HEADER BIOSYNTHETIC PROTEIN 29-NOV-20 7KW0 TITLE NON-RIBOSOMAL DIDOMAIN (STABILISED GLYCINE-PCP-C) ACCEPTOR BOUND STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PCP-C DIDOMAIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NON-RIBOSOMAL PEPTIDE SYNTHASE:AMINO ACID ADENYLATION; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOBIFIDA FUSCA; SOURCE 3 ORGANISM_TAXID: 269800; SOURCE 4 STRAIN: YX; SOURCE 5 ATCC: 27730; SOURCE 6 GENE: TFU_1867; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NRPS, C-DOMAIN, PCP-DOMAIN, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.IZORE,Y.T.C.HO,J.A.KACZMARSKI,A.GAVRIILIDOU,K.H.CHOW,D.STEER, AUTHOR 2 R.J.A.GOODE,R.B.SCHITTENHELM,J.TAILHADES,M.TOSIN,G.L.CHALLIS, AUTHOR 3 E.H.KRENSKE,N.ZIEMERT,C.J.JACKSON,M.J.CRYLE REVDAT 4 03-APR-24 7KW0 1 REMARK REVDAT 3 19-MAY-21 7KW0 1 JRNL REVDAT 2 21-APR-21 7KW0 1 COMPND SOURCE AUTHOR JRNL REVDAT 2 2 1 REMARK DBREF SEQRES LINK REVDAT 2 3 1 ATOM REVDAT 1 24-MAR-21 7KW0 0 JRNL AUTH T.IZORE,Y.T.CANDACE HO,J.A.KACZMARSKI,A.GAVRIILIDOU, JRNL AUTH 2 K.H.CHOW,D.L.STEER,R.J.A.GOODE,R.B.SCHITTENHELM,J.TAILHADES, JRNL AUTH 3 M.TOSIN,G.L.CHALLIS,E.H.KRENSKE,N.ZIEMERT,C.J.JACKSON, JRNL AUTH 4 M.J.CRYLE JRNL TITL STRUCTURES OF A NON-RIBOSOMAL PEPTIDE SYNTHETASE JRNL TITL 2 CONDENSATION DOMAIN SUGGEST THE BASIS OF SUBSTRATE JRNL TITL 3 SELECTIVITY. JRNL REF NAT COMMUN V. 12 2511 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33947858 JRNL DOI 10.1038/S41467-021-22623-0 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 95147 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 4859 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0400 - 5.9000 1.00 3232 182 0.1697 0.1916 REMARK 3 2 5.9000 - 4.6800 1.00 3125 153 0.1665 0.1907 REMARK 3 3 4.6800 - 4.0900 1.00 3102 131 0.1540 0.1660 REMARK 3 4 4.0900 - 3.7200 1.00 3039 190 0.1625 0.1617 REMARK 3 5 3.7200 - 3.4500 1.00 3039 152 0.1814 0.2019 REMARK 3 6 3.4500 - 3.2500 1.00 3028 166 0.1954 0.2040 REMARK 3 7 3.2500 - 3.0900 1.00 3038 136 0.1982 0.2482 REMARK 3 8 3.0900 - 2.9500 1.00 3032 168 0.1970 0.2308 REMARK 3 9 2.9500 - 2.8400 1.00 2987 162 0.1983 0.2197 REMARK 3 10 2.8400 - 2.7400 1.00 3019 167 0.2103 0.2421 REMARK 3 11 2.7400 - 2.6500 1.00 3040 132 0.1994 0.2370 REMARK 3 12 2.6500 - 2.5800 1.00 3006 139 0.2018 0.2215 REMARK 3 13 2.5800 - 2.5100 1.00 3016 123 0.1972 0.2386 REMARK 3 14 2.5100 - 2.4500 1.00 2987 185 0.1961 0.2467 REMARK 3 15 2.4500 - 2.3900 1.00 2999 142 0.1989 0.2412 REMARK 3 16 2.3900 - 2.3400 1.00 3033 148 0.1974 0.2328 REMARK 3 17 2.3400 - 2.3000 1.00 2950 174 0.2031 0.2205 REMARK 3 18 2.3000 - 2.2500 1.00 3007 152 0.2079 0.2237 REMARK 3 19 2.2500 - 2.2100 1.00 2962 199 0.2135 0.2544 REMARK 3 20 2.2100 - 2.1700 1.00 2984 184 0.2184 0.2897 REMARK 3 21 2.1700 - 2.1400 1.00 2929 194 0.2274 0.2622 REMARK 3 22 2.1400 - 2.1100 1.00 2928 194 0.2286 0.2470 REMARK 3 23 2.1100 - 2.0800 1.00 2938 180 0.2428 0.2518 REMARK 3 24 2.0800 - 2.0500 1.00 2992 169 0.2479 0.2974 REMARK 3 25 2.0500 - 2.0200 1.00 2974 168 0.2626 0.3046 REMARK 3 26 2.0200 - 1.9900 1.00 2967 155 0.2725 0.3004 REMARK 3 27 1.9900 - 1.9700 1.00 2986 169 0.2844 0.3076 REMARK 3 28 1.9700 - 1.9400 1.00 2980 154 0.2932 0.3031 REMARK 3 29 1.9400 - 1.9200 1.00 2994 137 0.2967 0.3514 REMARK 3 30 1.9200 - 1.9000 1.00 2975 154 0.3098 0.3541 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.215 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.439 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 8199 REMARK 3 ANGLE : 0.641 11225 REMARK 3 CHIRALITY : 0.042 1301 REMARK 3 PLANARITY : 0.004 1498 REMARK 3 DIHEDRAL : 19.945 2977 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2481 THROUGH 2550 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.2696 29.0692 -4.8732 REMARK 3 T TENSOR REMARK 3 T11: 0.4723 T22: 0.3919 REMARK 3 T33: 0.7890 T12: -0.0818 REMARK 3 T13: 0.1527 T23: -0.0398 REMARK 3 L TENSOR REMARK 3 L11: 0.0819 L22: 0.0487 REMARK 3 L33: 0.3417 L12: 0.0302 REMARK 3 L13: -0.0902 L23: 0.0684 REMARK 3 S TENSOR REMARK 3 S11: -0.0201 S12: -0.1998 S13: 0.2934 REMARK 3 S21: -0.0894 S22: -0.0159 S23: -0.0166 REMARK 3 S31: 0.0705 S32: 0.2103 S33: 0.0081 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2557 THROUGH 2938 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6458 39.6201 1.8021 REMARK 3 T TENSOR REMARK 3 T11: 0.2435 T22: 0.2623 REMARK 3 T33: 0.3176 T12: 0.0133 REMARK 3 T13: 0.0389 T23: 0.0500 REMARK 3 L TENSOR REMARK 3 L11: 1.1873 L22: 1.2377 REMARK 3 L33: 0.8992 L12: 0.0700 REMARK 3 L13: 0.2252 L23: 0.1960 REMARK 3 S TENSOR REMARK 3 S11: -0.0404 S12: -0.0551 S13: 0.1125 REMARK 3 S21: 0.1275 S22: -0.0118 S23: 0.1444 REMARK 3 S31: 0.0954 S32: -0.1420 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2939 THROUGH 2999) REMARK 3 ORIGIN FOR THE GROUP (A): -13.4241 44.1662 -16.1457 REMARK 3 T TENSOR REMARK 3 T11: 0.3535 T22: 0.3968 REMARK 3 T33: 0.4338 T12: 0.0243 REMARK 3 T13: -0.0330 T23: 0.1284 REMARK 3 L TENSOR REMARK 3 L11: 0.1594 L22: 0.1190 REMARK 3 L33: 0.1893 L12: 0.0344 REMARK 3 L13: -0.0053 L23: 0.0615 REMARK 3 S TENSOR REMARK 3 S11: -0.0858 S12: 0.2753 S13: 0.6550 REMARK 3 S21: -0.1733 S22: 0.0101 S23: 0.2117 REMARK 3 S31: -0.2663 S32: -0.0440 S33: 0.0044 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2481 THROUGH 2550 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.3153 -2.3409 12.7388 REMARK 3 T TENSOR REMARK 3 T11: 0.5158 T22: 0.3042 REMARK 3 T33: 0.3176 T12: -0.0047 REMARK 3 T13: 0.0719 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 0.0686 L22: 0.0342 REMARK 3 L33: 0.1876 L12: -0.0405 REMARK 3 L13: 0.0138 L23: 0.0286 REMARK 3 S TENSOR REMARK 3 S11: 0.0991 S12: -0.0722 S13: -0.1558 REMARK 3 S21: -0.0336 S22: 0.0626 S23: -0.1101 REMARK 3 S31: 0.0432 S32: -0.1424 S33: 0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2557 THROUGH 2938 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4979 -12.9663 -12.2839 REMARK 3 T TENSOR REMARK 3 T11: 0.2321 T22: 0.2798 REMARK 3 T33: 0.1999 T12: 0.0579 REMARK 3 T13: 0.0241 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.9449 L22: 1.3014 REMARK 3 L33: 0.9710 L12: 0.2290 REMARK 3 L13: -0.0590 L23: -0.2616 REMARK 3 S TENSOR REMARK 3 S11: -0.0217 S12: -0.0769 S13: 0.0089 REMARK 3 S21: 0.0542 S22: 0.0430 S23: 0.1284 REMARK 3 S31: -0.0982 S32: -0.0489 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2939 THROUGH 2999) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7552 -17.5049 -11.6086 REMARK 3 T TENSOR REMARK 3 T11: 0.2843 T22: 0.3843 REMARK 3 T33: 0.2762 T12: 0.0601 REMARK 3 T13: 0.0017 T23: 0.0572 REMARK 3 L TENSOR REMARK 3 L11: 0.2136 L22: 0.2558 REMARK 3 L33: 0.1815 L12: -0.0444 REMARK 3 L13: 0.0646 L23: -0.0467 REMARK 3 S TENSOR REMARK 3 S11: 0.0128 S12: -0.1513 S13: -0.2184 REMARK 3 S21: 0.0238 S22: -0.0424 S23: -0.1212 REMARK 3 S31: 0.1788 S32: 0.1630 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KW0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1000253259. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95246 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: MODEL FROM SAD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MAGNESIUM FORMATE, PH 7.4, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 52.65000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.95850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.75400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.95850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 52.65000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.75400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 2552 REMARK 465 GLN A 2553 REMARK 465 THR A 2554 REMARK 465 GLY A 2555 REMARK 465 ARG A 2556 REMARK 465 ALA A 3000 REMARK 465 GLY A 3001 REMARK 465 VAL A 3002 REMARK 465 GLU A 3003 REMARK 465 VAL A 3004 REMARK 465 VAL A 3005 REMARK 465 SER A 3006 REMARK 465 GLY A 3007 REMARK 465 ALA A 3008 REMARK 465 THR B 2554 REMARK 465 GLY B 2555 REMARK 465 ARG B 2556 REMARK 465 ALA B 3000 REMARK 465 GLY B 3001 REMARK 465 VAL B 3002 REMARK 465 GLU B 3003 REMARK 465 VAL B 3004 REMARK 465 VAL B 3005 REMARK 465 SER B 3006 REMARK 465 GLY B 3007 REMARK 465 ALA B 3008 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 3281 O HOH B 3470 2.11 REMARK 500 O ASP B 2778 O HOH B 3201 2.14 REMARK 500 O HOH A 3425 O HOH A 3427 2.16 REMARK 500 O HOH A 3386 O HOH A 3389 2.16 REMARK 500 OH TYR A 2484 O HOH A 3201 2.19 REMARK 500 O HOH A 3365 O HOH A 3400 2.19 REMARK 500 NH1 ARG A 2793 OE1 GLU A 2795 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A2499 57.54 -110.30 REMARK 500 ASP A2631 -55.54 140.84 REMARK 500 PRO A2675 37.34 -80.33 REMARK 500 ASN A2870 71.86 37.98 REMARK 500 LEU A2913 -35.07 76.93 REMARK 500 HIS A2958 62.90 -161.55 REMARK 500 ASP A2994 83.46 -157.16 REMARK 500 PRO B2675 39.81 -82.15 REMARK 500 ASP B2844 59.65 -103.62 REMARK 500 ASN B2870 73.19 34.09 REMARK 500 LEU B2913 -37.77 76.44 REMARK 500 ASP B2994 87.13 -150.35 REMARK 500 REMARK 500 REMARK: NULL DBREF 7KW0 A 2481 3008 UNP Q47NR9 Q47NR9_THEFY 2481 3008 DBREF 7KW0 B 2481 3008 UNP Q47NR9 Q47NR9_THEFY 2481 3008 SEQRES 1 A 528 VAL THR ALA TYR GLU GLU ILE VAL CYS GLN VAL PHE ALA SEQRES 2 A 528 ALA VAL LEU ASP ARG SER ASP VAL THR ALA ASP ALA ASP SEQRES 3 A 528 PHE PHE ALA LEU GLY GLY HIS SER LEU LEU SER LEU ARG SEQRES 4 A 528 VAL VAL ALA ARG LEU ARG ALA LEU LEU GLY VAL ASP VAL SEQRES 5 A 528 GLY VAL ARG ASP LEU PHE GLU ALA PRO THR PRO ALA ALA SEQRES 6 A 528 LEU ALA ALA ARG LEU THR THR GLN THR GLY ARG ARG PRO SEQRES 7 A 528 ALA VAL THR ARG ARG GLY PRO ASP ALA PRO PRO VAL LEU SEQRES 8 A 528 SER HIS PHE GLN ARG ARG LEU TRP LEU ILE GLU GLN VAL SEQRES 9 A 528 TYR GLN THR ARG GLY ALA TYR ASN VAL PRO LEU ALA VAL SEQRES 10 A 528 HIS VAL SER ASP ARG LEU ASP LEU ASP VAL LEU ARG ALA SEQRES 11 A 528 ALA VAL ARG ASP LEU VAL ALA ARG HIS GLU VAL LEU ARG SEQRES 12 A 528 THR LEU VAL ARG SER SER ASP ASP GLY PRO ASP PRO VAL SEQRES 13 A 528 LEU LEU ALA PRO GLU ASP ALA ALA VAL ASP VAL ALA GLU SEQRES 14 A 528 VAL GLN ALA ALA GLY PRO VAL ALA ASP LEU LEU ALA GLU SEQRES 15 A 528 LEU THR ALA GLN PRO PHE ASP LEU ALA THR GLN ILE PRO SEQRES 16 A 528 LEU ARG VAL ARG MET ILE THR GLY GLU GLN VAL ASP GLY SEQRES 17 A 528 CYS VAL LEU LEU LEU VAL CYS HIS HIS ILE ALA ALA ASP SEQRES 18 A 528 GLU TRP SER PHE ALA PRO LEU LEU ARG ASP LEU ASP THR SEQRES 19 A 528 ALA TYR ARG ALA ARG ALA ALA GLY ARG ALA PRO ASP TRP SEQRES 20 A 528 GLU PRO LEU PRO ALA GLN TYR SER ASP TYR ALA ALA THR SEQRES 21 A 528 LEU HIS ASP TRP LEU GLY GLU ALA THR ASP PRO ALA SER SEQRES 22 A 528 PRO LEU ARG ARG GLN LEU ASP TYR TRP GLN HIS ALA LEU SEQRES 23 A 528 GLN ASP LEU PRO ASP GLU LEU ASP LEU PRO THR ASP ARG SEQRES 24 A 528 PRO ARG PRO ALA THR ALA SER HIS ARG GLY GLY LEU ALA SEQRES 25 A 528 ARG ALA GLU LEU PRO PRO GLU LEU VAL GLU ALA VAL ARG SEQRES 26 A 528 ARG LEU ALA ALA GLN HIS GLY VAL THR VAL PHE MET VAL SEQRES 27 A 528 VAL GLN ALA ALA VAL ALA VAL LEU LEU HIS ARG LEU GLY SEQRES 28 A 528 ALA GLY ASP ASP ILE PRO LEU GLY SER PRO VAL ALA ASP SEQRES 29 A 528 ARG ALA ASP GLU ALA VAL HIS ASP THR VAL GLY PHE PHE SEQRES 30 A 528 LEU ASN THR LEU VAL LEU ARG VAL ASN LEU SER GLY ASN SEQRES 31 A 528 PRO THR PHE ALA ASP LEU LEU ASP ARG VAL ARG ALA VAL SEQRES 32 A 528 ASP LEU GLU ALA PHE ALA ARG ALA ASP ALA PRO PHE ASP SEQRES 33 A 528 ALA VAL VAL ASP THR VAL LYS PRO PRO ARG ALA VAL SER SEQRES 34 A 528 ARG HIS PRO LEU PHE GLN THR MET VAL SER TYR GLN ARG SEQRES 35 A 528 ARG PRO SER ASP VAL ASP ARG LEU PHE GLY ALA ALA THR SEQRES 36 A 528 ARG LEU VAL GLU VAL PRO LEU ASP THR ALA LYS PHE ASP SEQRES 37 A 528 LEU GLU PHE ALA PHE ILE GLU ASP GLY HIS GLY GLY ALA SEQRES 38 A 528 HIS ILE ALA LEU ASN TYR ALA ALA ASP LEU PHE ASP HIS SEQRES 39 A 528 ASP SER ALA GLU GLN LEU VAL ALA ARG LEU ARG THR VAL SEQRES 40 A 528 LEU GLU HIS ALA CYS ALA ASP PRO CYS ARG PRO VAL ALA SEQRES 41 A 528 GLY VAL GLU VAL VAL SER GLY ALA SEQRES 1 B 528 VAL THR ALA TYR GLU GLU ILE VAL CYS GLN VAL PHE ALA SEQRES 2 B 528 ALA VAL LEU ASP ARG SER ASP VAL THR ALA ASP ALA ASP SEQRES 3 B 528 PHE PHE ALA LEU GLY GLY HIS SER LEU LEU SER LEU ARG SEQRES 4 B 528 VAL VAL ALA ARG LEU ARG ALA LEU LEU GLY VAL ASP VAL SEQRES 5 B 528 GLY VAL ARG ASP LEU PHE GLU ALA PRO THR PRO ALA ALA SEQRES 6 B 528 LEU ALA ALA ARG LEU THR THR GLN THR GLY ARG ARG PRO SEQRES 7 B 528 ALA VAL THR ARG ARG GLY PRO ASP ALA PRO PRO VAL LEU SEQRES 8 B 528 SER HIS PHE GLN ARG ARG LEU TRP LEU ILE GLU GLN VAL SEQRES 9 B 528 TYR GLN THR ARG GLY ALA TYR ASN VAL PRO LEU ALA VAL SEQRES 10 B 528 HIS VAL SER ASP ARG LEU ASP LEU ASP VAL LEU ARG ALA SEQRES 11 B 528 ALA VAL ARG ASP LEU VAL ALA ARG HIS GLU VAL LEU ARG SEQRES 12 B 528 THR LEU VAL ARG SER SER ASP ASP GLY PRO ASP PRO VAL SEQRES 13 B 528 LEU LEU ALA PRO GLU ASP ALA ALA VAL ASP VAL ALA GLU SEQRES 14 B 528 VAL GLN ALA ALA GLY PRO VAL ALA ASP LEU LEU ALA GLU SEQRES 15 B 528 LEU THR ALA GLN PRO PHE ASP LEU ALA THR GLN ILE PRO SEQRES 16 B 528 LEU ARG VAL ARG MET ILE THR GLY GLU GLN VAL ASP GLY SEQRES 17 B 528 CYS VAL LEU LEU LEU VAL CYS HIS HIS ILE ALA ALA ASP SEQRES 18 B 528 GLU TRP SER PHE ALA PRO LEU LEU ARG ASP LEU ASP THR SEQRES 19 B 528 ALA TYR ARG ALA ARG ALA ALA GLY ARG ALA PRO ASP TRP SEQRES 20 B 528 GLU PRO LEU PRO ALA GLN TYR SER ASP TYR ALA ALA THR SEQRES 21 B 528 LEU HIS ASP TRP LEU GLY GLU ALA THR ASP PRO ALA SER SEQRES 22 B 528 PRO LEU ARG ARG GLN LEU ASP TYR TRP GLN HIS ALA LEU SEQRES 23 B 528 GLN ASP LEU PRO ASP GLU LEU ASP LEU PRO THR ASP ARG SEQRES 24 B 528 PRO ARG PRO ALA THR ALA SER HIS ARG GLY GLY LEU ALA SEQRES 25 B 528 ARG ALA GLU LEU PRO PRO GLU LEU VAL GLU ALA VAL ARG SEQRES 26 B 528 ARG LEU ALA ALA GLN HIS GLY VAL THR VAL PHE MET VAL SEQRES 27 B 528 VAL GLN ALA ALA VAL ALA VAL LEU LEU HIS ARG LEU GLY SEQRES 28 B 528 ALA GLY ASP ASP ILE PRO LEU GLY SER PRO VAL ALA ASP SEQRES 29 B 528 ARG ALA ASP GLU ALA VAL HIS ASP THR VAL GLY PHE PHE SEQRES 30 B 528 LEU ASN THR LEU VAL LEU ARG VAL ASN LEU SER GLY ASN SEQRES 31 B 528 PRO THR PHE ALA ASP LEU LEU ASP ARG VAL ARG ALA VAL SEQRES 32 B 528 ASP LEU GLU ALA PHE ALA ARG ALA ASP ALA PRO PHE ASP SEQRES 33 B 528 ALA VAL VAL ASP THR VAL LYS PRO PRO ARG ALA VAL SER SEQRES 34 B 528 ARG HIS PRO LEU PHE GLN THR MET VAL SER TYR GLN ARG SEQRES 35 B 528 ARG PRO SER ASP VAL ASP ARG LEU PHE GLY ALA ALA THR SEQRES 36 B 528 ARG LEU VAL GLU VAL PRO LEU ASP THR ALA LYS PHE ASP SEQRES 37 B 528 LEU GLU PHE ALA PHE ILE GLU ASP GLY HIS GLY GLY ALA SEQRES 38 B 528 HIS ILE ALA LEU ASN TYR ALA ALA ASP LEU PHE ASP HIS SEQRES 39 B 528 ASP SER ALA GLU GLN LEU VAL ALA ARG LEU ARG THR VAL SEQRES 40 B 528 LEU GLU HIS ALA CYS ALA ASP PRO CYS ARG PRO VAL ALA SEQRES 41 B 528 GLY VAL GLU VAL VAL SER GLY ALA HET XAG A3101 24 HET XAG B3101 24 HETNAM XAG N-{2-[(2-AMINOETHYL)SULFANYL]ETHYL}-N~3~-[(2R)-2- HETNAM 2 XAG HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA- HETNAM 3 XAG ALANINAMIDE FORMUL 3 XAG 2(C13 H28 N3 O7 P S) FORMUL 5 HOH *607(H2 O) HELIX 1 AA1 THR A 2482 ASP A 2497 1 16 HELIX 2 AA2 HIS A 2513 GLY A 2529 1 17 HELIX 3 AA3 GLY A 2533 ALA A 2540 1 8 HELIX 4 AA4 THR A 2542 LEU A 2550 1 9 HELIX 5 AA5 SER A 2572 TYR A 2585 1 14 HELIX 6 AA6 ASP A 2604 HIS A 2619 1 16 HELIX 7 AA7 GLU A 2620 LEU A 2622 5 3 HELIX 8 AA8 ALA A 2639 ALA A 2643 5 5 HELIX 9 AA9 PRO A 2655 GLN A 2666 1 12 HELIX 10 AB1 ILE A 2698 ALA A 2700 5 3 HELIX 11 AB2 ASP A 2701 TRP A 2703 5 3 HELIX 12 AB3 SER A 2704 ALA A 2721 1 18 HELIX 13 AB4 GLN A 2733 GLY A 2746 1 14 HELIX 14 AB5 SER A 2753 LEU A 2766 1 14 HELIX 15 AB6 PRO A 2797 GLY A 2812 1 16 HELIX 16 AB7 THR A 2814 LEU A 2830 1 17 HELIX 17 AB8 THR A 2872 ALA A 2889 1 18 HELIX 18 AB9 PRO A 2894 LYS A 2903 1 10 HELIX 19 AC1 ARG A 2929 ALA A 2933 5 5 HELIX 20 AC2 ASP A 2973 ASP A 2994 1 22 HELIX 21 AC3 THR B 2482 ASP B 2497 1 16 HELIX 22 AC4 HIS B 2513 GLY B 2529 1 17 HELIX 23 AC5 GLY B 2533 ALA B 2540 1 8 HELIX 24 AC6 THR B 2542 THR B 2552 1 11 HELIX 25 AC7 SER B 2572 TYR B 2585 1 14 HELIX 26 AC8 ASP B 2604 HIS B 2619 1 16 HELIX 27 AC9 GLU B 2620 LEU B 2622 5 3 HELIX 28 AD1 ALA B 2639 ALA B 2643 5 5 HELIX 29 AD2 PRO B 2655 GLN B 2666 1 12 HELIX 30 AD3 ILE B 2698 ALA B 2700 5 3 HELIX 31 AD4 ASP B 2701 TRP B 2703 5 3 HELIX 32 AD5 SER B 2704 ALA B 2721 1 18 HELIX 33 AD6 GLN B 2733 GLY B 2746 1 14 HELIX 34 AD7 SER B 2753 LEU B 2766 1 14 HELIX 35 AD8 PRO B 2797 GLY B 2812 1 16 HELIX 36 AD9 THR B 2814 LEU B 2830 1 17 HELIX 37 AE1 THR B 2872 ALA B 2889 1 18 HELIX 38 AE2 PRO B 2894 LYS B 2903 1 10 HELIX 39 AE3 ARG B 2929 ALA B 2933 5 5 HELIX 40 AE4 ASP B 2973 ASP B 2994 1 22 SHEET 1 AA1 5 VAL A2647 GLN A2651 0 SHEET 2 AA1 5 LEU A2676 THR A2682 1 O MET A2680 N VAL A2650 SHEET 3 AA1 5 CYS A2689 HIS A2696 -1 O LEU A2692 N ARG A2679 SHEET 4 AA1 5 ASN A2592 VAL A2599 -1 N VAL A2597 O LEU A2691 SHEET 5 AA1 5 THR A2935 VAL A2938 -1 O ARG A2936 N HIS A2598 SHEET 1 AA2 2 THR A2624 SER A2629 0 SHEET 2 AA2 2 GLY A2632 LEU A2637 -1 O VAL A2636 N LEU A2625 SHEET 1 AA3 4 GLY A2789 GLU A2795 0 SHEET 2 AA3 4 ALA A2961 ALA A2968 -1 O LEU A2965 N ALA A2792 SHEET 3 AA3 4 LEU A2949 GLU A2955 -1 N GLU A2950 O ASN A2966 SHEET 4 AA3 4 THR A2916 ARG A2922 1 N MET A2917 O PHE A2951 SHEET 1 AA4 2 ASP A2835 ALA A2843 0 SHEET 2 AA4 2 LEU A2858 ASN A2866 -1 O VAL A2865 N ILE A2836 SHEET 1 AA5 5 ASP B2646 GLN B2651 0 SHEET 2 AA5 5 LEU B2676 THR B2682 1 O MET B2680 N VAL B2650 SHEET 3 AA5 5 CYS B2689 HIS B2696 -1 O LEU B2692 N ARG B2679 SHEET 4 AA5 5 ASN B2592 VAL B2599 -1 N VAL B2597 O LEU B2691 SHEET 5 AA5 5 THR B2935 VAL B2938 -1 O ARG B2936 N HIS B2598 SHEET 1 AA6 2 THR B2624 SER B2628 0 SHEET 2 AA6 2 PRO B2633 LEU B2637 -1 O VAL B2636 N LEU B2625 SHEET 1 AA7 4 GLY B2789 GLU B2795 0 SHEET 2 AA7 4 ALA B2961 ALA B2968 -1 O LEU B2965 N ALA B2792 SHEET 3 AA7 4 LEU B2949 GLU B2955 -1 N ILE B2954 O HIS B2962 SHEET 4 AA7 4 THR B2916 ARG B2922 1 N GLN B2921 O PHE B2953 SHEET 1 AA8 2 ASP B2835 ALA B2843 0 SHEET 2 AA8 2 LEU B2858 ASN B2866 -1 O LEU B2863 N LEU B2838 LINK OG SER A2514 P05 XAG A3101 1555 1555 1.56 LINK OG SER B2514 P05 XAG B3101 1555 1555 1.56 CRYST1 105.300 105.508 107.917 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009497 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009478 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009266 0.00000