIS HIS HIS SER ALA ALA LEU GLU SEQRES 2 A 133 VAL LEU PHE GLN GLY PRO GLY ASN ASN GLU LEU SER PRO SEQRES 3 A 133 VAL ALA LEU ARG GLN MET SER CYS ALA ALA GLY THR THR SEQRES 4 A 133 GLN THR ALA CYS THR ASP ASP ASN ALA LEU ALA TYR TYR SEQRES 5 A 133 ASN THR THR LYS GLY GLY ARG PHE VAL LEU ALA LEU LEU SEQRES 6 A 133 SER ASP LEU GLN ASP LEU LYS TRP ALA ARG PHE PRO LYS SEQRES 7 A 133 SER ASP GLY THR GLY THR ILE TYR THR GLU LEU GLU PRO SEQRES 8 A 133 PRO CYS ARG PHE VAL THR ASP THR PRO LYS GLY PRO LYS SEQRES 9 A 133 VAL LYS TYR LEU TYR PHE ILE LYS GLY LEU ASN ASN LEU SEQRES 10 A 133 ASN ARG GLY MET VAL LEU GLY SER LEU ALA ALA THR VAL SEQRES 11 A 133 ARG LEU GLN SEQRES 1 B 133 MET ALA HIS HIS HIS HIS HIS HIS SER ALA ALA LEU GLU SEQRES 2 B 133 VAL LEU PHE GLN GLY PRO GLY ASN ASN GLU LEU SER PRO SEQRES 3 B 133 VAL ALA LEU ARG GLN MET SER CYS ALA ALA GLY THR THR SEQRES 4 B 133 GLN THR ALA CYS THR ASP ASP ASN ALA LEU ALA TYR TYR SEQRES 5 B 133 ASN THR THR LYS GLY GLY ARG PHE VAL LEU ALA LEU LEU SEQRES 6 B 133 SER ASP LEU GLN ASP LEU LYS TRP ALA ARG PHE PRO LYS SEQRES 7 B 133 SER ASP GLY THR GLY THR ILE TYR THR GLU LEU GLU PRO SEQRES 8 B 133 PRO CYS ARG PHE VAL THR ASP THR PRO LYS GLY PRO LYS SEQRES 9 B 133 VAL LYS TYR LEU TYR PHE ILE LYS GLY LEU ASN ASN LEU SEQRES 10 B 133 ASN ARG GLY MET VAL LEU GLY SER LEU ALA ALA THR VAL SEQRES 11 B 133 ARG LEU GLN SEQRES 1 C 133 MET ALA HIS HIS HIS HIS HIS HIS SER ALA ALA LEU GLU SEQRES 2 C 133 VAL LEU PHE GLN GLY PRO GLY ASN ASN GLU LEU SER PRO SEQRES 3 C 133 VAL ALA LEU ARG GLN MET SER CYS ALA ALA GLY THR THR SEQRES 4 C 133 GLN THR ALA CYS THR ASP ASP ASN ALA LEU ALA TYR TYR SEQRES 5 C 133 ASN THR THR LYS GLY GLY ARG PHE VAL LEU ALA LEU LEU SEQRES 6 C 133 SER ASP LEU GLN ASP LEU LYS TRP ALA ARG PHE PRO LYS SEQRES 7 C 133 SER ASP GLY THR GLY THR ILE TYR THR GLU LEU GLU PRO SEQRES 8 C 133 PRO CYS ARG PHE VAL THR ASP THR PRO LYS GLY PRO LYS SEQRES 9 C 133 VAL LYS TYR LEU TYR PHE ILE LYS GLY LEU ASN ASN LEU SEQRES 10 C 133 ASN ARG GLY MET VAL LEU GLY SER LEU ALA ALA THR VAL SEQRES 11 C 133 ARG LEU GLN HET SO4 A 201 5 HET X0Y A 202 21 HET X0Y A 203 21 HET SO4 B 201 5 HET X0Y B 202 21 HET X0Y B 203 21 HET SO4 C 201 5 HET MLI C 202 9 HET X0Y C 203 21 HET X0Y C 204 21 HETNAM SO4 SULFATE ION HETNAM X0Y 1,3-DIMETHYL-1H-PYRROLO[3,4-D]PYRIMIDINE-2,4(3H,6H)- HETNAM 2 X0Y DIONE HETNAM MLI MALONATE ION FORMUL 4 SO4 3(O4 S 2-) FORMUL 5 X0Y 6(C8 H9 N3 O2) FORMUL 11 MLI C3 H2 O4 2- FORMUL 14 HOH *314(H2 O) HELIX 1 AA1 PRO A 57 GLY A 61 5 5 HELIX 2 AA2 ASN A 95 VAL A 110 1 16 HELIX 3 AA3 THR B 19 CYS B 23 5 5 HELIX 4 AA4 SER B 59 THR B 62 5 4 HELIX 5 AA5 ASN B 95 VAL B 110 1 16 HELIX 6 AA6 THR C 19 CYS C 23 5 5 HELIX 7 AA7 PRO C 57 GLY C 61 5 5 HELIX 8 AA8 ASN C 95 VAL C 110 1 16 SHEET 1 AA1 4 ALA A -10 GLN A -3 0 SHEET 2 AA1 4 LEU A 4 GLY A 17 -1 O LEU A 9 N ALA A -9 SHEET 3 AA1 4 TRP A 53 ARG A 55 -1 O TRP A 53 N GLY A 17 SHEET 4 AA1 4 THR A 67 GLU A 68 -1 O THR A 67 N ALA A 54 SHEET 1 AA2 6 ALA A -10 GLN A -3 0 SHEET 2 AA2 6 LEU A 4 GLY A 17 -1 O LEU A 9 N ALA A -9 SHEET 3 AA2 6 ALA A 28 THR A 35 -1 O ALA A 30 N MET A 12 SHEET 4 AA2 6 GLY A 38 SER A 46 -1 O LEU A 42 N TYR A 31 SHEET 5 AA2 6 GLY A 82 PHE A 90 -1 O TYR A 89 N LEU A 44 SHEET 6 AA2 6 CYS A 73 THR A 79 -1 N PHE A 75 O LYS A 86 SHEET 1 AA3 4 SER B -11 GLN B -3 0 SHEET 2 AA3 4 LEU B 4 GLY B 17 -1 O SER B 5 N PHE B -4 SHEET 3 AA3 4 TRP B 53 PRO B 57 -1 O ARG B 55 N ALA B 15 SHEET 4 AA3 4 THR B 64 GLU B 68 -1 O ILE B 65 N PHE B 56 SHEET 1 AA4 6 SER B -11 GLN B -3 0 SHEET 2 AA4 6 LEU B 4 GLY B 17 -1 O SER B 5 N PHE B -4 SHEET 3 AA4 6 ALA B 28 THR B 35 -1 O ALA B 30 N MET B 12 SHEET 4 AA4 6 GLY B 38 SER B 46 -1 O PHE B 40 N ASN B 33 SHEET 5 AA4 6 GLY B 82 PHE B 90 -1 O TYR B 89 N LEU B 44 SHEET 6 AA4 6 CYS B 73 THR B 79 -1 N PHE B 75 O LYS B 86 SHEET 1 AA5 4 LEU C -8 GLN C -3 0 SHEET 2 AA5 4 LEU C 4 GLY C 17 -1 O LEU C 9 N LEU C -8 SHEET 3 AA5 4 TRP C 53 ARG C 55 -1 N TRP C 53 O GLY C 17 SHEET 4 AA5 4 TYR C 66 GLU C 68 -1 O THR C 67 N ALA C 54 SHEET 1 AA6 7 LEU C -8 GLN C -3 0 SHEET 2 AA6 7 LEU C 4 GLY C 17 -1 O LEU C 9 N LEU C -8 SHEET 3 AA6 7 ASP C 26 THR C 35 -1 O ALA C 30 N MET C 12 SHEET 4 AA6 7 GLY C 38 SER C 46 -1 O ALA C 43 N TYR C 31 SHEET 5 AA6 7 GLY C 82 PHE C 90 -1 O TYR C 89 N LEU C 44 SHEET 6 AA6 7 CYS C 73 THR C 79 -1 N PHE C 75 O LYS C 86 SHEET 7 AA6 7 LEU C 112 GLN C 113 -1 O GLN C 113 N VAL C 76 CISPEP 1 GLY A -2 PRO A -1 0 6.61 CISPEP 2 GLY B -2 PRO B -1 0 3.08 CISPEP 3 GLY C -2 PRO C -1 0 4.08 SITE 1 AC1 4 HIS A -12 MET A 12 SER A 13 HOH A 326 SITE 1 AC2 9 ASN A 33 THR A 35 PHE A 40 LEU A 42 SITE 2 AC2 9 ASN A 98 X0Y A 203 HOH A 339 GLN C -3 SITE 3 AC2 9 HOH C 396 SITE 1 AC3 4 ASN A 98 X0Y A 202 HOH A 321 X0Y C 204 SITE 1 AC4 5 HIS B -12 MET B 12 SER B 13 HOH B 307 SITE 2 AC4 5 HOH B 357 SITE 1 AC5 7 GLN B -3 ASN B 33 PHE B 40 ASN B 98 SITE 2 AC5 7 X0Y B 203 HOH B 318 HOH B 355 SITE 1 AC6 5 GLN B -3 ASN B 98 X0Y B 202 HOH B 333 SITE 2 AC6 5 HOH B 364 SITE 1 AC7 3 ARG A 74 ARG C 39 HOH C 308 SITE 1 AC8 8 ASN A 95 ASN A 96 LEU A 97 HOH A 386 SITE 2 AC8 8 ASN B 96 ASN C 95 ASN C 96 LEU C 97 SITE 1 AC9 10 GLN A -3 ASN C 33 THR C 35 PHE C 40 SITE 2 AC9 10 LEU C 42 LEU C 94 ASN C 98 X0Y C 204 SITE 3 AC9 10 HOH C 336 HOH C 342 SITE 1 AD1 6 X0Y A 203 HOH A 321 ASN C 95 ASN C 98 SITE 2 AD1 6 X0Y C 203 HOH C 329 CRYST1 109.459 109.459 77.046 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009136 0.005275 0.000000 0.00000 SCALE2 0.000000 0.010549 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012979 0.00000