HEADER HYDROLASE/DNA/INHIBITOR 24-NOV-20 7KU7 TITLE CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX (CSC) TITLE 2 WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048. CLUSTER TITLE 3 IDENTIFIED BY 3-DIMENSIONAL VARIABILITY ANALYSIS IN CRYOSPARC. COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRASE; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 EC: 2.7.7.-; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'- COMPND 8 D(*AP*AP*TP*GP*TP*TP*GP*TP*CP*TP*TP*AP*TP*GP*CP*AP*AP*T)-3'); COMPND 9 CHAIN: I, K; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(*AP*TP*TP*GP*CP*AP*TP*AP*AP*GP*AP*CP*AP*AP*CP*A)- COMPND 13 3'); COMPND 14 CHAIN: J, L; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A); SOURCE 3 ORGANISM_COMMON: RSV-PRC; SOURCE 4 ORGANISM_TAXID: 269446; SOURCE 5 STRAIN: SCHMIDT-RUPPIN A; SOURCE 6 GENE: GAG-POL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: PLYSS; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A); SOURCE 13 ORGANISM_TAXID: 269446; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: ROUS SARCOMA VIRUS (STRAIN SCHMIDT-RUPPIN A); SOURCE 17 ORGANISM_TAXID: 269446 KEYWDS INTASOME, INTEGRASE-VIRAL DNA COMPLEX, HYDROLASE-DNA-INHIBITOR KEYWDS 2 COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR K.K.PANDEY,S.BERA,K.SHI,H.AIHARA,D.P.GRANDGENETT REVDAT 3 06-MAR-24 7KU7 1 REMARK REVDAT 2 24-MAR-21 7KU7 1 JRNL REVDAT 1 17-MAR-21 7KU7 0 JRNL AUTH K.K.PANDEY,S.BERA,K.SHI,M.J.RAU,A.V.OLERU,J.A.J.FITZPATRICK, JRNL AUTH 2 A.N.ENGELMAN,H.AIHARA,D.P.GRANDGENETT JRNL TITL CRYO-EM STRUCTURE OF THE ROUS SARCOMA VIRUS OCTAMERIC JRNL TITL 2 CLEAVED SYNAPTIC COMPLEX INTASOME. JRNL REF COMMUN BIOL V. 4 330 2021 JRNL REFN ESSN 2399-3642 JRNL PMID 33712691 JRNL DOI 10.1038/S42003-021-01855-2 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, PHENIX, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 7JN3 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : 30.000 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.400 REMARK 3 NUMBER OF PARTICLES : 64449 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: REFINED MAP IS FOR ONE CLUSTER IDENTIFIED BY 3 REMARK 3 -DIMENSIONAL VARIABILITY ANALYSIS DONE IN CRYOSPARC. REMARK 4 REMARK 4 7KU7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1000253129. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CLEAVED SYNAPTIC COMPLEX (CSC) REMARK 245 FORMED WITH ROUS SARCOMA VIRUS REMARK 245 INTEGRASE AND VIRAL DNA IN REMARK 245 PRESENCE OF HIV-1 INTEGRASE REMARK 245 STRAND INHIBITOR MK-2048 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.50 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 5187 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 0.01 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6600.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 270 REMARK 465 GLN A 271 REMARK 465 LYS A 272 REMARK 465 ASP A 273 REMARK 465 GLU A 274 REMARK 465 VAL A 275 REMARK 465 THR A 276 REMARK 465 LYS A 277 REMARK 465 LYS A 278 REMARK 465 PRO B 1 REMARK 465 LEU B 2 REMARK 465 ARG B 3 REMARK 465 GLU B 4 REMARK 465 ALA B 5 REMARK 465 LYS B 6 REMARK 465 ASP B 7 REMARK 465 LEU B 8 REMARK 465 HIS B 9 REMARK 465 THR B 10 REMARK 465 ALA B 11 REMARK 465 LEU B 12 REMARK 465 HIS B 13 REMARK 465 ILE B 14 REMARK 465 GLY B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 465 ALA B 18 REMARK 465 LEU B 19 REMARK 465 SER B 20 REMARK 465 LYS B 21 REMARK 465 ALA B 22 REMARK 465 CYS B 23 REMARK 465 ASN B 24 REMARK 465 ILE B 25 REMARK 465 SER B 26 REMARK 465 MET B 27 REMARK 465 GLN B 28 REMARK 465 GLN B 29 REMARK 465 ALA B 30 REMARK 465 ARG B 31 REMARK 465 GLU B 32 REMARK 465 VAL B 33 REMARK 465 VAL B 34 REMARK 465 GLN B 35 REMARK 465 THR B 36 REMARK 465 CYS B 37 REMARK 465 PRO B 38 REMARK 465 HIS B 39 REMARK 465 CYS B 40 REMARK 465 ASN B 41 REMARK 465 SER B 42 REMARK 465 ALA B 43 REMARK 465 PRO B 44 REMARK 465 ALA B 45 REMARK 465 LEU B 46 REMARK 465 GLU B 47 REMARK 465 ALA B 48 REMARK 465 GLY B 49 REMARK 465 VAL B 50 REMARK 465 ASN B 51 REMARK 465 PRO B 52 REMARK 465 ARG B 53 REMARK 465 GLY B 54 REMARK 465 LEU B 55 REMARK 465 GLY B 56 REMARK 465 THR B 270 REMARK 465 GLN B 271 REMARK 465 LYS B 272 REMARK 465 ASP B 273 REMARK 465 GLU B 274 REMARK 465 VAL B 275 REMARK 465 THR B 276 REMARK 465 LYS B 277 REMARK 465 LYS B 278 REMARK 465 PRO C 1 REMARK 465 LEU C 2 REMARK 465 ARG C 3 REMARK 465 GLU C 4 REMARK 465 ALA C 5 REMARK 465 LYS C 6 REMARK 465 ASP C 7 REMARK 465 LEU C 8 REMARK 465 HIS C 9 REMARK 465 THR C 10 REMARK 465 ALA C 11 REMARK 465 LEU C 12 REMARK 465 HIS C 13 REMARK 465 ILE C 14 REMARK 465 GLY C 15 REMARK 465 PRO C 16 REMARK 465 ARG C 17 REMARK 465 ALA C 18 REMARK 465 LEU C 19 REMARK 465 SER C 20 REMARK 465 LYS C 21 REMARK 465 ALA C 22 REMARK 465 CYS C 23 REMARK 465 ASN C 24 REMARK 465 ILE C 25 REMARK 465 SER C 26 REMARK 465 MET C 27 REMARK 465 GLN C 28 REMARK 465 GLN C 29 REMARK 465 ALA C 30 REMARK 465 ARG C 31 REMARK 465 GLU C 32 REMARK 465 VAL C 33 REMARK 465 VAL C 34 REMARK 465 GLN C 35 REMARK 465 THR C 36 REMARK 465 CYS C 37 REMARK 465 PRO C 38 REMARK 465 HIS C 39 REMARK 465 CYS C 40 REMARK 465 ASN C 41 REMARK 465 SER C 42 REMARK 465 ALA C 43 REMARK 465 PRO C 44 REMARK 465 ALA C 45 REMARK 465 LEU C 46 REMARK 465 GLU C 47 REMARK 465 ALA C 48 REMARK 465 GLY C 49 REMARK 465 VAL C 50 REMARK 465 ASN C 51 REMARK 465 PRO C 52 REMARK 465 ARG C 53 REMARK 465 PRO C 215 REMARK 465 THR C 216 REMARK 465 VAL C 217 REMARK 465 LEU C 218 REMARK 465 THR C 219 REMARK 465 GLU C 220 REMARK 465 THR C 270 REMARK 465 GLN C 271 REMARK 465 LYS C 272 REMARK 465 ASP C 273 REMARK 465 GLU C 274 REMARK 465 VAL C 275 REMARK 465 THR C 276 REMARK 465 LYS C 277 REMARK 465 LYS C 278 REMARK 465 PRO D 1 REMARK 465 LEU D 2 REMARK 465 ARG D 3 REMARK 465 GLU D 4 REMARK 465 ALA D 5 REMARK 465 LYS D 6 REMARK 465 ASP D 7 REMARK 465 LEU D 8 REMARK 465 HIS D 9 REMARK 465 THR D 10 REMARK 465 ALA D 11 REMARK 465 LEU D 12 REMARK 465 HIS D 13 REMARK 465 ILE D 14 REMARK 465 GLY D 15 REMARK 465 PRO D 16 REMARK 465 ARG D 17 REMARK 465 ALA D 18 REMARK 465 LEU D 19 REMARK 465 SER D 20 REMARK 465 LYS D 21 REMARK 465 ALA D 22 REMARK 465 CYS D 23 REMARK 465 ASN D 24 REMARK 465 ILE D 25 REMARK 465 SER D 26 REMARK 465 MET D 27 REMARK 465 GLN D 28 REMARK 465 GLN D 29 REMARK 465 ALA D 30 REMARK 465 ARG D 31 REMARK 465 GLU D 32 REMARK 465 VAL D 33 REMARK 465 VAL D 34 REMARK 465 GLN D 35 REMARK 465 THR D 36 REMARK 465 CYS D 37 REMARK 465 PRO D 38 REMARK 465 HIS D 39 REMARK 465 CYS D 40 REMARK 465 ASN D 41 REMARK 465 SER D 42 REMARK 465 ALA D 43 REMARK 465 PRO D 44 REMARK 465 ALA D 45 REMARK 465 LEU D 46 REMARK 465 GLU D 47 REMARK 465 ALA D 48 REMARK 465 GLY D 49 REMARK 465 VAL D 50 REMARK 465 ASN D 51 REMARK 465 PRO D 215 REMARK 465 THR D 216 REMARK 465 VAL D 217 REMARK 465 LEU D 218 REMARK 465 THR D 219 REMARK 465 GLU D 220 REMARK 465 THR D 270 REMARK 465 GLN D 271 REMARK 465 LYS D 272 REMARK 465 ASP D 273 REMARK 465 GLU D 274 REMARK 465 VAL D 275 REMARK 465 THR D 276 REMARK 465 LYS D 277 REMARK 465 LYS D 278 REMARK 465 THR E 270 REMARK 465 GLN E 271 REMARK 465 LYS E 272 REMARK 465 ASP E 273 REMARK 465 GLU E 274 REMARK 465 VAL E 275 REMARK 465 THR E 276 REMARK 465 LYS E 277 REMARK 465 LYS E 278 REMARK 465 PRO F 1 REMARK 465 LEU F 2 REMARK 465 ARG F 3 REMARK 465 GLU F 4 REMARK 465 ALA F 5 REMARK 465 LYS F 6 REMARK 465 ASP F 7 REMARK 465 LEU F 8 REMARK 465 HIS F 9 REMARK 465 THR F 10 REMARK 465 ALA F 11 REMARK 465 LEU F 12 REMARK 465 HIS F 13 REMARK 465 ILE F 14 REMARK 465 GLY F 15 REMARK 465 PRO F 16 REMARK 465 ARG F 17 REMARK 465 ALA F 18 REMARK 465 LEU F 19 REMARK 465 SER F 20 REMARK 465 LYS F 21 REMARK 465 ALA F 22 REMARK 465 CYS F 23 REMARK 465 ASN F 24 REMARK 465 ILE F 25 REMARK 465 SER F 26 REMARK 465 MET F 27 REMARK 465 GLN F 28 REMARK 465 GLN F 29 REMARK 465 ALA F 30 REMARK 465 ARG F 31 REMARK 465 GLU F 32 REMARK 465 VAL F 33 REMARK 465 VAL F 34 REMARK 465 GLN F 35 REMARK 465 THR F 36 REMARK 465 CYS F 37 REMARK 465 PRO F 38 REMARK 465 HIS F 39 REMARK 465 CYS F 40 REMARK 465 ASN F 41 REMARK 465 SER F 42 REMARK 465 ALA F 43 REMARK 465 PRO F 44 REMARK 465 ALA F 45 REMARK 465 LEU F 46 REMARK 465 GLU F 47 REMARK 465 ALA F 48 REMARK 465 GLY F 49 REMARK 465 VAL F 50 REMARK 465 ASN F 51 REMARK 465 PRO F 52 REMARK 465 ARG F 53 REMARK 465 GLY F 54 REMARK 465 LEU F 55 REMARK 465 THR F 270 REMARK 465 GLN F 271 REMARK 465 LYS F 272 REMARK 465 ASP F 273 REMARK 465 GLU F 274 REMARK 465 VAL F 275 REMARK 465 THR F 276 REMARK 465 LYS F 277 REMARK 465 LYS F 278 REMARK 465 PRO G 1 REMARK 465 LEU G 2 REMARK 465 ARG G 3 REMARK 465 GLU G 4 REMARK 465 ALA G 5 REMARK 465 LYS G 6 REMARK 465 ASP G 7 REMARK 465 LEU G 8 REMARK 465 HIS G 9 REMARK 465 THR G 10 REMARK 465 ALA G 11 REMARK 465 LEU G 12 REMARK 465 HIS G 13 REMARK 465 ILE G 14 REMARK 465 GLY G 15 REMARK 465 PRO G 16 REMARK 465 ARG G 17 REMARK 465 ALA G 18 REMARK 465 LEU G 19 REMARK 465 SER G 20 REMARK 465 LYS G 21 REMARK 465 ALA G 22 REMARK 465 CYS G 23 REMARK 465 ASN G 24 REMARK 465 ILE G 25 REMARK 465 SER G 26 REMARK 465 MET G 27 REMARK 465 GLN G 28 REMARK 465 GLN G 29 REMARK 465 ALA G 30 REMARK 465 ARG G 31 REMARK 465 GLU G 32 REMARK 465 VAL G 33 REMARK 465 VAL G 34 REMARK 465 GLN G 35 REMARK 465 THR G 36 REMARK 465 CYS G 37 REMARK 465 PRO G 38 REMARK 465 HIS G 39 REMARK 465 CYS G 40 REMARK 465 ASN G 41 REMARK 465 SER G 42 REMARK 465 ALA G 43 REMARK 465 PRO G 44 REMARK 465 ALA G 45 REMARK 465 LEU G 46 REMARK 465 GLU G 47 REMARK 465 ALA G 48 REMARK 465 GLY G 49 REMARK 465 VAL G 50 REMARK 465 ASN G 51 REMARK 465 TRP G 213 REMARK 465 ARG G 214 REMARK 465 PRO G 215 REMARK 465 THR G 216 REMARK 465 VAL G 217 REMARK 465 LEU G 218 REMARK 465 THR G 219 REMARK 465 GLU G 220 REMARK 465 THR G 270 REMARK 465 GLN G 271 REMARK 465 LYS G 272 REMARK 465 ASP G 273 REMARK 465 GLU G 274 REMARK 465 VAL G 275 REMARK 465 THR G 276 REMARK 465 LYS G 277 REMARK 465 LYS G 278 REMARK 465 PRO H 1 REMARK 465 LEU H 2 REMARK 465 ARG H 3 REMARK 465 GLU H 4 REMARK 465 ALA H 5 REMARK 465 LYS H 6 REMARK 465 ASP H 7 REMARK 465 LEU H 8 REMARK 465 HIS H 9 REMARK 465 THR H 10 REMARK 465 ALA H 11 REMARK 465 LEU H 12 REMARK 465 HIS H 13 REMARK 465 ILE H 14 REMARK 465 GLY H 15 REMARK 465 PRO H 16 REMARK 465 ARG H 17 REMARK 465 ALA H 18 REMARK 465 LEU H 19 REMARK 465 SER H 20 REMARK 465 LYS H 21 REMARK 465 ALA H 22 REMARK 465 CYS H 23 REMARK 465 ASN H 24 REMARK 465 ILE H 25 REMARK 465 SER H 26 REMARK 465 MET H 27 REMARK 465 GLN H 28 REMARK 465 GLN H 29 REMARK 465 ALA H 30 REMARK 465 ARG H 31 REMARK 465 GLU H 32 REMARK 465 VAL H 33 REMARK 465 VAL H 34 REMARK 465 GLN H 35 REMARK 465 THR H 36 REMARK 465 CYS H 37 REMARK 465 PRO H 38 REMARK 465 HIS H 39 REMARK 465 CYS H 40 REMARK 465 ASN H 41 REMARK 465 SER H 42 REMARK 465 ALA H 43 REMARK 465 PRO H 44 REMARK 465 ALA H 45 REMARK 465 LEU H 46 REMARK 465 GLU H 47 REMARK 465 ALA H 48 REMARK 465 GLY H 49 REMARK 465 VAL H 50 REMARK 465 ASN H 51 REMARK 465 TRP H 213 REMARK 465 ARG H 214 REMARK 465 PRO H 215 REMARK 465 THR H 216 REMARK 465 VAL H 217 REMARK 465 LEU H 218 REMARK 465 THR H 219 REMARK 465 GLU H 220 REMARK 465 THR H 270 REMARK 465 GLN H 271 REMARK 465 LYS H 272 REMARK 465 ASP H 273 REMARK 465 GLU H 274 REMARK 465 VAL H 275 REMARK 465 THR H 276 REMARK 465 LYS H 277 REMARK 465 LYS H 278 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG F 74 NE2 GLN F 92 1.97 REMARK 500 O HIS B 104 OG1 THR B 107 2.15 REMARK 500 OG1 THR D 63 OG1 THR D 120 2.19 REMARK 500 OG1 THR H 63 O VAL H 79 2.19 REMARK 500 O CYS H 125 OG SER H 128 2.19 REMARK 500 NH1 ARG E 158 O2 DT K 6 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 32 0.47 -66.47 REMARK 500 PRO A 44 50.89 -67.95 REMARK 500 ASN A 51 75.24 -162.00 REMARK 500 GLN A 153 35.13 -96.08 REMARK 500 ASN B 122 37.03 -99.56 REMARK 500 PRO B 147 75.97 -68.52 REMARK 500 GLN B 153 108.08 -55.18 REMARK 500 ALA B 154 -38.57 -130.32 REMARK 500 LYS B 235 -167.56 -79.13 REMARK 500 PRO C 69 3.53 -67.14 REMARK 500 MET C 177 -60.19 -93.97 REMARK 500 HIS C 212 -164.08 -76.97 REMARK 500 TRP C 213 123.29 -38.48 REMARK 500 GLU C 232 -179.36 -68.56 REMARK 500 PRO C 267 -179.70 -67.46 REMARK 500 GLN D 92 67.76 60.45 REMARK 500 THR D 182 5.41 -68.89 REMARK 500 LYS D 211 31.36 -97.60 REMARK 500 ARG E 31 -72.51 -61.74 REMARK 500 GLU E 32 3.34 -62.46 REMARK 500 PRO E 44 52.64 -67.35 REMARK 500 ASN E 51 71.73 -160.00 REMARK 500 GLN E 153 37.72 -98.50 REMARK 500 GLU E 229 -6.69 -55.27 REMARK 500 ASN F 122 40.33 -108.75 REMARK 500 PRO F 147 76.76 -68.47 REMARK 500 ARG F 179 116.67 -163.37 REMARK 500 LYS F 235 -166.02 -79.36 REMARK 500 ASN G 122 34.30 -95.70 REMARK 500 ASP G 255 49.10 32.00 REMARK 500 ARG H 74 57.21 -90.48 REMARK 500 THR H 120 -169.92 -127.15 REMARK 500 PRO H 147 78.64 -69.51 REMARK 500 ASN H 197 -60.30 -106.40 REMARK 500 PHE H 199 -62.29 -99.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 43 PRO A 44 -147.81 REMARK 500 ALA E 43 PRO E 44 -145.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 9 NE2 REMARK 620 2 HIS A 13 ND1 109.1 REMARK 620 3 CYS A 37 SG 113.5 85.3 REMARK 620 4 CYS A 40 SG 102.5 129.7 116.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD2 REMARK 620 2 GLU A 157 OE1 96.4 REMARK 620 3 GLU A 157 OE2 91.2 61.1 REMARK 620 4 ZZX J 401 OAF 136.0 82.4 124.4 REMARK 620 5 ZZX J 401 OAG 76.9 157.8 139.0 87.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD1 REMARK 620 2 ASP A 64 OD2 47.3 REMARK 620 3 ASP A 121 OD2 71.3 111.0 REMARK 620 4 ZZX J 401 OAG 95.4 53.6 164.6 REMARK 620 5 ZZX J 401 OAE 104.4 120.4 100.2 90.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 9 NE2 REMARK 620 2 HIS E 13 ND1 118.7 REMARK 620 3 CYS E 37 SG 108.5 87.2 REMARK 620 4 CYS E 40 SG 97.3 130.6 113.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 64 OD1 REMARK 620 2 ASP E 121 OD1 125.8 REMARK 620 3 ASP E 121 OD2 95.1 52.0 REMARK 620 4 ZZX L 401 OAE 93.7 101.2 151.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 64 OD2 REMARK 620 2 GLU E 157 OE1 92.7 REMARK 620 3 GLU E 157 OE2 87.5 65.6 REMARK 620 4 ZZX L 401 OAF 146.2 90.6 124.0 REMARK 620 5 ZZX L 401 OAG 84.1 160.4 133.3 81.8 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-22400 RELATED DB: EMDB REMARK 900 EMD-23035 WAS DERIVED FROM EMD-22400 BY 3DVA IN CRYOSPARC. REMARK 900 RELATED ID: EMD-23035 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF ROUS SARCOMA VIRUS CLEAVED SYNAPTIC COMPLEX REMARK 900 (CSC) WITH HIV-1 INTEGRASE STRAND TRANSFER INHIBITOR MK-2048. REMARK 900 CLUSTER IDENTIFIED BY 3-DIMENSIONAL VARIABILITY ANALYSIS IN REMARK 900 CRYOSPARC. DBREF 7KU7 A 1 278 UNP P03354 POL_RSVP 1281 1558 DBREF 7KU7 B 1 278 UNP P03354 POL_RSVP 1281 1558 DBREF 7KU7 C 1 278 UNP P03354 POL_RSVP 1281 1558 DBREF 7KU7 D 1 278 UNP P03354 POL_RSVP 1281 1558 DBREF 7KU7 E 1 278 UNP P03354 POL_RSVP 1281 1558 DBREF 7KU7 F 1 278 UNP P03354 POL_RSVP 1281 1558 DBREF 7KU7 G 1 278 UNP P03354 POL_RSVP 1281 1558 DBREF 7KU7 H 1 278 UNP P03354 POL_RSVP 1281 1558 DBREF 7KU7 I 1 18 PDB 7KU7 7KU7 1 18 DBREF 7KU7 J 21 36 PDB 7KU7 7KU7 21 36 DBREF 7KU7 K 1 18 PDB 7KU7 7KU7 1 18 DBREF 7KU7 L 21 36 PDB 7KU7 7KU7 21 36 SEQADV 7KU7 LYS A 166 UNP P03354 ARG 1446 CONFLICT SEQADV 7KU7 LYS B 166 UNP P03354 ARG 1446 CONFLICT SEQADV 7KU7 LYS C 166 UNP P03354 ARG 1446 CONFLICT SEQADV 7KU7 LYS D 166 UNP P03354 ARG 1446 CONFLICT SEQADV 7KU7 LYS E 166 UNP P03354 ARG 1446 CONFLICT SEQADV 7KU7 LYS F 166 UNP P03354 ARG 1446 CONFLICT SEQADV 7KU7 LYS G 166 UNP P03354 ARG 1446 CONFLICT SEQADV 7KU7 LYS H 166 UNP P03354 ARG 1446 CONFLICT SEQRES 1 A 278 PRO LEU ARG GLU ALA LYS ASP LEU HIS THR ALA LEU HIS SEQRES 2 A 278 ILE GLY PRO ARG ALA LEU SER LYS ALA CYS ASN ILE SER SEQRES 3 A 278 MET GLN GLN ALA ARG GLU VAL VAL GLN THR CYS PRO HIS SEQRES 4 A 278 CYS ASN SER ALA PRO ALA LEU GLU ALA GLY VAL ASN PRO SEQRES 5 A 278 ARG GLY LEU GLY PRO LEU GLN ILE TRP GLN THR ASP PHE SEQRES 6 A 278 THR LEU GLU PRO ARG MET ALA PRO ARG SER TRP LEU ALA SEQRES 7 A 278 VAL THR VAL ASP THR ALA SER SER ALA ILE VAL VAL THR SEQRES 8 A 278 GLN HIS GLY ARG VAL THR SER VAL ALA VAL GLN HIS HIS SEQRES 9 A 278 TRP ALA THR ALA ILE ALA VAL LEU GLY ARG PRO LYS ALA SEQRES 10 A 278 ILE LYS THR ASP ASN GLY SER CYS PHE THR SER LYS SER SEQRES 11 A 278 THR ARG GLU TRP LEU ALA ARG TRP GLY ILE ALA HIS THR SEQRES 12 A 278 THR GLY ILE PRO GLY ASN SER GLN GLY GLN ALA MET VAL SEQRES 13 A 278 GLU ARG ALA ASN ARG LEU LEU LYS ASP LYS ILE ARG VAL SEQRES 14 A 278 LEU ALA GLU GLY ASP GLY PHE MET LYS ARG ILE PRO THR SEQRES 15 A 278 SER LYS GLN GLY GLU LEU LEU ALA LYS ALA MET TYR ALA SEQRES 16 A 278 LEU ASN HIS PHE GLU ARG GLY GLU ASN THR LYS THR PRO SEQRES 17 A 278 ILE GLN LYS HIS TRP ARG PRO THR VAL LEU THR GLU GLY SEQRES 18 A 278 PRO PRO VAL LYS ILE ARG ILE GLU THR GLY GLU TRP GLU SEQRES 19 A 278 LYS GLY TRP ASN VAL LEU VAL TRP GLY ARG GLY TYR ALA SEQRES 20 A 278 ALA VAL LYS ASN ARG ASP THR ASP LYS VAL ILE TRP VAL SEQRES 21 A 278 PRO SER ARG LYS VAL LYS PRO ASP ILE THR GLN LYS ASP SEQRES 22 A 278 GLU VAL THR LYS LYS SEQRES 1 B 278 PRO LEU ARG GLU ALA LYS ASP LEU HIS THR ALA LEU HIS SEQRES 2 B 278 ILE GLY PRO ARG ALA LEU SER LYS ALA CYS ASN ILE SER SEQRES 3 B 278 MET GLN GLN ALA ARG GLU VAL VAL GLN THR CYS PRO HIS SEQRES 4 B 278 CYS ASN SER ALA PRO ALA LEU GLU ALA GLY VAL ASN PRO SEQRES 5 B 278 ARG GLY LEU GLY PRO LEU GLN ILE TRP GLN THR ASP PHE SEQRES 6 B 278 THR LEU GLU PRO ARG MET ALA PRO ARG SER TRP LEU ALA SEQRES 7 B 278 VAL THR VAL ASP THR ALA SER SER ALA ILE VAL VAL THR SEQRES 8 B 278 GLN HIS GLY ARG VAL THR SER VAL ALA VAL GLN HIS HIS SEQRES 9 B 278 TRP ALA THR ALA ILE ALA VAL LEU GLY ARG PRO LYS ALA SEQRES 10 B 278 ILE LYS THR ASP ASN GLY SER CYS PHE THR SER LYS SER SEQRES 11 B 278 THR ARG GLU TRP LEU ALA ARG TRP GLY ILE ALA HIS THR SEQRES 12 B 278 THR GLY ILE PRO GLY ASN SER GLN GLY GLN ALA MET VAL SEQRES 13 B 278 GLU ARG ALA ASN ARG LEU LEU LYS ASP LYS ILE ARG VAL SEQRES 14 B 278 LEU ALA GLU GLY ASP GLY PHE MET LYS ARG ILE PRO THR SEQRES 15 B 278 SER LYS GLN GLY GLU LEU LEU ALA LYS ALA MET TYR ALA SEQRES 16 B 278 LEU ASN HIS PHE GLU ARG GLY GLU ASN THR LYS THR PRO SEQRES 17 B 278 ILE GLN LYS HIS TRP ARG PRO THR VAL LEU THR GLU GLY SEQRES 18 B 278 PRO PRO VAL LYS ILE ARG ILE GLU THR GLY GLU TRP GLU SEQRES 19 B 278 LYS GLY TRP ASN VAL LEU VAL TRP GLY ARG GLY TYR ALA SEQRES 20 B 278 ALA VAL LYS ASN ARG ASP THR ASP LYS VAL ILE TRP VAL SEQRES 21 B 278 PRO SER ARG LYS VAL LYS PRO ASP ILE THR GLN LYS ASP SEQRES 22 B 278 GLU VAL THR LYS LYS SEQRES 1 C 278 PRO LEU ARG GLU ALA LYS ASP LEU HIS THR ALA LEU HIS SEQRES 2 C 278 ILE GLY PRO ARG ALA LEU SER LYS ALA CYS ASN ILE SER SEQRES 3 C 278 MET GLN GLN ALA ARG GLU VAL VAL GLN THR CYS PRO HIS SEQRES 4 C 278 CYS ASN SER ALA PRO ALA LEU GLU ALA GLY VAL ASN PRO SEQRES 5 C 278 ARG GLY LEU GLY PRO LEU GLN ILE TRP GLN THR ASP PHE SEQRES 6 C 278 THR LEU GLU PRO ARG MET ALA PRO ARG SER TRP LEU ALA SEQRES 7 C 278 VAL THR VAL ASP THR ALA SER SER ALA ILE VAL VAL THR SEQRES 8 C 278 GLN HIS GLY ARG VAL THR SER VAL ALA VAL GLN HIS HIS SEQRES 9 C 278 TRP ALA THR ALA ILE ALA VAL LEU GLY ARG PRO LYS ALA SEQRES 10 C 278 ILE LYS THR ASP ASN GLY SER CYS PHE THR SER LYS SER SEQRES 11 C 278 THR ARG GLU TRP LEU ALA ARG TRP GLY ILE ALA HIS THR SEQRES 12 C 278 THR GLY ILE PRO GLY ASN SER GLN GLY GLN ALA MET VAL SEQRES 13 C 278 GLU ARG ALA ASN ARG LEU LEU LYS ASP LYS ILE ARG VAL SEQRES 14 C 278 LEU ALA GLU GLY ASP GLY PHE MET LYS ARG ILE PRO THR SEQRES 15 C 278 SER LYS GLN GLY GLU LEU LEU ALA LYS ALA MET TYR ALA SEQRES 16 C 278 LEU ASN HIS PHE GLU ARG GLY GLU ASN THR LYS THR PRO SEQRES 17 C 278 ILE GLN LYS HIS TRP ARG PRO THR VAL LEU THR GLU GLY SEQRES 18 C 278 PRO PRO VAL LYS ILE ARG ILE GLU THR GLY GLU TRP GLU SEQRES 19 C 278 LYS GLY TRP ASN VAL LEU VAL TRP GLY ARG GLY TYR ALA SEQRES 20 C 278 ALA VAL LYS ASN ARG ASP THR ASP LYS VAL ILE TRP VAL SEQRES 21 C 278 PRO SER ARG LYS VAL LYS PRO ASP ILE THR GLN LYS ASP SEQRES 22 C 278 GLU VAL THR LYS LYS SEQRES 1 D 278 PRO LEU ARG GLU ALA LYS ASP LEU HIS THR ALA LEU HIS SEQRES 2 D 278 ILE GLY PRO ARG ALA LEU SER LYS ALA CYS ASN ILE SER SEQRES 3 D 278 MET GLN GLN ALA ARG GLU VAL VAL GLN THR CYS PRO HIS SEQRES 4 D 278 CYS ASN SER ALA PRO ALA LEU GLU ALA GLY VAL ASN PRO SEQRES 5 D 278 ARG GLY LEU GLY PRO LEU GLN ILE TRP GLN THR ASP PHE SEQRES 6 D 278 THR LEU GLU PRO ARG MET ALA PRO ARG SER TRP LEU ALA SEQRES 7 D 278 VAL THR VAL ASP THR ALA SER SER ALA ILE VAL VAL THR SEQRES 8 D 278 GLN HIS GLY ARG VAL THR SER VAL ALA VAL GLN HIS HIS SEQRES 9 D 278 TRP ALA THR ALA ILE ALA VAL LEU GLY ARG PRO LYS ALA SEQRES 10 D 278 ILE LYS THR ASP ASN GLY SER CYS PHE THR SER LYS SER SEQRES 11 D 278 THR ARG GLU TRP LEU ALA ARG TRP GLY ILE ALA HIS THR SEQRES 12 D 278 THR GLY ILE PRO GLY ASN SER GLN GLY GLN ALA MET VAL SEQRES 13 D 278 GLU ARG ALA ASN ARG LEU LEU LYS ASP LYS ILE ARG VAL SEQRES 14 D 278 LEU ALA GLU GLY ASP GLY PHE MET LYS ARG ILE PRO THR SEQRES 15 D 278 SER LYS GLN GLY GLU LEU LEU ALA LYS ALA MET TYR ALA SEQRES 16 D 278 LEU ASN HIS PHE GLU ARG GLY GLU ASN THR LYS THR PRO SEQRES 17 D 278 ILE GLN LYS HIS TRP ARG PRO THR VAL LEU THR GLU GLY SEQRES 18 D 278 PRO PRO VAL LYS ILE ARG ILE GLU THR GLY GLU TRP GLU SEQRES 19 D 278 LYS GLY TRP ASN VAL LEU VAL TRP GLY ARG GLY TYR ALA SEQRES 20 D 278 ALA VAL LYS ASN ARG ASP THR ASP LYS VAL ILE TRP VAL SEQRES 21 D 278 PRO SER ARG LYS VAL LYS PRO ASP ILE THR GLN LYS ASP SEQRES 22 D 278 GLU VAL THR LYS LYS SEQRES 1 E 278 PRO LEU ARG GLU ALA LYS ASP LEU HIS THR ALA LEU HIS SEQRES 2 E 278 ILE GLY PRO ARG ALA LEU SER LYS ALA CYS ASN ILE SER SEQRES 3 E 278 MET GLN GLN ALA ARG GLU VAL VAL GLN THR CYS PRO HIS SEQRES 4 E 278 CYS ASN SER ALA PRO ALA LEU GLU ALA GLY VAL ASN PRO SEQRES 5 E 278 ARG GLY LEU GLY PRO LEU GLN ILE TRP GLN THR ASP PHE SEQRES 6 E 278 THR LEU GLU PRO ARG MET ALA PRO ARG SER TRP LEU ALA SEQRES 7 E 278 VAL THR VAL ASP THR ALA SER SER ALA ILE VAL VAL THR SEQRES 8 E 278 GLN HIS GLY ARG VAL THR SER VAL ALA VAL GLN HIS HIS SEQRES 9 E 278 TRP ALA THR ALA ILE ALA VAL LEU GLY ARG PRO LYS ALA SEQRES 10 E 278 ILE LYS THR ASP ASN GLY SER CYS PHE THR SER LYS SER SEQRES 11 E 278 THR ARG GLU TRP LEU ALA ARG TRP GLY ILE ALA HIS THR SEQRES 12 E 278 THR GLY ILE PRO GLY ASN SER GLN GLY GLN ALA MET VAL SEQRES 13 E 278 GLU ARG ALA ASN ARG LEU LEU LYS ASP LYS ILE ARG VAL SEQRES 14 E 278 LEU ALA GLU GLY ASP GLY PHE MET LYS ARG ILE PRO THR SEQRES 15 E 278 SER LYS GLN GLY GLU LEU LEU ALA LYS ALA MET TYR ALA SEQRES 16 E 278 LEU ASN HIS PHE GLU ARG GLY GLU ASN THR LYS THR PRO SEQRES 17 E 278 ILE GLN LYS HIS TRP ARG PRO THR VAL LEU THR GLU GLY SEQRES 18 E 278 PRO PRO VAL LYS ILE ARG ILE GLU THR GLY GLU TRP GLU SEQRES 19 E 278 LYS GLY TRP ASN VAL LEU VAL TRP GLY ARG GLY TYR ALA SEQRES 20 E 278 ALA VAL LYS ASN ARG ASP THR ASP LYS VAL ILE TRP VAL SEQRES 21 E 278 PRO SER ARG LYS VAL LYS PRO ASP ILE THR GLN LYS ASP SEQRES 22 E 278 GLU VAL THR LYS LYS SEQRES 1 F 278 PRO LEU ARG GLU ALA LYS ASP LEU HIS THR ALA LEU HIS SEQRES 2 F 278 ILE GLY PRO ARG ALA LEU SER LYS ALA CYS ASN ILE SER SEQRES 3 F 278 MET GLN GLN ALA ARG GLU VAL VAL GLN THR CYS PRO HIS SEQRES 4 F 278 CYS ASN SER ALA PRO ALA LEU GLU ALA GLY VAL ASN PRO SEQRES 5 F 278 ARG GLY LEU GLY PRO LEU GLN ILE TRP GLN THR ASP PHE SEQRES 6 F 278 THR LEU GLU PRO ARG MET ALA PRO ARG SER TRP LEU ALA SEQRES 7 F 278 VAL THR VAL ASP THR ALA SER SER ALA ILE VAL VAL THR SEQRES 8 F 278 GLN HIS GLY ARG VAL THR SER VAL ALA VAL GLN HIS HIS SEQRES 9 F 278 TRP ALA THR ALA ILE ALA VAL LEU GLY ARG PRO LYS ALA SEQRES 10 F 278 ILE LYS THR ASP ASN GLY SER CYS PHE THR SER LYS SER SEQRES 11 F 278 THR ARG GLU TRP LEU ALA ARG TRP GLY ILE ALA HIS THR SEQRES 12 F 278 THR GLY ILE PRO GLY ASN SER GLN GLY GLN ALA MET VAL SEQRES 13 F 278 GLU ARG ALA ASN ARG LEU LEU LYS ASP LYS ILE ARG VAL SEQRES 14 F 278 LEU ALA GLU GLY ASP GLY PHE MET LYS ARG ILE PRO THR SEQRES 15 F 278 SER LYS GLN GLY GLU LEU LEU ALA LYS ALA MET TYR ALA SEQRES 16 F 278 LEU ASN HIS PHE GLU ARG GLY GLU ASN THR LYS THR PRO SEQRES 17 F 278 ILE GLN LYS HIS TRP ARG PRO THR VAL LEU THR GLU GLY SEQRES 18 F 278 PRO PRO VAL LYS ILE ARG ILE GLU THR GLY GLU TRP GLU SEQRES 19 F 278 LYS GLY TRP ASN VAL LEU VAL TRP GLY ARG GLY TYR ALA SEQRES 20 F 278 ALA VAL LYS ASN ARG ASP THR ASP LYS VAL ILE TRP VAL SEQRES 21 F 278 PRO SER ARG LYS VAL LYS PRO ASP ILE THR GLN LYS ASP SEQRES 22 F 278 GLU VAL THR LYS LYS SEQRES 1 G 278 PRO LEU ARG GLU ALA LYS ASP LEU HIS THR ALA LEU HIS SEQRES 2 G 278 ILE GLY PRO ARG ALA LEU SER LYS ALA CYS ASN ILE SER SEQRES 3 G 278 MET GLN GLN ALA ARG GLU VAL VAL GLN THR CYS PRO HIS SEQRES 4 G 278 CYS ASN SER ALA PRO ALA LEU GLU ALA GLY VAL ASN PRO SEQRES 5 G 278 ARG GLY LEU GLY PRO LEU GLN ILE TRP GLN THR ASP PHE SEQRES 6 G 278 THR LEU GLU PRO ARG MET ALA PRO ARG SER TRP LEU ALA SEQRES 7 G 278 VAL THR VAL ASP THR ALA SER SER ALA ILE VAL VAL THR SEQRES 8 G 278 GLN HIS GLY ARG VAL THR SER VAL ALA VAL GLN HIS HIS SEQRES 9 G 278 TRP ALA THR ALA ILE ALA VAL LEU GLY ARG PRO LYS ALA SEQRES 10 G 278 ILE LYS THR ASP ASN GLY SER CYS PHE THR SER LYS SER SEQRES 11 G 278 THR ARG GLU TRP LEU ALA ARG TRP GLY ILE ALA HIS THR SEQRES 12 G 278 THR GLY ILE PRO GLY ASN SER GLN GLY GLN ALA MET VAL SEQRES 13 G 278 GLU ARG ALA ASN ARG LEU LEU LYS ASP LYS ILE ARG VAL SEQRES 14 G 278 LEU ALA GLU GLY ASP GLY PHE MET LYS ARG ILE PRO THR SEQRES 15 G 278 SER LYS GLN GLY GLU LEU LEU ALA LYS ALA MET TYR ALA SEQRES 16 G 278 LEU ASN HIS PHE GLU ARG GLY GLU ASN THR LYS THR PRO SEQRES 17 G 278 ILE GLN LYS HIS TRP ARG PRO THR VAL LEU THR GLU GLY SEQRES 18 G 278 PRO PRO VAL LYS ILE ARG ILE GLU THR GLY GLU TRP GLU SEQRES 19 G 278 LYS GLY TRP ASN VAL LEU VAL TRP GLY ARG GLY TYR ALA SEQRES 20 G 278 ALA VAL LYS ASN ARG ASP THR ASP LYS VAL ILE TRP VAL SEQRES 21 G 278 PRO SER ARG LYS VAL LYS PRO ASP ILE THR GLN LYS ASP SEQRES 22 G 278 GLU VAL THR LYS LYS SEQRES 1 H 278 PRO LEU ARG GLU ALA LYS ASP LEU HIS THR ALA LEU HIS SEQRES 2 H 278 ILE GLY PRO ARG ALA LEU SER LYS ALA CYS ASN ILE SER SEQRES 3 H 278 MET GLN GLN ALA ARG GLU VAL VAL GLN THR CYS PRO HIS SEQRES 4 H 278 CYS ASN SER ALA PRO ALA LEU GLU ALA GLY VAL ASN PRO SEQRES 5 H 278 ARG GLY LEU GLY PRO LEU GLN ILE TRP GLN THR ASP PHE SEQRES 6 H 278 THR LEU GLU PRO ARG MET ALA PRO ARG SER TRP LEU ALA SEQRES 7 H 278 VAL THR VAL ASP THR ALA SER SER ALA ILE VAL VAL THR SEQRES 8 H 278 GLN HIS GLY ARG VAL THR SER VAL ALA VAL GLN HIS HIS SEQRES 9 H 278 TRP ALA THR ALA ILE ALA VAL LEU GLY ARG PRO LYS ALA SEQRES 10 H 278 ILE LYS THR ASP ASN GLY SER CYS PHE THR SER LYS SER SEQRES 11 H 278 THR ARG GLU TRP LEU ALA ARG TRP GLY ILE ALA HIS THR SEQRES 12 H 278 THR GLY ILE PRO GLY ASN SER GLN GLY GLN ALA MET VAL SEQRES 13 H 278 GLU ARG ALA ASN ARG LEU LEU LYS ASP LYS ILE ARG VAL SEQRES 14 H 278 LEU ALA GLU GLY ASP GLY PHE MET LYS ARG ILE PRO THR SEQRES 15 H 278 SER LYS GLN GLY GLU LEU LEU ALA LYS ALA MET TYR ALA SEQRES 16 H 278 LEU ASN HIS PHE GLU ARG GLY GLU ASN THR LYS THR PRO SEQRES 17 H 278 ILE GLN LYS HIS TRP ARG PRO THR VAL LEU THR GLU GLY SEQRES 18 H 278 PRO PRO VAL LYS ILE ARG ILE GLU THR GLY GLU TRP GLU SEQRES 19 H 278 LYS GLY TRP ASN VAL LEU VAL TRP GLY ARG GLY TYR ALA SEQRES 20 H 278 ALA VAL LYS ASN ARG ASP THR ASP LYS VAL ILE TRP VAL SEQRES 21 H 278 PRO SER ARG LYS VAL LYS PRO ASP ILE THR GLN LYS ASP SEQRES 22 H 278 GLU VAL THR LYS LYS SEQRES 1 I 18 DA DA DT DG DT DT DG DT DC DT DT DA DT SEQRES 2 I 18 DG DC DA DA DT SEQRES 1 J 16 DA DT DT DG DC DA DT DA DA DG DA DC DA SEQRES 2 J 16 DA DC DA SEQRES 1 K 18 DA DA DT DG DT DT DG DT DC DT DT DA DT SEQRES 2 K 18 DG DC DA DA DT SEQRES 1 L 16 DA DT DT DG DC DA DT DA DA DG DA DC DA SEQRES 2 L 16 DA DC DA HET ZN A 301 1 HET MG A 302 1 HET MG A 303 1 HET ZN E 301 1 HET MG E 302 1 HET MG E 303 1 HET ZZX J 401 32 HET ZZX L 401 32 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM ZZX (6S)-2-(3-CHLORO-4-FLUOROBENZYL)-8-ETHYL-10-HYDROXY-N, HETNAM 2 ZZX 6-DIMETHYL-1,9-DIOXO-1,2,6,7,8,9-HEXAHYDROPYRAZINO[1', HETNAM 3 ZZX 2':1,5]PYRROLO[2,3-D]PYRIDAZINE-4-CARBOXAMIDE FORMUL 13 ZN 2(ZN 2+) FORMUL 14 MG 4(MG 2+) FORMUL 19 ZZX 2(C21 H21 CL F N5 O4) HELIX 1 AA1 LEU A 2 HIS A 13 1 12 HELIX 2 AA2 GLY A 15 CYS A 23 1 9 HELIX 3 AA3 SER A 26 GLN A 35 1 10 HELIX 4 AA4 CYS A 37 ASN A 41 5 5 HELIX 5 AA5 PRO A 69 ALA A 72 5 4 HELIX 6 AA6 THR A 97 GLY A 113 1 17 HELIX 7 AA7 SER A 128 GLY A 139 1 12 HELIX 8 AA8 GLN A 153 ASP A 174 1 22 HELIX 9 AA9 PRO A 181 SER A 183 5 3 HELIX 10 AB1 LYS A 184 HIS A 198 1 15 HELIX 11 AB2 THR A 207 ARG A 214 1 8 HELIX 12 AB3 THR B 97 GLY B 113 1 17 HELIX 13 AB4 SER B 128 GLY B 139 1 12 HELIX 14 AB5 ALA B 154 ASP B 174 1 21 HELIX 15 AB6 PRO B 181 SER B 183 5 3 HELIX 16 AB7 LYS B 184 PHE B 199 1 16 HELIX 17 AB8 THR B 207 ARG B 214 1 8 HELIX 18 AB9 PRO C 69 ALA C 72 5 4 HELIX 19 AC1 THR C 97 LEU C 112 1 16 HELIX 20 AC2 SER C 128 GLY C 139 1 12 HELIX 21 AC3 ALA C 154 GLY C 175 1 22 HELIX 22 AC4 LYS C 184 HIS C 198 1 15 HELIX 23 AC5 THR D 97 LEU D 112 1 16 HELIX 24 AC6 SER D 128 GLY D 139 1 12 HELIX 25 AC7 GLN D 153 GLY D 175 1 23 HELIX 26 AC8 LYS D 184 HIS D 198 1 15 HELIX 27 AC9 LEU E 2 HIS E 13 1 12 HELIX 28 AD1 GLY E 15 CYS E 23 1 9 HELIX 29 AD2 SER E 26 GLN E 35 1 10 HELIX 30 AD3 CYS E 37 ASN E 41 5 5 HELIX 31 AD4 PRO E 69 ALA E 72 5 4 HELIX 32 AD5 THR E 97 GLY E 113 1 17 HELIX 33 AD6 SER E 128 GLY E 139 1 12 HELIX 34 AD7 GLN E 153 GLY E 173 1 21 HELIX 35 AD8 LYS E 184 HIS E 198 1 15 HELIX 36 AD9 THR E 207 ARG E 214 1 8 HELIX 37 AE1 PRO F 69 ALA F 72 5 4 HELIX 38 AE2 THR F 97 GLY F 113 1 17 HELIX 39 AE3 SER F 128 GLY F 139 1 12 HELIX 40 AE4 MET F 155 ASP F 174 1 20 HELIX 41 AE5 LYS F 184 PHE F 199 1 16 HELIX 42 AE6 THR F 207 TRP F 213 1 7 HELIX 43 AE7 PRO G 69 ALA G 72 5 4 HELIX 44 AE8 THR G 97 GLY G 113 1 17 HELIX 45 AE9 GLY G 123 THR G 127 5 5 HELIX 46 AF1 SER G 128 GLY G 139 1 12 HELIX 47 AF2 MET G 155 GLY G 175 1 21 HELIX 48 AF3 LYS G 184 HIS G 198 1 15 HELIX 49 AF4 THR G 207 HIS G 212 1 6 HELIX 50 AF5 GLU H 68 ALA H 72 5 5 HELIX 51 AF6 THR H 97 GLY H 113 1 17 HELIX 52 AF7 SER H 128 TRP H 138 1 11 HELIX 53 AF8 ASN H 149 GLY H 175 1 27 HELIX 54 AF9 PRO H 181 LEU H 196 1 16 HELIX 55 AG1 THR H 207 HIS H 212 1 6 HELIX 56 AG2 PRO H 261 ARG H 263 5 3 SHEET 1 AA1 5 ILE A 88 GLN A 92 0 SHEET 2 AA1 5 TRP A 76 ASP A 82 -1 N THR A 80 O VAL A 89 SHEET 3 AA1 5 ILE A 60 LEU A 67 -1 N THR A 66 O LEU A 77 SHEET 4 AA1 5 ALA A 117 THR A 120 1 O LYS A 119 N TRP A 61 SHEET 5 AA1 5 THR A 143 THR A 144 1 O THR A 143 N ILE A 118 SHEET 1 AA2 5 VAL A 257 PRO A 261 0 SHEET 2 AA2 5 TYR A 246 ASN A 251 -1 N ALA A 247 O VAL A 260 SHEET 3 AA2 5 TRP A 233 TRP A 242 -1 N ASN A 238 O LYS A 250 SHEET 4 AA2 5 PRO A 223 ARG A 227 -1 N ILE A 226 O GLU A 234 SHEET 5 AA2 5 VAL A 265 PRO A 267 -1 O LYS A 266 N LYS A 225 SHEET 1 AA3 5 ILE B 88 HIS B 93 0 SHEET 2 AA3 5 TRP B 76 ASP B 82 -1 N ALA B 78 O THR B 91 SHEET 3 AA3 5 ILE B 60 LEU B 67 -1 N THR B 66 O LEU B 77 SHEET 4 AA3 5 ALA B 117 LYS B 119 1 O LYS B 119 N TRP B 61 SHEET 5 AA3 5 ALA B 141 THR B 143 1 O ALA B 141 N ILE B 118 SHEET 1 AA4 5 VAL B 257 PRO B 261 0 SHEET 2 AA4 5 TYR B 246 ASN B 251 -1 N VAL B 249 O ILE B 258 SHEET 3 AA4 5 TRP B 233 TRP B 242 -1 N LEU B 240 O ALA B 248 SHEET 4 AA4 5 PRO B 223 ARG B 227 -1 N VAL B 224 O TRP B 237 SHEET 5 AA4 5 VAL B 265 PRO B 267 -1 O LYS B 266 N LYS B 225 SHEET 1 AA5 5 ILE C 88 GLN C 92 0 SHEET 2 AA5 5 TRP C 76 ASP C 82 -1 N THR C 80 O VAL C 89 SHEET 3 AA5 5 TRP C 61 LEU C 67 -1 N GLN C 62 O VAL C 81 SHEET 4 AA5 5 ALA C 117 LYS C 119 1 O LYS C 119 N TRP C 61 SHEET 5 AA5 5 ALA C 141 THR C 143 1 O ALA C 141 N ILE C 118 SHEET 1 AA6 3 TRP C 233 GLU C 234 0 SHEET 2 AA6 3 VAL C 224 ARG C 227 -1 N ILE C 226 O GLU C 234 SHEET 3 AA6 3 VAL C 265 PRO C 267 -1 O LYS C 266 N LYS C 225 SHEET 1 AA7 3 TRP C 237 TRP C 242 0 SHEET 2 AA7 3 TYR C 246 ASN C 251 -1 O LYS C 250 N ASN C 238 SHEET 3 AA7 3 VAL C 257 PRO C 261 -1 O ILE C 258 N VAL C 249 SHEET 1 AA8 5 ILE D 88 VAL D 90 0 SHEET 2 AA8 5 ALA D 78 ASP D 82 -1 N THR D 80 O VAL D 89 SHEET 3 AA8 5 ILE D 60 PHE D 65 -1 N GLN D 62 O VAL D 81 SHEET 4 AA8 5 ALA D 117 ASP D 121 1 O LYS D 119 N TRP D 61 SHEET 5 AA8 5 ALA D 141 GLY D 145 1 O THR D 143 N THR D 120 SHEET 1 AA9 5 VAL D 257 PRO D 261 0 SHEET 2 AA9 5 TYR D 246 ASN D 251 -1 N ALA D 247 O VAL D 260 SHEET 3 AA9 5 TRP D 237 VAL D 239 -1 N ASN D 238 O LYS D 250 SHEET 4 AA9 5 PRO D 223 ILE D 226 -1 N VAL D 224 O TRP D 237 SHEET 5 AA9 5 VAL D 265 PRO D 267 -1 O LYS D 266 N LYS D 225 SHEET 1 AB1 5 ILE E 88 HIS E 93 0 SHEET 2 AB1 5 TRP E 76 ASP E 82 -1 N ALA E 78 O THR E 91 SHEET 3 AB1 5 ILE E 60 LEU E 67 -1 N ASP E 64 O VAL E 79 SHEET 4 AB1 5 ALA E 117 THR E 120 1 O LYS E 119 N TRP E 61 SHEET 5 AB1 5 THR E 143 THR E 144 1 O THR E 143 N THR E 120 SHEET 1 AB2 5 VAL E 257 PRO E 261 0 SHEET 2 AB2 5 TYR E 246 LYS E 250 -1 N ALA E 247 O VAL E 260 SHEET 3 AB2 5 TRP E 233 TRP E 242 -1 N ASN E 238 O LYS E 250 SHEET 4 AB2 5 PRO E 223 ARG E 227 -1 N ILE E 226 O GLU E 234 SHEET 5 AB2 5 VAL E 265 PRO E 267 -1 O LYS E 266 N LYS E 225 SHEET 1 AB3 5 ILE F 88 HIS F 93 0 SHEET 2 AB3 5 TRP F 76 ASP F 82 -1 N THR F 80 O VAL F 89 SHEET 3 AB3 5 TRP F 61 LEU F 67 -1 N GLN F 62 O VAL F 81 SHEET 4 AB3 5 ALA F 117 LYS F 119 1 O ALA F 117 N TRP F 61 SHEET 5 AB3 5 ALA F 141 THR F 143 1 O ALA F 141 N ILE F 118 SHEET 1 AB4 5 VAL F 257 PRO F 261 0 SHEET 2 AB4 5 TYR F 246 ASN F 251 -1 N ALA F 247 O VAL F 260 SHEET 3 AB4 5 TRP F 233 VAL F 241 -1 N LEU F 240 O ALA F 248 SHEET 4 AB4 5 PRO F 223 ARG F 227 -1 N VAL F 224 O TRP F 237 SHEET 5 AB4 5 VAL F 265 PRO F 267 -1 O LYS F 266 N LYS F 225 SHEET 1 AB5 5 ILE G 88 VAL G 90 0 SHEET 2 AB5 5 TRP G 76 ASP G 82 -1 N THR G 80 O VAL G 89 SHEET 3 AB5 5 ILE G 60 LEU G 67 -1 N THR G 66 O LEU G 77 SHEET 4 AB5 5 ALA G 117 LYS G 119 1 O ALA G 117 N TRP G 61 SHEET 5 AB5 5 ALA G 141 THR G 143 1 O THR G 143 N ILE G 118 SHEET 1 AB6 5 VAL G 257 PRO G 261 0 SHEET 2 AB6 5 TYR G 246 ASN G 251 -1 N ALA G 247 O VAL G 260 SHEET 3 AB6 5 TRP G 233 TRP G 242 -1 N ASN G 238 O LYS G 250 SHEET 4 AB6 5 PRO G 223 ARG G 227 -1 N VAL G 224 O TRP G 237 SHEET 5 AB6 5 VAL G 265 PRO G 267 -1 O LYS G 266 N LYS G 225 SHEET 1 AB7 5 ILE H 88 VAL H 89 0 SHEET 2 AB7 5 VAL H 79 ASP H 82 -1 N THR H 80 O VAL H 89 SHEET 3 AB7 5 TRP H 61 ASP H 64 -1 N GLN H 62 O VAL H 81 SHEET 4 AB7 5 ALA H 117 LYS H 119 1 O LYS H 119 N TRP H 61 SHEET 5 AB7 5 ALA H 141 HIS H 142 1 O ALA H 141 N ILE H 118 SHEET 1 AB8 5 VAL H 257 VAL H 260 0 SHEET 2 AB8 5 ALA H 247 ASN H 251 -1 N ALA H 247 O VAL H 260 SHEET 3 AB8 5 TRP H 233 TRP H 242 -1 N VAL H 241 O ALA H 248 SHEET 4 AB8 5 PRO H 223 ARG H 227 -1 N ILE H 226 O GLU H 234 SHEET 5 AB8 5 VAL H 265 PRO H 267 -1 O LYS H 266 N LYS H 225 LINK NE2 HIS A 9 ZN ZN A 301 1555 1555 2.05 LINK ND1 HIS A 13 ZN ZN A 301 1555 1555 2.05 LINK SG CYS A 37 ZN ZN A 301 1555 1555 2.30 LINK SG CYS A 40 ZN ZN A 301 1555 1555 2.30 LINK OD2 ASP A 64 MG MG A 302 1555 1555 1.97 LINK OD1 ASP A 64 MG MG A 303 1555 1555 2.05 LINK OD2 ASP A 64 MG MG A 303 1555 1555 2.98 LINK OD2 ASP A 121 MG MG A 303 1555 1555 2.76 LINK OE1 GLU A 157 MG MG A 302 1555 1555 2.34 LINK OE2 GLU A 157 MG MG A 302 1555 1555 1.92 LINK MG MG A 302 OAF ZZX J 401 1555 1555 1.92 LINK MG MG A 302 OAG ZZX J 401 1555 1555 1.91 LINK MG MG A 303 OAG ZZX J 401 1555 1555 2.02 LINK MG MG A 303 OAE ZZX J 401 1555 1555 1.97 LINK NE2 HIS E 9 ZN ZN E 301 1555 1555 2.05 LINK ND1 HIS E 13 ZN ZN E 301 1555 1555 2.05 LINK SG CYS E 37 ZN ZN E 301 1555 1555 2.30 LINK SG CYS E 40 ZN ZN E 301 1555 1555 2.30 LINK OD1 ASP E 64 MG MG E 302 1555 1555 2.02 LINK OD2 ASP E 64 MG MG E 303 1555 1555 2.03 LINK OD1 ASP E 121 MG MG E 302 1555 1555 2.72 LINK OD2 ASP E 121 MG MG E 302 1555 1555 2.14 LINK OE1 GLU E 157 MG MG E 303 1555 1555 2.06 LINK OE2 GLU E 157 MG MG E 303 1555 1555 1.99 LINK MG MG E 302 OAE ZZX L 401 1555 1555 2.35 LINK MG MG E 303 OAF ZZX L 401 1555 1555 2.09 LINK MG MG E 303 OAG ZZX L 401 1555 1555 1.93 CISPEP 1 ALA A 72 PRO A 73 0 0.59 CISPEP 2 ALA B 72 PRO B 73 0 5.48 CISPEP 3 ALA C 72 PRO C 73 0 6.73 CISPEP 4 ILE C 146 PRO C 147 0 -2.36 CISPEP 5 ALA D 72 PRO D 73 0 5.16 CISPEP 6 ALA E 72 PRO E 73 0 2.56 CISPEP 7 ALA F 72 PRO F 73 0 -4.45 CISPEP 8 ALA G 72 PRO G 73 0 5.40 CISPEP 9 ALA H 72 PRO H 73 0 -2.91 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000