data_7KVX # _entry.id 7KVX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7KVX pdb_00007kvx 10.2210/pdb7kvx/pdb WWPDB D_1000253256 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7KVX _pdbx_database_status.recvd_initial_deposition_date 2020-11-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Skene, R.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-1482-6546 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 64 _citation.language ? _citation.page_first 6902 _citation.page_last 6923 _citation.title ;Identification of Novel Carbocyclic Pyrimidine Cyclic Dinucleotide STING Agonists for Antitumor Immunotherapy Using Systemic Intravenous Route. ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.1c00374 _citation.pdbx_database_id_PubMed 34000802 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vyskocil, S.' 1 ? primary 'Cardin, D.' 2 ? primary 'Ciavarri, J.' 3 ? primary 'Conlon, J.' 4 ? primary 'Cullis, C.' 5 ? primary 'England, D.' 6 ? primary 'Gershman, R.' 7 ? primary 'Gigstad, K.' 8 ? primary 'Gipson, K.' 9 ? primary 'Gould, A.' 10 ? primary 'Greenspan, P.' 11 ? primary 'Griffin, R.' 12 ? primary 'Gulavita, N.' 13 ? primary 'Harrison, S.' 14 ? primary 'Hu, Z.' 15 ? primary 'Hu, Y.' 16 ? primary 'Hata, A.' 17 ? primary 'Huang, J.' 18 ? primary 'Huang, S.C.' 19 ? primary 'Janowick, D.' 20 ? primary 'Jones, M.' 21 ? primary 'Kolev, V.' 22 ? primary 'Langston, S.P.' 23 ? primary 'Lee, H.M.' 24 ? primary 'Li, G.' 25 ? primary 'Lok, D.' 26 ? primary 'Ma, L.' 27 ? primary 'Mai, D.' 28 ? primary 'Malley, J.' 29 ? primary 'Matsuda, A.' 30 ? primary 'Mizutani, H.' 31 ? primary 'Mizutani, M.' 32 ? primary 'Molchanova, N.' 33 ? primary 'Nunes, E.' 34 ? primary 'Pusalkar, S.' 35 ? primary 'Renou, C.' 36 ? primary 'Rowland, S.' 37 ? primary 'Sato, Y.' 38 ? primary 'Shaw, M.' 39 ? primary 'Shen, L.' 40 ? primary 'Shi, Z.' 41 ? primary 'Skene, R.' 42 ? primary 'Soucy, F.' 43 ? primary 'Stroud, S.' 44 ? primary 'Xu, H.' 45 ? primary 'Xu, T.' 46 ? primary 'Abu-Yousif, A.O.' 47 ? primary 'Zhang, J.' 48 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 96.520 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7KVX _cell.details ? _cell.formula_units_Z ? _cell.length_a 89.495 _cell.length_a_esd ? _cell.length_b 78.539 _cell.length_b_esd ? _cell.length_c 36.010 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7KVX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Stimulator of interferon genes protein' 27211.619 1 ? ? ? ? 2 non-polymer syn ;(2R,5R,7R,8R,10R,12aR,14R,15aS,16R)-7-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-16-hydroxy-14-[(pyrimidin-4-yl)amino]-2,10-disulfanyldecahydro-2H,10H-5,8-methano-2lambda~5~,10lambda~5~-cyclopenta[l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione ; 648.546 1 ? ? ? ? 3 water nat water 18.015 46 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Transmembrane protein 173' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGSAPAEISAVCEKGNFNVAHGLAWSYYIGYLRLILPELQARIRTYNQHYNNLLRGAVSQRLYILLPLDCGVPDNLSMAD PNIRFLDKLPQQTGDRAGIKDRVYSNSIYELLENGQRAGTCVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRTLE DILADAPESQNNCRLIAYQEPADDSSFSLSQEVLRHLRQEEKEEVTVGSLKTSAVPSTSTMSQEPELLISGMEKPLPLRT DFS ; _entity_poly.pdbx_seq_one_letter_code_can ;GGSAPAEISAVCEKGNFNVAHGLAWSYYIGYLRLILPELQARIRTYNQHYNNLLRGAVSQRLYILLPLDCGVPDNLSMAD PNIRFLDKLPQQTGDRAGIKDRVYSNSIYELLENGQRAGTCVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRTLE DILADAPESQNNCRLIAYQEPADDSSFSLSQEVLRHLRQEEKEEVTVGSLKTSAVPSTSTMSQEPELLISGMEKPLPLRT DFS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 SER n 1 4 ALA n 1 5 PRO n 1 6 ALA n 1 7 GLU n 1 8 ILE n 1 9 SER n 1 10 ALA n 1 11 VAL n 1 12 CYS n 1 13 GLU n 1 14 LYS n 1 15 GLY n 1 16 ASN n 1 17 PHE n 1 18 ASN n 1 19 VAL n 1 20 ALA n 1 21 HIS n 1 22 GLY n 1 23 LEU n 1 24 ALA n 1 25 TRP n 1 26 SER n 1 27 TYR n 1 28 TYR n 1 29 ILE n 1 30 GLY n 1 31 TYR n 1 32 LEU n 1 33 ARG n 1 34 LEU n 1 35 ILE n 1 36 LEU n 1 37 PRO n 1 38 GLU n 1 39 LEU n 1 40 GLN n 1 41 ALA n 1 42 ARG n 1 43 ILE n 1 44 ARG n 1 45 THR n 1 46 TYR n 1 47 ASN n 1 48 GLN n 1 49 HIS n 1 50 TYR n 1 51 ASN n 1 52 ASN n 1 53 LEU n 1 54 LEU n 1 55 ARG n 1 56 GLY n 1 57 ALA n 1 58 VAL n 1 59 SER n 1 60 GLN n 1 61 ARG n 1 62 LEU n 1 63 TYR n 1 64 ILE n 1 65 LEU n 1 66 LEU n 1 67 PRO n 1 68 LEU n 1 69 ASP n 1 70 CYS n 1 71 GLY n 1 72 VAL n 1 73 PRO n 1 74 ASP n 1 75 ASN n 1 76 LEU n 1 77 SER n 1 78 MET n 1 79 ALA n 1 80 ASP n 1 81 PRO n 1 82 ASN n 1 83 ILE n 1 84 ARG n 1 85 PHE n 1 86 LEU n 1 87 ASP n 1 88 LYS n 1 89 LEU n 1 90 PRO n 1 91 GLN n 1 92 GLN n 1 93 THR n 1 94 GLY n 1 95 ASP n 1 96 ARG n 1 97 ALA n 1 98 GLY n 1 99 ILE n 1 100 LYS n 1 101 ASP n 1 102 ARG n 1 103 VAL n 1 104 TYR n 1 105 SER n 1 106 ASN n 1 107 SER n 1 108 ILE n 1 109 TYR n 1 110 GLU n 1 111 LEU n 1 112 LEU n 1 113 GLU n 1 114 ASN n 1 115 GLY n 1 116 GLN n 1 117 ARG n 1 118 ALA n 1 119 GLY n 1 120 THR n 1 121 CYS n 1 122 VAL n 1 123 LEU n 1 124 GLU n 1 125 TYR n 1 126 ALA n 1 127 THR n 1 128 PRO n 1 129 LEU n 1 130 GLN n 1 131 THR n 1 132 LEU n 1 133 PHE n 1 134 ALA n 1 135 MET n 1 136 SER n 1 137 GLN n 1 138 TYR n 1 139 SER n 1 140 GLN n 1 141 ALA n 1 142 GLY n 1 143 PHE n 1 144 SER n 1 145 ARG n 1 146 GLU n 1 147 ASP n 1 148 ARG n 1 149 LEU n 1 150 GLU n 1 151 GLN n 1 152 ALA n 1 153 LYS n 1 154 LEU n 1 155 PHE n 1 156 CYS n 1 157 ARG n 1 158 THR n 1 159 LEU n 1 160 GLU n 1 161 ASP n 1 162 ILE n 1 163 LEU n 1 164 ALA n 1 165 ASP n 1 166 ALA n 1 167 PRO n 1 168 GLU n 1 169 SER n 1 170 GLN n 1 171 ASN n 1 172 ASN n 1 173 CYS n 1 174 ARG n 1 175 LEU n 1 176 ILE n 1 177 ALA n 1 178 TYR n 1 179 GLN n 1 180 GLU n 1 181 PRO n 1 182 ALA n 1 183 ASP n 1 184 ASP n 1 185 SER n 1 186 SER n 1 187 PHE n 1 188 SER n 1 189 LEU n 1 190 SER n 1 191 GLN n 1 192 GLU n 1 193 VAL n 1 194 LEU n 1 195 ARG n 1 196 HIS n 1 197 LEU n 1 198 ARG n 1 199 GLN n 1 200 GLU n 1 201 GLU n 1 202 LYS n 1 203 GLU n 1 204 GLU n 1 205 VAL n 1 206 THR n 1 207 VAL n 1 208 GLY n 1 209 SER n 1 210 LEU n 1 211 LYS n 1 212 THR n 1 213 SER n 1 214 ALA n 1 215 VAL n 1 216 PRO n 1 217 SER n 1 218 THR n 1 219 SER n 1 220 THR n 1 221 MET n 1 222 SER n 1 223 GLN n 1 224 GLU n 1 225 PRO n 1 226 GLU n 1 227 LEU n 1 228 LEU n 1 229 ILE n 1 230 SER n 1 231 GLY n 1 232 MET n 1 233 GLU n 1 234 LYS n 1 235 PRO n 1 236 LEU n 1 237 PRO n 1 238 LEU n 1 239 ARG n 1 240 THR n 1 241 ASP n 1 242 PHE n 1 243 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 243 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'STING, LOC340061, hCG_1782396' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A2R3XZB7_HUMAN _struct_ref.pdbx_db_accession A0A2R3XZB7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APAEISAVCEKGNFNVAHGLAWSYYIGYLRLILPELQARIRTYNQHYNNLLRGAVSQRLYILLPLDCGVPDNLSMADPNI RFLDKLPQQTGDRAGIKDRVYSNSIYELLENGQRAGTCVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRTLEDIL ADAPESQNNCRLIAYQEPADDSSFSLSQEVLRHLRQEEKEEVTVGSLKTSAVPSTSTMSQEPELLISGMEKPLPLRTDFS ; _struct_ref.pdbx_align_begin 140 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7KVX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 243 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A2R3XZB7 _struct_ref_seq.db_align_beg 140 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 379 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 140 _struct_ref_seq.pdbx_auth_seq_align_end 379 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7KVX GLY A 1 ? UNP A0A2R3XZB7 ? ? 'expression tag' 137 1 1 7KVX GLY A 2 ? UNP A0A2R3XZB7 ? ? 'expression tag' 138 2 1 7KVX SER A 3 ? UNP A0A2R3XZB7 ? ? 'expression tag' 139 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 X5J non-polymer . ;(2R,5R,7R,8R,10R,12aR,14R,15aS,16R)-7-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-16-hydroxy-14-[(pyrimidin-4-yl)amino]-2,10-disulfanyldecahydro-2H,10H-5,8-methano-2lambda~5~,10lambda~5~-cyclopenta[l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione ; ? 'C20 H26 N8 O9 P2 S2' 648.546 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7KVX _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '26.0% PEG 3350, 0.200M Ammonium Sulfate, 0.1M bis-tris pH 7.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-08-29 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1806 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.3' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.1806 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.3 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7KVX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.480 _reflns.d_resolution_low 44.460 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8802 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.100 _reflns.pdbx_Rmerge_I_obs 0.104 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.119 _reflns.pdbx_Rpim_I_all 0.057 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 36429 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 2.480 2.580 ? ? 4099 ? ? ? 988 99.700 ? ? ? ? 1.269 ? ? ? ? ? ? ? ? 4.100 ? ? ? 1.100 1.457 0.704 ? 1 1 0.381 ? ? 8.940 44.460 ? ? 747 ? ? ? 196 98.600 ? ? ? ? 0.038 ? ? ? ? ? ? ? ? 3.800 ? ? ? 27.400 0.044 0.021 ? 2 1 0.998 ? ? # _refine.aniso_B[1][1] -0.1300 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 1.2400 _refine.aniso_B[2][2] 0.2300 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.3700 _refine.B_iso_max 125.650 _refine.B_iso_mean 60.1330 _refine.B_iso_min 32.210 _refine.correlation_coeff_Fo_to_Fc 0.9640 _refine.correlation_coeff_Fo_to_Fc_free 0.9370 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7KVX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4800 _refine.ls_d_res_low 35.8000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8377 _refine.ls_number_reflns_R_free 420 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6100 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1842 _refine.ls_R_factor_R_free 0.2415 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1814 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4KSY _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.3880 _refine.pdbx_overall_ESU_R_Free 0.2630 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 23.7550 _refine.overall_SU_ML 0.2450 _refine.overall_SU_R_Cruickshank_DPI 0.3882 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.4800 _refine_hist.d_res_low 35.8000 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 1552 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 181 _refine_hist.pdbx_B_iso_mean_ligand 40.41 _refine_hist.pdbx_B_iso_mean_solvent 58.35 _refine_hist.pdbx_number_atoms_protein 1465 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.013 1541 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 1361 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.574 1.690 2095 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.237 1.568 3151 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.987 5.000 179 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 28.962 21.562 96 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 16.257 15.000 255 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 20.050 15.000 15 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.076 0.200 197 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 1749 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 332 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.4800 _refine_ls_shell.d_res_low 2.5440 _refine_ls_shell.number_reflns_all 627 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.number_reflns_R_work 601 _refine_ls_shell.percent_reflns_obs 99.3700 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4370 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3380 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7KVX _struct.title 'Structure of hSTING in complex with novel carbocyclic pyrimidine CDN 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7KVX _struct_keywords.text 'immunotherapy, stimulator of interferon genes, cyclic dinucleotide, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 17 ? TYR A 31 ? PHE A 153 TYR A 167 1 ? 15 HELX_P HELX_P2 AA2 TYR A 31 ? LEU A 36 ? TYR A 167 LEU A 172 1 ? 6 HELX_P HELX_P3 AA3 GLU A 38 ? TYR A 50 ? GLU A 174 TYR A 186 1 ? 13 HELX_P HELX_P4 AA4 ASN A 75 ? ALA A 79 ? ASN A 211 ALA A 215 5 ? 5 HELX_P HELX_P5 AA5 ALA A 126 ? TYR A 138 ? ALA A 262 TYR A 274 1 ? 13 HELX_P HELX_P6 AA6 SER A 139 ? GLY A 142 ? SER A 275 GLY A 278 5 ? 4 HELX_P HELX_P7 AA7 SER A 144 ? ASP A 165 ? SER A 280 ASP A 301 1 ? 22 HELX_P HELX_P8 AA8 SER A 188 ? ARG A 198 ? SER A 324 ARG A 334 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 83 ? LYS A 88 ? ILE A 219 LYS A 224 AA1 2 SER A 107 ? GLU A 113 ? SER A 243 GLU A 249 AA1 3 GLN A 116 ? TYR A 125 ? GLN A 252 TYR A 261 AA1 4 LEU A 62 ? PRO A 67 ? LEU A 198 PRO A 203 AA1 5 CYS A 173 ? TYR A 178 ? CYS A 309 TYR A 314 AA2 1 GLN A 92 ? ARG A 96 ? GLN A 228 ARG A 232 AA2 2 ILE A 99 ? TYR A 104 ? ILE A 235 TYR A 240 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 87 ? N ASP A 223 O ILE A 108 ? O ILE A 244 AA1 2 3 N GLU A 113 ? N GLU A 249 O GLN A 116 ? O GLN A 252 AA1 3 4 O GLU A 124 ? O GLU A 260 N LEU A 65 ? N LEU A 201 AA1 4 5 N LEU A 62 ? N LEU A 198 O ARG A 174 ? O ARG A 310 AA2 1 2 N GLN A 92 ? N GLN A 228 O TYR A 104 ? O TYR A 240 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id X5J _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 23 _struct_site.details 'binding site for residue X5J A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 SER A 26 ? SER A 162 . ? 1_555 ? 2 AC1 23 SER A 26 ? SER A 162 . ? 2_656 ? 3 AC1 23 TYR A 27 ? TYR A 163 . ? 1_555 ? 4 AC1 23 TYR A 31 ? TYR A 167 . ? 2_656 ? 5 AC1 23 TYR A 31 ? TYR A 167 . ? 1_555 ? 6 AC1 23 ARG A 102 ? ARG A 238 . ? 1_555 ? 7 AC1 23 ARG A 102 ? ARG A 238 . ? 2_656 ? 8 AC1 23 TYR A 104 ? TYR A 240 . ? 2_656 ? 9 AC1 23 THR A 127 ? THR A 263 . ? 1_555 ? 10 AC1 23 THR A 127 ? THR A 263 . ? 2_656 ? 11 AC1 23 PRO A 128 ? PRO A 264 . ? 2_656 ? 12 AC1 23 PRO A 128 ? PRO A 264 . ? 1_555 ? 13 AC1 23 THR A 131 ? THR A 267 . ? 1_555 ? 14 AC1 23 THR A 131 ? THR A 267 . ? 2_656 ? 15 AC1 23 HOH C . ? HOH A 504 . ? 1_555 ? 16 AC1 23 HOH C . ? HOH A 509 . ? 2_656 ? 17 AC1 23 HOH C . ? HOH A 509 . ? 1_555 ? 18 AC1 23 HOH C . ? HOH A 511 . ? 1_555 ? 19 AC1 23 HOH C . ? HOH A 511 . ? 2_656 ? 20 AC1 23 HOH C . ? HOH A 514 . ? 2_656 ? 21 AC1 23 HOH C . ? HOH A 514 . ? 1_555 ? 22 AC1 23 HOH C . ? HOH A 531 . ? 1_555 ? 23 AC1 23 HOH C . ? HOH A 531 . ? 2_656 ? # _atom_sites.entry_id 7KVX _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011174 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001276 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012733 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027951 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 137 ? ? ? A . n A 1 2 GLY 2 138 ? ? ? A . n A 1 3 SER 3 139 ? ? ? A . n A 1 4 ALA 4 140 ? ? ? A . n A 1 5 PRO 5 141 ? ? ? A . n A 1 6 ALA 6 142 ? ? ? A . n A 1 7 GLU 7 143 ? ? ? A . n A 1 8 ILE 8 144 ? ? ? A . n A 1 9 SER 9 145 ? ? ? A . n A 1 10 ALA 10 146 ? ? ? A . n A 1 11 VAL 11 147 ? ? ? A . n A 1 12 CYS 12 148 ? ? ? A . n A 1 13 GLU 13 149 ? ? ? A . n A 1 14 LYS 14 150 ? ? ? A . n A 1 15 GLY 15 151 ? ? ? A . n A 1 16 ASN 16 152 152 ASN ASN A . n A 1 17 PHE 17 153 153 PHE PHE A . n A 1 18 ASN 18 154 154 ASN ASN A . n A 1 19 VAL 19 155 155 VAL VAL A . n A 1 20 ALA 20 156 156 ALA ALA A . n A 1 21 HIS 21 157 157 HIS HIS A . n A 1 22 GLY 22 158 158 GLY GLY A . n A 1 23 LEU 23 159 159 LEU LEU A . n A 1 24 ALA 24 160 160 ALA ALA A . n A 1 25 TRP 25 161 161 TRP TRP A . n A 1 26 SER 26 162 162 SER SER A . n A 1 27 TYR 27 163 163 TYR TYR A . n A 1 28 TYR 28 164 164 TYR TYR A . n A 1 29 ILE 29 165 165 ILE ILE A . n A 1 30 GLY 30 166 166 GLY GLY A . n A 1 31 TYR 31 167 167 TYR TYR A . n A 1 32 LEU 32 168 168 LEU LEU A . n A 1 33 ARG 33 169 169 ARG ARG A . n A 1 34 LEU 34 170 170 LEU LEU A . n A 1 35 ILE 35 171 171 ILE ILE A . n A 1 36 LEU 36 172 172 LEU LEU A . n A 1 37 PRO 37 173 173 PRO PRO A . n A 1 38 GLU 38 174 174 GLU GLU A . n A 1 39 LEU 39 175 175 LEU LEU A . n A 1 40 GLN 40 176 176 GLN GLN A . n A 1 41 ALA 41 177 177 ALA ALA A . n A 1 42 ARG 42 178 178 ARG ARG A . n A 1 43 ILE 43 179 179 ILE ILE A . n A 1 44 ARG 44 180 180 ARG ARG A . n A 1 45 THR 45 181 181 THR THR A . n A 1 46 TYR 46 182 182 TYR TYR A . n A 1 47 ASN 47 183 183 ASN ASN A . n A 1 48 GLN 48 184 184 GLN GLN A . n A 1 49 HIS 49 185 185 HIS HIS A . n A 1 50 TYR 50 186 186 TYR TYR A . n A 1 51 ASN 51 187 187 ASN ASN A . n A 1 52 ASN 52 188 188 ASN ASN A . n A 1 53 LEU 53 189 189 LEU LEU A . n A 1 54 LEU 54 190 190 LEU LEU A . n A 1 55 ARG 55 191 191 ARG ARG A . n A 1 56 GLY 56 192 192 GLY GLY A . n A 1 57 ALA 57 193 193 ALA ALA A . n A 1 58 VAL 58 194 194 VAL VAL A . n A 1 59 SER 59 195 195 SER SER A . n A 1 60 GLN 60 196 196 GLN GLN A . n A 1 61 ARG 61 197 197 ARG ARG A . n A 1 62 LEU 62 198 198 LEU LEU A . n A 1 63 TYR 63 199 199 TYR TYR A . n A 1 64 ILE 64 200 200 ILE ILE A . n A 1 65 LEU 65 201 201 LEU LEU A . n A 1 66 LEU 66 202 202 LEU LEU A . n A 1 67 PRO 67 203 203 PRO PRO A . n A 1 68 LEU 68 204 204 LEU LEU A . n A 1 69 ASP 69 205 205 ASP ASP A . n A 1 70 CYS 70 206 206 CYS CYS A . n A 1 71 GLY 71 207 207 GLY GLY A . n A 1 72 VAL 72 208 208 VAL VAL A . n A 1 73 PRO 73 209 209 PRO PRO A . n A 1 74 ASP 74 210 210 ASP ASP A . n A 1 75 ASN 75 211 211 ASN ASN A . n A 1 76 LEU 76 212 212 LEU LEU A . n A 1 77 SER 77 213 213 SER SER A . n A 1 78 MET 78 214 214 MET MET A . n A 1 79 ALA 79 215 215 ALA ALA A . n A 1 80 ASP 80 216 216 ASP ASP A . n A 1 81 PRO 81 217 217 PRO PRO A . n A 1 82 ASN 82 218 218 ASN ASN A . n A 1 83 ILE 83 219 219 ILE ILE A . n A 1 84 ARG 84 220 220 ARG ARG A . n A 1 85 PHE 85 221 221 PHE PHE A . n A 1 86 LEU 86 222 222 LEU LEU A . n A 1 87 ASP 87 223 223 ASP ASP A . n A 1 88 LYS 88 224 224 LYS LYS A . n A 1 89 LEU 89 225 225 LEU LEU A . n A 1 90 PRO 90 226 226 PRO PRO A . n A 1 91 GLN 91 227 227 GLN GLN A . n A 1 92 GLN 92 228 228 GLN GLN A . n A 1 93 THR 93 229 229 THR THR A . n A 1 94 GLY 94 230 230 GLY GLY A . n A 1 95 ASP 95 231 231 ASP ASP A . n A 1 96 ARG 96 232 232 ARG ARG A . n A 1 97 ALA 97 233 233 ALA ALA A . n A 1 98 GLY 98 234 234 GLY GLY A . n A 1 99 ILE 99 235 235 ILE ILE A . n A 1 100 LYS 100 236 236 LYS LYS A . n A 1 101 ASP 101 237 237 ASP ASP A . n A 1 102 ARG 102 238 238 ARG ARG A . n A 1 103 VAL 103 239 239 VAL VAL A . n A 1 104 TYR 104 240 240 TYR TYR A . n A 1 105 SER 105 241 241 SER SER A . n A 1 106 ASN 106 242 242 ASN ASN A . n A 1 107 SER 107 243 243 SER SER A . n A 1 108 ILE 108 244 244 ILE ILE A . n A 1 109 TYR 109 245 245 TYR TYR A . n A 1 110 GLU 110 246 246 GLU GLU A . n A 1 111 LEU 111 247 247 LEU LEU A . n A 1 112 LEU 112 248 248 LEU LEU A . n A 1 113 GLU 113 249 249 GLU GLU A . n A 1 114 ASN 114 250 250 ASN ASN A . n A 1 115 GLY 115 251 251 GLY GLY A . n A 1 116 GLN 116 252 252 GLN GLN A . n A 1 117 ARG 117 253 253 ARG ARG A . n A 1 118 ALA 118 254 254 ALA ALA A . n A 1 119 GLY 119 255 255 GLY GLY A . n A 1 120 THR 120 256 256 THR THR A . n A 1 121 CYS 121 257 257 CYS CYS A . n A 1 122 VAL 122 258 258 VAL VAL A . n A 1 123 LEU 123 259 259 LEU LEU A . n A 1 124 GLU 124 260 260 GLU GLU A . n A 1 125 TYR 125 261 261 TYR TYR A . n A 1 126 ALA 126 262 262 ALA ALA A . n A 1 127 THR 127 263 263 THR THR A . n A 1 128 PRO 128 264 264 PRO PRO A . n A 1 129 LEU 129 265 265 LEU LEU A . n A 1 130 GLN 130 266 266 GLN GLN A . n A 1 131 THR 131 267 267 THR THR A . n A 1 132 LEU 132 268 268 LEU LEU A . n A 1 133 PHE 133 269 269 PHE PHE A . n A 1 134 ALA 134 270 270 ALA ALA A . n A 1 135 MET 135 271 271 MET MET A . n A 1 136 SER 136 272 272 SER SER A . n A 1 137 GLN 137 273 273 GLN GLN A . n A 1 138 TYR 138 274 274 TYR TYR A . n A 1 139 SER 139 275 275 SER SER A . n A 1 140 GLN 140 276 276 GLN GLN A . n A 1 141 ALA 141 277 277 ALA ALA A . n A 1 142 GLY 142 278 278 GLY GLY A . n A 1 143 PHE 143 279 279 PHE PHE A . n A 1 144 SER 144 280 280 SER SER A . n A 1 145 ARG 145 281 281 ARG ARG A . n A 1 146 GLU 146 282 282 GLU GLU A . n A 1 147 ASP 147 283 283 ASP ASP A . n A 1 148 ARG 148 284 284 ARG ARG A . n A 1 149 LEU 149 285 285 LEU LEU A . n A 1 150 GLU 150 286 286 GLU GLU A . n A 1 151 GLN 151 287 287 GLN GLN A . n A 1 152 ALA 152 288 288 ALA ALA A . n A 1 153 LYS 153 289 289 LYS LYS A . n A 1 154 LEU 154 290 290 LEU LEU A . n A 1 155 PHE 155 291 291 PHE PHE A . n A 1 156 CYS 156 292 292 CYS CYS A . n A 1 157 ARG 157 293 293 ARG ARG A . n A 1 158 THR 158 294 294 THR THR A . n A 1 159 LEU 159 295 295 LEU LEU A . n A 1 160 GLU 160 296 296 GLU GLU A . n A 1 161 ASP 161 297 297 ASP ASP A . n A 1 162 ILE 162 298 298 ILE ILE A . n A 1 163 LEU 163 299 299 LEU LEU A . n A 1 164 ALA 164 300 300 ALA ALA A . n A 1 165 ASP 165 301 301 ASP ASP A . n A 1 166 ALA 166 302 302 ALA ALA A . n A 1 167 PRO 167 303 303 PRO PRO A . n A 1 168 GLU 168 304 304 GLU GLU A . n A 1 169 SER 169 305 305 SER SER A . n A 1 170 GLN 170 306 306 GLN GLN A . n A 1 171 ASN 171 307 307 ASN ASN A . n A 1 172 ASN 172 308 308 ASN ASN A . n A 1 173 CYS 173 309 309 CYS CYS A . n A 1 174 ARG 174 310 310 ARG ARG A . n A 1 175 LEU 175 311 311 LEU LEU A . n A 1 176 ILE 176 312 312 ILE ILE A . n A 1 177 ALA 177 313 313 ALA ALA A . n A 1 178 TYR 178 314 314 TYR TYR A . n A 1 179 GLN 179 315 315 GLN GLN A . n A 1 180 GLU 180 316 316 GLU GLU A . n A 1 181 PRO 181 317 317 PRO PRO A . n A 1 182 ALA 182 318 ? ? ? A . n A 1 183 ASP 183 319 ? ? ? A . n A 1 184 ASP 184 320 ? ? ? A . n A 1 185 SER 185 321 ? ? ? A . n A 1 186 SER 186 322 322 SER SER A . n A 1 187 PHE 187 323 323 PHE PHE A . n A 1 188 SER 188 324 324 SER SER A . n A 1 189 LEU 189 325 325 LEU LEU A . n A 1 190 SER 190 326 326 SER SER A . n A 1 191 GLN 191 327 327 GLN GLN A . n A 1 192 GLU 192 328 328 GLU GLU A . n A 1 193 VAL 193 329 329 VAL VAL A . n A 1 194 LEU 194 330 330 LEU LEU A . n A 1 195 ARG 195 331 331 ARG ARG A . n A 1 196 HIS 196 332 332 HIS HIS A . n A 1 197 LEU 197 333 333 LEU LEU A . n A 1 198 ARG 198 334 334 ARG ARG A . n A 1 199 GLN 199 335 335 GLN GLN A . n A 1 200 GLU 200 336 336 GLU GLU A . n A 1 201 GLU 201 337 ? ? ? A . n A 1 202 LYS 202 338 ? ? ? A . n A 1 203 GLU 203 339 ? ? ? A . n A 1 204 GLU 204 340 ? ? ? A . n A 1 205 VAL 205 341 ? ? ? A . n A 1 206 THR 206 342 ? ? ? A . n A 1 207 VAL 207 343 ? ? ? A . n A 1 208 GLY 208 344 ? ? ? A . n A 1 209 SER 209 345 ? ? ? A . n A 1 210 LEU 210 346 ? ? ? A . n A 1 211 LYS 211 347 ? ? ? A . n A 1 212 THR 212 348 ? ? ? A . n A 1 213 SER 213 349 ? ? ? A . n A 1 214 ALA 214 350 ? ? ? A . n A 1 215 VAL 215 351 ? ? ? A . n A 1 216 PRO 216 352 ? ? ? A . n A 1 217 SER 217 353 ? ? ? A . n A 1 218 THR 218 354 ? ? ? A . n A 1 219 SER 219 355 ? ? ? A . n A 1 220 THR 220 356 ? ? ? A . n A 1 221 MET 221 357 ? ? ? A . n A 1 222 SER 222 358 ? ? ? A . n A 1 223 GLN 223 359 ? ? ? A . n A 1 224 GLU 224 360 ? ? ? A . n A 1 225 PRO 225 361 ? ? ? A . n A 1 226 GLU 226 362 ? ? ? A . n A 1 227 LEU 227 363 ? ? ? A . n A 1 228 LEU 228 364 ? ? ? A . n A 1 229 ILE 229 365 ? ? ? A . n A 1 230 SER 230 366 ? ? ? A . n A 1 231 GLY 231 367 ? ? ? A . n A 1 232 MET 232 368 ? ? ? A . n A 1 233 GLU 233 369 ? ? ? A . n A 1 234 LYS 234 370 ? ? ? A . n A 1 235 PRO 235 371 ? ? ? A . n A 1 236 LEU 236 372 ? ? ? A . n A 1 237 PRO 237 373 ? ? ? A . n A 1 238 LEU 238 374 ? ? ? A . n A 1 239 ARG 239 375 ? ? ? A . n A 1 240 THR 240 376 ? ? ? A . n A 1 241 ASP 241 377 ? ? ? A . n A 1 242 PHE 242 378 ? ? ? A . n A 1 243 SER 243 379 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 X5J 1 401 401 X5J LIG A . C 3 HOH 1 501 14 HOH HOH A . C 3 HOH 2 502 29 HOH HOH A . C 3 HOH 3 503 5 HOH HOH A . C 3 HOH 4 504 36 HOH HOH A . C 3 HOH 5 505 39 HOH HOH A . C 3 HOH 6 506 21 HOH HOH A . C 3 HOH 7 507 3 HOH HOH A . C 3 HOH 8 508 10 HOH HOH A . C 3 HOH 9 509 9 HOH HOH A . C 3 HOH 10 510 1 HOH HOH A . C 3 HOH 11 511 35 HOH HOH A . C 3 HOH 12 512 25 HOH HOH A . C 3 HOH 13 513 19 HOH HOH A . C 3 HOH 14 514 33 HOH HOH A . C 3 HOH 15 515 44 HOH HOH A . C 3 HOH 16 516 38 HOH HOH A . C 3 HOH 17 517 18 HOH HOH A . C 3 HOH 18 518 24 HOH HOH A . C 3 HOH 19 519 34 HOH HOH A . C 3 HOH 20 520 13 HOH HOH A . C 3 HOH 21 521 15 HOH HOH A . C 3 HOH 22 522 43 HOH HOH A . C 3 HOH 23 523 45 HOH HOH A . C 3 HOH 24 524 27 HOH HOH A . C 3 HOH 25 525 32 HOH HOH A . C 3 HOH 26 526 46 HOH HOH A . C 3 HOH 27 527 26 HOH HOH A . C 3 HOH 28 528 31 HOH HOH A . C 3 HOH 29 529 16 HOH HOH A . C 3 HOH 30 530 11 HOH HOH A . C 3 HOH 31 531 4 HOH HOH A . C 3 HOH 32 532 6 HOH HOH A . C 3 HOH 33 533 20 HOH HOH A . C 3 HOH 34 534 8 HOH HOH A . C 3 HOH 35 535 22 HOH HOH A . C 3 HOH 36 536 12 HOH HOH A . C 3 HOH 37 537 41 HOH HOH A . C 3 HOH 38 538 23 HOH HOH A . C 3 HOH 39 539 40 HOH HOH A . C 3 HOH 40 540 37 HOH HOH A . C 3 HOH 41 541 2 HOH HOH A . C 3 HOH 42 542 7 HOH HOH A . C 3 HOH 43 543 30 HOH HOH A . C 3 HOH 44 544 42 HOH HOH A . C 3 HOH 45 545 28 HOH HOH A . C 3 HOH 46 546 17 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4400 ? 1 MORE -20 ? 1 'SSA (A^2)' 16020 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 85.4060634604 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 35.7770973945 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 527 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-06-02 2 'Structure model' 1 1 2021-06-09 3 'Structure model' 1 2 2023-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' diffrn_radiation_wavelength 7 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_diffrn_radiation_wavelength.wavelength' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 29.7099 _pdbx_refine_tls.origin_y 7.8942 _pdbx_refine_tls.origin_z 17.3516 _pdbx_refine_tls.T[1][1] 0.0251 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0003 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0310 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.0709 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0022 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.0503 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.8294 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.5541 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.1450 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.2521 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.2568 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.5076 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0290 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0507 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.0751 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0742 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0075 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.1295 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.0242 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0981 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0364 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 152 _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 401 _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.4 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0257 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 7KVX _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 305 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 501 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.03 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 167 ? ? -148.24 -67.96 2 1 ARG A 197 ? ? 75.11 138.85 3 1 GLN A 306 ? ? -107.47 47.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 137 ? A GLY 1 2 1 Y 1 A GLY 138 ? A GLY 2 3 1 Y 1 A SER 139 ? A SER 3 4 1 Y 1 A ALA 140 ? A ALA 4 5 1 Y 1 A PRO 141 ? A PRO 5 6 1 Y 1 A ALA 142 ? A ALA 6 7 1 Y 1 A GLU 143 ? A GLU 7 8 1 Y 1 A ILE 144 ? A ILE 8 9 1 Y 1 A SER 145 ? A SER 9 10 1 Y 1 A ALA 146 ? A ALA 10 11 1 Y 1 A VAL 147 ? A VAL 11 12 1 Y 1 A CYS 148 ? A CYS 12 13 1 Y 1 A GLU 149 ? A GLU 13 14 1 Y 1 A LYS 150 ? A LYS 14 15 1 Y 1 A GLY 151 ? A GLY 15 16 1 Y 1 A ALA 318 ? A ALA 182 17 1 Y 1 A ASP 319 ? A ASP 183 18 1 Y 1 A ASP 320 ? A ASP 184 19 1 Y 1 A SER 321 ? A SER 185 20 1 Y 1 A GLU 337 ? A GLU 201 21 1 Y 1 A LYS 338 ? A LYS 202 22 1 Y 1 A GLU 339 ? A GLU 203 23 1 Y 1 A GLU 340 ? A GLU 204 24 1 Y 1 A VAL 341 ? A VAL 205 25 1 Y 1 A THR 342 ? A THR 206 26 1 Y 1 A VAL 343 ? A VAL 207 27 1 Y 1 A GLY 344 ? A GLY 208 28 1 Y 1 A SER 345 ? A SER 209 29 1 Y 1 A LEU 346 ? A LEU 210 30 1 Y 1 A LYS 347 ? A LYS 211 31 1 Y 1 A THR 348 ? A THR 212 32 1 Y 1 A SER 349 ? A SER 213 33 1 Y 1 A ALA 350 ? A ALA 214 34 1 Y 1 A VAL 351 ? A VAL 215 35 1 Y 1 A PRO 352 ? A PRO 216 36 1 Y 1 A SER 353 ? A SER 217 37 1 Y 1 A THR 354 ? A THR 218 38 1 Y 1 A SER 355 ? A SER 219 39 1 Y 1 A THR 356 ? A THR 220 40 1 Y 1 A MET 357 ? A MET 221 41 1 Y 1 A SER 358 ? A SER 222 42 1 Y 1 A GLN 359 ? A GLN 223 43 1 Y 1 A GLU 360 ? A GLU 224 44 1 Y 1 A PRO 361 ? A PRO 225 45 1 Y 1 A GLU 362 ? A GLU 226 46 1 Y 1 A LEU 363 ? A LEU 227 47 1 Y 1 A LEU 364 ? A LEU 228 48 1 Y 1 A ILE 365 ? A ILE 229 49 1 Y 1 A SER 366 ? A SER 230 50 1 Y 1 A GLY 367 ? A GLY 231 51 1 Y 1 A MET 368 ? A MET 232 52 1 Y 1 A GLU 369 ? A GLU 233 53 1 Y 1 A LYS 370 ? A LYS 234 54 1 Y 1 A PRO 371 ? A PRO 235 55 1 Y 1 A LEU 372 ? A LEU 236 56 1 Y 1 A PRO 373 ? A PRO 237 57 1 Y 1 A LEU 374 ? A LEU 238 58 1 Y 1 A ARG 375 ? A ARG 239 59 1 Y 1 A THR 376 ? A THR 240 60 1 Y 1 A ASP 377 ? A ASP 241 61 1 Y 1 A PHE 378 ? A PHE 242 62 1 Y 1 A SER 379 ? A SER 243 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 X5J C4 C Y N 391 X5J C5 C Y N 392 X5J C6 C Y N 393 X5J C7 C Y N 394 X5J C8 C N N 395 X5J C10 C N N 396 X5J C13 C N N 397 X5J C15 C N R 398 X5J C17 C N R 399 X5J C20 C N R 400 X5J C1 C Y N 401 X5J C2 C Y N 402 X5J C3 C Y N 403 X5J C9 C N N 404 X5J C11 C N N 405 X5J C12 C N N 406 X5J C14 C N R 407 X5J C16 C N S 408 X5J C18 C N R 409 X5J C19 C N R 410 X5J N21 N Y N 411 X5J N22 N Y N 412 X5J N23 N Y N 413 X5J N24 N N N 414 X5J N25 N Y N 415 X5J N26 N N N 416 X5J N27 N N N 417 X5J N28 N N N 418 X5J O29 O N N 419 X5J O30 O N N 420 X5J O31 O N N 421 X5J O32 O N N 422 X5J O33 O N N 423 X5J O34 O N N 424 X5J O35 O N N 425 X5J O36 O N N 426 X5J O37 O N N 427 X5J P38 P N R 428 X5J P39 P N R 429 X5J S40 S N N 430 X5J S41 S N N 431 X5J H1 H N N 432 X5J H2 H N N 433 X5J H3 H N N 434 X5J H4 H N N 435 X5J H5 H N N 436 X5J H6 H N N 437 X5J H7 H N N 438 X5J H8 H N N 439 X5J H9 H N N 440 X5J H10 H N N 441 X5J H11 H N N 442 X5J H12 H N N 443 X5J H13 H N N 444 X5J H14 H N N 445 X5J H15 H N N 446 X5J H16 H N N 447 X5J H17 H N N 448 X5J H18 H N N 449 X5J H19 H N N 450 X5J H20 H N N 451 X5J H21 H N N 452 X5J H22 H N N 453 X5J H23 H N N 454 X5J H24 H N N 455 X5J H25 H N N 456 X5J H26 H N N 457 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 X5J S40 P38 sing N N 376 X5J O30 P38 doub N N 377 X5J P38 O32 sing N N 378 X5J P38 O36 sing N N 379 X5J C10 C15 sing N N 380 X5J C10 C14 sing N N 381 X5J O32 C12 sing N N 382 X5J C12 C14 sing N N 383 X5J N28 C15 sing N N 384 X5J N28 C6 sing N N 385 X5J C1 C6 sing Y N 386 X5J C1 C2 doub Y N 387 X5J C15 C11 sing N N 388 X5J C6 N22 doub Y N 389 X5J O36 C18 sing N N 390 X5J C14 C16 sing N N 391 X5J C2 N21 sing Y N 392 X5J N27 C9 sing N N 393 X5J N22 C3 sing Y N 394 X5J N21 C3 doub Y N 395 X5J C9 N26 sing N N 396 X5J C9 N24 doub N N 397 X5J N26 C8 sing N N 398 X5J N24 C7 sing N N 399 X5J C16 C11 sing N N 400 X5J C16 O35 sing N N 401 X5J C18 C19 sing N N 402 X5J C18 C20 sing N N 403 X5J O37 C19 sing N N 404 X5J C8 O29 doub N N 405 X5J C8 C5 sing N N 406 X5J C7 C5 doub Y N 407 X5J C7 N25 sing Y N 408 X5J C19 C17 sing N N 409 X5J C5 N23 sing Y N 410 X5J C20 N25 sing N N 411 X5J C20 O34 sing N N 412 X5J N25 C4 sing Y N 413 X5J O35 P39 sing N N 414 X5J N23 C4 doub Y N 415 X5J C17 O34 sing N N 416 X5J C17 C13 sing N N 417 X5J P39 O33 sing N N 418 X5J P39 O31 doub N N 419 X5J P39 S41 sing N N 420 X5J O33 C13 sing N N 421 X5J C4 H1 sing N N 422 X5J C10 H2 sing N N 423 X5J C10 H3 sing N N 424 X5J C13 H4 sing N N 425 X5J C13 H5 sing N N 426 X5J C15 H6 sing N N 427 X5J C17 H7 sing N N 428 X5J C20 H8 sing N N 429 X5J C1 H9 sing N N 430 X5J C2 H10 sing N N 431 X5J C3 H11 sing N N 432 X5J C11 H12 sing N N 433 X5J C11 H13 sing N N 434 X5J C12 H14 sing N N 435 X5J C12 H15 sing N N 436 X5J C14 H16 sing N N 437 X5J C16 H17 sing N N 438 X5J C18 H18 sing N N 439 X5J C19 H19 sing N N 440 X5J N26 H20 sing N N 441 X5J N27 H21 sing N N 442 X5J N27 H22 sing N N 443 X5J N28 H23 sing N N 444 X5J O37 H24 sing N N 445 X5J S40 H25 sing N N 446 X5J S41 H26 sing N N 447 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id X5J _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id X5J _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2R,5R,7R,8R,10R,12aR,14R,15aS,16R)-7-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-16-hydroxy-14-[(pyrimidin-4-yl)amino]-2,10-disulfanyldecahydro-2H,10H-5,8-methano-2lambda~5~,10lambda~5~-cyclopenta[l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione ; X5J 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4KSY _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #